HHsearch alignment for GI: 254780624 and conserved domain: pfam08704

>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=99.28  E-value=2e-11  Score=93.76  Aligned_cols=110  Identities=19%  Similarity=0.279  Sum_probs=93.8

Q ss_pred             HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf             9985206446799779860233557777766413886327872133222211110000011222222222223334575-
Q gi|254780624|r   59 AMVTNLNPRKSKDYRVLDVAGGTGDVAFRIAEASDNRSQIVVADINNEMLSVGRDRAFKENLQDCITFIEANAETLPFE-  137 (265)
Q Consensus        59 ~~i~~l~~~~~~~~~iLDiGcGTG~~~~~l~~~~~~~~~v~giD~s~~Ml~~a~~r~~~~~~~~~i~~~~~da~~lp~~-  137 (265)
T Consensus        93 ~I~~~ldi~PG--~~VlEaGtGSGsLT~~Laravgp~G~v~t~E~~e~r~~~A~~n~~~~g~~~~v~~~~rDv~~~gf~~  170 (309)
T pfam08704        93 LIIMMLELKPG--SVVCESGTGSGSLSHAIARTVAPTGHLYTFEFHEQRADKAREEFREHGLDSLVTVTHRDVCKSGFDT  170 (309)
T ss_pred             HHHHHHCCCCC--CEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCC
T ss_conf             99998098999--9999836784299999999748886599984478999999999987498750588985200136664


Q ss_pred             --CCCCCCCEEEEEECCCHHHHHHHCCCCHHCC-CCCEEEE
Q ss_conf             --5446740366420132134432012100048-5211776
Q gi|254780624|r  138 --ANSFDACTLAFGIRNMPHITLVLQEIYRILK-CGGRLLV  175 (265)
Q Consensus       138 --d~sfD~V~~sf~l~~~~d~~~~l~e~~RvLK-pGG~~~i  175 (265)
T Consensus       171 ~~~~~~D~VfL-----Dlp~PW~ai~~~~~~Lk~~Gg~l~~  206 (309)
T pfam08704       171 EVSNKADAVFL-----DLPAPWEAIPHAAKALKVEGGRLCS  206 (309)
T ss_pred             CCCCCCCEEEE-----CCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             45664358997-----5899799889999860689968999