HHsearch results for GI: 254780625 and protein with PDBid: 2vqe_M
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=95.40 E-value=0.0083 Score=36.71 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=40.2
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 54210011126543564136899999987178778312222001015899999999878
Q gi|254780625|r 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 (289)
Q Consensus 164 ~~~Ik~~LlDQ~~iaGIGN~y~~EiLf~a~I~P~~~~~~Ls~~e~~~~~~~~~L~~~i~ 222 (289)
+.+|.-+| +.|=|||.-.|..||..++|+|..++.+||++| +..|-+.+.
T Consensus 12 ~K~v~~aL---t~I~GIG~~~A~~Ic~~lGId~~~kvg~Lt~~q------i~~l~~~i~ 61 (126)
T 2vqe_M 12 NKRVDVAL---TYIYGIGKARAKEALEKTGINPATRVKDLTEAE------VVRLREYVE 61 (126)
T ss_dssp SSBHHHHH---TTSSSCCSHHHHHHTTTTTCCTTSBGGGCCHHH------HHHHHHHHH
T ss_pred CCEEEEEE---CCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHH------HHHHHHHHH
T ss_conf 97878762---043483899999999985979663016399999------999999983