HHsearch alignment for GI: 254780625 and conserved domain: TIGR03629

>TIGR03629 arch_S13P archaeal ribosomal protein S13P. This model describes exclusively the archaeal ribosomal protein S13P. It excludes the homologous eukaryotic 40S ribosomal protein S18 and bacterial 30S ribosomal protein S13.

Probab=95.35  E-value=0.023  Score=35.30  Aligned_cols=51  Identities=22%  Similarity=0.292  Sum_probs=40.9

Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             542100111265435641368999999871787783122220010158999999998788
Q gi|254780625|r  164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK  223 (289)
Q Consensus       164 ~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~~  223 (289)
T Consensus        16 ~K~v~~aL---t~I~GIG~~~A~~Ic~~~gid~~~k~~~Lt~~e------i~~i~~~i~~   66 (144)
T TIGR03629        16 NKPVEYAL---TGIKGIGRRFARAIARKLGVDPNAKLGYLDDEE------IEKLEEAVEN   66 (144)
T ss_pred             CCEEEEEE---EEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHH------HHHHHHHHHH
T ss_conf             96898872---212372899999999990999353604199999------9999999985