HHsearch alignment of GI: 254780625 and MMDB domain: 3a46_A_144-289

>3a46_A (A:144-289) Formamidopyrimidine-DNA glycosylase; helix two turns helix, zinc-LESS finger, hydrolase, THF, glycosidase, lyase, multifunctional enzyme; HET: DNA 3DR; 2.20A {Acanthamoeba polyphaga mimivirus} PDB: 3a45_A* 3a42_A
Probab=100.00  E-value=9.4e-43  Score=294.24  Aligned_cols=129  Identities=23%  Similarity=0.239  Sum_probs=121.5

Q ss_pred             HHHHHHHHCCCCCCCEEEECCCCC-CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             788874201454210011126543-5641368999999871787783122220010158999999998788767654218
Q gi|254780625|r  154 IYLTHQFHKKNSNLKNALLNQKIV-AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG  232 (289)
Q Consensus       154 ~~~~~~l~~~~~~Ik~~LlDQ~~i-aGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~~vl~~a~~~g  232 (289)
                      ++|.+.+++++++||++||||++| |||||||+|||||+|||||++++++|+++|      +.+|+++++.||..|++.|
T Consensus         1 e~~~~~l~~~~~~Ik~~LlDQ~~i~AGIGNiy~dEiLf~A~IhP~~~~~~Ls~~~------~~~L~~~i~~vl~~ai~~g   74 (146)
T 3a46_A            1 DIDISKIKKYKQPIVALLMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQE------IENLWYWIKYETKLAYDSN   74 (146)
T ss_dssp             CCCGGGGGGCCSBHHHHHHCSSSSCBCCCHHHHHHHHHHTTBCTTCBGGGCCHHH------HHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCHHCCCCHHH------HHHHHHHHHHHHHHHHHCC
T ss_conf             9999987542022346644367366485389999999975048334011099999------9999999999999999818


Q ss_pred             CCCCC------------CCCCCCCCCCCCHHHEEEECCCCCC--CCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf             87553------------1116778778741331665738771--078778878999987812063877679
Q gi|254780625|r  233 GSSLR------------DYVHIDGSIGYFQNAFSVYGKTGEP--CLSNCGQMIRRIVQAGRSTFYCTYCQK  289 (289)
Q Consensus       233 G~~~~------------~~~~~~g~~g~~~~~~~vy~r~g~~--C~~~CG~~I~~~~~~gR~ty~Cp~CQk  289 (289)
                      |+++.            +|.+.++.+|+++.+++||+|+|+|  | ++||++|++++++||+|||||.|||
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~vy~r~g~p~~C-~~Cg~~I~~~~~~gR~t~~CP~CQ~  144 (146)
T 3a46_A           75 HIGYMVNLENESSKIGRKNYHPNIHPTEKEFDFLVYRKKKDPNGN-KVIADKIIGSGKNKRTTYWAPAIQK  144 (146)
T ss_dssp             CSSSCGGGHHHHTTSCCCCCSTTCCCSCSSCCCSSTTCSBCTTSC-BCEEECCSCCTTCCCCEEECTTTCB
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC-CCCCCEEEEEECCCEEEEECCCCCC
T ss_conf             976410235665667873655565555664168997999998888-7469779997818813399936475