HHsearch alignment of GI: 254780625 and MMDB domain: 2zkq_m_1-88
>2zkq_m (m:1-88) 40S ribosomal protein S18E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_M
Probab=96.40 E-value=0.0047 Score=39.29 Aligned_cols=50 Identities=18% Similarity=0.390 Sum_probs=40.5
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 54210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 (289)
Q Consensus 164 ~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~ 222 (289)
+.+|.-+| +.|-|||.-.|..||..++|+|..++++||++| +.+|-+.+.
T Consensus 23 ~K~i~~AL---t~I~GIG~~~A~~Ic~~lgi~~~~k~~~Lt~~q------i~~l~~~i~ 72 (88)
T 2zkq_m 23 RRKIAFAI---TAIKGVGRRYAHVVLRKADIDLTKRAGELTEDE------VERVITIMQ 72 (88)
T ss_dssp SSBHHHHG---GGSTTCCHHHHHHHHHHHTCCTTSBTTTSCHHH------HHHHHHHHH
T ss_pred CCEEEEEH---HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHH------HHHHHHHHH
T ss_conf 96873603---024662899999999982999543336399999------999999984