BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780625|ref|YP_003065038.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] (289 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780625|ref|YP_003065038.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040302|gb|ACT57098.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] Length = 289 Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL Sbjct: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR Sbjct: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI Sbjct: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV Sbjct: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK Sbjct: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 >gi|315121826|ref|YP_004062315.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495228|gb|ADR51827.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 295 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/292 (75%), Positives = 254/292 (86%), Gaps = 3/292 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNL+ VMKNM +TDI LHRKNLRFDFP +F+ RGKKI +V RRAKYL Sbjct: 4 MPELPEVEIIRRNLIPVMKNMILTDIWLHRKNLRFDFPPNFALNVRGKKITNVVRRAKYL 63 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LIELE NLSII HLGMSGSFIIE TS K IK+P+HNHVTISL+N T+KYRVIYN Sbjct: 64 LIELEDNLSIIAHLGMSGSFIIEDTSSTNSQKKIKDPRHNHVTISLSNEDKTQKYRVIYN 123 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFMDLV+TSL+ QYP L +GPEP D++FNA YLTHQF+K+NSNLKNALLNQ+IV Sbjct: 124 DPRRFGFMDLVKTSLRDQYPSLIKIGPEPTDSAFNATYLTHQFYKRNSNLKNALLNQRIV 183 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRA++SP+R +SL+Q+N TP + + +LIQEIQKV+ DAI+AGGSSLR Sbjct: 184 AGLGNIYVCEALWRARISPVRTAKSLVQDNKTPNEKISRLIQEIQKVITDAINAGGSSLR 243 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYVH DGSIG FQN+F+VYGKTG+ C SNCGQMIRRIVQ+GRSTFYCTYCQ+ Sbjct: 244 DYVHTDGSIGSFQNSFAVYGKTGKSCPSNCGQMIRRIVQSGRSTFYCTYCQE 295 >gi|159184256|ref|NP_353352.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] gi|22001592|sp|Q8UIH4|FPG_AGRT5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159139583|gb|AAK86137.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] Length = 298 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 154/300 (51%), Positives = 195/300 (65%), Gaps = 13/300 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ V + L R +LRF FP F+ GK II + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP----------IKNPQHNHVTISLTNNTNTK 110 LIELE L+I+ HLGMSGSF IE K+ +H+HV L + + Sbjct: 61 LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHL--DKGEE 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK+ Sbjct: 119 RVCVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKST 178 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QKI+AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DAI Sbjct: 179 LLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIA 238 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD++ DG++GYFQ++FSVY + G+PC + CG + R+VQAGRSTFYC CQK Sbjct: 239 AGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298 >gi|325291755|ref|YP_004277619.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] gi|325059608|gb|ADY63299.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] Length = 311 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/302 (50%), Positives = 196/302 (64%), Gaps = 15/302 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + L R +LRF FP F+ G+ II + RRAKYL Sbjct: 12 MPELPEVETVRRGLAPTMEGARIRKLHLGRPDLRFPFPEDFAGLIEGRTIISLGRRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP------------QHNHVTISLTNNTN 108 LIELE L+I+ HLGMSGSF IE + +N +H+HV L + Sbjct: 72 LIELEDGLTIVAHLGMSGSFRIEAAADEAGNRNAPGAFHYARSKDGKHDHVVFHL--DKG 129 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 ++ VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK Sbjct: 130 EERICVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFQGKSQPLK 189 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + LL+QK++AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DA Sbjct: 190 STLLDQKVIAGLGNIYVCEALWRAHLSPLRAAGTLVTKTGEPKPELINLTEKIRDVIADA 249 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYC 287 I AGGSSLRD++ DG++GYFQ++FSVY + G+PC + CG + RIVQAGRSTFYC C Sbjct: 250 IAAGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERIVQAGRSTFYCAAC 309 Query: 288 QK 289 QK Sbjct: 310 QK 311 >gi|190890023|ref|YP_001976565.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 652] gi|238692544|sp|B3PZ93|FPG_RHIE6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190695302|gb|ACE89387.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CIAT 652] Length = 296 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 193/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH-TSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + A P K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEEGAASAMPGEFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C + CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|209551935|ref|YP_002283852.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238066646|sp|B5ZYK9|FPG_RHILW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209537691|gb|ACI57626.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 301 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/303 (49%), Positives = 192/303 (63%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVAKLELRRGDLRFPFPDAFADRVSGRTIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH------TSCAKP-------IKNPQHNHVTISLTNNT 107 L++L+ ++I HLGMSGSF IE A P K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGRIEEGAGAATPGEFHHARSKDEKHDHVVFHLESPA 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K L Sbjct: 121 GPR--RVVYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRHKAQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K+ALL+QK +AG+GNIYVCEALWRA LSPIR +L G PK+ L L+ I+ V+ D Sbjct: 179 KSALLDQKNIAGLGNIYVCEALWRAHLSPIRAAGTLATAGGRPKEQLNLLVASIRDVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSLRD++ DGS+GYFQ++FSVY + G+ C + CG + RIVQAGRSTFYC Sbjct: 239 AITAGGSSLRDHIQTDGSLGYFQHSFSVYDREGQACRTPGCGGTVARIVQAGRSTFYCAT 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|15964118|ref|NP_384471.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|307301263|ref|ZP_07581025.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] gi|307317934|ref|ZP_07597371.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|7404366|sp|Q59752|FPG_RHIME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15073294|emb|CAC41802.1| Probable formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|306896336|gb|EFN27085.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|306903719|gb|EFN34306.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] Length = 301 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 153/303 (50%), Positives = 193/303 (63%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F+ A G++II +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFANAVAGRRIIALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPI----------KNPQHNHVTISLTNNT 107 +IELEG II HLGMSGSF IE + A P K+ +H+HV L + Sbjct: 61 MIELEGGDVIIAHLGMSGSFRIEKGPIEAGADPATPGAFHHPRGKDEKHDHVVFHLDGGS 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 RVIYNDPRRFGFMDL S + LR LG EP N+ +A YL +F K L Sbjct: 121 GPA--RVIYNDPRRFGFMDLARRSALADHVFLRGLGEEPTGNALDAAYLATRFAGKIQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L + I+ V+ D Sbjct: 179 KAALLDQRTIAGLGNIYVCEALWRSGLSPKRSAGTLVDKRGRPKQALIALTERIRAVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSL+D++ DGS+GYFQ++FSVY + GE C + C + RIVQAGRSTFYC + Sbjct: 239 AIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFYCPH 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|116250141|ref|YP_765979.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|166198738|sp|Q1MMD9|FPG_RHIL3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115254789|emb|CAK05863.1| putative formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 296 Score = 298 bits (764), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 193/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASGVPGEFHHARSKDEKHDHVVFHLQAASGLR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N +A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVGRADLATHPFFRDLGPEPTGNELSAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTAGGRPKAQLDLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + + C + CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|227824215|ref|YP_002828188.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] gi|254789447|sp|C3MCY7|FPG_RHISN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227343217|gb|ACP27435.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] Length = 296 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 147/300 (49%), Positives = 194/300 (64%), Gaps = 15/300 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L ++ + L R +LRF FP +F+AA G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPAIEGALLVRAELRRPDLRFPFPENFAAAVSGRRILALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----------KNPQHNHVTISLTNNTNTK 110 +I+LEG I+ HLGMSGSF IE + A+P K+ +H+HV L + Sbjct: 61 MIDLEGGDVIVAHLGMSGSFRIE--AGAQPAAPGEFHHPRGKDEKHDHVIFHLDGGSG-- 116 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + RVIYNDPRRFGFMDL ++ R LG EP N+ +A YL + K+ LK A Sbjct: 117 QMRVIYNDPRRFGFMDLARRDTIAEHAYFRDLGEEPTGNALDAAYLAARLAGKSQPLKTA 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L++ I+ V+ DAI Sbjct: 177 LLDQRTIAGLGNIYVCEALWRSGLSPNRAAGTLVDKRGRPKQALLALVEAIRAVIADAIA 236 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSL+D++ DGS+GYFQ+AFSVY + GE C C + RIVQAGRSTF+C CQK Sbjct: 237 AGGSSLKDHIQADGSLGYFQHAFSVYDRAGEACRKPGCDGTVTRIVQAGRSTFHCPRCQK 296 >gi|241207318|ref|YP_002978414.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861208|gb|ACS58875.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 296 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 147/298 (49%), Positives = 190/298 (63%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAVSGMPGEFHHARSKDEKHDHVVFHLQGLGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWRA LSPIR +L+ G PK L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRAHLSPIRAAGTLVTPGGRPKAQLDLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FS Y + + C + CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSAYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|150398756|ref|YP_001329223.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] gi|166198753|sp|A6UFF8|FPG_SINMW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150030271|gb|ABR62388.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] Length = 306 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 150/308 (48%), Positives = 189/308 (61%), Gaps = 21/308 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F A G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFEDAVAGRRIVALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPI----------KNPQHNHVTIS 102 IELEG II HLGMSGSF IE A P K+ +H+HV Sbjct: 61 TIELEGGDVIIAHLGMSGSFRIEFDGPGEGRIKESADPAVPGDFHRPRSKDEKHDHVVFH 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + + RVIYNDPRRFGFM L ++ LR LG EP N+ +A YL +F Sbjct: 121 L--DASCGPARVIYNDPRRFGFMALARREALAEHVFLRGLGEEPTGNALDAAYLAARFSG 178 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K LK ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ PK L +L I+ Sbjct: 179 KAQPLKAALLDQRTIAGLGNIYVCEALWRSGLSPKRAAGTLVDKRARPKQALVQLTDAIR 238 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRST 281 V+ DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C S C + RIVQAGRST Sbjct: 239 AVIADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTSGCRGTVERIVQAGRST 298 Query: 282 FYCTYCQK 289 FYC +CQK Sbjct: 299 FYCPHCQK 306 >gi|86356012|ref|YP_467904.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CFN 42] gi|123513260|sp|Q2KDA9|FPG_RHIEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86280114|gb|ABC89177.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CFN 42] Length = 296 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 149/298 (50%), Positives = 195/298 (65%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVTRLELRRRDLRFPFPDALAERVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH-TSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + A P K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASAMPGEFHHARSKDEKHDHVVFHLEGGGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDIVGRADLSAHPFFRDLGPEPTGNELGATYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ + G PK L L+ I++V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTSGGRPKQQLDLLVASIREVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C + CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIRADGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|121602138|ref|YP_989473.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] gi|166215609|sp|A1UU20|FPG_BARBK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120614315|gb|ABM44916.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] Length = 291 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 154/296 (52%), Positives = 193/296 (65%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLMGSRIISVSLGCKNLRFPFPESFSERLTGRIIIKLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ +E H+ K + H+H +S TN K YR Sbjct: 61 LFHLSQNETIVSHLGMSGSWRVEDDLLRKKHSYMGKLVA---HDHFIMSF-QATNGKIYR 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 +IYND RRFGFM L +T Y++P LR LG EP DN+ + YL F K ++LK ALL+ Sbjct: 117 LIYNDSRRFGFMLLADTMRLYEHPLLRNLGLEPIDNAVSGAYLQKAFINKKTSLKAALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAG+GNIYVCEALWR+ LSP R+ +L + ++ L Q I V+ +AI +GG Sbjct: 177 QSIVAGLGNIYVCEALWRSYLSPERRALTLASKSAHACELAKCLAQNICDVISEAIFSGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRDYVHIDGS+GYFQ+ FSVYG+ G+ C S CG I RIVQ+GRS+FYC CQK Sbjct: 237 SSLRDYVHIDGSLGYFQHCFSVYGREGKEC-SRCGMHIVRIVQSGRSSFYCPQCQK 291 >gi|304392447|ref|ZP_07374388.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] gi|303295551|gb|EFL89910.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] Length = 297 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 198/298 (66%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L VM+ + + L R +LRF FP F+ A++ ++I +SRRAKYL Sbjct: 1 MPELPEVETVRGGLAPVMEGAVIDRLELRRPDLRFPFPDDFANASQNRRIEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L++L+ +I+HLGMSGSF +E ++ A+P ++ +H+HVT LT T +K Sbjct: 61 LMDLDDGTVVIMHLGMSGSFRTLEGSAEAQPGNFHHEKSRDEKHDHVTFHLTTATG-EKA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFM S +P +LG EP N+ +A Y+ + KN +K ALL Sbjct: 120 RVVYNDPRRFGFMLSTPRSELDVHPSFASLGVEPVGNALDADYVAGKLADKNVPMKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QKI+AG+GNIYVCEALWRA+LSP RK R+L+Q +G P L +L+ I+ V+ DAI AG Sbjct: 180 DQKIIAGLGNIYVCEALWRARLSPRRKARTLVQKSGRPTPRLEELVVHIRNVIADAIKAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ DG++GYFQ+ F+ Y + G+ C C I RIVQ+GRSTFYC CQ+ Sbjct: 240 GSTLRDHAATDGTLGYFQHTFAAYDQEGQDCQRVECSGTITRIVQSGRSTFYCPRCQR 297 >gi|240849911|ref|YP_002971300.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] gi|240267034|gb|ACS50622.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] Length = 291 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 194/293 (66%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+ II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVVTDAKIVSVRLNRRDLRFPFPEAFSERLIGRTIIELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE+ T + K +H+H + + + + Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTVFSTTSKLIKHDHFVMDIQTR-DGEVYHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV T Y++P L LG EP NSF+ YL F K +LK+ LL+Q I Sbjct: 120 NDVRRFGFMLLVNTDKLYEHPLLNKLGLEPMSNSFSGRYLQKAFVNKKMSLKSVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L + L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTARACEFADSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+HIDGS+GYFQ+AFSVYG+ G+ CL CG I RI+QAGRS+FYC+ CQK Sbjct: 240 RDYMHIDGSLGYFQHAFSVYGREGKQCL-ECGTPIVRILQAGRSSFYCSQCQK 291 >gi|222084647|ref|YP_002543176.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] gi|221722095|gb|ACM25251.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] Length = 279 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 137/280 (48%), Positives = 184/280 (65%), Gaps = 11/280 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + L R +LRF FP FS G+ I +SRRAKYLLI+L+ ++II HLGMS Sbjct: 1 MEGAVLAALELRRNDLRFPFPAEFSRLASGRGITSLSRRAKYLLIDLDDGMTIIAHLGMS 60 Query: 78 GSFIIEHTSCAKP--------IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF +E + A+ K+ +H+HV LT RVIYNDPRRFGFMD+ Sbjct: 61 GSFRVETGAVAETPGEFHHPRSKDEKHDHVIFHLTGANGPA--RVIYNDPRRFGFMDIAR 118 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P R LGPEP N+ +A YL +F K LK+ALL+QK +AG+GNIYVCEAL Sbjct: 119 RADLGSHPSFRDLGPEPTGNTLSADYLAERFSGKAQPLKSALLDQKNIAGLGNIYVCEAL 178 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WR+ LSP+R SL+ G P + L +L++ I++V+ DAI AGGSSLRD++ DGS+GYF Sbjct: 179 WRSHLSPVRAAGSLVTQAGRPSEELLRLVEAIREVIADAIAAGGSSLRDHIQTDGSLGYF 238 Query: 250 QNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 Q++FSVY + +PC + CG + RIVQ+GRS+FYC CQ Sbjct: 239 QHSFSVYDREAQPCGTPGCGGTVARIVQSGRSSFYCASCQ 278 >gi|163867542|ref|YP_001608741.1| formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] gi|189044583|sp|A9IN26|FPG_BART1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161017188|emb|CAK00746.1| Formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] Length = 291 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 144/293 (49%), Positives = 196/293 (66%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+KI+++ RRAKYL Sbjct: 1 MPELPEVETVRRGLESVVTDAKIVSVQLNRRDLRFPFPEAFSERLIGRKILELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH----TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE+ T+ + K +H+H + + N Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTAFSMTSKLVKHDHFIMDIQTR-NGDVYHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV+T Y++P L LG EP + F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLVDTDKLYKHPLLNKLGLEPMSHGFSGRYLQKAFVNKKVSLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTVYARELANSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H+DGS+GYFQ+AFSVYG+ G+ CL CG I RI+Q+GRS+FYC+ CQK Sbjct: 240 RDYMHVDGSLGYFQHAFSVYGREGKECL-QCGTPIIRILQSGRSSFYCSQCQK 291 >gi|163757770|ref|ZP_02164859.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] gi|162285272|gb|EDQ35554.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] Length = 320 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 139/300 (46%), Positives = 190/300 (63%), Gaps = 14/300 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PELPEVE +RR L VM+ + + R +LRF FP F+ G++II + RRAKYL Sbjct: 23 LPELPEVETVRRGLQPVMEGARIIRVEQRRADLRFPFPEDFAKRLEGRQIIALGRRAKYL 82 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----------KNPQHNHVTISLTNNTNTK 110 L + + + +I HLGMSGSF IE P+ K+ +H+HV + Sbjct: 83 LADFDDGMVLISHLGMSGSFRIE-PDGDSPLTPGVFHHERSKDDKHDHVVFHIDGPAG-- 139 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + RVIYNDPRRFG+MDL+ + ++P R+LG EP NS A L + K + LK A Sbjct: 140 RARVIYNDPRRFGYMDLMVRAELAEHPWFRSLGVEPTGNSLEADELARRLAGKAAPLKAA 199 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+I+AG+GNIYVCEALWRA+LSP + L+ G P+ L +L +I++V+ +AI Sbjct: 200 LLDQRIIAGLGNIYVCEALWRARLSPRKPAGRLVTKAGQPRKALERLTGDIREVISEAIA 259 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD++ DG++GYFQ+ FSVY + G+ C CG +RRIVQ+GRSTF C CQK Sbjct: 260 AGGSSLRDHIQTDGTLGYFQHGFSVYDREGKACPRPGCGDTVRRIVQSGRSTFMCARCQK 319 >gi|222147314|ref|YP_002548271.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] gi|254789428|sp|B9JZF5|FPG_AGRVS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221734304|gb|ACM35267.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] Length = 297 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 193/298 (64%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + L R +LRF P F+A T+G+ I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPSMEGRRLTRLELRRTDLRFPLPVDFAARTQGRLIVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT-SCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 LI+L+ +SI+ HLGMSGS+ IE P ++ +H+HV L+ Sbjct: 61 LIDLDDGVSIVSHLGMSGSYRIEAANETGLPGQFHMARSRDEKHDHVIFHLSG-PEGDPL 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE ++ LGPEP N+ +A YL +F K LK ALL Sbjct: 120 RVIYNDPRRFGFMDMVERRHMDRHAAFAGLGPEPVGNALDADYLAFRFKGKAQPLKTALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GNIYVCEALWRA LSP R+L+ G P L L Q I+ V+ +AI+AG Sbjct: 180 DQKVIAGLGNIYVCEALWRAHLSPETPARALVNAEGKPVAALEDLTQAIRTVIAEAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++F+VY + GE C + C + R+ QAGRSTF+C CQ+ Sbjct: 240 GSSLRDHIQADGSLGYFQHSFNVYDREGEACRTPGCTGTVERMTQAGRSTFHCPQCQR 297 >gi|319406580|emb|CBI80222.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. 1-1C] Length = 291 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 150/297 (50%), Positives = 198/297 (66%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ IE H+S +K + +H+H I++ + K YR Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLV---EHDHCIINI-QAKDDKIYR 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+ Sbjct: 117 LTYNDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 Q IVAG+GNIYVCEALWR+ LSP R +L +++ T K + L Q I V+ +AI +G Sbjct: 177 QSIVAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLKSTNF-LAQNICNVITEAIASG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+SLRDY+H+D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 236 GTSLRDYMHVDSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|49475062|ref|YP_033103.1| formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] gi|81648257|sp|Q6G4T2|FPG_BARHE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49237867|emb|CAF27063.1| Formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] Length = 291 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 142/296 (47%), Positives = 195/296 (65%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+R++LRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIVSVTLNRRDLRFPFPEAFSERLIGRTIMGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ IE ++ +K +K H+HV + + + K Y Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDFLRERSSTVSKFVK---HDHVVMDI-QAKDGKVYH 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGFM LV+T Y++P L+ LG EP N+F+ YL F K +LK LL+ Sbjct: 117 LTYNDVRRFGFMLLVDTRSLYEHPLLKKLGLEPMSNAFSGSYLQEVFVNKKISLKGVLLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GG Sbjct: 177 QSIVAGLGNIYVCEALWRSRLSPQRGAFTLALKTECARELAASLAQNIRNVITEAISSGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRDY+ DGS+GYFQ++FSVYG+ G+ CL +CG I RI+Q+GRS+FYC+ CQK Sbjct: 237 STLRDYIRTDGSLGYFQHSFSVYGREGKECL-HCGIPIVRILQSGRSSFYCSQCQK 291 >gi|319403662|emb|CBI77247.1| Formamidopyrimidine-DNA glycosylase [Bartonella rochalimae ATCC BAA-1498] Length = 291 Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 148/296 (50%), Positives = 193/296 (65%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ IE H+S +K + +H+H I++ + K YR Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLV---EHDHCIINI-RAKDDKIYR 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+ Sbjct: 117 LTYNDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI +GG Sbjct: 177 QSIVAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLESTNFLAQNICNVITEAIASGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +SLRDY+H D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 237 TSLRDYMHADSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|114705026|ref|ZP_01437934.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] gi|114539811|gb|EAU42931.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] Length = 297 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 141/298 (47%), Positives = 187/298 (62%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TVT + L R +LRF P+ F+ G I +SRRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVTKLHLARPDLRFPLPYRFAERIEGAVIASLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQ-----HNHVTISLTNNTNTKKY 112 + E L++ +HLGMSGSF IE A +P+ H+HV L + + Sbjct: 61 IAETTEGLTLAMHLGMSGSFRIETKGEAIVPGTFVHPRSEDRLHDHVRFDLKRDDGSTPS 120 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M L+E + +P LR+LG EP N L F +++ LK ALL Sbjct: 121 -VVFNDPRRFGYMTLIEPGQMHAHPHLRSLGLEPTGNGLTGEALAPLFADRSTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWRA+LSP R S+++ +G P L L I+ + DAI+AG Sbjct: 180 DQKAIAGLGNIYVCEALWRARLSPRRLAGSIVRKDGRPTARLDDLADRIRDTIADAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG +GYFQ++F VYG+ EPCL C I+RIVQ+GRSTF+C CQ+ Sbjct: 240 GSTLRDYRKADGELGYFQHSFRVYGREHEPCLREACRGTIKRIVQSGRSTFFCPECQR 297 >gi|254713417|ref|ZP_05175228.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|254716226|ref|ZP_05178037.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261218000|ref|ZP_05932281.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261321150|ref|ZP_05960347.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|260923089|gb|EEX89657.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261293840|gb|EEX97336.