HHsearch alignment for GI: 254780625 and conserved domain: pfam06677

>pfam06677 Auto_anti-p27 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27). This family consists of several Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) sequences. It is thought that the potential association of anti-p27 with anti-centromere antibodies suggests that autoantigen p27 might play a role in mitosis.
Probab=91.40  E-value=0.11  Score=30.92  Aligned_cols=26  Identities=27%  Similarity=0.814  Sum_probs=20.6

Q ss_pred             CCCCCCCCCCCEEEEEEECCCCEEECCCCC
Q ss_conf             877107877887899998781206387767
Q gi|254780625|r  259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ  288 (289)
Q Consensus       259 ~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQ  288 (289)
T Consensus        16 L~~~C-~~Cg~pLf~~k~g~---~~Cp~C~   41 (41)
T pfam06677        16 LDEHC-PKCGTPLFRLKDGK---VFCPSCE   41 (41)
T ss_pred             HHCCC-CCCCCEEEECCCCC---EECCCCC
T ss_conf             54325-45698305848999---9578779