HHsearch results for GI: 254780625 and protein with PDBid: 1k3x_A
>1k3x_A Endonuclease VIII; hydrolase/DNA; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=100.00 E-value=0 Score=489.81 Aligned_cols=259 Identities=22% Similarity=0.426 Sum_probs=223.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 67643678898899986797788999648332657877899972898899996053089995035531001525532799
Q gi|254780625|r 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFI 81 (289)
Q Consensus 2 PElPEVe~~~~~l~~~l~g~~I~~V~~~~~~~~~~~~~~~~~~L~G~~I~~v~r~GK~l~l~l~~~~~L~~HlgM~G~~~ 81 (289)
|||||||++++.|++.+.|++|++|.+..+.. +.+.+.|.|++|++|+|+||||+|+||++.+|++||||+|+|+
T Consensus 1 PElPEVe~~~~~L~~~~~g~~I~~v~~~~~~~-----~~~~~~L~G~~i~~v~RrGK~l~~~l~~~~~L~~HLgMtG~~~ 75 (262)
T 1k3x_A 1 PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----KTYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWR 75 (262)
T ss_dssp CCHHHHHHHHHHHHHHHBTCCCSEEEESSGGG-----TTHHHHHTTCCEEEEEEETTEEEEEETTSCEEEEECTTTCEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCH-----HHHHHHCCCCEEEEEEECEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 97489999999999986898898999889855-----6589776998998999651388360478439997155433788
Q ss_pred EECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 81478542245876633899970688760489998158766410014553010053235655533221110678887420
Q gi|254780625|r 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 (289)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~R~fG~~~~~~~~~~~~~~~l~~lGpD~l~~~~~~~~~~~~l~ 161 (289)
+...+. .+.++.++.+.+.++.. ..+.|.|. .+.++.......++.+++||||||+++|+.+.|.+.+.
T Consensus 76 ~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~l~~lGpD~l~~~~~~~~~~~~l~ 144 (262)
T 1k3x_A 76 VVDTGE----EPQTTRVLRVKLQTADK---TILLYSAS----DIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLL 144 (262)
T ss_dssp EEETTC----CCCCSSCEEEEEECSSE---EEEEESCC----EEEEECTTHHHHSHHHHHCCCBTTCTTCCHHHHHHHHH
T ss_pred EECCCC----CCCCCEEEEEECCCCCE---EEEEECCC----EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 731434----55432034443056866---99997352----05995242300024898669987984776999999987
Q ss_pred C---CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 1---4542100111265435641368999999871787783122220010158999999998788767654218875531
Q gi|254780625|r 162 K---KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 (289)
Q Consensus 162 ~---~~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~~vl~~a~~~gG~~~~~ 238 (289)
. ++++||++||||++||||||||+|||||+|||||++++++||++| +.+|+++++.||..|++.+|++..+
T Consensus 145 ~~k~~~~~Ik~~LlDQ~~iaGIGNiya~EiLf~a~I~P~~~~~~Ls~~~------~~~L~~~i~~vl~~a~~~~g~~~~~ 218 (262)
T 1k3x_A 145 SPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLEIPRFSYATRGQVDEN 218 (262)
T ss_dssp STTTTTSCHHHHTTCTTTSBTCCHHHHHHHHHHHTCCSSCCGGGSCHHH------HHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 4002006899998417744565699999999872068545013444778------9999999999888785528665777
Q ss_pred CCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf 116778778741331665738771078778878999987812063877679
Q gi|254780625|r 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 (289)
Q Consensus 239 ~~~~~g~~g~~~~~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQk 289 (289)
+..|.+ ..++||+|+|+|| |+||++|++++++||+|||||.||-
T Consensus 219 -----~~~g~~-~~~~Vy~r~g~~C-~~Cg~~I~~~~~~~R~t~~Cp~CQh 262 (262)
T 1k3x_A 219 -----KHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQH 262 (262)
T ss_dssp ---------CC-CCCSSTTCTTSBC-TTTCCBCEEEEETTEEEEECTTTCC
T ss_pred -----CCCCCE-EEEEEECCCCCCC-CCCCCEEEEEEECCCCCEECCCCCC
T ss_conf -----888854-6788926596979-9999889999989981488745359