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] Length = 293 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 139/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E +YP L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEYPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|182677448|ref|YP_001831594.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] gi|238691220|sp|B2IE81|FPG_BEII9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|182633331|gb|ACB94105.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] Length = 288 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 139/293 (47%), Positives = 182/293 (62%), Gaps = 9/293 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + T + R +LRF FP +F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMVGASFTTVEQRRADLRFPFPDNFAARLEGRRVEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L +L+ +++HLGMSGSF IE + P KN H+HV L+ T R+IYN Sbjct: 61 LADLDDAQVLVMHLGMSGSFRIEKAGDLASPPPGKNAAHDHVVFGLSTGT-----RIIYN 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM L+ +P R +G EP N L F K + LK ALL+Q ++ Sbjct: 116 DPRRFGFMHLIARQDLAGHPLFRNVGIEPLGNELEGALLARLFAGKTTPLKTALLDQTLI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL RA LSP R +L G P + ++L + I+ VL +AI+AGGSSLR Sbjct: 176 AGLGNIYVCEALHRAGLSPRRAAGTLAGKKGQPTERAHRLSEIIRAVLEEAIEAGGSSLR 235 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG++GYFQ+ F VY + EPC CG I+RIVQAGRSTF+C CQ+ Sbjct: 236 DHRQADGALGYFQHRFRVYDREAEPCPREGCGGTIKRIVQAGRSTFFCAKCQR 288 >gi|148559153|ref|YP_001259977.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] gi|166215613|sp|A5VTD0|FPG_BRUO2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148370410|gb|ABQ60389.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] Length = 293 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 186/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L ++ Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-SDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|254718221|ref|ZP_05180032.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|265983178|ref|ZP_06095913.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306839961|ref|ZP_07472755.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] gi|264661770|gb|EEZ32031.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306404925|gb|EFM61210.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] Length = 293 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKGLGVEPTGNLLSGEVLAALFTGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCTNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|254700815|ref|ZP_05162643.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|254709159|ref|ZP_05170970.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|256030683|ref|ZP_05444297.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|256060142|ref|ZP_05450324.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|256158684|ref|ZP_05456567.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|256254088|ref|ZP_05459624.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|256370578|ref|YP_003108089.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|261221229|ref|ZP_05935510.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261316657|ref|ZP_05955854.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261324120|ref|ZP_05963317.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261751322|ref|ZP_05995031.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|265987729|ref|ZP_06100286.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|265997190|ref|ZP_06109747.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|294851408|ref|ZP_06792081.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] gi|256000741|gb|ACU49140.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|260919813|gb|EEX86466.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261295880|gb|EEX99376.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261300100|gb|EEY03597.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261741075|gb|EEY29001.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|262551658|gb|EEZ07648.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|264659926|gb|EEZ30187.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|294819997|gb|EFG36996.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] Length = 293 Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|225626549|ref|ZP_03784588.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|260169587|ref|ZP_05756398.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|261759114|ref|ZP_06002823.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|225618206|gb|EEH15249.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|261739098|gb|EEY27094.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] Length = 293 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 184/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPGLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|23503030|ref|NP_699157.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161620091|ref|YP_001593978.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|254705182|ref|ZP_05167010.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|260567351|ref|ZP_05837821.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261755887|ref|ZP_05999596.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|29611718|sp|Q8FXR6|FPG_BRUSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044584|sp|A9MAB2|FPG_BRUC2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23349072|gb|AAN31072.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161336902|gb|ABX63207.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|260156869|gb|EEW91949.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261745640|gb|EEY33566.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] Length = 293 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 184/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRKPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|319785617|ref|YP_004145093.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171505|gb|ADV15043.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/298 (46%), Positives = 186/298 (62%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +V++ T+ + R +LRF FP F+ GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQLVLEGATIARVEARRPDLRFPFPEKFAQRLAGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 ++LEG ++I HLGMSGSF IE + K+ H+HV + + T+ Sbjct: 61 TMDLEGGPALICHLGMSGSFRIETADGSDMPGIFRHDRSKSSNHDHVVFHVVSPAGTRS- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM E L +P L LG EP N+ + L+ + S LK ALL Sbjct: 120 RVIFNDPRRFGFMLFAE-GLPDVHPMLAGLGVEPTGNTLDGALLSSLMKGRRSPLKAALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYV EALWRA LSP+R+ ++ + + L Q I+ V+ DAI AG Sbjct: 179 DQRLIAGLGNIYVSEALWRAGLSPLREAGTIARPGKKAQAQSEHLAQAIRSVISDAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRDY+ DGS+GYFQ+AF+VY + GE C +CG I R+VQ+GRSTFYC CQ+ Sbjct: 239 GSSLRDYMQTDGSLGYFQHAFAVYDREGEACSKPSCGGHIERVVQSGRSTFYCRTCQR 296 >gi|17988229|ref|NP_540863.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62291019|ref|YP_222812.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82700930|ref|YP_415504.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis biovar Abortus 2308] gi|189025233|ref|YP_001936001.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225853608|ref|YP_002733841.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237816522|ref|ZP_04595515.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|254690315|ref|ZP_05153569.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 6 str. 870] gi|254694803|ref|ZP_05156631.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 3 str. Tulya] gi|254696432|ref|ZP_05158260.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59] gi|254731344|ref|ZP_05189922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 4 str. 292] gi|256045787|ref|ZP_05448665.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|256112507|ref|ZP_05453428.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|256258568|ref|ZP_05464104.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|256264948|ref|ZP_05467480.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|260546283|ref|ZP_05822023.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260563081|ref|ZP_05833567.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260755854|ref|ZP_05868202.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260759077|ref|ZP_05871425.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260760803|ref|ZP_05873146.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260884879|ref|ZP_05896493.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|261215129|ref|ZP_05929410.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|265992203|ref|ZP_06104760.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|265993943|ref|ZP_06106500.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|297247406|ref|ZP_06931124.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|22001593|sp|Q8YED2|FPG_BRUME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75496004|sp|Q57A83|FPG_BRUAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101296|sp|Q2YQP8|FPG_BRUA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691494|sp|B2S9T2|FPG_BRUA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789430|sp|C0RG65|FPG_BRUMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17983995|gb|AAL53127.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62197151|gb|AAX75451.1| MutM, formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82617031|emb|CAJ12140.1| Formamidopyrimidine-DNA glycolase:Formamidopyrimidine-DNA glycolase, zinc binding domain:Sugar transporter superfamily [Brucella melitensis biovar Abortus 2308] gi|189020805|gb|ACD73527.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225641973|gb|ACO01887.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237788589|gb|EEP62804.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|260096390|gb|EEW80266.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260153097|gb|EEW88189.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260669395|gb|EEX56335.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260671235|gb|EEX58056.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260675962|gb|EEX62783.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260874407|gb|EEX81476.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|260916736|gb|EEX83597.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|262764924|gb|EEZ10845.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|263003269|gb|EEZ15562.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|263095432|gb|EEZ19033.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|297174575|gb|EFH33922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|326410182|gb|ADZ67247.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M28] gi|326539900|gb|ADZ88115.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M5-90] Length = 293 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRPGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|239833244|ref|ZP_04681573.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] gi|239825511|gb|EEQ97079.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] Length = 293 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 136/298 (45%), Positives = 185/298 (62%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDRFAQRLSGRRISALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE + K H+HV L + Sbjct: 61 TIHLDDGLSVISHLGMSGSFRIETDEGGDTPGQFHHERSKLSAHDHVVFHL-QRADGGSA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFM E +P L LG EP N + L+ F + + LK ALL Sbjct: 120 RVVYNDPRRFGFMLFAEEGTLDSHPLLAGLGIEPTGNLLSGAVLSELFSGRKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP+R S+ Q+ + + +L +I+ V+ +AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSHLSPMRAAGSVAQD----PETMERLASDIRTVIAEAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC + C + R VQ+GRSTF+C CQ+ Sbjct: 236 GSTLKDYIQADGALGYFQHSFSVYGREGEPCRNPACKGFVERAVQSGRSTFFCASCQQ 293 >gi|153008052|ref|YP_001369267.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] gi|151559940|gb|ABS13438.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] Length = 302 Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 137/298 (45%), Positives = 186/298 (62%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP HF G++I + RRAKYL Sbjct: 10 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDHFVERLSGRRISALGRRAKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE + K H+HV L + Sbjct: 70 TIHLDDGLSVISHLGMSGSFRIETDDDGGTPGEFHHERSKLSAHDHVVFHLLR-ADGAPA 128 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM E +P L +LG EP N + L F + + LK ALL Sbjct: 129 RIVYNDPRRFGFMLFAEEGTLDSHPLLASLGIEPTGNLLSGTILAELFKGRRTPLKAALL 188 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP++ S+ QN I+ +L +I+ V+ +AI AG Sbjct: 189 DQRLIAGLGNIYVCEALWRSHLSPMQTAGSVAQNPA----IMEQLAADIRTVIAEAIAAG 244 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC + C ++ R VQ+GRSTF+C CQ+ Sbjct: 245 GSTLKDYIQADGALGYFQHSFSVYGREGEPCKNPACNGIVERAVQSGRSTFFCASCQQ 302 >gi|90420499|ref|ZP_01228406.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90335227|gb|EAS48980.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 297 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 136/298 (45%), Positives = 186/298 (62%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + L R +LRF P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARITHLHLARPDLRFALPERFAERVTGRRITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQ-----HNHVTISLTNNTNTKKY 112 + E+EG+L + +HLGMSGSF IE S +P+ H+HV +T + + Sbjct: 61 VAEMEGDLVLAMHLGMSGSFRIEGPEGESLPGVFHHPRSTARLHDHVRFDVTTG-DGQPA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 VIYNDPRRFG+M L+ + +P LG EP N + L F + + LK LL Sbjct: 120 AVIYNDPRRFGYMTLIARAEMETHPHFAGLGIEPTGNGLSGAALAPAFAGRAAPLKAVLL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+I+AG+GNIYVCEALWR++LSP R +L++ G P L L I++ + DAI AG Sbjct: 180 DQRIIAGLGNIYVCEALWRSRLSPRRAAGTLVKKGGRPSQRLDLLALNIRETIADAIAAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRDY DGS+GYFQ++F+ Y + EPC + C +IRRIVQ+GRSTF+C CQ+ Sbjct: 240 GSSLRDYRQADGSLGYFQHSFAAYDREHEPCRHAGCRGVIRRIVQSGRSTFFCLVCQR 297 >gi|319898369|ref|YP_004158462.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] gi|319402333|emb|CBI75872.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] Length = 291 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 146/296 (49%), Positives = 190/296 (64%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L + + + L+RKNLRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETIRRGLNPFLTGAKIISVKLNRKNLRFPFPEAFSERLVGRTIVKLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ IE H+S +K + H+H I++ + + YR Sbjct: 61 LFYLSRNETILSHLGMSGSWRIEGEFLKKEHSSVSKLV---AHDHCIINV-QAKDDRIYR 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGFM L +T Y++P L+ LG EP N+ + YL F K ++LK ALL+ Sbjct: 117 LTYNDVRRFGFMLLTDTRKLYEHPLLKRLGVEPMKNTLSGAYLKKAFVNKKTSLKTALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI AGG Sbjct: 177 QSIVAGLGNIYVCEALWRSHLSPQRSAFTLALEDLCMLESANFLAQNICDVITEAIVAGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +SLRDY+H DGS+GYFQ+ FSVYG+ G+ CL NC I RI+Q+GRS+FYC CQK Sbjct: 237 TSLRDYMHADGSLGYFQHYFSVYGREGKECL-NCEIPIVRILQSGRSSFYCPQCQK 291 >gi|254503738|ref|ZP_05115889.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] gi|222439809|gb|EEE46488.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] Length = 297 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/298 (46%), Positives = 188/298 (63%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + +R +LRF FP F G+ + +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLTKVDQNRPDLRFPFPDDFVERLTGRSVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT-SCAKPI-------KNPQHNHVTISLTNNTNTKKY 112 L +++ +I+HLGMSGSF IE+ + P K+P+H+HV L+ N Sbjct: 61 LADIDSGDVLIMHLGMSGSFRIENAIDKSTPGEFAHERNKDPKHDHVVFHLSL-PNDGSA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFMDLV + +P R LG EP N+ + L F + S LK ALL Sbjct: 120 RIIYNDPRRFGFMDLVPRTDLSAHPYFRELGLEPLGNALSGEVLARLFAGRKSPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCE+LWR+ LSP R +L+ +G P L Q ++ L DAI AG Sbjct: 180 NQKLIAGLGNIYVCESLWRSGLSPKRLASTLVTKSGKPTKKADLLAQNVRLTLEDAILAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ DG++GYFQ++F+VY + G PC + NC +RR+VQ+ RSTFYC CQ+ Sbjct: 240 GSSLRDHTQADGTLGYFQHSFAVYDREGAPCRTPNCTGTVRRVVQSNRSTFYCPICQR 297 >gi|306842707|ref|ZP_07475350.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] gi|306287153|gb|EFM58655.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] Length = 293 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 136/298 (45%), Positives = 185/298 (62%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C++ CG + R VQ+GRSTF+C CQ+ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQR 293 >gi|49473899|ref|YP_031941.1| formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] gi|81647239|sp|Q6G0L3|FPG_BARQU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49239402|emb|CAF25740.1| Formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] Length = 291 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 138/296 (46%), Positives = 189/296 (63%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + I L+R++LRF FP FS G+ I+++ RR KYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIISITLNRRDLRFPFPEAFSERLVGRTIMELGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSGS+ IE +++ K +K H+H + + + K Y Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDLLRKTYSAAGKFVK---HDHFLMDI-QAKDGKVYH 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGFM L++T+ Y++P L+ LG EP N F+ YL F K +LK LL+ Sbjct: 117 LTYNDVRRFGFMLLLDTNRIYEHPLLKKLGLEPLSNEFSGRYLQEAFVNKKISLKGVLLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q I+AG+GNIYVCEALWR++LSP R +L ++ L Q I+ V+ +AI GG Sbjct: 177 QSIIAGLGNIYVCEALWRSRLSPQRGAFTLALKTVCAREFADSLAQNIRNVIAEAISFGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRDY+ DGS+GYFQ++FSVYG+ G+ C CG I RI Q+GRS+FYC+ CQK Sbjct: 237 STLRDYIRTDGSLGYFQHSFSVYGREGKECF-QCGIPITRISQSGRSSFYCSQCQK 291 >gi|319408042|emb|CBI81696.1| Formamidopyrimidine-DNA glycosylase [Bartonella schoenbuchensis R1] Length = 291 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 142/293 (48%), Positives = 188/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+RKNLRF FP FS G++II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLTGAKIISVTLNRKNLRFPFPEEFSEKLVGRRIIELDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ H+GMSG++ IE K K H+H + + + Y +IY Sbjct: 61 LFHLSQNETILGHMGMSGTWRIEDKLFKKEYASMGKLVAHDHFIMDV-RAKDGNVYHIIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGF+ LV+T ++P L+ LG EP + + YL F K ++LK ALL+Q I Sbjct: 120 NDTRRFGFILLVDTIKLNEHPLLKKLGVEPMGDVLSGSYLQKAFINKKTSLKMALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEALWR++LSP R +L + ++ L Q I+ V+ +AI AGGSSL Sbjct: 180 IAGLGNIYVCEALWRSRLSPQRSAFTLALKSARAYELANCLAQNIRDVISEAIIAGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYVH DGS+GYFQ+ FSVYG+ G+ CL C I RI+QAGRS+FYC CQK Sbjct: 240 RDYVHTDGSLGYFQHNFSVYGREGKECL-QCEVPIVRILQAGRSSFYCPKCQK 291 >gi|307942717|ref|ZP_07658062.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] gi|307773513|gb|EFO32729.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] Length = 297 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + +R +LRF FP +F G K+ +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPSFEGAVIAKLDQNRPDLRFPFPENFEGRLTGHKVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L ++E +++HLGMSGSF IE + + KNP+H+HV L + Sbjct: 61 LADIETGDVLVMHLGMSGSFRIETDADELSPGAFQFERSKNPKHDHVVFHLEQKSGATA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM L+E + +P +G EP N + + F K + LK ALL Sbjct: 120 RIIYNDPRRFGFMTLIERATLGDHPLFAKMGMEPLGNDLDGQQIADLFSGKKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ L+PIR +L G D L + I+ L DAI+AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSGLNPIRAAGTLATKTGRATDKAKLLAEMIRDTLSDAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ DGS+GYFQ++F+VY + GEPC + CG I RIVQ+ RSTFYC CQ+ Sbjct: 240 GSTLRDHTKADGSLGYFQHSFAVYDREGEPCRTEGCGGTIERIVQSNRSTFYCPRCQR 297 >gi|306843600|ref|ZP_07476201.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] gi|306276291|gb|EFM57991.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] Length = 293 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 136/297 (45%), Positives = 184/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C++ CG + R VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQ 292 >gi|13474651|ref|NP_106220.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] gi|17375857|sp|Q98BG6|FPG_RHILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14025406|dbj|BAB52006.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] Length = 296 Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 184/297 (61%), Gaps = 11/297 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + R +LRF FP FS GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARLTRVEARRPDLRFPFPERFSERLTGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTISLTNNTNTKKY 112 + ++ +I HLGMSGSF IE + K+ H+HV + + + Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIETDDDGETPGVFHHERSKSTAHDHVVFDVVA-ADGARS 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM E S + +P L LG EP N+ + + L + S LK ALL Sbjct: 120 RVIFNDPRRFGFMLFAEGSPE-THPMLAGLGVEPTGNTLDGVLLASLLKGRGSPLKAALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GNIYV EALWRA LSP+R+ ++ + + + +L + I+ V+ DAI AG Sbjct: 179 DQKLIAGLGNIYVSEALWRAGLSPLREAGTIARPSKKARQQSERLAEAIRSVISDAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRDY+H DGS+GYFQ++F+VY + GEPC CG I R+VQ+GRSTFYC CQ Sbjct: 239 GSSLRDYMHTDGSLGYFQHSFAVYDREGEPCPKPGCGGHIERVVQSGRSTFYCRTCQ 295 >gi|319405133|emb|CBI78739.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. AR 15-3] Length = 291 Score = 268 bits (684), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 144/296 (48%), Positives = 190/296 (64%), Gaps = 12/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L ++ + + L+ KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETIRRGLDPLLTGAKIISVKLNHKNLRFPFPEAFSERLVGRTIIRLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L N +I+ HLGMSG + IE H+S K + H+H I + + K YR Sbjct: 61 LFYLSHNETILSHLGMSGLWRIEDEFLRKEHSSIDKLV---AHDHCIIKV-QAKDDKIYR 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + YND RRFGF+ L +T+ Y++P L+ LG EP +N+ + YL F K ++LK ALL+ Sbjct: 117 LTYNDVRRFGFILLTDTAKLYEHPLLKRLGVEPTENTLSGAYLKKAFANKKTSLKTALLD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAG+GNIYVCEALWR+ LSP R +L + + L Q I ++ +AI +GG Sbjct: 177 QSIVAGLGNIYVCEALWRSHLSPQRSAFTLALEDVYMLESANFLAQNICNLITEAIISGG 236 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +SLRDY+H DGS GYFQ+ FSVYG+ G+ CL NC + I RI+Q+GRS+FYC CQK Sbjct: 237 ASLRDYMHADGSFGYFQHYFSVYGREGKECL-NCKEPIVRILQSGRSSFYCPQCQK 291 >gi|316931481|ref|YP_004106463.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] gi|315599195|gb|ADU41730.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF +IE P ++ H+HV +T+ Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIEADGETTPGEFHYQRSEDRTHDHVVFEMTSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RIVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDANLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA+LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRARLSPKRKAATLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC S CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPCPS-CGGTVQRFVQNGRSTFWCPKCQK 291 >gi|260461958|ref|ZP_05810203.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] gi|259032205|gb|EEW33471.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] Length = 301 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 136/303 (44%), Positives = 186/303 (61%), Gaps = 18/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS G+ I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGARLVRVETRRPDLRFPFPERFSERLTGRTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC--------------AKPIKNPQHNHVTISLTNN 106 + ++ +I HLGMSGSF IE + +P K+ H+HV + + Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIEADADNETDDNGTLGVFHHERP-KSAAHDHVVFHVASA 119 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + RVI+NDPRRFGFM E S + +P L LG EP N+ + + L + S Sbjct: 120 AGARS-RVIFNDPRRFGFMLFAEGSPE-THPMLAGLGVEPTGNALDGVLLASLLKGRRSP 177 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK ALL+Q+++AG+GNIYV EALWRA LSP+R+T ++ + ++ +L + I+ V+ Sbjct: 178 LKAALLDQRLIAGLGNIYVSEALWRAGLSPLRETGTIARPGKKAREQSERLAEAIRSVIS 237 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCT 285 DAI AGGSSLRDY+H DGS+GYFQ++F+VY + GEPC CG + R+VQ+GRSTFYC Sbjct: 238 DAIAAGGSSLRDYMHADGSLGYFQHSFAVYDREGEPCAKPGCGGHVERVVQSGRSTFYCR 297 Query: 286 YCQ 288 CQ Sbjct: 298 TCQ 300 >gi|217979158|ref|YP_002363305.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] gi|254789444|sp|B8EKR5|FPG_METSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|217504534|gb|ACK51943.