HHsearch alignment for GI: 254780625 and conserved domain: TIGR03631

>TIGR03631 bact_S13 30S ribosomal protein S13. This model describes bacterial ribosomal protein S13, to the exclusion of the homologous archaeal S13P and eukaryotic ribosomal protein S18. This model identifies some (but not all) instances of chloroplast and mitochondrial S13, which is of bacterial type.

Probab=95.10  E-value=0.025  Score=35.07  Aligned_cols=48  Identities=25%  Similarity=0.410  Sum_probs=38.8

Q ss_pred             CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             421001112654356413689999998717877831222200101589999999987
Q gi|254780625|r  165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI  221 (289)
Q Consensus       165 ~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i  221 (289)
T Consensus        11 K~v~~AL---t~I~GIG~~~A~~Ic~~lgId~~~k~g~Ls~~q------i~~I~~~I   58 (113)
T TIGR03631        11 KRVEIAL---TYIYGIGRTRARKILEKAGIDPDKRVKDLTEEE------LNAIREEI   58 (113)
T ss_pred             CCHHHHH---HCEECCCHHHHHHHHHHCCCCCCCCHHHCCHHH------HHHHHHHH
T ss_conf             6746065---200275899999999992999877864499999------99999999