HHSEARCH alignment of GI: 254780625 and SCOP domain: d1k3xa3

Alignment

Probab=99.18  E-value=3.2e-12  Score=95.60  Aligned_cols=37  Identities=35%  Similarity=0.970  Sum_probs=35.0

Q ss_pred             HEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCC
Q ss_conf             31665738771078778878999987812063877679
Q gi|254780625|r  252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK  289 (289)
Q Consensus       252 ~~~vy~r~g~~C~~~CG~~I~~~~~~gR~ty~Cp~CQk  289 (289)
                      .|+||+|+|+|| ++||++|.++.++||+|||||.||-
T Consensus         4 ~~~VYgR~g~pC-~~C~~~I~~~~~~gR~t~~Cp~CQ~   40 (40)
T d1k3xa3           4 RFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQH   40 (40)
T ss_dssp             CCSSTTCTTSBC-TTTCCBCEEEEETTEEEEECTTTCC
T ss_pred             EEEEECCCCCCC-CCCCCEEEEEEECCCCCEECHHHCC
T ss_conf             778708897826-8698889899988997788956588

SCOP domain information

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: C-terminal, Zn-finger domain of MutM-like DNA repair proteins
domain: Endonuclease VIII
species: Escherichia coli [TaxId: 562]