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] Length = 292 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 183/297 (61%), Gaps = 13/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R +LRF FP F G++I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMVGARILSVDQRRPDLRFPFPDRFPERLAGRRILALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------PIKNPQHNHVTISLTNNTNTKKYR 113 L +L+ +I+HLGMSGSF +E AK P KN H+HV +LT+ R Sbjct: 61 LADLDDGDVLIMHLGMSGSFRVEQAGPAKTLSPRGAPPKNAAHDHVVFTLTSGG-----R 115 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 ++YNDPRRFGFM + + +P R+LG EP N + L F K ++LK ALL+ Sbjct: 116 IVYNDPRRFGFMQIAARADLAAHPLFRSLGVEPLGNELSGAALARLFAGKTTSLKAALLD 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIYVCEAL RA LSP+R+ SL + +G P + +L I++VL +A+ AGG Sbjct: 176 QSLVAGLGNIYVCEALHRAGLSPLRQAGSLTKKSGRPTERANRLADTIREVLEEAVAAGG 235 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ +G++GYFQ+ F VY + PC + C I RI Q GRS+F+C+ CQK Sbjct: 236 SSLRDHRQTNGALGYFQHNFRVYDRALHPCPTPGCKGEISRITQGGRSSFFCSMCQK 292 >gi|300025047|ref|YP_003757658.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] gi|299526868|gb|ADJ25337.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] Length = 293 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 134/298 (44%), Positives = 183/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L R NLRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVVTGRRIAAVELRRPNLRFPFPERFAERLVGQRIDRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIK-------NPQHNHVTISLTNNTNTKKY 112 + EL G +++HLGM+G F I+E P + +P H+HV LT Sbjct: 61 IAELSGGEDLVMHLGMTGRFTILEKGRTDTPGEYVNSVGADPVHDHVVFKLTGGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM ++ + + ++P R LG EP + A YL + K +NLK L+ Sbjct: 116 RIVYNDPRRFGFMVMMPHAERSEHPLFRALGVEPLGSELTADYLAARARGKKANLKAFLM 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYV EAL+R+ LSP R R+L G P + KL+ I++VL AIDA Sbjct: 176 DQRIVAGLGNIYVAEALFRSGLSPNRVARALADRRGAPTERAEKLVPAIREVLEQAIDAR 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY G+ G FQN+F+VY + G PC + CG IRR+V AGR++FYC CQ+ Sbjct: 236 GSTLRDYRDASGASGGFQNSFAVYDRAGRPCPRAGCGGEIRRVVHAGRASFYCPRCQR 293 >gi|118590464|ref|ZP_01547866.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] gi|118436927|gb|EAV43566.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] Length = 305 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 132/297 (44%), Positives = 185/297 (62%), Gaps = 10/297 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + +T + +R +LRF FP F+ G+++ +SRR+KYL Sbjct: 9 MPELPEVETVKRGLAPTFEGALITKVDQNRPDLRFPFPDGFADRLTGRRLTVLSRRSKYL 68 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT-SCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +++ +++HLGMSGSF IE+ + A P KNP+H+HV L + + + Sbjct: 69 LGDIDSGDVLVMHLGMSGSFRIENDLAGATPGSFVHARSKNPKHDHVVFHL-ESADGARA 127 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFMDL+ ++P R LG EP N L F+ + + LK ALL Sbjct: 128 RIVYNDPRRFGFMDLIARPALAEHPFFRDLGLEPLGNDLGGETLARLFNGRKTPLKAALL 187 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCEALWR LSP R +L+ G P +L I+ L DAI AG Sbjct: 188 NQKLIAGLGNIYVCEALWRTGLSPERAAGTLVTRTGRPTKKAEELAANIRATLEDAIRAG 247 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ DG++GYFQ++F+VY + GE C + C + R+VQ+ RSTF+C CQ Sbjct: 248 GSSLRDHTQADGTLGYFQHSFAVYDREGETCRTPGCTGTVARLVQSNRSTFHCPACQ 304 >gi|110636424|ref|YP_676632.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium sp. BNC1] gi|123161465|sp|Q11AV8|FPG_MESSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110287408|gb|ABG65467.1| DNA-(apurinic or apyrimidinic site) lyase [Chelativorans sp. BNC1] Length = 297 Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 137/298 (45%), Positives = 179/298 (60%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS +G +I + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMEGARIIHVEQRRADLRFPFPAGFSEHVKGCRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L+ LE ++ HLGMSGSF IE + K K +H+HV L + Sbjct: 61 LLHLENGRVLVSHLGMSGSFRIEESGSDKLRGDFHYARSKAEKHDHVVFHLARHEGGSA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFM L++++ +P LG EP N+ + L K + LK AL+ Sbjct: 120 RVIYNDPRRFGFMLLLDSADLEAHPLFAGLGVEPTGNALDGALLARLLAGKRAPLKAALM 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP R ++ G +L I+ V+ +AI AG Sbjct: 180 DQRLVAGLGNIYVCEALWRAGLSPRRIAATIATREGKSTGRSERLAGAIRTVIAEAIAAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DYV DGS+GYFQ++FSVY + G+PC C I+R VQ GRSTFYC CQ+ Sbjct: 240 GSSLKDYVQADGSLGYFQHSFSVYDREGKPCRKEGCSGTIQRFVQGGRSTFYCPICQR 297 >gi|39933164|ref|NP_945440.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] gi|81564483|sp|Q6NDM1|FPG_RHOPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39652789|emb|CAE25528.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] Length = 291 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 180/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF ++E +P ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVEADGETRPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKDEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|149203140|ref|ZP_01880111.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] gi|149143686|gb|EDM31722.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] Length = 283 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 128/294 (43%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + +A G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPVMEGQVIASASVNRPDLRWPFPPNMAARLTGQTVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG ++ + + + +H+HV + N R+ + Sbjct: 61 LADLTSGESLLIHLGMSGRMLVSGDPLGRFVHDHPAPEKHDHVVFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N+F+ YL +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLPTATAETHPLLARIGPEPLGNAFSEPYLVAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA+LSP+++ +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARLSPLQRAGALSGKRAA------ALVPIIRDVLSDAISAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC S C I R+VQAGRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRSPGCNGHIARVVQAGRSSFYCPLCQR 283 >gi|86747745|ref|YP_484241.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] gi|123408924|sp|Q2J2I0|FPG_RHOP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86570773|gb|ABD05330.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] Length = 293 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 133/297 (44%), Positives = 181/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F F+A G+ I + RRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGFRIDRAMANRCDLRFPFQPDFAARLTGQTITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF ++ A P ++ H+HV +++ Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVNGAGDATPGEFHHPRSEDRTHDHVVFEMSSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM + + P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVIFNDPRRFGFMKIFARAAIDDEPHLKGLGPEPLGNAFDAAMLARACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP RK +L G P D +L+ I+ VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALWRAHLSPKRKASTLADRKGAPTDRAVRLVDAIRAVLGDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ G +GYFQ++F+VY + GE C + C ++R+VQ GRSTF+C+ CQ Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDREGERCRTPGCNGTVKRLVQNGRSTFWCSGCQ 292 >gi|260431703|ref|ZP_05785674.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415531|gb|EEX08790.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] Length = 283 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 184/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGVVIERADVNRPDLRWPFPERMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN---PQ-HNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + + + PQ H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHHHPMPQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ Q+ L LGPEP N FN YL F + + +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTATAEQHKLLAVLGPEPLGNDFNETYLIDAFRGRATPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP RK + + L+ I+ VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARVSPRRKAGQISAGR------VGALVPVIRTVLTEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC + CG IRRI Q+GRSTFYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTEGCGAEIRRITQSGRSTFYCAQCQR 283 >gi|192288520|ref|YP_001989125.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] gi|238692562|sp|B3Q620|FPG_RHOPT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192282269|gb|ACE98649.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] Length = 291 Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 134/297 (45%), Positives = 179/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F+A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF +I P ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + G+PC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGKPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|163733258|ref|ZP_02140702.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] gi|161393793|gb|EDQ18118.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] Length = 283 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 190/294 (64%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIKQADVNRPDLRWPFPVDMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNP---QHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + + ++P +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHRHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KNS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADAHKLLAVLGPEPLGNDFHESHLIAAFKNKNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ P RK + + L+ +++VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPTRKAGKISGAR------VAGLVPIVREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F YG+ G+PC S C IRRIVQ+GRS+FYCT CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDAYGREGDPCKRSGCTGQIRRIVQSGRSSFYCTQCQR 283 >gi|115522499|ref|YP_779410.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] gi|122297836|sp|Q07UF4|FPG_RHOP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115516446|gb|ABJ04430.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] Length = 293 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + L R +LRF F F+ G+ + +SRRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGARFDTVALRRADLRFPFQPDFTDRLTGQTVTGLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L ++++HLGMSGSF +IE A P ++ H+HV S+++ Sbjct: 61 LADLSSGDALLMHLGMSGSFRVIEPGGEATPGDFHHPRSEDRSHDHVVFSMSSGKT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M L + P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 117 -VVFNDPRRFGYMKLFRRAAIEDEPFLKGLGPEPLGNAFDASMLARACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P + KL++ I+ VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRLAATLATKAGGPTERAEKLVEAIRTVLHEAIQAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+VY + EPC + CG +++R VQ GRSTF C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDRESEPCRTKGCGGVVKRFVQNGRSTFCCPKCQK 293 >gi|85706182|ref|ZP_01037277.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] gi|85669346|gb|EAQ24212.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] Length = 283 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 126/294 (42%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +M+ + ++R +LR+ FP SA G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPIMEGQVIARATVNRPDLRWPFPPEMSARLTGQRVLALRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNP---QHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + + +P +H+HV + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDPLGQFVHAHPAPEKHDHVVLDMAGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N FN +YLT +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTTTAESHPLLARIGPEPLGNDFNELYLTAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA +SP+ + +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAGISPLTRAGTLSAKRAA------SLVPIIRDVLRDAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+ C S C +I R++QAGRS+FYC CQ+ Sbjct: 230 RDFRQTDGELGYFQHSFDVYGREGDLCRNSGCTGLITRVIQAGRSSFYCPKCQR 283 >gi|110677612|ref|YP_680619.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] gi|122973136|sp|Q16DL0|FPG_ROSDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109453728|gb|ABG29933.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] Length = 283 Score = 258 bits (660), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 188/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIARADVNRPDLRWPFPADMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + + + +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHSHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +NS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ PIRK + +G L +I+E VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPIRKAGKI---SGARVATLVPIIRE---VLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C I+RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR 283 >gi|299133357|ref|ZP_07026552.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] gi|298593494|gb|EFI53694.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] Length = 293 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 132/298 (44%), Positives = 180/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F+A G I + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRGDLRFPLQKDFAARLAGHVITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-PI-------KNPQHNHVTISLTNNTNTKKY 112 L +L+ +++HLGMSGSF + K P +N H+HV + N Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVMQGDNGKIPAVFHHPRSENRTHDHVVFEMGNGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + +NDPRRFG+M +V + P LR LGPEP N+F+A L K ++LK ALL Sbjct: 117 -ISFNDPRRFGYMKIVPRADLEGEPFLRALGPEPLGNAFDAAMLAQACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R+ +L +G P D +L+ I+ VL AI+AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRQASTLATKSGAPTDHAVRLVAAIRAVLNAAIEAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTRGCRGTVKRFTQNGRSTFWCPSCQK 293 >gi|148251702|ref|YP_001236287.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. BTAi1] gi|166215611|sp|A5E887|FPG_BRASB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146403875|gb|ABQ32381.1| DNA-(apurinic or apyrimidinic site) lyase [Bradyrhizobium sp. BTAi1] Length = 293 Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 183/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F+ +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVAAEARRGDLRFPFQPDFAKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPI-------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF +I+ P K+ H+HV +++ + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIKQDDEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ + P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIEREPHLKDLGPEPLGNEFDAAMLATACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHARRLVEAIHAVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC ++ CG +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTDGCGGVVKRFVQNGRSTFWCPKCQR 293 >gi|91974694|ref|YP_567353.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB5] gi|123749485|sp|Q13EN7|FPG_RHOPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91681150|gb|ABE37452.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB5] Length = 293 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPAMEGFRIARAVTNRDDLRFPLQKDFVARLTGQIVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF ++ P ++ H+HV +++ Sbjct: 61 LADLASGDVLLMHLGMSGSFRVVAADGAHTPGEFHHPRSEDRTHDHVVFDMSSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM + + P L+ LGPEP N+F+A+ L K ++LK ALL Sbjct: 116 RVIFNDPRRFGFMKIFPRAAIDDEPHLKGLGPEPLGNAFDAVMLARACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP RK +L P D +L I+ VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALWRAHLSPKRKAATLANRKNEPTDHALRLTDAIRAVLGDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+ Y + GE C ++ CG ++R VQ GRSTF+C+ CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAAYDREGERCRTDGCGGAVKRFVQNGRSTFWCSGCQK 293 >gi|254471056|ref|ZP_05084459.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] gi|211960198|gb|EEA95395.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] Length = 300 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 132/300 (44%), Positives = 177/300 (59%), Gaps = 11/300 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L N T+ + R +LRF F F ++++ SRRAKYL Sbjct: 1 MPELPEVETVRRGLAPFFDNATICRVEQRRPDLRFPFGDDFVERLENRQVVSFSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----------KNPQHNHVTISLTNNTNTK 110 L++L+ +++HLGMSGSF T A+P K+PQH+HV + Sbjct: 61 LLDLDSGDVLVMHLGMSGSFRWIETEDAEPTQTVEMYHAKGKHPQHDHVIFHVRPADRET 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++IYNDPRRFGFM L+ S +P +G EP N + YL F + ++LK A Sbjct: 121 IVKIIYNDPRRFGFMVLIPRSKLATHPMFVDMGIEPLGNELDGAYLAKLFENRKTSLKAA 180 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LLNQK +AG+GNIYVCEALWR LSP +L +G P +L I++VL +AI Sbjct: 181 LLNQKFIAGLGNIYVCEALWRTGLSPFNSASTLAGKSGKPLKKADELSNHIREVLQEAIK 240 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +GGSSL+D+ DGS+GYFQ+ FSVY + G+ C + C +I R VQ GRSTF+C CQK Sbjct: 241 SGGSSLKDHRQADGSLGYFQHNFSVYDREGQACRTPKCSGVIERKVQNGRSTFFCPKCQK 300 >gi|92115680|ref|YP_575409.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91798574|gb|ABE60949.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter hamburgensis X14] Length = 293 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/298 (43%), Positives = 180/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPI-------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF +I+ P ++ H+HV+ ++++ + Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGATAPGDCHHPRNEDRAHDHVSFTMSSGAS---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 VI+NDPRRFG+M ++ ++ P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -VIFNDPRRFGYMKVIARTVLNDEPLLKGLGPEPLGNEFDAAMLARACRDKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLASKTGGPADRAGRLVEAIHDVLNQAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GE C + C ++R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTTGELGYFQHSFRVYDREGEKCRTPTCRGTVKRFTQNGRSTFWCPVCQK 293 >gi|159045909|ref|YP_001534703.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] gi|189044587|sp|A8LNK8|FPG_DINSH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157913669|gb|ABV95102.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] Length = 284 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 17/295 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + + R +LR+ P + GK+I+ ++RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPDLRWPLPANMQTRLEGKRILRLARRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-----QHNHVTISLTNNTNTKKYRVI 115 L EL+ ++I+HLGMSG +I + +H+HV + RV+ Sbjct: 61 LAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLEKHDHVVLDFDTGA-----RVV 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +ND RRFG MDL ET+ Q+P L TLGPEP N+F+ YLT + + + +K+ALL+QK Sbjct: 116 FNDARRFGAMDLCETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLDQK 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCEAL++A +SP+RK + + + L+ I+ VL DAI+AGGSS Sbjct: 176 VVAGLGNIYVCEALFQAGISPLRKAGRVSETR------IASLVPIIRTVLGDAIEAGGSS 229 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG +GYFQ+ F VY + PC+ + C ++RR+VQ+GRS+FYC CQ+ Sbjct: 230 LRDYRQTDGDLGYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR 284 >gi|254460471|ref|ZP_05073887.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2083] gi|206677060|gb|EDZ41547.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium HTCC2083] Length = 283 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/294 (44%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM++ + ++R NLR+ FP S G KI + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMESTRIAKADVNRPNLRWPFPDQMSERLTGAKIERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ S+++HLGMSG +I + + +H+HV + N RV + Sbjct: 61 LADLDTGESLLIHLGMSGRMLISGAKIGQFTHDHPPAEKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N+F+ YL K S +K ALL+Q + Sbjct: 116 NDPRRFGAMDLLDTKTADSHKLLSSIGPEPLGNNFDEAYLIEVLKTKGSPIKTALLDQSV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA ++P RK N K + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAHIAPSRKA------NKISKPRVASLVPIIRQVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F VYG+ GEPC + +CG I+RIVQ+GRS+FYC CQ+ Sbjct: 230 KDFRQASGDLGYFQHSFDVYGREGEPCKTVDCGNTIKRIVQSGRSSFYCPSCQR 283 >gi|154247235|ref|YP_001418193.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] gi|238686730|sp|A7IKJ3|FPG_XANP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154161320|gb|ABS68536.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] Length = 293 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 133/298 (44%), Positives = 186/298 (62%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P +F+ G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPVLQGAVIESAEARRPDLRWPLPDNFAERLAGRRVEAIGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC-AKPIK--NPQ-----HNHVTISLTNNTNTKKY 112 L +L+G +I+HLGMSGS IE + +P + +P+ H+HV + L Sbjct: 61 LADLDGGEVMILHLGMSGSIRIEGGAVKGRPGRFHHPRGAGGPHDHVVLHLAGGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V +NDPRRFG + +V +P L LGPEP N FNA YL +++++LK ALL Sbjct: 117 -VTFNDPRRFGAILIVPYDQIMSHPLLAGLGPEPLGNGFNAEYLARACARRHTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK+VAG+GNIYVCEAL+RA LSP R ++ G P +L+ I+ VL +AI AG Sbjct: 176 DQKLVAGLGNIYVCEALFRAGLSPRRLAHTIATAEGAPTRRAERLVIAIRDVLREAIHAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ ++G +GYFQ+ F VY + G+PC + +C IRRIVQ GRSTFYC CQ+ Sbjct: 236 GSSLRDHRQVNGELGYFQHTFKVYDREGQPCQTLHCKDTIRRIVQNGRSTFYCPTCQR 293 >gi|114762146|ref|ZP_01441614.1| formamidopyrimidine-DNA glycosylase [Pelagibaca bermudensis HTCC2601] gi|114545170|gb|EAU48173.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. HTCC2601] Length = 283 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 188/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G +I+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNRIAQAQVNRPDLRWPFPERMAERLTGARILQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + + + +H+HV + + + RV + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDMADGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ +P L LGPEP N+F+ +L +N +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMQTATAEAHPLLAALGPEPLGNAFSESHLVAALAGRNMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ R + + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVRRISEKR------IASLVPVIREVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC + +CG + R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTPDCGATVHRMVQSGRSSFYCPRCQR 283 >gi|158422424|ref|YP_001523716.1| formamidopyrimidine-DNA glycosylase [Azorhizobium caulinodans ORS 571] gi|172048048|sp|A8IQM5|FPG_AZOC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158329313|dbj|BAF86798.1| formamidopyrimidine-DNA glycolase [Azorhizobium caulinodans ORS 571] Length = 293 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/298 (45%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVRRGLLPVLQGAVIESAEARRPDLRWPLPEGFAERLTGRRVEAVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------PIKNP-QHNHVTISLTNNTNTKKY 112 L +L+G +IVHLGMSGS IE P P H+HV L Sbjct: 61 LADLDGGEVLIVHLGMSGSIRIEGAQVKGRPAGFYHPRGEPGTHDHVVFHLAGGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V +NDPRRFG M LV +P L +LGPEP N+F+A YL + +NLK ALL Sbjct: 117 -VTFNDPRRFGAMLLVPYDQLDSHPLLSSLGPEPLGNTFHADYLAQACAGRRTNLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK+VAG+GNIYV EAL RA LSP R +L +G P +L+ I+ VL +AI AG Sbjct: 176 DQKVVAGLGNIYVSEALHRAGLSPRRMASTLASASGAPNVRTERLVTAIRDVLREAIQAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ ++G +GYFQ+ F VY + GEPC + C ++RIVQAGRSTF+C CQ+ Sbjct: 236 GSSLKDHRQVNGELGYFQHNFKVYDREGEPCPTLRCKGHVQRIVQAGRSTFFCATCQR 293 >gi|149912815|ref|ZP_01901349.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] gi|149813221|gb|EDM73047.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] Length = 283 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 180/297 (60%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + GK ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGAVIARADVNRPDLRWPLPVDMATRLSGKTVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L +L ++++HLGMSG + H P K H+HV + N R Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGAFHHDHPAPAK---HDHVVFHMANGA-----R 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + +NDPRRFG MDL+ T +P L LGPEP N F+ YL +N+ +K+ALL+ Sbjct: 113 ITFNDPRRFGAMDLISTPKADTHPLLAKLGPEPLGNQFDESYLADALSGRNTPIKSALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IVAG+GNIYVCEAL+RA++SP R+ R+L + L+ I+ VL DAI+AGG Sbjct: 173 QRIVAGLGNIYVCEALYRARISPKRRARNLSRARAA------ALVPIIRDVLRDAIEAGG 226 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ DG +GYFQ++F VY + G+PC + C I RIVQ+GRS+FYCT CQ+ Sbjct: 227 SSLRDFRQADGELGYFQHSFDVYDREGDPCRTPGCTGTITRIVQSGRSSFYCTLCQR 283 >gi|254511767|ref|ZP_05123834.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] gi|221535478|gb|EEE38466.