HHsearch alignment of GI: 254780625 and MMDB domain: 1tdh_A_156-364
>1tdh_A (A:156-364) NEI endonuclease VIII-like 1; helix two turns helix, zinc-LESS finger, hydrolase; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=245.95 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=98.3
Q ss_pred CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----
Q ss_conf 4542100111265435641368999999871787783122220010158999999998788767654218875531----
Q gi|254780625|r 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD---- 238 (289)
Q Consensus 163 ~~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~~vl~~a~~~gG~~~~~---- 238 (289)
++++||++||||++||||||||+|||||+|+|||++++++|++.+ +.+|+.+|+.||..+++.++.....
T Consensus 2 k~~pIk~~LLDQ~~iaGIGN~~~dEILf~A~IhP~~~~~~L~~~~------~~~L~~~i~~v~~~~~~~~~~~~~~~~~~ 75 (209)
T 1tdh_A 2 FDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEAL------QQHRPSPELTLSQKIRTKLQNPDLLELCH 75 (209)
T ss_dssp GGSBHHHHTTCTTTSTTCCHHHHHHHHHHHTCCTTSBHHHHHGGG------C-----CCSCHHHHHHHTTTSCCHHHHHH
T ss_pred CCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH------HCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 366288998447701566434899999982899666312345766------41344210002344344667899999999
Q ss_pred ---------------CCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf ---------------116778778741331665738771078778878999987812063877679
Q gi|254780625|r 239 ---------------YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 (289)
Q Consensus 239 ---------------~~~~~g~~g~~~~~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQk 289 (289)
+..+.+..++|+.+|+||+|.|++| ++|| +||+|||||.||+
T Consensus 76 ~v~~~~~~~~~~~l~~~r~~~~~~~~~~~~~vygr~g~~c-~~c~--------ggRtt~~CP~CQ~ 132 (209)
T 1tdh_A 76 SVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYGMPGMSS-LQDR--------HGRTIWFQGDPGP 132 (209)
T ss_dssp HHHHHHHHHHTTCTTSSCHHHHHHHHHHHCSSTTCTTCEE-EECT--------TSCEEEESSCCCT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCC-CCCC--------CCCEEEECCCCCC
T ss_conf 9999999808987658877776300341473417899824-5379--------9978986888866