HHsearch alignment of GI: 254780625 and MMDB domain: 1k82_A_226-268

>1k82_A (A:226-268) Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli}

Probab=99.48  E-value=2.1e-14  Score=112.22  Aligned_cols=43  Identities=51%  Similarity=1.057  Sum_probs=41.5

Q ss_pred             CCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf             78741331665738771078778878999987812063877679
Q gi|254780625|r  246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK  289 (289)
Q Consensus       246 ~g~~~~~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQk  289 (289)
                      +|+|++.++||+|+|+|| ++||++|++++++||+|||||.|||
T Consensus         1 pG~fq~~~~VygR~g~pC-~~Cg~~I~~~~~~~R~t~~Cp~CQk   43 (43)
T 1k82_A            1 PGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK   43 (43)
T ss_dssp             CCSCGGGCSSTTCTTSBC-TTTCCBCEEEEETTEEEEECTTTCC
T ss_pred             CCCCCCEEEEECCCCCCC-CCCCCEEEEEEECCCCCEECHHHCC
T ss_conf             777630368948798979-9999988999989974298932249