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] Length = 283 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 186/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGVVIDRADVNRPDLRWPFPDRMADRLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGQFVHDHPAVQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ Q+ L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLQTATAEQHKLLSVLGPEPLGNDFHEQHLIDAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+R ++SP RK + P+ + L+ I++VL DAI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLYRGRVSPRRKAGQI----SAPR--VAALVPIIRQVLQDAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC + +CG I+RI Q+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRTESCGATIKRITQSGRSSFYCAQCQR 283 >gi|254474974|ref|ZP_05088360.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] gi|214029217|gb|EEB70052.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] Length = 283 Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 127/294 (43%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ +T ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVITKATVNRPDLRWPFPDRMAERLSGRRVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQ---HNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG + + + + PQ H+HV + N RV + Sbjct: 61 LADLDSGETLLIHLGMSGRMTVSGDPLGQFVHDHPQAQKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATAEQHKLLAVLGPEPLGNGFHDDHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + P+ + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQI----AAPR--VASLVPIIKDVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C I R+ Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRREGCDGTIARVTQSGRSSFYCAKCQR 283 >gi|92116584|ref|YP_576313.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91799478|gb|ABE61853.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] Length = 289 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/298 (43%), Positives = 182/298 (61%), Gaps = 18/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ +T + L R +LRF F F+A G++I+ + RRAK+L Sbjct: 1 MPELPEVETVRRGLQPVMEGARITRVELRRADLRFPFQPDFAARLTGQRIVGLGRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--------NHVTISLTNNTNTKKY 112 + +L +++HLGMSGSF I A P+ H +HV + L++ Sbjct: 61 MADLASGDVLMMHLGMSGSFRIG----AVPVGAFHHPRNVERVNDHVVLRLSSGKI---- 112 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + YNDPRRFGFM +V S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 113 -ITYNDPRRFGFMKIVARSALDDEPLLKGLGPEPLGNAFDAATLAKACAGKTASLKAALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQ +VAG+GNIY E L RA+LSP R+ +L ++G P D +L+ I+ VL +AI G Sbjct: 172 NQHVVAGLGNIYAAETLHRARLSPKRRASTLASHSGAPTDRARQLVAAIRAVLTEAIAVG 231 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 G++LR+ H DG +GYFQ++F VY G+PC + C ++RR VQ GR+TF+C CQK Sbjct: 232 GATLRNCRHPDGKLGYFQHSFEVYNHEGQPCTTPGCDGVVRRFVQNGRATFWCPKCQK 289 >gi|323136854|ref|ZP_08071935.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] gi|322398171|gb|EFY00692.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] Length = 328 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 127/294 (43%), Positives = 181/294 (61%), Gaps = 10/294 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + R +LRF FP F+ G++I+D+ RRAKYL Sbjct: 40 MPELPEVETVRRGLAPALVGARILRVEQRRGDLRFPFPPDFARRLGGRRILDLRRRAKYL 99 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 + +L+ + ++++HLGMSGSF I+ + + K+ H+HV L N RV Y Sbjct: 100 IADLDADEALVMHLGMSGSFRIDEDAPGRFHHPRDKSAAHDHVVFHLDNGR-----RVTY 154 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM LV + R +G EP +A L + F + + +K LL+Q++ Sbjct: 155 NDPRRFGFMLLVPARELDAHNLFRGVGVEPLGEGLDAAMLANAFRGRKAPVKALLLDQRL 214 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL RA++SP+ +L+ G P L +L + I++VL DA++AGGSSL Sbjct: 215 VAGLGNIYVCEALHRARVSPLAAAGTLVTATGKPGAALARLPKAIKEVLADALEAGGSSL 274 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DGS+GYFQ++F VY + G C + C + R+ Q+GRSTFYC CQK Sbjct: 275 RDHRQADGSLGYFQHSFRVYDREGAACPTPGCKGTVARVTQSGRSTFYCPRCQK 328 >gi|83944872|ref|ZP_00957238.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] gi|83851654|gb|EAP89509.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] Length = 286 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 172/297 (57%), Gaps = 19/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + R +LRF FP F+ G + + RR+KYL Sbjct: 1 MPELPEVETVRRGLIPAMEGRRILRAEARRPDLRFPFPDRFAERLTGTVVERLDRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L L ++++HLGMSG F + ++ NP H+HV + Sbjct: 61 LARLGSGETLLMHLGMSGRFSVTAEDISRQPGDFVYAAPANPAHDHVVFQMEGGVT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V YNDPRRFGFM L ET + P LR LGPEP N F+ L F + S +K LL Sbjct: 117 -VTYNDPRRFGFMTLFETDAEAAQPYLRDLGPEPLSNGFSEDLLNTAFKGRRSPIKAGLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +VAG+GNIYVCEALWRA++SP R +S+ P +L ++ V+ +AI+AG Sbjct: 176 DQHVVAGLGNIYVCEALWRAQISPRRLCQSI------PGARAARLAPAVRSVISEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ+ F VYG+ GEPC + RIVQ+GRSTF+C CQ+ Sbjct: 230 GSTLRDYAGADGAMGYFQHRFDVYGREGEPCHRCEDSRVERIVQSGRSTFFCPSCQR 286 >gi|75674239|ref|YP_316660.1| formamidopyrimidine-DNA glycolase [Nitrobacter winogradskyi Nb-255] gi|90101307|sp|Q3SWN3|FPG_NITWN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74419109|gb|ABA03308.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 179/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQAVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP--IKNPQ-----HNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF +I+ P P+ H+HV ++++ Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGVTVPGDFHRPRGEDRVHDHVRFTMSSRAE---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFG+M +V S P L+ LGPEP N F+A L H + ++LK ALL Sbjct: 117 -IVFNDPRRFGYMKIVARSALGDEPLLKGLGPEPLGNEFDAAVLAHGCRNRKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA+LSP R +L G P + +L+ I+ VL AI+AG Sbjct: 176 DQRVVAGLGNIYVCEALFRARLSPRRLAATLAMKTGAPSERAERLVGAIRDVLNQAIEAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ G +GYFQ++F VY + G+ C + C ++R Q GRSTF+C CQ Sbjct: 236 GSSLRDHRQTTGELGYFQHSFQVYDREGDKCRTPACKGAVKRFTQNGRSTFWCPVCQ 292 >gi|146278626|ref|YP_001168785.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] gi|166198740|sp|A4WVR6|FPG_RHOS5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145556867|gb|ABP71480.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] Length = 283 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M +++ ++R +LR+ P + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARVNRPDLRWPLPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + RV + Sbjct: 61 LADLSGGESLLIHLGMSGRMLVSGARVGDFVHDHPAPARHDHVVLEMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L +LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVPTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P+R SL + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAA------GLVPIIREVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G+PC++ C ++ RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGQPCVTPGCRGLVGRIVQSGRSSFHCPECQR 283 >gi|163743751|ref|ZP_02151125.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] gi|161383012|gb|EDQ07407.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] Length = 283 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 126/294 (42%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + K +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFSGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + P+ + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQI----AAPR--VGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GE C + CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEACRRAGCGGTVGRITQSGRSSFYCGKCQR 283 >gi|163738131|ref|ZP_02145547.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] gi|161388747|gb|EDQ13100.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] Length = 283 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + K +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPQRKAGQIAAQR------VGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC + C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAKCDGTVGRITQSGRSSFYCGKCQR 283 >gi|146337247|ref|YP_001202295.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. ORS278] gi|166215612|sp|A4YJG9|FPG_BRASO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146190053|emb|CAL74045.1| Bifunctional mutM protein:Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase); (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Bradyrhizobium sp. ORS278] Length = 293 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 129/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVTAEARRGDLRFPFQPDFVKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + EH P+ H+HV +++ + Sbjct: 61 LADLGSGDVLLMHLGMSGSFRVIKPEHEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIETEPHLKDLGPEPLGNEFDAAMLARACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHAKRLVEAIHTVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC ++ C +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTDGCEGVVKRFVQNGRSTFWCPKCQR 293 >gi|209883645|ref|YP_002287502.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] gi|229541077|sp|B6JCQ7|FPG_OLICO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209871841|gb|ACI91637.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] Length = 294 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/299 (43%), Positives = 179/299 (59%), Gaps = 15/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRNDLRFPLQTDFVARLGGRVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKP--IKNPQ-----HNHVTISLTNNTNTKK 111 L +L+ +++HLGMSGSF ++ A P +P+ H+HV + N Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVAMDGGQEATPGIFHHPRSESRTHDHVVFEMDNGAV--- 117 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + +NDPRRFG+M +V + P L+ LGPEP N FNA L K ++LK AL Sbjct: 118 --ISFNDPRRFGYMKIVARADLEAEPFLKALGPEPLGNEFNAAMLAQACAGKATSLKAAL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q++VAG+GNIYVCEAL+RA LSP R+ +L G P +L+ I+ VL AI+A Sbjct: 176 LDQRVVAGLGNIYVCEALYRAHLSPKRRASTLASRTGAPSGHAERLVPAIRTVLNAAIEA 235 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSSLRD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 236 GGSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTRGCKGTVKRFTQNGRSTFWCPSCQK 294 >gi|126460786|ref|YP_001041900.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] gi|166198739|sp|A3PFL2|FPG_RHOS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126102450|gb|ABN75128.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] Length = 283 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 123/295 (41%), Positives = 181/295 (61%), Gaps = 18/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-----PIKNPQHNHVTISLTNNTNTKKYRVI 115 L +L G S+++HLGMSG ++ + P + +H+HV + + R+ Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHGHPAPS-RHDHVVLEMEGGA-----RIT 114 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+ Sbjct: 115 FNDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQR 174 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSS Sbjct: 175 IVAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEAE------GLVPLIREVLLEAIEAGGSS 228 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG +GYFQ+ F VYG+ G PC++ C + RIVQ+GRS+F+C CQ+ Sbjct: 229 LRDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|77464917|ref|YP_354421.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides 2.4.1] gi|90101315|sp|Q3IY64|FPG_RHOS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77389335|gb|ABA80520.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodobacter sphaeroides 2.4.1] Length = 283 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEAE------GLVPLIREVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC++ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|296448042|ref|ZP_06889946.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] gi|296254442|gb|EFH01565.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] Length = 290 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 132/296 (44%), Positives = 178/296 (60%), Gaps = 13/296 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V + + L R +LRF FP F+A G++++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVFTRSPIERVELRRADLRFPFPPGFAARLAGRRVLALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC------AKPIKNPQHNHVTISLTNNTNTKKYRV 114 + E++G ++I+HLGMSGSF I+ A+ K H+HV + + RV Sbjct: 61 IGEIDGGDALIMHLGMSGSFRIDAADPEGVFHRARDTKA-AHDHVVLHFSGGA-----RV 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 YNDPRRFGFM LV +P LG EP L + + + LK ALL+Q Sbjct: 115 TYNDPRRFGFMLLVPRVELAAHPLFVGLGVEPLGPELTPETLAAELAGRKAPLKAALLDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + +AG+GNIYVCEAL RA LSP+R L+ G PK L L++ I++VL +AI+AGGS Sbjct: 175 RTIAGLGNIYVCEALHRAHLSPLRAAGGLVDAKGRPKRGLVDLVRAIREVLGEAIEAGGS 234 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SLRD+ DGS+GYFQ++F VY + PC + C + RI Q+GRSTF+C CQK Sbjct: 235 SLRDHRQTDGSLGYFQHSFRVYDREDAPCPTPGCRGQVSRIAQSGRSTFFCRDCQK 290 >gi|221640838|ref|YP_002527100.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] gi|254789449|sp|B9KQJ9|FPG_RHOSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221161619|gb|ACM02599.1| Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] Length = 283 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAESE------GLVPLIREVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC++ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|254295384|ref|YP_003061407.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] gi|254043915|gb|ACT60710.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] Length = 281 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 180/293 (61%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + L R +LRF FP FS +G KI + RRAK+L Sbjct: 1 MPELPEVETVRRGLIPAMQGRVIERVELRRADLRFPFPDDFSQRLQGVKIERLDRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIK-NPQHNHVTISLTNNTNTKKYRVIY 116 ++EL + +HLGM+G F IE A I NP+H+HV L +N +V + Sbjct: 61 MVELSSGELLTMHLGMTGRFSIEGEGFDIFAHAIAGNPKHDHVVFHLEDN-----LKVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM+L + LGPEP N F+A +L KK+S +K+ALL+Q++ Sbjct: 116 NDPRRFGFMELYRAGEAEKSKRFSKLGPEPLSNHFSAAHLNEVLQKKSSPIKSALLDQRV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R + ++ KL ++ V+ +AI+AGGSS+ Sbjct: 176 VAGLGNIYVCEALFRAGISPTRISSTIKGKRAE------KLAPIVKDVISEAIEAGGSSI 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG +GYFQ+ F VYG+ EPC C + ++RI Q+GRSTF+C CQK Sbjct: 230 SDFAQTDGKLGYFQHNFLVYGRENEPC-KVCDKPVQRISQSGRSTFFCASCQK 281 >gi|332559816|ref|ZP_08414138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] gi|332277528|gb|EGJ22843.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] Length = 283 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAAHLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPARLAGSLSRAEAE------GLVPLIREVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC++ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|114571613|ref|YP_758293.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] gi|114342075|gb|ABI67355.1| DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] Length = 287 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 125/298 (41%), Positives = 184/298 (61%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ ++ + + ++R NLR+ FP F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLVPALEGRRILAVDVNRPNLRYPFPERFAARLAGRRVEAIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-HTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L L+ ++I HLGMSG F IE A+P NP+H+HV + Sbjct: 61 LFRLDSGETMIGHLGMSGRFSIEVEGEVAQPGDFVHAAPANPKHDHVVFRAEGGVVVR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 YNDPRRFG+M+L T+ + + L LGPEP N F+ YL + + +K ALL Sbjct: 119 ---YNDPRRFGYMELFPTADEASHKTLGALGPEPHGNEFSGAYLGEVLAGRRTPIKTALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q IVAG+GNIYVCEAL R+ +SP R + S+ P +L ++++ V+++AI+AG Sbjct: 176 DQSIVAGLGNIYVCEALHRSGISPRRVSASI------PGARAERLARDVRDVIVEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ DG++GYFQ+ F VY + G PC + C I+R+VQ+GRST++C+ CQ+ Sbjct: 230 GSSLKDFASTDGALGYFQHGFRVYDRLGAPCPTPGCVGEIQRLVQSGRSTWFCSSCQR 287 >gi|304319873|ref|YP_003853516.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] gi|303298776|gb|ADM08375.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] Length = 286 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 132/298 (44%), Positives = 171/298 (57%), Gaps = 21/298 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + L R +LRF FP+ FS G +I+ V RR KYL Sbjct: 1 MPELPEVETVRRGLAPSMAGAMIERVELRRPDLRFPFPNGFSQRLEGNRILSVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE---------HTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L ++I+HLGMSG F++ H S + H HV +L + Sbjct: 61 TLPLSTGETLIMHLGMSGRFLVSGERAPGRFYHASAG----DVAHTHVRFTLQIPAEGRG 116 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + V Y DPRRFGFMDLV + +GPEP +F +L + + + LK+ L Sbjct: 117 H-VAYADPRRFGFMDLVASGELATCRHFAQMGPEPLSEAFTPDHLVAEARGRRTPLKSFL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q VAG+GNIYVCEALWRA+LSP R SL T +L+ IQ L DAI+A Sbjct: 176 LDQSTVAGLGNIYVCEALWRARLSPRRLAASLGPKRAT------RLVAAIQDALEDAIEA 229 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRDY DG++GYFQ+ F VY + GEPC CG+ I R Q+GRSTF CT CQ+ Sbjct: 230 GGSTLRDYHAADGAMGYFQHRFDVYDREGEPC-RQCGRSISRFAQSGRSTFSCTTCQR 286 >gi|27375873|ref|NP_767402.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] gi|39931278|sp|Q89WC9|FPG_BRAJA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27349011|dbj|BAC46027.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F A +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVVAEARRPDLRFPFQPDFVARLQGQVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPI-------KNPQHNHVTISLTNNTNTKKY 112 + +L +++HLGMSGSF +I+ + A P K+ H+HV +++ + Sbjct: 61 MADLASGDVLLMHLGMSGSFRVIKPDNDAAPGEFHYPRGKDTTHDHVLFRMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFG+M ++ + P LR LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGYMKVIARNALEDEPLLRGLGPEPLGNEFDAAMLARSCEGKATSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL R+ LSP R +L G P D +L+ I VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALHRSHLSPRRIAATLATRKGEPTDHAKRLVGAIHTVLNDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GE C + CG I+R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTTGELGYFQHSFKVYDREGETCKTPACGGTIKRFTQNGRSTFWCPKCQK 293 >gi|260574420|ref|ZP_05842424.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] gi|259023316|gb|EEW26608.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] Length = 283 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 184/297 (61%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM T+ ++R +LR+ FP + +A G +++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLEPVMAGQTIVAAQVNRPDLRWPFPPNMAARLTGARVLGLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L +L ++++HLGMSG ++ H + P K H+HV + + + R Sbjct: 61 LADLSSGETLLIHLGMSGRMLVSGAMLGQFHHAHPAPAK---HDHVVLDMESGA-----R 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V +ND RRFG MDL+ T +P L +LGPEP N+F+ L +N+ +K+ALL+ Sbjct: 113 VTFNDARRFGAMDLMATDGAESHPLLASLGPEPLGNAFDESVLAAALKNRNTPIKSALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIYVCE L+RA+L+P K SL TP+ L+ I++VL +AI+AGG Sbjct: 173 QHVVAGLGNIYVCEVLFRARLNPAAKAGSL-----TPEQT-ASLVPIIRQVLSEAIEAGG 226 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRDY DG +GYFQ+ F VY + G+PC + C I R+VQ+GRS+FYC CQ+ Sbjct: 227 SSLRDYRQTDGELGYFQHRFHVYDREGQPCATPGCPGHIERMVQSGRSSFYCPVCQR 283 >gi|254485969|ref|ZP_05099174.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] gi|214042838|gb|EEB83476.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] Length = 283 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGQVIARADVNRPDLRWPFPPDMAARLTGQKVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG +I + + + +H+HV + + N RV + Sbjct: 61 LADLSSGESLLIHLGMSGRMLISGDPLGQFVHDHPSPEKHDHVVLHMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N FN +L +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTQNADAHKLLASIGPEPLGNDFNEAHLVAVLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I++VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGKIAATR------VAGLVPIIRQVLEEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC + C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGDPCRAEECTGQIARIVQSGRSSFYCAQCQR 283 >gi|154254090|ref|YP_001414914.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] gi|171769697|sp|A7HZC4|FPG_PARL1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154158040|gb|ABS65257.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] Length = 293 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 130/304 (42%), Positives = 178/304 (58%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + R +LRF P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVRRGLAPALEGRRIVHVTQRRPDLRFPLPELFAKRLTGRRVIRLERRAKYI 60 Query: 61 LIELEGNLS------IIVHLGMSGSFIIEHTSCAKPIK--------NPQHNHVTISLTNN 106 L+ +E S +I+HLGMSG F + S + H+H+ + + Sbjct: 61 LVYMEPAKSGGAEDVLIMHLGMSGRFTVHGPSGSSAPGLFHLGMPGGETHDHIVFDMEDG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T RV+Y D RRFGFMDLV L LGPEP N F+A+ L + + + Sbjct: 121 T-----RVVYADHRRFGFMDLVAEPELASSRHLAALGPEPLGNEFSALVLAERLKGRRAP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL+Q+ VAG+GNIYVCEAL+RA +SP+R S+ P + +L I+ VL Sbjct: 176 IKSALLDQRTVAGLGNIYVCEALYRAGISPLRTAASI-----GPARV-ERLTAAIRAVLQ 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCT 285 DAI AGGS+LRDY DG +GYFQ+AF+VYG+ GE C CG +RRIVQ+ RSTFYC Sbjct: 230 DAIAAGGSTLRDYAATDGELGYFQHAFAVYGREGEACSKPGCGGTVRRIVQSARSTFYCP 289 Query: 286 YCQK 289 CQ+ Sbjct: 290 ACQR 293 >gi|56695071|ref|YP_165418.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] gi|81350839|sp|Q5LWT9|FPG_SILPO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56676808|gb|AAV93474.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] Length = 283 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGAVIARAEVNRPDLRWPFPDRMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHDHPAAQKHDHVVFHMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ ++ L LGPEP N F+ YL +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLMATATADEHKLLMVLGPEPLGNDFHEDYLVAALKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP RK + + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGVSPRRKAGQIAAAR------VSALVPIIRQVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC + C ++RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAGCDGTVQRITQSGRSSFYCAQCQR 283 >gi|126738631|ref|ZP_01754336.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] gi|126720430|gb|EBA17136.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] Length = 283 Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 124/294 (42%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGAVIKEARVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNPQ---HNHVTISLTNNTNTKKYRVIY 116 L EL+ ++++HLGMSG + + + ++PQ H+HV + N R+ + Sbjct: 61 LAELDTAETLLIHLGMSGRMTVSGDPLGQFVHEHPQAQKHDHVIFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADSHKLLAVLGPEPLGNDFHEEHLIAAFRGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+R +SP RK + + + L+ I+KVL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALYRCAISPKRKAGQISETR------VASLVPVIRKVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ GE C + CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREGEACRRDGCGGTISRITQSGRSSFYCGKCQR 283 >gi|328545945|ref|YP_004306054.1| formamidopyrimidine-DNA glycosylase [polymorphum gilvum SL003B-26A1] gi|326415685|gb|ADZ72748.1| Formamidopyrimidine-DNA glycosylase [Polymorphum gilvum SL003B-26A1] Length = 280 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/281 (44%), Positives = 170/281 (60%), Gaps = 10/281 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + +R +LRF FP F A G+ + +SRRAKYLL +L+ +++HLGMS Sbjct: 1 MEGARIRAVDRNRPDLRFPFPEDFEARLTGRNVTALSRRAKYLLADLDDGTVLVMHLGMS 60 Query: 78 GSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF IE S A K+P+H+HV L + T R+ YNDPRRFGFM L E Sbjct: 61 GSFRIEAGSGADMPGDFVHARSKDPRHDHVVFHLERSEGTA-VRITYNDPRRFGFMLLAE 119 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P +G EP N+ + L F K + LK ALL+Q ++AG+GNIYVCEAL Sbjct: 120 RAGLADHPLFARMGLEPLGNALDGAVLAQLFAGKRAPLKAALLDQGLIAGLGNIYVCEAL 179 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WRA LSP R+ S+ + KL I+ VL +AI+AGGSSLRD+ DGS+GYF Sbjct: 180 WRAGLSPTREAGSIAGGSPRGGARCEKLADAIRNVLEEAIEAGGSSLRDHARTDGSLGYF 239 Query: 250 QNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ F+VYG+ GEPC + C + RIVQ+ RSTF+C CQ+ Sbjct: 240 QHTFAVYGREGEPCRTPGCPGTVERIVQSNRSTFFCRRCQR 280 >gi|255263904|ref|ZP_05343246.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] gi|255106239|gb|EET48913.