HHsearch alignment for GI: 254780625 and conserved domain: COG0099
>COG0099 RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis].
Probab=95.52 E-value=0.012 Score=37.05 Aligned_cols=48 Identities=25% Similarity=0.330 Sum_probs=39.5
Q ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 (289)
Q Consensus 166 ~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~ 222 (289)
T Consensus 14 ~v~iAL---t~IyGIG~~~a~~I~~~~gi~~~~r~~~Lteee------i~~ir~~i~ 61 (121)
T COG0099 14 RVVIAL---TYIYGIGRRRAKEICKKAGIDPDKRVGELTEEE------IERLRDAIQ 61 (121)
T ss_pred EEEEHH---HHHCCCCHHHHHHHHHHCCCCHHHHHCCCCHHH------HHHHHHHHH
T ss_conf 576504---630353699999999991988667645299999------999999998