HHsearch alignment for GI: 254780625 and conserved domain: pfam06677
>pfam06677 Auto_anti-p27 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27). This family consists of several Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) sequences. It is thought that the potential association of anti-p27 with anti-centromere antibodies suggests that autoantigen p27 might play a role in mitosis.
Probab=91.40 E-value=0.11 Score=30.92 Aligned_cols=26 Identities=27% Similarity=0.814 Sum_probs=20.6
Q ss_pred CCCCCCCCCCCEEEEEEECCCCEEECCCCC
Q ss_conf 877107877887899998781206387767
Q gi|254780625|r 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 (289)
Q Consensus 259 ~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQ 288 (289)
T Consensus 16 L~~~C-~~Cg~pLf~~k~g~---~~Cp~C~ 41 (41)
T pfam06677 16 LDEHC-PKCGTPLFRLKDGK---VFCPSCE 41 (41)
T ss_pred HHCCC-CCCCCEEEECCCCC---EECCCCC
T ss_conf 54325-45698305848999---9578779