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/297 (43%), Positives = 178/297 (59%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + R +LR+ FP + + GK I + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPAMEGRRIFRADVRRPDLRWPFPKNMADRLTGKTIERLRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L +L ++I+HLGMSG +I H+ P K H+HV + R Sbjct: 61 LADLSSGETLIIHLGMSGRMLISGDQLGVFHSEHPAPEK---HDHVVFDMEGGA-----R 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V +ND RRFG MDL ET+ + ++ +GPEP N F+A YL + KNS +K+ LL+ Sbjct: 113 VTFNDARRFGAMDLAETATLEDHWLIKPIGPEPLGNQFDAAYLVDRLKTKNSPIKSVLLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IVAG+GNIYVCE L+RA + P RK L K + L+ I+ VL +AIDAGG Sbjct: 173 QRIVAGLGNIYVCEVLFRAGIHPARKAAKL------SKARIESLVPIIRDVLSEAIDAGG 226 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSL+DY DG +GYFQ+ F VY + G PC + CG I+RIVQ+GRS+FYC CQ+ Sbjct: 227 SSLKDYRQADGELGYFQHTFRVYDQEGNPCSAVGCGSTIKRIVQSGRSSFYCPTCQR 283 >gi|86139420|ref|ZP_01057989.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] gi|85823923|gb|EAQ44129.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] Length = 283 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIAQAHVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQ---HNHVTISLTNNTNTKKYRVIY 116 L EL+ +++VHLGMSG + + + + PQ H+HV + N RV + Sbjct: 61 LAELDRGETLLVHLGMSGRMTVSGDPLGQFVHDHPQAEKHDHVVFDMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ ++ L+ LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLIETAGLAEHKLLKVLGPEPLGNDFHEDHLIAAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA++ P RK L + L+ I++VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAQILPTRKAGQLSARR------VASLVPIIRQVLEDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ E C CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREAEACRRQGCGGTIARITQSGRSSFYCGKCQR 283 >gi|83941662|ref|ZP_00954124.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] gi|83847482|gb|EAP85357.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] Length = 283 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S++VHLGMSG +I + + + +H+HV + N RV + Sbjct: 61 LADLSSGESLLVHLGMSGRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L ++GPEP N F+ +L KN+ +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTASADSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGRIAAKR------VGSLVPIIRDVLNEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKRADGELGYFQHSFDVYGRAAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 283 >gi|260428860|ref|ZP_05782837.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] gi|260419483|gb|EEX12736.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] Length = 283 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNTIAKALVNRPDLRWPFPERMAERLTGARVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + + + +H+HV + L + R+ + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDLADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG M+L+ T+ Q+P L LGPEP N+F+ +L + +K+ALL+QKI Sbjct: 116 NDPRRFGAMNLMPTATAEQHPLLAALGPEPLGNAFSESHLMAALSGRTMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVSRISAKR------IASLVPVIRQVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC + C + + RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCRTPGCTETVHRIVQSGRSSFYCPSCQR 283 >gi|90421901|ref|YP_530271.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB18] gi|122477567|sp|Q21CD4|FPG_RHOPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90103915|gb|ABD85952.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB18] Length = 293 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 127/298 (42%), Positives = 175/298 (58%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + R +LRF + G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPAMAGARIDGFEARRADLRFALQPDLATRLIGQTVKGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKY 112 L EL +++HLGMSGSF + E + +P+ H+HV ++N Sbjct: 61 LAELSSGDVLLMHLGMSGSFRVLQGEASGAPGAFHHPRNDDRAHDHVVFRMSNGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M ++ P L+ LGPEP NSF+A L + ++LK ALL Sbjct: 117 -VVFNDPRRFGYMKILAPGEIADEPFLKGLGPEPLGNSFDAAMLASACAGRKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+ A LSP R +L G P + +L++ I+ VL AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFGAHLSPKRLAATLATRTGAPTERAERLVEAIRAVLHAAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+VY + GEPC S C +++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDREGEPCRSKGCDGVVKRFVQNGRSTFWCPKCQK 293 >gi|254563373|ref|YP_003070468.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens DM4] gi|254270651|emb|CAX26655.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens DM4] Length = 299 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 173/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE--HTSCAKP--------IKNPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + S P + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|163745032|ref|ZP_02152392.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] gi|161381850|gb|EDQ06259.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] Length = 283 Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGQVIARAEVNRPDLRWPFPDRMAERLTGQRVSLLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +LEG S++VHLGMSG ++ + N +H+HV + + N R+ + Sbjct: 61 LADLEGGESLLVHLGMSGRMLVSGDPLGQFQHNHPAPEKHDHVVLHMGNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ + L +LGPEP N F+ +L +N +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLNTADADAHKLLASLGPEPLGNDFHEAHLVAALKGRNMPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA + P RK + + + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGIHPARKAGRISASR------IAGLVPIIRQVLADAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ G+ C +C I RIVQ GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGKACRRPSCDGTIGRIVQGGRSSFYCPRCQR 283 >gi|240140864|ref|YP_002965344.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] gi|240010841|gb|ACS42067.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] Length = 299 Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 172/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE--HTSCAKP--------IKNPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + S P + P+H+HV + N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMVFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|310816813|ref|YP_003964777.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] gi|308755548|gb|ADO43477.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] Length = 286 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 127/297 (42%), Positives = 179/297 (60%), Gaps = 24/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ VM+ + + R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLLPVMEGQVIAAADVRRPDLRWPFPPDMAQRLTGKRVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFII--------EHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L +L+ ++++HLGMSG +I EH A P K H+HV + + Sbjct: 61 LADLDSAETLLIHLGMSGRMLISGVMIGEYEHAR-ALPEK---HDHVVLDMAGGA----- 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+ +ND RRFG MDL+ T Q P + LGPEP N F+ YL + + + +K+ALL Sbjct: 112 RIAFNDARRFGAMDLMATDAVDQNPLIAVLGPEPFGNDFSPAYLAARLAGRKTPIKSALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q IVAG+GNIYVCE L+RA++ P R L +L+ I+ VL +AI AG Sbjct: 172 DQHIVAGLGNIYVCEVLFRARIHPARLAGDLTALEAD------RLVPLIRDVLDEAIRAG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRDY DG++GYFQ+AF VYG+ G+PC + C + RIVQAGRS+F+C CQ Sbjct: 226 GSSLRDYQKTDGTLGYFQHAFQVYGREGQPCSTPGCIGTVARIVQAGRSSFFCPLCQ 282 >gi|89056701|ref|YP_512152.1| formamidopyrimidine-DNA glycosylase [Jannaschia sp. CCS1] gi|122497359|sp|Q28JI5|FPG_JANSC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|88866250|gb|ABD57127.1| DNA-(apurinic or apyrimidinic site) lyase [Jannaschia sp. CCS1] Length = 283 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 125/300 (41%), Positives = 182/300 (60%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ + ++R +LR+ FP + + G + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVLEGARIAQAAVNRPDLRWPFPDNMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSG----------SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG SF H + AK H+HV + Sbjct: 61 LADLDTGETLLIHLGMSGRMQISGDVIGSFHHTHPAAAK------HDHVVLDTDAGA--- 111 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T+ + Q+ LR LGPEP N+FN +L F K S +K A Sbjct: 112 --RITFNDARRFGAMDLMDTATQDQHWLLRDLGPEPLGNAFNEAHLVAAFKGKRSPVKTA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCEALWRA +SP+R+ + + L+ I+ VL +AI+ Sbjct: 170 LLDQRIVSGLGNIYVCEALWRAGISPLRQAGKIAAVR------VATLVPIIRDVLTEAIE 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD+ G +GYFQ+ F VYG+ G+ C + +C + I R VQ+GRS+FYC CQ+ Sbjct: 224 AGGSSLRDHRQATGELGYFQHTFRVYGREGQRCQTPDCAEKILRKVQSGRSSFYCPACQR 283 >gi|163853444|ref|YP_001641487.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] gi|229541074|sp|A9W8R7|FPG_METEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163665049|gb|ABY32416.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] Length = 299 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 172/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE--HTSCAKP--------IKNPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + S P + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|218532304|ref|YP_002423120.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] gi|254789442|sp|B7KN75|FPG_METC4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218524607|gb|ACK85192.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] Length = 299 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/299 (42%), Positives = 172/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE--HTSCAKP--------IKNPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + S P + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|114769647|ref|ZP_01447257.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] gi|114549352|gb|EAU52234.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] Length = 289 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 125/300 (41%), Positives = 187/300 (62%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKIVRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQGGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN YL + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNTPYLYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + D+L I++ VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRKK---IDVLVPFIRD---VLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD+ +G +GYFQ++F+VYG+ G+ C S NC ++I+RI+Q+GRS+FYC+ CQK Sbjct: 230 AGGSSLRDHRQANGDLGYFQHSFAVYGREGKKCNSVNCSELIKRIIQSGRSSFYCSKCQK 289 >gi|126734088|ref|ZP_01749835.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] gi|126716954|gb|EBA13818.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] Length = 283 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 185/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM+ + ++R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMEGHVIAQADVNRPDLRWPFPAQMAKRLTGKRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK---PIKNP-QHNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG +I + + P P +H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRMLISGHTVGEFHHPHPVPAKHDHVVFHMDDGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ET+ + + +R LGPEP N+FN YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMETATQDDHWLIRDLGPEPLGNAFNESYLIERLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VSGLGNIYVCEVLFRAGIHPARKAGRISAAR------VATLVPLIRDVLSEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + GEPC++ C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHVFQVYDREGEPCVTPGCDRTITRIVQSGRSSFFCPQCQR 283 >gi|84684525|ref|ZP_01012426.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus HTCC2654] gi|84667504|gb|EAQ13973.1| Formamidopyrimidine-DNA glycolase [Rhodobacterales bacterium HTCC2654] Length = 283 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/295 (43%), Positives = 174/295 (58%), Gaps = 18/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R+ LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGHRIARAEVRREGLRWPFPERMAERLTGATVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-----PIKNPQHNHVTISLTNNTNTKKYRVI 115 L +L+ N + ++HLGMSG +I T+ K P +H+HV + + R+ Sbjct: 61 LADLDTNETCLIHLGMSGRILISGTTLGKFHHEHPATE-KHDHVVLDMDGGA-----RIT 114 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ND RRFG MDL T +P + LGPEP N FN YL + KN+ +K+ALL+Q+ Sbjct: 115 LNDARRFGVMDLFTTGTGDLHPLIAALGPEPLGNEFNEGYLIAKLAGKNTPIKSALLDQR 174 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIYVCEAL+RA + P RK + + L+ I+ VL +AI AGGSS Sbjct: 175 IVAGLGNIYVCEALYRAGIHPARKAGRISAAR------IASLVPIIRDVLAEAIAAGGSS 228 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG +GYFQ+ F VY + G+PC + C I RIVQ+GRS+FYC CQ+ Sbjct: 229 LRDYRQADGELGYFQHTFRVYDQEGQPCKTPECQAKIARIVQSGRSSFYCPTCQR 283 >gi|302381128|ref|YP_003816951.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] gi|302191756|gb|ADK99327.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] Length = 287 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/296 (42%), Positives = 176/296 (59%), Gaps = 17/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ +T + +R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLVGAALTHVRQNRPDLRFPFPERFVERLSGAVVERIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-----PIKNPQHNHVTI-SLTNNTNTKKYRV 114 L L + + HLGM+G F ++ + PI +H H+++ +L + T R+ Sbjct: 61 LTALSTGETWVTHLGMTGRFTVDGEQLGEFEEPAPISG-KHEHMSLCALRDGAAT---RI 116 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q Sbjct: 117 GFADARRFGFMGLMATEAVDSHPWFAGLGPEPLGNGFSGAHLAEAFDGKKQNIKVSLLDQ 176 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + VAG+GNIYVCEAL+RA++SP I + L +L +++VL DAI AGGS Sbjct: 177 RTVAGLGNIYVCEALYRARISP------RIAAGKVSRPRLERLAVVVREVLNDAIAAGGS 230 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD+ + DG GYFQ+ F VYG+ G+PCL +C ++RRIVQ GRSTFYC CQ+ Sbjct: 231 TLRDFANADGGHGYFQHRFDVYGREGQPCLGEDCSGVVRRIVQGGRSTFYCPGCQR 286 >gi|254464049|ref|ZP_05077460.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] gi|206684957|gb|EDZ45439.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] Length = 283 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/294 (40%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVKRGLAPAMEGAVILKAAVNRPDLRWPFPPAMAERLTGARVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNPQ---HNHVTISLTNNTNTKKYRVIY 116 L +L+ + ++++HLGMSG + + + ++PQ H+HV + + N R+ + Sbjct: 61 LADLDTDETLLIHLGMSGRMTVSGDPLGQFVHEHPQAEKHDHVVLDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAAADSHKLLSVLGPEPLGNDFHEDHLVAAFRGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE+L+RA +SP RK + + + L+ I++VL +AI AGGSSL Sbjct: 176 IAGLGNIYVCESLFRAGISPRRKAGQIAAHR------VASLVPIIRQVLQEAIRAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F YG+ GEPC C I RI Q+GRSTFYC CQ+ Sbjct: 230 KDFRQASGELGYFQHSFDAYGREGEPCRREGCAGSIARITQSGRSTFYCVKCQR 283 >gi|83950593|ref|ZP_00959326.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] gi|83838492|gb|EAP77788.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] Length = 283 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGGTIARAEVNRPDLRWPFPDRMAERLAGQKVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + + + + +H+HV + + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDAQGRFVHDHPAPEKHDHVVLHMADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MD++ T +P L LGPEP N F+ Y + K+ALL+Q+I Sbjct: 116 NDPRRFGAMDILPTDGAEAHPLLAVLGPEPLGNGFHEEYFVAALKTRTMPAKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R+ +L + L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGISPKRRVNNLSSAR------IASLVPIIRDVLGDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ+ F VY + G+PC C ++ R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHNFDVYDREGQPCRRPGCDGIVARVVQSGRSSFYCPRCQR 283 >gi|126730152|ref|ZP_01745964.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] gi|126709532|gb|EBA08586.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] Length = 283 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/294 (40%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGQVIAHAQVNRPDLRWPFPERMAQRLTGAHVLQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L + ++++HLGMSG ++ + + + +H+HV + N RV + Sbjct: 61 LADLSTDETLLIHLGMSGRMLVSGDPLGQFVHDHPMPEKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L +GPEP N+F +L + +N+ +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMSTRAVDAHPLLARIGPEPLGNAFTESHLVERLKGRNTPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R+ + P R+ + + L+ ++ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRSGIHPARRCVRISAAR------ISTLVPIVRDVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC + C I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCKAPGCTGTIHRIVQSGRSSFFCPKCQR 283 >gi|259417901|ref|ZP_05741820.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] gi|259346807|gb|EEW58621.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] Length = 283 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ +T ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGEVITRADVNRPDLRWPFPDRMADRLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNPQ---HNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + +PQ H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHAHPQIAKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLDTATADSHKLLAVLGPEPLGNDFHENHLVTAFKGRKTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA +SP R+ + P+ + L+ I++VL+DAI AGGSSL Sbjct: 176 IAGLGNIYVCETLFRAGISPRREVGKI----SAPR--VAALVPIIRQVLLDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC + CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCGGTVTRITQSGRSSFYCGKCQR 283 >gi|297184285|gb|ADI20402.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium EB080_L43F08] Length = 289 Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 124/300 (41%), Positives = 189/300 (63%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKILRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQDGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN+ Y+ + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNSPYVYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + D+L +I++ VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRKK---IDVLVPIIRD---VLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSL+D+ +G +GYFQ++F+VYG+ G+ C S NC ++I+RIVQ+GRS+FYC CQK Sbjct: 230 AGGSSLKDHRQTNGDLGYFQHSFAVYGREGKKCNSANCSELIKRIVQSGRSSFYCAKCQK 289 >gi|89069834|ref|ZP_01157169.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] gi|89044635|gb|EAR50751.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] Length = 283 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 130/300 (43%), Positives = 180/300 (60%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ ++R +LR+ FP + G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPAMEGATIARAEVNRPDLRWPFPERLAERLTGRRVLRLGRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII----------EHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ELEG+ ++IVHLGMSG ++ EH + K H+HV + + + Sbjct: 61 LVELEGDETLIVHLGMSGRMVVSGDPLGQFHQEHAAAEK------HDHVVLHMASGA--- 111 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV +NDPRRFG MDL T + L LGPEP NSF+ YL + + + +K+A Sbjct: 112 --RVTFNDPRRFGAMDLWPTETLENHWLLAELGPEPLGNSFDETYLVARLRGRATPIKSA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IVAG+GNIYVCEAL RA + P RK + L L+ ++ VL +AI+ Sbjct: 170 LLDQRIVAGLGNIYVCEALHRAGIHPRRKAGRIAPAR------LAGLVPVVRAVLAEAIE 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRDY DG +GYFQ+ F VY + G PC C + RIVQ+GRS+FYC CQ+ Sbjct: 224 AGGSSLRDYRQADGELGYFQHTFEVYDREGHPCAKPGCAGTVARIVQSGRSSFYCPVCQR 283 >gi|99082869|ref|YP_615023.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. TM1040] gi|123077367|sp|Q1GC55|FPG_SILST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|99039149|gb|ABF65761.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Ruegeria sp. TM1040] Length = 283 Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIARADVNRPDLRWPFPDRMTERLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-KNPQ---HNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + +PQ H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHSHPQLEKHDHVVFHMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAKADSHKLLAVLGPEPLGNDFHESHLVSAFKGRRTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP R+ + + T L+ I++VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPRREAGKISTSRVT------SLVPIIRQVLQDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC + C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCTGTVTRITQSGRSSFYCGKCQR 283 >gi|254418470|ref|ZP_05032194.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] gi|196184647|gb|EDX79623.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] Length = 287 Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 125/295 (42%), Positives = 172/295 (58%), Gaps = 15/295 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + ++R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLTPVLAGARLSRVRINRPDLRFPFPDRFVERLEGATVQRIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+ L + I HLGM+G F ++ T A PI + ++ + +T R+ Sbjct: 61 LMPLSSGETWITHLGMTGRFTLDGTQLGEFEEAAPIAGKHEHFSGCAVRDGAST---RIG 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q+ Sbjct: 118 YADARRFGFMGLIPTDQVEVHPWFAGLGPEPLGNGFSGAHLVEAFVGKTQNIKVSLLDQR 177 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIYVCEAL+RA++SP L+ K L +L ++ VL DAI AGGS+ Sbjct: 178 IVAGLGNIYVCEALYRARISP------LVAAGSVSKVRLERLAAVVRDVLNDAIAAGGST 231 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 L+D+ + +G GYFQ+ F VYG+ G+ C C ++ RIVQ GRSTFYC CQK Sbjct: 232 LKDFANAEGGQGYFQHRFDVYGREGQACRGEGCSGVVARIVQGGRSTFYCPSCQK 286 >gi|209966315|ref|YP_002299230.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] gi|229541080|sp|B6IVU4|FPG_RHOCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209959781|gb|ACJ00418.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] Length = 290 Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 131/299 (43%), Positives = 177/299 (59%), Gaps = 19/299 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + + +R +LRF P F+A G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEMKIAGRVLVRVAQYRPDLRFPLPERFAARLTGLRVAGLFRRAKYL 60 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN-TKKYRVI 115 LI LEG+ L +VHLGMSG+ ++ H+H+ + + V Sbjct: 61 LIRLEGSAEGPLVWLVHLGMSGTLVVRRGPPGP---PGPHDHLVFETDPPPGEAQGWVVT 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YND RRFGFMDL +L +P L LGPEP N F+A L+ + K + +K ALL+Q Sbjct: 118 YNDVRRFGFMDLFPEALLDSHPMLACLGPEPLGNGFDAEELSRRLAGKITPIKAALLDQT 177 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCE+L+RA +SP R ++ +L+ I+ VL +AI AGGSS Sbjct: 178 VVAGLGNIYVCESLFRAGISPRRLAHTVAGRRAG------RLVPAIRDVLTEAIAAGGSS 231 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQM----IRRIVQAGRSTFYCTYCQK 289 LRDYV DG +GYFQ++F VYG+ GEPC +C + I RIVQ+GRSTFYC Q+ Sbjct: 232 LRDYVQSDGELGYFQHSFKVYGREGEPCPGCDCDPVRTGGIARIVQSGRSTFYCPRHQR 290 >gi|188583716|ref|YP_001927161.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] gi|229541075|sp|B1ZGU8|FPG_METPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|179347214|gb|ACB82626.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] Length = 296 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/299 (41%), Positives = 167/299 (55%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + L R NLRF FP F+ G + +++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARFARVTLRRPNLRFPFPERFAERLEGTTVRELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----------PIKNPQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRMPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T +G EP ++ + L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFAAMGVEPLSDALDGAVLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGAPTPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|126724501|ref|ZP_01740344.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] gi|126705665|gb|EBA04755.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] Length = 284 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 125/297 (42%), Positives = 179/297 (60%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ M T+T ++R +LR+ FP + + G+K++ +SRR+KY+ Sbjct: 2 MPELPEVETVRQGLLGAMDGATITKAEVNRPDLRWPFPENMAQRITGQKVLGLSRRSKYI 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ L ++I+HLGMSG + H P K H+HV + N + Sbjct: 62 LVSLASGETLIIHLGMSGRMTVSGDPLGQFHHEHPAPQK---HDHVVFHMDNGA-----Q 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V +NDPRRFG MDL + + + +GPEP N FNA YL + + +K ALL+ Sbjct: 114 VTFNDPRRFGAMDLATSDDIENHWLISKIGPEPLGNEFNAPYLVERLKTRAMPIKTALLD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IVAG+GNIYVCE L+RA +SP RK + + + L+ I+ VL +AI +GG Sbjct: 174 QQIVAGLGNIYVCEVLFRAGVSPQRKAKDISAKK------IGALVPIIRDVLSEAIVSGG 227 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 SSL+DY DG +GYFQ+ F VY + GE CL++ CG I RIVQ+GRS+F+C CQ+ Sbjct: 228 SSLKDYRQADGELGYFQHRFKVYDREGETCLNDGCGTEISRIVQSGRSSFFCKKCQR 284 >gi|329891039|ref|ZP_08269382.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] gi|328846340|gb|EGF95904.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 125/295 (42%), Positives = 177/295 (60%), Gaps = 15/295 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T +R +LRF FP F G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLEGARLTAPRQNRPDLRFPFPERFIERLEGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTNNTNTKKYRVI 115 L L + + HLGM+G F +E + P+ +H H +SLT + + R+ Sbjct: 61 LFPLSTGETWVTHLGMTGRFTLEGVAPGVFETDAPVIG-KHEH--MSLTADRDGALTRLG 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D RRFGFM L+ T + LGPEP N+F+ +L F K N+K +LL+Q Sbjct: 118 YADARRFGFMGLIPTEAVEGHAWFAKLGPEPLGNAFSGAHLAEAFAGKAQNIKVSLLDQS 177 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIYVCEAL+RA++SP+ + + P+ L +L E++ VL DAI AGGS+ Sbjct: 178 IVAGLGNIYVCEALYRARISPLTAAGEISR----PR--LERLAAEVRNVLGDAIAAGGST 231 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 L+D+ +++G GYFQ+ F VYG+ EPC + C +++RI Q GRSTF+C CQK Sbjct: 232 LKDFANVEGGQGYFQHRFDVYGREHEPCRTEGCRGVVKRIAQGGRSTFFCPLCQK 286 >gi|254453376|ref|ZP_05066813.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] gi|198267782|gb|EDY92052.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] Length = 283 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 124/297 (41%), Positives = 171/297 (57%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L+ M+ +T ++R +LR+ FP + G + + RR+KY+ Sbjct: 1 MPELPEVETVRAGLVPSMQGHVITRAEVNRPDLRWPFPDDMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L +L ++I+HLGMSG + H P K H+HV + N R Sbjct: 61 LADLSTGETLIIHLGMSGRMTVSGDPLGQFHHDHPAPAK---HDHVVFHMGNGA-----R 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V +NDPRRFG MDL +T + ++ +GPEP N FN YL F KN+ +K ALL+ Sbjct: 113 VTFNDPRRFGAMDLAKTDALNDHWLIKPIGPEPLGNGFNEAYLVKAFAAKNTPVKTALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+++AG+GNIYVCE L+RA + P RK + L + + L+ ++ VL AI AGG Sbjct: 173 QRLIAGLGNIYVCEVLFRAHIDPTRKAKDLSKKQ------IASLVPIVRDVLNKAIAAGG 226 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 SSL+DY DG +GYFQ AF Y + G PC + C I RIVQ+GRSTFYC CQ+ Sbjct: 227 SSLKDYRQADGELGYFQKAFQAYDRAGHPCQTPECTGSIARIVQSGRSTFYCPKCQR 283 >gi|170750114|ref|YP_001756374.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] gi|238688767|sp|B1LWY6|FPG_METRJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170656636|gb|ACB25691.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] Length = 296 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 171/299 (57%), Gaps = 17/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R NLRF FP F+A G+ + ++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPALVGARFSRVTLRRANLRFPFPERFAARLEGRTVTGLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIK--------NPQHNHVTISLTNNTNTK 110 L+ ++++HLGMSG F + S P P+H+HV ++++ Sbjct: 61 TAALDSGETLVMHLGMSGRFDVALPDGSNLSPGDFYLEGAQGTPKHDHVVMAMSTGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV ++ +G EP D A+ + F K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVPSAELAACRHFARMGVEPLDGLTGAV-IARLFRHKIAPLKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P SL + +G P L + I +VL +A+ Sbjct: 175 LLDQRLIAGLGNIYVCEALHRARLHPEAPAGSLARPDGRPTPEANALAKAIVQVLEEAVK 234 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DGS G FQ+AF VY + G PC C I RIVQA RSTF+C CQ Sbjct: 235 AGGSTLRDYAHTDGSAGAFQHAFRVYDRVGLPCSRPGCAGAITRIVQANRSTFFCATCQ 293 >gi|312114960|ref|YP_004012556.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] gi|311220089|gb|ADP71457.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 128/298 (42%), Positives = 173/298 (58%), Gaps = 17/298 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR L M+ + + L+R +LRF F F RG++I ++RRAKY+ Sbjct: 1 MPELPEVEIIRRGLAPAMEGAAFSAVTLNRADLRFPFEPRFVERLRGQRIARLTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---------KPIKNPQHNHVTISLTNNTNTKK 111 + E + L + +HLGM+G F IEH + + N H+HV +++N + Sbjct: 61 VAEADSGLCLAMHLGMTGRFTIEHKADGAVTPGSFYYEHAANALHDHVVFAMSNGEVIR- 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 YNDPRRFG+M L +P R LG EP ++ YL + K LK L Sbjct: 120 ----YNDPRRFGYMTLFGAGEMAAHPLFRALGIEPLSDALTPDYLAARAAGKAQALKAFL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAID 230 L+Q+I+AG+GNIYVCEAL+RA L P + +L + G K +L I+ VL DA+ Sbjct: 176 LDQRIIAGLGNIYVCEALFRAGLPPDAEAGALGVGRRG--KAAAARLCAAIKAVLEDALL 233 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGGSS+RDY H +G G+FQ F VYG+ GEPC + CG I R Q GRSTF+C +CQ Sbjct: 234 AGGSSIRDYRHANGDGGHFQEKFDVYGRGGEPCHNKCGSFIERKAQQGRSTFFCPHCQ 291 >gi|114799193|ref|YP_761947.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] gi|114739367|gb|ABI77492.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] Length = 297 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 125/295 (42%), Positives = 172/295 (58%), Gaps = 20/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF P F+ G +I ++R+AK+L Sbjct: 17 MPELPEVETVRRGLAPVMEGRRIVKLEQRRADLRFSLPERFAERLSGARIDRLARQAKFL 76 Query: 61 LIELEGNLSIIVHLGMSGSFII------EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L +++HLGM+G F I E A I H+HV + V Sbjct: 77 AAHLSTGEVLVMHLGMTGRFTIGGQMPGEFHYGAGGIA--AHDHVVFHMEGGET-----V 129 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 YNDPRRFGFM+L + YP L T+GPEP N F+ YL K + +K ALL+Q Sbjct: 130 TYNDPRRFGFMELWPAATFLAYPRLMTMGPEPLSNGFSHAYLDEALRGKAAPIKAALLDQ 189 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K++AG+GNIYVCEAL+R+ +SP R ++++ P +L I V+ +AI AGGS Sbjct: 190 KVIAGLGNIYVCEALFRSGISPKRLSKTI------PGQRAARLAPAINAVIAEAIAAGGS 243 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+ D+ DG++GYFQ+ F VY + G+ C S CG I+RIVQ+GRSTFYC CQ+ Sbjct: 244 SISDFAATDGALGYFQHRFDVYDREGQACKS-CGMEIKRIVQSGRSTFYCPSCQR 297 >gi|84501265|ref|ZP_00999470.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] gi|84390556|gb|EAQ03044.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] Length = 283 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 127/300 (42%), Positives = 177/300 (59%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + ++R +LR+ FP + + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRAGLAPAMEGEVIARAQVNRPDLRWPFPENMAGRLSGRRVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGS----------FIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG F+ EH + K H+HV + N Sbjct: 61 LADLDSQETLLIHLGMSGRMTVSGDPLGRFVHEHPAAEK------HDHVVFDMANGA--- 111 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV +NDPRRFG MDL+ T +P L +LGPEP N+FN Y + S +K Sbjct: 112 --RVTFNDPRRFGAMDLMATPETEAHPLLASLGPEPLGNAFNEAYFVAAVKHRRSPIKAV 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK+VAG+GNIYVCEAL+RA +SP R+ + L L+ I+ VL AI Sbjct: 170 LLDQKVVAGLGNIYVCEALYRAGISPSRRADRISVTR------LATLVPIIRDVLNAAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRDY DG +GYFQ++F VYG+ GEPC + C IRR VQ+GRS+F+C CQ+ Sbjct: 224 AGGSSLRDYRRADGELGYFQHSFDVYGREGEPCRTPGCSATIRRTVQSGRSSFHCPQCQR 283 >gi|298290594|ref|YP_003692533.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] gi|296927105|gb|ADH87914.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] Length = 299 Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 176/304 (57%), Gaps = 20/304 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LR+ P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMEGRRILAAVARRPDLRWPLPERFAERLTGRRIGRLGRRAKYL 60 Query: 61 LIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPI---------KNPQHNHVTISLTNN 106 + ++E +++HLGMSGSF IE + K H+HV + Sbjct: 61 VADIEPQDGAAPEVLVMHLGMSGSFRIEPDEGVPSVPGDFVMARSKTSAHDHVAFRMEGG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 V+YNDPRRFG M LV + +P R +GPEP FNA L + + Sbjct: 121 VE-----VVYNDPRRFGAMLLVPRAELDAHPLFRDIGPEPLGPGFNAESLAQALAGRRTP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+QK+VAG+GNIYVCEAL RA LSP R+ SL+ G P +L+ +++VL Sbjct: 176 IKAALLDQKVVAGLGNIYVCEALHRAGLSPERQAASLVTATGKPTAATRRLVGIVREVLE 235 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCT 285 +AI AGGS+LRD+ +DG++GYFQ+ F Y + GE CL+ C I R+VQ+GRSTFYC Sbjct: 236 EAIAAGGSTLRDHAQVDGTLGYFQHTFRAYDREGEACLTPGCRGTIARLVQSGRSTFYCA 295 Query: 286 YCQK 289 CQ+ Sbjct: 296 TCQR 299 >gi|291333254|gb|ADD92963.1| formamidopyrimidine DNA glycosylase [uncultured archaeon MedDCM-OCT-S04-C140] Length = 305 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 185/312 (59%), Gaps = 30/312 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ + N T+ ++ + R+ LR+ FP A G + + RRAKYL Sbjct: 1 MPELPEVETVRQGLLQGILNRTIEEVLIRREGLRYPFPKDL-ATIAGTTVTGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII----EHTSCAK----------PIKN--------PQHNH 98 LI+L+ + ++ HLGMSG + + E +S + P+ + +H+H Sbjct: 60 LIDLDDDRVLLSHLGMSGRYTLFDADEASSAPRHLLTTVNGGVPVSSFGERTGYGGKHDH 119 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + T+ + R +Y DPRRFG +DL + P L LGPEP D + A L Sbjct: 120 LEFIFTDGS-----RAVYTDPRRFGIVDLFHRMEEPVQPLLEILGPEPFD-PWGAGDLAA 173 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +++K ALL+QK V G+GNIY CE+L RA LSP R+ R L++ NG P L L+ Sbjct: 174 ALMGRKTSIKLALLDQKTVVGVGNIYACESLHRAGLSPRREARGLVKKNGQPTQRLESLV 233 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQA 277 I+ VL +A+ +GGS+L D+ +DG++GYF + F+VYG+ GE C + CG ++RRIVQ+ Sbjct: 234 LHIKTVLEEALASGGSTLNDFASVDGTLGYFSHQFAVYGREGEACTKDGCGGVVRRIVQS 293 Query: 278 GRSTFYCTYCQK 289 RSTFYC+ CQ+ Sbjct: 294 NRSTFYCSSCQR 305 >gi|254437279|ref|ZP_05050773.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] gi|198252725|gb|EDY77039.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] Length = 283 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/300 (41%), Positives = 177/300 (59%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + ++R +LR+ FP + +A G K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPSMQGHVIMRADVNRPDLRWPFPDNMAARLTGAKVTALRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFII----------EHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++I+HLGMSG + +H + AK H+HV + N Sbjct: 61 LADLDRGETLIIHLGMSGRMTVSGDPLGQFHHDHPAAAK------HDHVVFHMANGA--- 111 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV +ND RRFG MDL +T + ++ +GPEP N+F+ YL +N+ +K A Sbjct: 112 --RVTFNDARRFGAMDLTQTDTLDDHWLIKPIGPEPLGNTFDETYLIKALATRNTPIKTA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIYVCE L+RA+++P RK + L K + L+ I+ VL +AI Sbjct: 170 LLDQHVVAGLGNIYVCEVLFRARINPTRKAKDL------SKKRVASLVPIIRDVLTEAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSL+DY DG +GYFQ AF Y + G C + C I RIVQ+GRSTFYC CQ+ Sbjct: 224 AGGSSLKDYRQADGELGYFQKAFQAYDREGHICQTPECTGSIARIVQSGRSTFYCPTCQR 283 >gi|220926795|ref|YP_002502097.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] gi|254789443|sp|B8IIZ9|FPG_METNO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219951402|gb|ACL61794.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] Length = 297 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 124/299 (41%), Positives = 173/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGACFSHVHLARPDLRFPLPERFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPI--------KNPQHNHVTISLTNNTNTK 110 + +L ++I+HLGMSG F ++ P +H+HV+ +L+N Sbjct: 61 VADLSSGEALIMHLGMSGRFDVVLPDGRQVSPGDFYLEGAGARAKHDHVSFALSNGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV YND RRFGFMDLV + +G EP N + + F + + LK A Sbjct: 118 --RVTYNDVRRFGFMDLVPAAELATCRHFAGMGIEPLGNELSGEAVARLFRGRRTPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P +L G P L + I+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRARLHPETPAGALADAAGRPTKAARLLAEVIRDVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDYVH DG+ G FQ+AF VY + G C + C ++RR+VQ+GRSTF+C CQ Sbjct: 236 AGGSTLRDYVHTDGTKGAFQHAFRVYDREGLACTARGCRGVVRRVVQSGRSTFFCEVCQ 294 >gi|197106888|ref|YP_002132265.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] gi|229541078|sp|B4RC43|FPG_PHEZH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|196480308|gb|ACG79836.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] Length = 287 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 124/298 (41%), Positives = 171/298 (57%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V++ + + R +LRF P F G I+ + RRAKYL Sbjct: 1 MPELPEVETVRGGLAPVLEGRRLVRVEARRPDLRFPLPPGFVQILTGSTIVKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGMSG F I H + P +P+H HV Sbjct: 61 LGRLDREDTLVMHLGMSGRFEIAHPEGEERPGRFHYAPDPDPKHAHVVFETEAGV----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+ Y DPRRFG+M LV T+ +P LGPEP + F+A +L F + K LL Sbjct: 116 RITYYDPRRFGYMSLVNTATLDLHPWFAGLGPEPLSDDFDAAHLKAAFTGRRQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYVCEAL RA++SP + + + + L+ I+ VL +AI AG Sbjct: 176 DQRIVAGLGNIYVCEALNRARISPFKPAGRISRPR------IEVLVAAIKDVLREAIAAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ++F Y + G+PC ++ C +I R VQAGRSTFYC CQ+ Sbjct: 230 GSTLRDYAQADGALGYFQHSFRTYDREGQPCRNDGCRGVIGREVQAGRSTFYCPVCQR 287 >gi|218506631|ref|ZP_03504509.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli Brasil 5] Length = 246 Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 117/248 (47%), Positives = 156/248 (62%), Gaps = 10/248 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH-TSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + A P K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEGGAASAMPGQFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYV 240 GSSLRD++ Sbjct: 239 GSSLRDHI 246 >gi|85714159|ref|ZP_01045148.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] gi|85699285|gb|EAQ37153.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] Length = 276 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/280 (42%), Positives = 167/280 (59%), Gaps = 14/280 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ T+ + RK+LRF F F A G+ +I + RRAKYLL++L +++HLGMS Sbjct: 1 MEGATIIRAEIRRKDLRFPFQTDFVARLEGQTVIGIGRRAKYLLVDLASGDVLLMHLGMS 60 Query: 78 GSF-IIEHTSCAKPIKNPQ-------HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF +I+ A P Q H+HV ++++ +++NDPRRFG+M +V Sbjct: 61 GSFRVIDAAGVAAPGDFHQRRNEARAHDHVRFTMSSGAE-----IVFNDPRRFGYMKVVA 115 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L+ LGPEP N F+A L K ++LK ALL+Q++VAG+GNIYVCEAL Sbjct: 116 RAALGDEPLLKGLGPEPLGNEFDAAMLAQSCRNKKTSLKAALLDQRVVAGLGNIYVCEAL 175 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 +RA+LSP R +L G P + +L+ I VL AI AGGSSLRD+ G +GYF Sbjct: 176 FRARLSPRRLAATLALKTGAPSERAERLVAAIHDVLNQAIKAGGSSLRDHRRTTGELGYF 235 Query: 250 QNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q++F VY + G+ C + C +RR Q GRSTF+C CQ Sbjct: 236 QHSFQVYDREGDTCRMPACKGTVRRFTQNGRSTFWCPGCQ 275 >gi|329113491|ref|ZP_08242272.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] gi|326697316|gb|EGE48976.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] Length = 279 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 128/294 (43%), Positives = 175/294 (59%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIEGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ P H H+ + L N R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLD-----SPTTPLLHEHIVLILQNGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLAGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P +L TPK KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAPTMPACNLT----TPK--ARKLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC NC +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPC-PNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|258542328|ref|YP_003187761.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256633406|dbj|BAH99381.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256636465|dbj|BAI02434.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-03] gi|256639518|dbj|BAI05480.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-07] gi|256642574|dbj|BAI08529.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-22] gi|256645629|dbj|BAI11577.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-26] gi|256648682|dbj|BAI14623.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-32] gi|256651735|dbj|BAI17669.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654726|dbj|BAI20653.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-12] Length = 279 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 127/294 (43%), Positives = 177/294 (60%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS +G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIKGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ + P H HV + L + R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLDSPTEPLP-----HEHVVLILQDGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLVGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P ++ N TP KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAP-----TMPACNLTPPKAC-KLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC NC +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPC-PNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|170744299|ref|YP_001772954.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] gi|229541076|sp|B0UR68|FPG_METS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168198573|gb|ACA20520.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] Length = 297 Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 127/300 (42%), Positives = 170/300 (56%), Gaps = 18/300 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGARFTTVHLARPDLRFPLPARFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII-----------EHTSCAKPIKNPQHNHVTISLTNNTNT 109 + +L ++I+HLGMSG F + E P +H+HV +L+N Sbjct: 61 VADLSSGDALIMHLGMSGRFDVVFPDGRQLSPGEFYLEGAP-GQAKHDHVVFALSNGA-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 RV YND RRFGFMDLV + +G EP + + + F + + LK Sbjct: 118 ---RVTYNDVRRFGFMDLVRRAELETCRHFAGMGIEPLGSDLSGEAVARLFRGRRTPLKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q+++AG+GNIYVCEAL RA+L P +L G P +L Q I+ VL +A+ Sbjct: 175 ALLDQRLIAGLGNIYVCEALHRARLHPEAAAGTLADAAGRPTRAAARLAQVIRDVLTEAV 234 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DG+ G FQ+ F VY + G C + C +RRIVQAGRSTFYC CQ Sbjct: 235 AAGGSTLRDYAHTDGTQGAFQHRFRVYDREGLACTARGCRGRVRRIVQAGRSTFYCETCQ 294 >gi|326386384|ref|ZP_08208007.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] gi|326209045|gb|EGD59839.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 231 bits (589), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 167/290 (57%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ +T + + R +LR FP A G +++ + RRAKY Sbjct: 36 MPELPEVETTVRGLATVLAGERLTRVMVRRPDLRRPFPPDLVQALTGARVVALGRRAKYG 95 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 LI+ + +++ HLGMSG + I+ K H+H+ + T + RV+ ND Sbjct: 96 LIQTDRGRTMVFHLGMSGRWRIDPGEIGK------HDHLVL------ETARGRVLALNDA 143 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV+T+ + P LGPEP +L F + + +K LL+Q +VAG Sbjct: 144 RRFGSVDLVDTAALDAFGPFAALGPEPLGPGLTVAHLAQAFDGRVAAVKLVLLDQGVVAG 203 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL RA++ P R + L +L+ EI+ VL +AI+AGGS+LRDY Sbjct: 204 LGNIYVCEALHRARIHPERAA------GAVSRAALSRLVLEIRAVLEEAIEAGGSTLRDY 257 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ G+PC CG +RRIVQ GRSTF+C CQK Sbjct: 258 ARPDGELGYFAKEWRVYGREGKPC--GCGGTVRRIVQGGRSTFFCPRCQK 305 >gi|296283099|ref|ZP_06861097.1| formamidopyrimidine-DNA glycosylase [Citromicrobium bathyomarinum JL354] Length = 271 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/289 (41%), Positives = 165/289 (57%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + ++N T+T R ++R FP A G ++ + RRAK+ Sbjct: 1 MPELPEVETTVRGLALHLENRTITAARTARPDMRRPFPEGLEQALVGARVTSLGRRAKFG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ P + +H+H+ I +N R NDPR Sbjct: 61 LIHTDRDQTLIFHLGMSGRWRID------PEQPDRHDHLLIETESN------RFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV+T+ +P T+GPEP A +L + +K LL+Q+IVAG+ Sbjct: 109 RFGWVDLVDTAALDAWPSFVTMGPEPLGPDLTAAHLRAALAGRRQAIKLLLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRA++SP R L +L+ I++VL +I GGS+LRDY Sbjct: 169 GNIYVCEALWRARISPKRA------GGRVSLAALERLVTAIREVLEQSIRDGGSTLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G I RI Q GRST+YC CQ+ Sbjct: 223 RPDGELGYFSTRFDVYGRTGESCRREDGGHIARIEQGGRSTWYCPVCQR 271 >gi|167649030|ref|YP_001686693.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] gi|189044585|sp|B0T7D1|FPG_CAUSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167351460|gb|ABZ74195.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] Length = 287 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/297 (41%), Positives = 167/297 (56%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G KI+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-KP-------IKNPQHNHVTISLTNNTNTKKY 112 L+ L+ ++++HLGM+G F I S +P + +H HV + Sbjct: 61 LVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P +GPEP F+A L F+ + K LL Sbjct: 117 -VTYYDPRRFGFMDLIATDKVDRHPWFAAMGPEPLGEGFDAKTLVAAFNGRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK VAG+GNIYVCEAL RA +SP + + L L I+ VL +A++ G Sbjct: 176 DQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKR------LGPLTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+D+ DG++GYFQ+ F VY + G+PC + C MI R VQAGRSTF+C CQ Sbjct: 230 GSSLKDFAATDGALGYFQHRFRVYDREGQPCPTPGCKGMIGREVQAGRSTFFCPVCQ 286 >gi|87198620|ref|YP_495877.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] gi|123490611|sp|Q2GAT0|FPG_NOVAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|87134301|gb|ABD25043.1| DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] Length = 270 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 168/290 (57%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + + ++R +LR FP + A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLATVLDGQVIRRVAVNRADLRRPFPEDLAQALTGARVTGMGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 LI + +++ HLGMSG + I+ K H+H+ + T + RV+ ND Sbjct: 61 LIHTDRERTMVFHLGMSGRWRIDPEDIGK------HDHLVL------ETGEGRVLSLNDA 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV+T ++PP LGPEP A +L F + + +K LL+Q+IVAG Sbjct: 109 RRFGSVDLVDTGRLEEWPPFAALGPEPLGPGLKARHLAKAFEGRIAAVKLLLLDQQIVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL+RA++ P R + L L+ I+ VL ++I AGGS+LRDY Sbjct: 169 LGNIYVCEALYRARIHPER------EGGKVSARALGLLVPAIRAVLEESIAAGGSTLRDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +++RIVQ GRSTF+C CQK Sbjct: 223 ARPDGELGYFAKDWRVYGREGEPC--QCGGVVKRIVQGGRSTFFCPRCQK 270 >gi|332186406|ref|ZP_08388151.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] gi|332013774|gb|EGI55834.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] Length = 271 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 163/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ N + + R +LR FP G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLTPVLANERLMLVEPRRADLRHPFPADLRQRMTGARVTSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ P + H+H+ + R+ NDPR Sbjct: 61 LIDTDRGDTMIFHLGMSGRWRID------PGEPQTHDHLLLE-----TEAGRRLALNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+DL T+ YPP +GPEP FNA YL + + + +K LL+Q+IVAG+ Sbjct: 110 RFGFVDLWSTADLASYPPFLAMGPEPLSEDFNAAYLMERLEGRAAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R K L +L++ I+ VL AI AGGSSLRDYV Sbjct: 170 GNIYVCEALHMAGIAPGRA------GGQISKARLTRLVEAIRAVLNAAILAGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG ++RR +GRSTFYC CQ+ Sbjct: 224 RPDGELGYFSKEWRVYGREGEAC--ECGAIVRRRSDSGRSTFYCASCQR 270 >gi|85374938|ref|YP_459000.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] gi|122543790|sp|Q2N7Y8|FPG_ERYLH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84788021|gb|ABC64203.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] Length = 271 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T +R ++RF FP A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGERITRTVTNRPDMRFPFPDGLGQALTGATVVSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ P + +H+H+ I T +R DPR Sbjct: 61 LIHTDRDQTMIFHLGMSGRWRID------PDETDKHDHLLI------ETADHRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV T Q+P +GPEP ++ +L + +K LL+Q IVAG+ Sbjct: 109 RFGWVDLVGTQALDQWPGFAAMGPEPLGDALTIEHLRAALSGRKQAIKLCLLDQAIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A++ P RK + K L LI I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWHARIHP-RKAGGRVS-----KQALSLLITAIRDVLEQSIRDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+ G+PC + G IRR Q GRST+YC CQ+ Sbjct: 223 QPDGELGYFATRFQVYGRDGQPCHRDDGGTIRRFAQGGRSTWYCPRCQR 271 >gi|295691491|ref|YP_003595184.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] gi|295433394|gb|ADG12566.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] Length = 287 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 166/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRVTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I +P + +H HV Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFETEAGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P T+GPEP +F+ L F + K LL Sbjct: 117 -VTYYDPRRFGFMDLIPTDRVDRHPWFATMGPEPLGEAFDTRTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL RA +SP + ++ + L L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRAHISPFKPAGAVARKR------LGPLTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC + C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPGCKGIIAREVQAGRSTFFCPVCQ 286 >gi|84514657|ref|ZP_01002021.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] gi|84511708|gb|EAQ08161.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] Length = 283 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 117/294 (39%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM + ++R +LR+ FP + + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMTGQLIAKAEVNRPDLRWPFPENMADRLTGRRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK---PIKNP-QHNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG ++ + P P +H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRILVSGAAQGAFYHPHPAPAKHDHVVLHMDGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T+ + + +R LGPEP N+F+ YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMPTAAQDDHWLIRDLGPEPLGNAFDETYLVARLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGIDPRRKAGQIAARR------VASLVPLIRDVLHEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G PC++ +C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHGFQVYDREGAPCVTPDCARPISRIVQSGRSSFFCAQCQR 283 >gi|114326823|ref|YP_743980.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] gi|114314997|gb|ABI61057.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] Length = 300 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 121/297 (40%), Positives = 177/297 (59%), Gaps = 19/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LRF P +A G + D RR KY+ Sbjct: 8 MPELPEVETVMRGLRARLEGRRIVRAEVRRPDLRFPLPPGLAARLTGAYVRDFRRRGKYI 67 Query: 61 LIELEGNLSIIVHLGMSGSFIIE---HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+ L+G S+++HLGMSG F++ T+ + + +H HV++ + + Sbjct: 68 LMRLDGGDSLLIHLGMSGRFVLRAPADTTLPEGHEPERHEHVSMMAEDG-----WIAALV 122 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG MDLV T+ + + L ++GPEP +++F L F + + +K ALL+Q+IV Sbjct: 123 DPRRFGMMDLVPTAAEDAHRLLSSMGPEPLEDAFCLSGLEKAFAGRRTAVKLALLDQRIV 182 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA ++P+R L + L +LI I++ L +AI AGGSSLR Sbjct: 183 AGLGNIYVSEALFRAGINPLRAAGDLSRAE------LRRLIPAIRETLTEAIAAGGSSLR 236 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYV DG +GYFQ+A+ VYG+ G+PC LS Q I +IVQ GRST++C Q+ Sbjct: 237 DYVQPDGELGYFQHAWKVYGRAGQPCEHCPGLSAGCQGIVQIVQGGRSTYFCPCTQQ 293 >gi|329847536|ref|ZP_08262564.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] gi|328842599|gb|EGF92168.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] Length = 286 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 120/294 (40%), Positives = 166/294 (56%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + ++D+ LHR NLR+ FP F+ G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPYLDTAILSDVELHRPNLRYPFPERFADQLNGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-----KNPQHNHVTISLTNNTNTKKYRVI 115 L L+ + HLGM+G F +E + + +H HV+ T + +K Sbjct: 61 LFHLDIQKIWVTHLGMTGRFQVEQQALDGNYYHAVDTDSKHRHVSAIATRDGVARKLE-- 118 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + DPRRFGFM L+ + Y ++LG EP ++ + YL + +NLK L+ Q Sbjct: 119 FFDPRRFGFMLLLTPAELYATSWYQSLGVEPLSDALSPAYLLDMARDRKTNLKALLMAQG 178 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYVCEALWRAKLSP R L TPKD L I+ VL +A+ AGGSS Sbjct: 179 GIAGLGNIYVCEALWRAKLSPDRPAGKL-----TPKDA-EALTDAIKTVLEEAVAAGGSS 232 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D+ G +G FQ++F VY + G+PC G +I R V GRSTF+C CQ+ Sbjct: 233 ISDFTAATGELGLFQHSFCVYDRKGQPCRREDGGIIERKVHQGRSTFFCPKCQR 286 >gi|46201678|ref|ZP_00208205.1| COG0266: Formamidopyrimidine-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 122/293 (41%), Positives = 162/293 (55%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVARGLAQVWDGRRFVSVETRRSGLRVPFPKDFAQRLTGRRVESVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ L ++ HLGMSG I A P P H+HV + V DPR Sbjct: 61 VVRLDDGLVMLGHLGMSGRMTIGALRNAPP--GP-HDHVEWVTDAGIS-----VTLTDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E +P L +GPEP D+SF+A L K+ +K LL+Q+ VAG+ Sbjct: 113 RFGLFTLCEAGELAAHPLLAGIGPEPLDDSFDAKVLAQALKGKSGPIKTVLLDQRTVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + +L+ I+ VL +A+ AGGS+L+D+ Sbjct: 173 GNIYVCESLFRARISPLRPAGSLTKAE------TGRLVPLIKAVLTEAVAAGGSTLKDHA 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYFQ++F VYG+ GE C CG I RI QAGRSTFYC Q Sbjct: 227 RPDGELGYFQHSFQVYGREGEACPDCPGAPQCGG-ISRITQAGRSTFYCAKRQ 278 >gi|221236758|ref|YP_002519195.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] gi|22001594|sp|Q9A259|FPG_CAUCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789431|sp|B8GVY4|FPG_CAUCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|220965931|gb|ACL97287.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] Length = 287 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 117/297 (39%), Positives = 167/297 (56%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I +P + +H HV + Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL Sbjct: 117 -VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC + C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 286 >gi|83309731|ref|YP_419995.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] gi|82944572|dbj|BAE49436.1| Formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] Length = 308 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 164/294 (55%), Gaps = 20/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+ + V RRAKYL Sbjct: 30 MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 89 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G L ++ HLGMSG I P P H+HV + V DPR Sbjct: 90 VVRLDGGLVMLGHLGMSGRMTIGALRNEPP--GP-HDHV-----EWVTDQGISVTLTDPR 141 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E S +P L +GPEP D +F+A L K +K LL+QK+VAG+ Sbjct: 142 RFGLFALCEASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGL 201 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + + +L+ I+ VL +A+ AGGS+LRD+ Sbjct: 202 GNIYVCESLFRAEISPLRPAGSLSRAE------VGRLVPLIKAVLSEAVAAGGSTLRDHA 255 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYFQ++F VYG+ GE C CG ++ R+ QAGRSTFYC Q+ Sbjct: 256 RPDGELGYFQHSFQVYGREGETCPGCPGAPACGGIL-RMTQAGRSTFYCAKRQR 308 >gi|16127937|ref|NP_422501.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] gi|13425473|gb|AAK25669.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] Length = 315 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 167/297 (56%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+ Sbjct: 29 VPELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYI 88 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I +P + +H HV + Sbjct: 89 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT---- 144 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL Sbjct: 145 -VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLL 203 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ G Sbjct: 204 DQRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVG 257 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC + C +I R VQAGRSTF+C CQ Sbjct: 258 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 314 >gi|83855139|ref|ZP_00948669.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83842982|gb|EAP82149.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] Length = 266 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 113/277 (40%), Positives = 166/277 (59%), Gaps = 16/277 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + ++R +LR+ FP +A G+++ + RR+KY+L +L S++VHLGMS Sbjct: 1 MEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYILADLSSGESLLVHLGMS 60 Query: 78 GSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 G +I + + + +H+HV + N RV +NDPRRFG MDL++T+ Sbjct: 61 GRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTFNDPRRFGAMDLLDTASA 115 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + L ++GPEP N F+ +L KN+ +K ALL+Q+IVAG+GNIYVCE L+RA Sbjct: 116 DSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRIVAGLGNIYVCETLYRAG 175 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P RK + + L+ I+ VL +AI AGGS+LRD+ DG +GYFQ++F Sbjct: 176 IHPARKAGRIAAKR------VGSLVPIIRDVLNEAITAGGSTLRDFKRADGELGYFQHSF 229 Query: 254 SVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 DVYGREAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 266 >gi|162147553|ref|YP_001602014.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209545659|ref|YP_002277888.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|189044595|sp|A9HI30|FPG_GLUDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161786130|emb|CAP55712.1| putative formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209533336|gb|ACI53273.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 286 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 171/292 (58%), Gaps = 17/292 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + + T+ + + R +LRF FP A G I +RRAKY+ Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIARVAVRRADLRFPFPADLVARLEGATITGFARRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++++HLGMSG ++ A P+ + +H H T+ T R DPR Sbjct: 61 LIRLDTGDTLLLHLGMSGRVLLSLPGDA-PVPD-RHEHFFFETTDGT-----RCGLIDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ T+ + + L LGPEP N F+ +L ++ +++K ALL+Q +VAG+ Sbjct: 114 RFGAVDLMPTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALLDQTVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R +L +L+Q I+ VL +AI AGGSSLRDYV Sbjct: 174 GNIYVSEALFRAGIHPARLACTLDAAEDA------RLVQAIRAVLREAIAAGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG----QMIRRIVQAGRSTFYCTYCQ 288 DG +GYFQ+A+ VYG+ G+ C G + R+ QAGRS+F+C CQ Sbjct: 228 QPDGELGYFQHAWRVYGRAGQGCPDCPGPPACHGVERLEQAGRSSFFCPLCQ 279 >gi|296533913|ref|ZP_06896439.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] gi|296265767|gb|EFH11866.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] Length = 280 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 121/297 (40%), Positives = 172/297 (57%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ T+T +R+ +R+ FP +A G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLSRLLLGRTLTLAATNREGMRWPFPPGLAARLTGARVESFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L+ L G S+++HLGMSG + A+P+ + P H H+ + + RV + Sbjct: 61 LMRLSGGDSVLIHLGMSGRMV------ARPVGSNLPPPPHEHLVMQTDDGQ-----RVGF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG +DLV T+ + + L +GPEP + F L K + +K ALL+Q++ Sbjct: 110 ADPRRFGSVDLVPTAAEDGHKLLAGMGPEPLEEGFTPGILASALTGKKTPIKAALLDQRV 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV EAL+RA LSP R ++ P KL+ I+ VL +AI+AGGSSL Sbjct: 170 VAGLGNIYVAEALFRAGLSPRRLAHTI------PGARAEKLVPAIKAVLEEAIEAGGSSL 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG----QMIRRIVQAGRSTFYCTYCQK 289 RDYV DG +G+FQ+ F VY + G PC G + + RIVQ+GRSTFYC Q+ Sbjct: 224 RDYVQADGELGHFQDRFHVYDREGAPCPLCPGPPTCRGVSRIVQSGRSTFYCARTQR 280 >gi|85709426|ref|ZP_01040491.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] gi|85688136|gb|EAQ28140.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] Length = 271 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 159/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L+R +LR FP G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLDGERIERVTLNRPDLRRPFPPELVQVMTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++I HLGMSG + I+ P + +H+H+ + +R DPR Sbjct: 61 LIHLDRGATMIFHLGMSGRWRID------PEEADRHDHLLMEAAG------HRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL +T +P +GPEP F + L K+ ++K LL+Q+IVAG+ Sbjct: 109 RFGSVDLEQTDALDTWPQFAAMGPEPLGPDFTSEKLKSALKGKSQSIKLCLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWR+ + P++ + + L +L+ I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWRSGIHPLKAGGKVTRPQ------LARLVPAIRDVLTASIKDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G IRRI Q GRST+YC CQ+ Sbjct: 223 APDGELGYFATRFDVYGRTGELCRREDGGKIRRIAQGGRSTWYCAKCQR 271 >gi|149184948|ref|ZP_01863265.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] gi|148831059|gb|EDL49493.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] Length = 271 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ T+T + ++R ++R FP A G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGETITRVTVNRPDMRRPFPPDLVQALTGASVTHLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++ HLGMSG + I+ P ++ +H+H+ I T +R NDPR Sbjct: 61 LIHTSRDHAMVFHLGMSGRWRID------PAEDEKHDHLVI------ETAGHRFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ + + P LGPEP + +L + +K LL+Q IVAG+ Sbjct: 109 RFGSVDLMTSGELVTWKPFAALGPEPLGDDLTPEHLREATRGRKQAIKLLLLDQSIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A + P + + L +L+ I+ VL +I GGS+LRD+ Sbjct: 169 GNIYVCEALWHAGIHPRKAGGKVTMPQ------LRRLVPAIKDVLERSIRDGGSTLRDFA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG++GYF F VYG+ GEPC G IRRIVQ GRST++C CQ+ Sbjct: 223 QPDGNLGYFATRFHVYGREGEPCHHEDGGTIRRIVQGGRSTWFCPVCQR 271 >gi|307294070|ref|ZP_07573914.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] gi|306880221|gb|EFN11438.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] Length = 270 Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 123/290 (42%), Positives = 164/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLEGAVLTRVEARRADLRFPIPVDLRQRLTGATVTALSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 LI+ + ++I HLGMSG + I+ P + H+H+ I T R++ NDP Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRID------PAEIGAHDHLLI------ETGGGRLLSLNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV + Y P +GPEP F L K +++K ALL+Q+IVAG Sbjct: 109 RRFGSLDLVRSEAWEAYSPFTRMGPEPLGPDFTPDTLAAALKGKATSIKAALLDQRIVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL A ++P R+ + G + IL L++ I+ VL AI AGGS+LRDY Sbjct: 169 LGNIYVCEALNMAGIAPTREAGKI----GRARLIL--LVEAIRDVLAAAIAAGGSTLRDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC +CG IRR V GRSTF+C CQK Sbjct: 223 ARPDGELGYFSKQWRVYGREGEPC--HCGTPIRRRVDGGRSTFFCPKCQK 270 >gi|94495382|ref|ZP_01301962.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] gi|94424770|gb|EAT09791.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] Length = 270 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 160/290 (55%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSRLTRVEPRRADLRFPIPVDLRQRMTGAIVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 LIE + +I HLGMSG + I+ P + H+H+ + T + R++ NDP Sbjct: 61 LIETDRGDMMIFHLGMSGRWRID------PAEIGAHDHLLV------ETDQGRILSLNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV Y P +GPEP + F+ L + +++K ALL+Q+IVAG Sbjct: 109 RRFGSLDLVRADAWTGYAPFTRMGPEPLGDDFSPAMLATALKGRATSIKAALLDQRIVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL A ++P R + L L++ I+ VL AI AGGS+LRDY Sbjct: 169 LGNIYVCEALNMAGIAPTRAAGRIGAAR------LALLVEAIRTVLTAAITAGGSTLRDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +RR V GRSTFYC CQK Sbjct: 223 ARPDGELGYFSKQWRVYGREGEPC--PCGGTVRRRVDGGRSTFYCPTCQK 270 >gi|58040922|ref|YP_192886.1| formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] gi|81351172|sp|Q5FN17|FPG_GLUOX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58003336|gb|AAW62230.1| Formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] Length = 277 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 120/292 (41%), Positives = 164/292 (56%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + ++ + ++R +LR+ FP G ++ RRAKY+ Sbjct: 1 MPELPEVETVMRGFRDAFEGHRISHVTVNRPDLRWPFPADLREKLEGHHVLSFRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC-AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ LEG S+++HLGMSG I A P P H H+ + + R DP Sbjct: 61 LVRLEGGWSMLLHLGMSGRLTIGRAGTNATP---PAHEHLVLETDSGA-----RAGLVDP 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV TS + + L LG EP ++ L F + S +K+ALL+QK++AG Sbjct: 113 RRFGMVDLVRTSEEDSHRLLAHLGMEPLSDAMTGPALAELFRGRRSPIKSALLDQKLIAG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL+R + P R+ +L L + I ++L AI +GGSSLRDY Sbjct: 173 LGNIYVCEALFRCGIHPERQACTLTGEE------TAALAEAIPQILEQAIASGGSSLRDY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCG--QMIRRIVQAGRSTFYCTYCQK 289 V DG+ G FQ+ VYG+ G PC NCG I+RI QAGRSTF+C CQK Sbjct: 227 VQADGTKGAFQDLHLVYGREGVPC-PNCGAEHPIQRITQAGRSTFFCPTCQK 277 >gi|294679048|ref|YP_003579663.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] gi|294477868|gb|ADE87256.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] Length = 281 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 119/299 (39%), Positives = 170/299 (56%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGRVIDRAEVNRPDLRWPLPEAMAERLTGARVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSG----------SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L +L S+++HLGMSG F ++H + K H+HV + + Sbjct: 61 LADLSTGESLLIHLGMSGRMLVSGVMLGDFHLDHPAAQK------HDHVVLHMEGGA--- 111 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV +ND RRFG MDLV T + + L LGPEP N FN YL + S +K A Sbjct: 112 --RVTFNDARRFGAMDLVRTDREAAHWLLAGLGPEPFGNDFNEAYLIDALKSRKSPIKTA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIYV E L+RA + P R + L L+ I++VL +AI+ Sbjct: 170 LLDQHVVAGLGNIYVSEVLFRAGIDPRRAANRIAAAR------LAGLVPLIREVLAEAIE 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD+ DG +GYFQ++F VY + +PC + C I+RIVQ+GRS+++C CQK Sbjct: 224 AGGSSLRDHRQADGELGYFQHSFRVYDREDDPCPA-CATPIKRIVQSGRSSYFCPACQK 281 >gi|294010807|ref|YP_003544267.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] gi|292674137|dbj|BAI95655.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] Length = 270 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 163/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSLLTRVEPRRADLRFPIPADLRQRLTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 LI+ + ++I HLGMSG + I+ P + H+H+ I T R++ NDP Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRID------PAEIGAHDHLLI------GTGGGRLLALNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +DLV + + Y P +GPEP F L K +++K ALL+Q+IVAG Sbjct: 109 RRFGSLDLVRSEAREAYNPFTRMGPEPLGPDFTPDSLAAALKGKATSIKAALLDQRIVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYVCEAL A ++P R+ + + L L+ I++VL AI AGGS+LRDY Sbjct: 169 LGNIYVCEALNMAGIAPTREAGRIGRAR------LVLLVDAIREVLAAAIAAGGSTLRDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC+ CG IRR + GRSTF+C CQK Sbjct: 223 ARPDGELGYFSKQWRVYGREGEPCV--CGTPIRRRLDGGRSTFFCPKCQK 270 >gi|294085129|ref|YP_003551889.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664704|gb|ADE39805.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 170/289 (58%), Gaps = 12/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V+ V + + RK+LR+ P G + +RR KY+ Sbjct: 1 MPELPEVETVRSALAPVVTGQQVMAVYVGRKDLRWPLPEALDKQLLGCRFAAPTRRGKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +++HLGMSGS I AKP + +H+H+ +++ + +Y ++ NDPR Sbjct: 61 LMPNDNGQVLLIHLGMSGSIRIHE---AKP-ELAKHDHMMLTVEADDGGHRY-IVLNDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DL + L+ +GPEP N+F+A ++ F + S +KNALL+Q+++AGI Sbjct: 116 RFGWVDLFAAEDMATHKLLKDMGPEPLGNAFSATHIQTVFANRKSPVKNALLDQRLIAGI 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL+++ +SP R+ S+ KL I VL AI GG+SLRD+V Sbjct: 176 GNIYACEALFKSGISPRRRAGSITAGRAD------KLAHAIVTVLRAAIAEGGTSLRDHV 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G IGYF SVYG+ G PC+ C IR IVQ+GRS+FYC CQ+ Sbjct: 230 QPGGEIGYFVQKLSVYGRDGLPCVI-CETPIRIIVQSGRSSFYCPSCQR 277 >gi|119387217|ref|YP_918272.1| formamidopyrimidine-DNA glycosylase [Paracoccus denitrificans PD1222] gi|166215642|sp|A1BAN2|FPG_PARDP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119377812|gb|ABL72576.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccus denitrificans PD1222] Length = 281 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 172/294 (58%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + R +LR+ P G +++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLQPHLEGRVIARAEARRPDLRWPLPPDLVQVLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L ELE S+++HLGMSG +IE S P P+H+HV + N + R+ + Sbjct: 61 LAELEDRGSLLLHLGMSGRMLIEGESQGDFHRDPAILPRHDHVVL-----WNDQGTRITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG +DLV ++P L LGPEP ++F A L F + +K ALL+Q+I Sbjct: 116 NDARRFGMVDLVPPG--AEHPLLAHLGPEPLSDAFTAEALAAAFAGRRMPVKAALLDQRI 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV EAL+RA + P R ++ + L+ ++ VL +AI AGGSSL Sbjct: 174 VAGLGNIYVSEALYRAGIDPRRLAGAVTAPE------VAALVGHVRAVLEEAIAAGGSSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ++F VYG+ G PC + C ++RIVQ+GRS+F+C CQ+ Sbjct: 228 RDHRQATGELGYFQHSFRVYGREGAPCPTPGCTGTVQRIVQSGRSSFFCPLCQQ 281 >gi|163797306|ref|ZP_02191259.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] gi|159177397|gb|EDP61953.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] Length = 276 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 167/290 (57%), Gaps = 15/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LR+ P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVMRGLTPRLEGRILAHVEARRPDLRWPLPDGFAGRLMGRRVIGLRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ ++HLGMSG ++ + P +H+HV + + + + +ND R Sbjct: 61 LVDLDDGTCWMIHLGMSGRMLLSND--GDPAFQ-KHDHVVLR-----TDEGWWLRFNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T+ + L +GPEP N+F+A L + + +K ALL+Q++VAGI Sbjct: 113 RFGMMDLWPTADVENHRLLSGIGPEPLGNAFSASALETALEGRQTTIKAALLDQRVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL R+ ++P R + G + L+ I VL DAI AGGSSLRD+ Sbjct: 173 GNIYACEALHRSGIAP---KRLALNVRGARAE---ALVSAIGAVLTDAIAAGGSSLRDHR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ+AF VY + G+ C C ++RIVQ GRSTFYC CQ+ Sbjct: 227 QTSGELGYFQHAFGVYDREGQSCPKEGCQGTVQRIVQTGRSTFYCPSCQR 276 >gi|114778708|ref|ZP_01453520.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] gi|114551070|gb|EAU53632.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] Length = 271 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 113/288 (39%), Positives = 164/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++R L + + + HR +LR+ P S + G +I+ V RR+KYL Sbjct: 1 MPELPEVEVVRTGLEPCLIGRRILTVTCHRPSLRYPLPDMGSLS--GSRIVAVRRRSKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE+ ++ HLGM+G F + + +H HV I L + T+ + Y D R Sbjct: 59 LIEVSDGRVLVWHLGMTGQFHV----LGSEVSAGKHEHVRIDLDDGTSLR-----YRDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG+ L+ ++P TLGPEP ++FN YL + + +K +++ +V G+ Sbjct: 110 RFGYAGLLAADQLAEHPWFATLGPEPLGDAFNGAYLAELCRGRKAPIKTVIMDAHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R + G D+ L I+ VL +AI AGGS++ D+V Sbjct: 170 GNIYAAESLFRAGIHPGRAAGRI---AGARLDL---LASSIRDVLREAISAGGSTISDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +AF VYG+ G+PCL CG+ IRRI Q+GRS+FYC CQ Sbjct: 224 RADGRPGYFAHAFQVYGRKGQPCLV-CGEGIRRIQQSGRSSFYCIRCQ 270 >gi|315499380|ref|YP_004088184.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] gi|315417392|gb|ADU14033.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] Length = 293 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 116/302 (38%), Positives = 166/302 (54%), Gaps = 23/302 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ ++ + LHR NLR+ FP F+ G +I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPALEHAQLSGLRLHRPNLRYAFPERFAEQLEGAEILRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII------------EHTSCAKPIKNPQHNHVTISLTNNTN 108 L L+ + HLGM+G F + ++ +P +P+H HV + T Sbjct: 61 LFHLDTQAVWVTHLGMTGRFQVTDMNGHSLRLDGDYYHAVRP--DPRHLHVQVLATKEGV 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 T+ + + DPRRFGFM L+ Y + LG EP ++ N L F + + LK Sbjct: 119 TRL--IDFYDPRRFGFMLLLRPDDLYTQRWYKGLGLEPLSDALNTDALHALFSVRRTPLK 176 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + L++Q +++G+GNIYVCEALWRA LSP L L +++VL +A Sbjct: 177 SLLMDQTLISGLGNIYVCEALWRAGLSPDLPGNRLSHAKAA------LLTHAVREVLEEA 230 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYC 287 + AGGSS+ D+ G +GYFQ+ F VY + EPCL C I R +GRSTFYC C Sbjct: 231 VAAGGSSISDFTSASGELGYFQHRFRVYDREDEPCLRPGCAGTIARKTHSGRSTFYCPAC 290 Query: 288 QK 289 QK Sbjct: 291 QK 292 >gi|288959514|ref|YP_003449855.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] gi|288911822|dbj|BAI73311.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] Length = 280 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 120/294 (40%), Positives = 166/294 (56%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R NLR FP F G+++ + RRAKY+ Sbjct: 1 MPELPEVETVCRGLAPHLEGRRLVHVEQRRPNLRTPFPPRFCERLTGRRVEALRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ +IVHLGMSG II + +P +H+HV T V +ND R Sbjct: 61 LMDLDDGGVLIVHLGMSGRMII---APERPAAFDKHDHVVFETDAGTI-----VTFNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL +P LR LGPEP N+F+ L + K + +K ALL+Q IVAG+ Sbjct: 113 RFGLMDLTVADALADHPMLRNLGPEPLGNAFSGPELARRLAGKMTPIKAALLDQSIVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+++ + P R SL + +L ++ VL AI AGGSSLRDY Sbjct: 173 GNIYVSEALFQSGILPTRGAASLTGEE------VDRLAAAVRAVLERAIAAGGSSLRDYR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLS-NCGQM----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+ F+VY + GE C +C + ++RIVQ+GRSTF+C Q+ Sbjct: 227 QASGELGYFQHQFAVYDREGEGCPDCDCDRARTGGVQRIVQSGRSTFFCAARQR 280 >gi|144898444|emb|CAM75308.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum gryphiswaldense MSR-1] Length = 314 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 124/295 (42%), Positives = 169/295 (57%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R +LR P F+A G+++ V RRAKYL Sbjct: 37 MPELPEVETVARGLAAVWPGHRFIRVEARRPDLRKPLPADFAARLTGRRVESVGRRAKYL 96 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ L+++ HLGMSG+ +I P P H+HV + T V Y DPR Sbjct: 97 LVHLDDGLTLLGHLGMSGAMVISKGRNEPP--GP-HDHVEFVSDDGTM-----VTYRDPR 148 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T +P L LGPEP F+ L K +++K ALL+Q +VAG+ Sbjct: 149 RFGLMDL--TLDPSTHPLLAHLGPEPLGPDFHEKALAQTLDGKGASIKAALLDQNVVAGL 206 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E+L+ + + P R SL P++I KL+ I+ VL AI AGGSSL+D+V Sbjct: 207 GNIYVSESLFLSGIDPTRAAGSL-----KPREI-NKLVPAIRAVLERAIAAGGSSLKDHV 260 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC------LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYFQ++F+VY + GE C ++ G I+RIVQ+GRSTFYC Q+ Sbjct: 261 QPNGELGYFQHSFTVYDRAGEACPGCDCDIARTGG-IQRIVQSGRSTFYCAKKQR 314 >gi|148260719|ref|YP_001234846.1| formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] gi|166215604|sp|A5FZ95|FPG_ACICJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146402400|gb|ABQ30927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] Length = 275 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 165/293 (56%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ + P+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTID----SAPLP---HQHLTLETDDGAV-----IGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGRAG------RLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC G I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPCERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|326403916|ref|YP_004283998.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] gi|325050778|dbj|BAJ81116.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] Length = 275 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 165/293 (56%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ + P+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTID----SAPLP---HQHLTLETDDGAI-----IGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGRAG------RLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC G I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPCERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|58584846|ref|YP_198419.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497735|sp|Q5GS47|FPG_WOLTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58419162|gb|AAW71177.1| Formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 271 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/288 (39%), Positives = 167/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEII L +KN ++ + ++ NLR + +GK I ++ RR KY+ Sbjct: 1 MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++ + VHLGMSG I A+ +H+HV S ++NT+ +I+NDPR Sbjct: 61 IWHIDNDIVVTVHLGMSGKLIYAKGEQAQ----NKHDHVIFSFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ + + G EP + FN YL K N+K+AL+N K++ GI Sbjct: 112 KFGLVIILNKEQEVNF--FNDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R + L T K+ KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRSAQDL-----TYKE-CEKLATEIKNTLSDAIIAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+GYFQN+F VYGK +PC C I I Q GRST++C CQ Sbjct: 224 QPSGSVGYFQNSFYVYGKVQKPC-KICNNTITLIRQNGRSTYFCNACQ 270 >gi|42523639|ref|NP_969019.1| hypothetical protein Bd2176 [Bdellovibrio bacteriovorus HD100] gi|39575845|emb|CAE80012.1| fpg [Bdellovibrio bacteriovorus HD100] Length = 271 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 167/290 (57%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + + L RK+LR P + G+ + + RRAKY Sbjct: 2 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + A P H+H+ + + + R+ Y DP Sbjct: 62 LLLWTPKG-AMLSHLGMTGTWRV-----AVPGDERLHDHIYLHFSGD-----LRLAYRDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ LK+ P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 111 RRFGCFDFVQDPLKH--PKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 169 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 223 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 271 >gi|90101295|sp|Q6ML45|FPG_BDEBA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 167/290 (57%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + + L RK+LR P + G+ + + RRAKY Sbjct: 1 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + A P H+H+ + + + R+ Y DP Sbjct: 61 LLLWTPKG-AMLSHLGMTGTWRV-----AVPGDERLHDHIYLHFSGD-----LRLAYRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ LK+ P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 110 RRFGCFDFVQDPLKH--PKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 168 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 222 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 270 >gi|148557778|ref|YP_001265360.1| formamidopyrimidine-DNA glycosylase [Sphingomonas wittichii RW1] gi|166198754|sp|A5VG06|FPG_SPHWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148502968|gb|ABQ71222.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingomonas wittichii RW1] Length = 270 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + R +LR FP G I + RRAKY Sbjct: 1 MPELPEVETTVRGLRPPLEGRRLTRVETRRADLRRPFPADLRQRMTGATITGLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + ++ HLGMSG + I+ P + H+H+ + T+ T + DPR Sbjct: 61 LIETDRGDVMVFHLGMSGRWRID------PSEIGAHDHLVLE-TDEGRT----LSLCDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + P + LGPEP +L + + +K LL+Q+IVAG+ Sbjct: 110 RFGSVDLVRGEELAGFGPFKALGPEPLGPDLTGAHLAGALEGRVAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL ++P + + L +L+ I++VL AI+AGGS+LRDY Sbjct: 170 GNIYVCEALHMTGIAPTTMAGRIAKKR------LDRLVDSIREVLAAAIEAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC +CG +IRR V GRSTFYC CQK Sbjct: 224 RPDGELGYFAKQWRVYGREGEPC--HCGTVIRRRVDGGRSTFYCPKCQK 270 >gi|58696959|ref|ZP_00372449.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225630828|ref|YP_002727619.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] gi|254789456|sp|C0R4I6|FPG_WOLWR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58536803|gb|EAL60033.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225592809|gb|ACN95828.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] Length = 271 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 167/289 (57%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +G++++I+HLGMSG I EH +H+HV ++NT+ +I+NDP Sbjct: 61 IWNTDGSMAVIIHLGMSGKLIYAEHDQAQN-----KHDHVVFLFSDNTS-----IIFNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + ++ + + G EP + F+ YL K +N+K+AL++ K++ G Sbjct: 111 RRFGLVIVLNKEQEINF--FDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 169 VGNIYASESLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 223 AQPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|103488662|ref|YP_618223.1| formamidopyrimidine-DNA glycosylase [Sphingopyxis alaskensis RB2256] gi|123077974|sp|Q1GN82|FPG_SPHAL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|98978739|gb|ABF54890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingopyxis alaskensis RB2256] Length = 270 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 163/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ ++ + + R +LR FP + G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLVPFLEGQRLAAVTTFRPDLRRPFPVDLAQRLTGATVTRLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +I HLGMSG + T +P K H+H+ + +R+ +DPR Sbjct: 61 IVSTDRDDHMIFHLGMSGRW---RTEGGEPGK---HDHLLLE-----TGAGHRLFLHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + TLGPEP + F+A L F + + +K LL+Q +VAG+ Sbjct: 110 RFGSIDLVAGDPLASFAAFVTLGPEPLSDDFDAALLARAFAARRAPVKAMLLDQNVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A++SP L+ G PK L L+ I+ VL AI AGGS+LRD++ Sbjct: 170 GNIYVCEALNMARISP------LMPAAGVPKAKLAALVSAIRAVLTAAIAAGGSTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG I R+VQ+GRSTFYC CQ+ Sbjct: 224 SPDGDLGYFAKDWRVYGREGEAC--ECGGAIVRVVQSGRSTFYCRKCQR 270 >gi|254455806|ref|ZP_05069235.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] gi|207082808|gb|EDZ60234.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] Length = 287 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 122/302 (40%), Positives = 181/302 (59%), Gaps = 28/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+R++L +K V + + +NLRF P +FS+ KKII V R +KYL Sbjct: 1 MPELPEVEIVRQSLNKKIKQKKVKKVIVRNRNLRFKIPLNFSSYFENKKIIKVERFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF---------IIEHTSC-AKPIKNPQHNHVTISLTNNTNTK 110 ++ L ++ ++HLGMSG+ II +TS P +HNHV I + Sbjct: 61 ILYLSKSIYCLIHLGMSGTIHIIENKMNNIITNTSFYNSPTLPKKHNHVEIIF------E 114 Query: 111 KYRVIYNDPRRFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K++V+YNDPRRFGF +++ +LK ++ LGPEP D +F+ Y+ + F KN ++K Sbjct: 115 KFKVVYNDPRRFGFFQIIKNKKNLKERF---NHLGPEPFDLNFDLNYVYNYFKYKNRDIK 171 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 N LL+QK ++G+GNIY E L+++K+ P RK L K+ K+I +K+L+ A Sbjct: 172 NLLLDQKFISGVGNIYASEILFKSKIHPYRKVCFL------SKEECKKIILNSKKILLKA 225 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYC 287 I GGSS+RD+ + GS G FQN F VY + G C + C +I++ + + RSTF+C C Sbjct: 226 ISKGGSSIRDFKNTSGSKGGFQNEFKVYQQQGMKCKNFRCTDLIKKKISSNRSTFFCESC 285 Query: 288 QK 289 QK Sbjct: 286 QK 287 >gi|56552083|ref|YP_162922.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] gi|59802555|sp|Q9X3X1|FPG_ZYMMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56543657|gb|AAV89811.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 270 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 160/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + R +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTIRGLSEVLMGEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I P +H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKI------NPENFEKHDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R +GPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNIGPEPLTGNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L D + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNL------NFDEITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQC--ECGHTIERYTLGGRSTFLCSSCQK 270 >gi|190571281|ref|YP_001975639.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018676|ref|ZP_03334484.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238066647|sp|B3CM71|FPG_WOLPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190357553|emb|CAQ54990.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995627|gb|EEB56267.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 271 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L +KN ++++ ++ NLR + +GK I D+ RR KY+ Sbjct: 1 MPELPEVEVISNFLFDKIKNKKISNVTVNNWNLRVPITKNIDDLLKGKVINDIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++++I+HLGMSG I + A+ +H+HV ++NT+ +I+NDPR Sbjct: 61 ISNIDASMAVIIHLGMSGKLIYVEDNQAQ----NKHDHVIFLFSDNTS-----LIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + LG EP + F+ YL + +N+K+ L+N K++ G+ Sbjct: 112 RFGLVIVLNREQELNF--FNNLGIEPLTDEFDGHYLQKLLKNRKANIKSVLMNNKLIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY----KLIQEIQKVLIDAIDAGGSSL 236 GNIY E+L+RA++SP+R +D+ Y KL EI+ L DAI AGGS+L Sbjct: 170 GNIYASESLFRARISPLR----------LAQDLTYIECEKLAIEIKNTLSDAIAAGGSTL 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DY GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 220 KDYAQPSGSAGYFQNNFYVYGKVQKPCRI-CNNIITLIRQNGRSTYFCNACQ 270 >gi|83595128|ref|YP_428880.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] gi|123525348|sp|Q2RMQ2|FPG_RHORT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83578042|gb|ABC24593.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] Length = 281 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 113/295 (38%), Positives = 161/295 (54%), Gaps = 20/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + ++ + R LR P GK + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPALVGERLSRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++HLGMSGS + A + H+H+ RV + DPR Sbjct: 61 LLRMIDGPVALIHLGMSGSMTV--GPLAGHAEPGPHDHILFE-----TEAGLRVTFRDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E +P L LGPEP +F+A L + + + + +K ALL+Q +VAG+ Sbjct: 114 RFGLITLAEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLDQGVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA +SP+R S+ L+ I+ VL +AI AGGSSLRD+ Sbjct: 174 GNIYVSEALFRAGISPLRPAASVTGAWAE------ALVAAIRAVLGEAIAAGGSSLRDHR 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPC------LSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG++GYFQ+ F+VY + G+PC ++ G I R+VQ+GRSTF+C Q+ Sbjct: 228 QTDGALGYFQHRFAVYDRVGQPCPGCDCDVARTGG-IERMVQSGRSTFFCGRRQR 281 >gi|260752387|ref|YP_003225280.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551750|gb|ACV74696.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 270 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 159/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTVRGLSEVLMGEKIIDVKVRGASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I P +H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKI------NPENFEKHDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R LGPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNLGPEPLTRNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L D + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNL------NFDEITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQC--ECGHTIERYTLGGRSTFLCSSCQK 270 >gi|99034656|ref|ZP_01314602.1| hypothetical protein Wendoof_01000584 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 349 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 79 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 138 Query: 61 LIELEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +G++++I+HLGMSG I +H ++N +H+HV ++NT+ +I+NDP Sbjct: 139 IWNTDGSVAVIIHLGMSGKLIYADHDQ----MRN-KHDHVVFLFSDNTS-----IIFNDP 188 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + ++ + + G EP + F+ YL K N+K+AL++ K + G Sbjct: 189 RRFGLVIVLNKEQETDF--FSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVG 246 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 247 VGNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDY 300 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 301 AQPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 348 >gi|42520959|ref|NP_966874.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652197|sp|Q73G10|FPG_WOLPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42410700|gb|AAS14808.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 271 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +G++++I+HLGMSG I +H ++N +H+HV ++NT+ +I+NDP Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQ----MRN-KHDHVVFLFSDNTS-----IIFNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + ++ + + G EP + F+ YL K N+K+AL++ K + G Sbjct: 111 RRFGLVIVLNKEQETDF--FSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 169 VGNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 223 AQPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|224823788|ref|ZP_03696897.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] gi|224604243|gb|EEG10417.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] Length = 272 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+TD+ + LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLTGATITDVVVREGRLRWPVPPALAATLSGLPVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +++VHLGMSGS + A +H+H+ + L T + Y DPR Sbjct: 61 LLEFASG-TLLVHLGMSGSLRL----VAADTPPQKHDHIDLILDGRTALR-----YRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M +++ +P L LGPEP ++F+A L + +++K L++ +V G+ Sbjct: 111 RFGAMLWHIGPVEF-HPLLAALGPEPLGDAFDADTLYRASRGRTTSIKQLLMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R R L + +L I+ +L AI+AGGS+LRD+V Sbjct: 170 GNIYANESLFQAGIRPGRAARRLTHAD------CERLAAAIKSILARAIEAGGSTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYFQ ++VYG+ EPC CG +IR+I Q RS++YC +CQ Sbjct: 224 GASGKPGYFQQTYAVYGRAEEPC-HTCGSLIRQIRQGQRSSYYCPHCQ 270 >gi|225023717|ref|ZP_03712909.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] gi|224943599|gb|EEG24808.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] Length = 273 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M+ TV ++ + + LR+ + I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYMQGKTVAEVVVRQPKLRWPVSPDLAQQLASSHIVYIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +++HLGMSGS + A P + +H+H+ I + T + DPR Sbjct: 61 LFEFPHGV-MLLHLGMSGSLRVYPNDSAPPPE--KHDHIDIITVDQTVLR-----LRDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T Q+P L+ LGPEP F + YL + ++ S +K AL++ K+V G+ Sbjct: 113 RFGSV-LWFTGAAEQHPLLQHLGPEPLQEEFTSGYLKNALSRRKSAIKTALMDNKVVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + +L+ EI+ VL AI+ GGSSLRD+V Sbjct: 172 GNIYANEALFAAGILPTRRA------DRVSAEECRRLVVEIRNVLHCAIEVGGSSLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H DG GYFQ + VYG+ GEPC +CG I R + RS+FYC CQ+ Sbjct: 226 HSDGQSGYFQQQYHVYGREGEPC-HHCGTPIARQIVGQRSSFYCPKCQR 273 >gi|149195827|ref|ZP_01872884.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] gi|149141289|gb|EDM29685.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] Length = 276 Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 164/292 (56%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L ++ T+ + LR + F+ GKKI + RR+KY Sbjct: 1 MPELPEVETVKNALAPYIEGETIKSFHFYTPRLRQELDAALFNKTFSGKKITRLKRRSKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL E + I+ HLGM+GS+ I C + +H H++I L N+ + Y DP Sbjct: 61 LLFEFDDQKWILSHLGMTGSWRI----CKLTEERKKHEHISIRLDNDQELR-----YCDP 111 Query: 120 RRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG ++ L P L LGPEP D S++ YL K +KN +++ + V Sbjct: 112 RRFGEFRVITAPLDSTTDPQALSHLGPEPFDESYSQEYLWDLSRSKTKPIKNFIMDPRTV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+R +SP+RKT+ L + KD L LI Q VL AIDAGG+++ Sbjct: 172 CGIGNIYASETLFRCGISPLRKTQKLRK-----KDCL-NLINHSQSVLQSAIDAGGTTII 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DGS G+F +VYG+ GE C+ C ++I+RIVQAGRS+FYC CQK Sbjct: 226 DFQAPDGSEGWFHQQLNVYGREGEDCV-QCDKIIKRIVQAGRSSFYCPGCQK 276 >gi|218678413|ref|ZP_03526310.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 894] Length = 230 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/232 (45%), Positives = 138/232 (59%), Gaps = 10/232 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGARVTRLELRRADLRFPFPDALADRVSGRIIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH-TSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE A P K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAGAATPGEFHHARSKDEKHDHVVFHLEGASGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVIYNDPRRFGFMDMVERADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +QK +AG+GNIYVCEALWR+ LSP + R ++ L L+ I+ V Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPGPRRRHAGDGGWPAEEQLNLLVAAIRDV 230 >gi|114332459|ref|YP_748681.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas eutropha C91] gi|122312915|sp|Q0AD66|FPG_NITEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114309473|gb|ABI60716.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosomonas eutropha C91] Length = 271 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 163/291 (56%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + +T + + LR+ G++I ++RRAKYL Sbjct: 1 MPELPEVEVTRRGIDAHLAGRYITQVKIRNYALRWPVSPELITLLPGQRINTITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYND 118 L ++I+HLGMSGS + P+ P H+H + L N + + D Sbjct: 61 LFACSKG-TLIIHLGMSGSLRV------LPVSTPSLLHDHFELWLDNEKMLR-----FRD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + ++ Q+P L+ LGPEP ++FN ++L + +++ ++K AL+NQ IV Sbjct: 109 PRRFGVILWWDGDVR-QHPLLQKLGPEPLSDAFNGLFLHEKIQRRSISIKEALMNQHIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ A +SP LI + +L+ ++ L AI+AGGSSLRD Sbjct: 168 GIGNIYANEALFHAGISP------LIAAGSLSTALCARLVDAVKMTLQRAIEAGGSSLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DGS G FQ + VYG+TG+PC CG ++ + Q RS+F+C CQK Sbjct: 222 FTDCDGSPGCFQQQYWVYGRTGQPC-RKCGALVSKTRQGQRSSFFCAQCQK 271 >gi|161507869|ref|YP_001577833.1| formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260103164|ref|ZP_05753401.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|172048344|sp|A8YWE6|FPG_LACH4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160348858|gb|ABX27532.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260083023|gb|EEW67143.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|328464767|gb|EGF36085.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus helveticus MTCC 5463] Length = 276 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 162/288 (56%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTSDAPKD-KHDHVEFIFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P L Q N P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHP------LSQANKIPAEKVMELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|296115226|ref|ZP_06833867.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] gi|295978327|gb|EFG85064.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 107/283 (37%), Positives = 157/283 (55%), Gaps = 20/283 (7%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + + ++ + R+ LR+ FP + RG+ I RR KY+L+ L+ ++ Sbjct: 2 RGMRLHLEGHQIATATPLREGLRWPFPPGLGDSLRGRVIARFERRGKYILVHLDDGQVLL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSG ++ H + + +H H+ I + R DPRRFG +DL+ Sbjct: 62 MHLGMSGRVVLGHDTT---VPAARHEHLVI-----VTVQGARCGLVDPRRFGIVDLLAPG 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P L +GPEP N F+A+ L + S +K LL+Q++VAG+GNIYV EAL+R Sbjct: 114 TAMSHPLLARMGPEPLGNGFDAVGLARAARGRRSPIKALLLDQRVVAGLGNIYVSEALFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P R SL + L+ I+ VL +AI AGGSSLRDYV DG +GYFQ+ Sbjct: 174 AGVHPERAGASLDEAQ------CAALVASIRDVLTEAIAAGGSSLRDYVKPDGELGYFQH 227 Query: 252 AFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQK 289 A+ VYG+ G+ C L C ++RIVQAGRS+F+C Q+ Sbjct: 228 AWRVYGREGQGCPDCPGLPQCAG-VQRIVQAGRSSFFCPRRQE 269 >gi|323466098|gb|ADX69785.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus H10] Length = 276 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 162/288 (56%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTISDAPKD-KHDHVEFIFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P L Q N P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHP------LSQANKIPAEKVIELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus amyloliquefaciens TA208] Length = 276 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 158/291 (54%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYGLHQAD--EP--DDKHVHVVFNMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K SL + KL EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANSLSDGQ------IKKLHTEIKDTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHYVYGKKDEPC-KTCGTMISKIVVGGRGTHFCARCQK 274 >gi|330994261|ref|ZP_08318189.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] gi|329758728|gb|EGG75244.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/274 (39%), Positives = 157/274 (57%), Gaps = 19/274 (6%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 M ++ T++ H LR+ FP + A G+++ +RR KY+LI L G + ++VHLG Sbjct: 1 MHLEGHTISRASTHHTGLRWPFPPGLADALAGRRVDGFARRGKYILITLSGGMVLVVHLG 60 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSG ++ ++ A + H H+ I R DPRRFG +DLV S Sbjct: 61 MSGRVLL--STPAGTVSPALHEHLVIETAEGA-----RCGLVDPRRFGMVDLVPASAVEG 113 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L +GPEP N F+ +L + + S++K LL+Q++VAG+GNIYV EAL+RA + Sbjct: 114 HRLLAGMGPEPLGNRFDGAWLAARGRGRRSSIKALLLDQRVVAGLGNIYVSEALFRAGIH 173 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + +G D +L EI+ VL +AI AGGSSLRDYV DG +GYFQ+A+ V Sbjct: 174 PACAAGDV---SGAEYD---RLATEIRAVLEEAIAAGGSSLRDYVQPDGELGYFQHAWRV 227 Query: 256 YGKTGEPCLSN-----CGQMIRRIVQAGRSTFYC 284 YG+ G+ C CG ++ RI Q+GRSTF+C Sbjct: 228 YGRAGQGCPDCPGPPVCGGVV-RITQSGRSTFFC 260 >gi|118602365|ref|YP_903580.1| formamidopyrimidine-DNA glycosylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166198745|sp|A1AW02|FPG_RUTMC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118567304|gb|ABL02109.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 269 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 163/291 (56%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI +R L+ ++ N V+ + LHR+NLR+ P + +KI + RRAKYL Sbjct: 1 MPELPEVEITKRGLVPLIINQEVSRVILHRENLRWAIPKNLITILANQKIKTIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LI+ E ++I+HLGMSGS + IK P +H H + N T+ + ND Sbjct: 61 LIKFEAG-TLIIHLGMSGSIKVVD------IKTPLLKHEHFELQFNNGTSMR-----LND 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG V S + L +LG EP + FN YL + K N+K+ +++ KIV Sbjct: 109 PRRFG---AVLFSKDGSHKLLDSLGVEPLEAVFNNGYLYQKSRNKRKNIKDFIMDSKIVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLR 237 G+GNIY CE+L+ A ++P RK G YK L Q I+ +L AI AGG++L+ Sbjct: 166 GVGNIYACESLFMASINPQRKA-------GNVSKTRYKILTQCIKDILTQAIKAGGTTLQ 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ +DG+ GYF SVYG + C C I +IVQ RSTFYC CQ Sbjct: 219 DFSQVDGNPGYFTQTLSVYGCENKTC-HFCKSKIIKIVQNQRSTFYCRKCQ 268 >gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens LL3] Length = 278 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 161/291 (55%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 63 FLLFHLD-HYVMVSHLRMEGKYGLHQAD--EP--DDKHVHVVFNMTDGTQLR-----YRD 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V Sbjct: 113 VRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K SL ++G K KL EI+ L +AIDAGGS++R Sbjct: 173 GLGNIYVDEALFRAGIHPETKANSL--SDGQIK----KLHTEIKDTLQEAIDAGGSTVRS 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC CG MI +IV GR T +C CQK Sbjct: 227 YINSQGEIGMFQLRHYVYGKKDEPC-KTCGTMISKIVVGGRGTHFCARCQK 276 >gi|319944878|ref|ZP_08019140.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] gi|319741448|gb|EFV93873.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] Length = 275 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 163/289 (56%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + +G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIQGKKVADVVLRQTRLRWQVNPQLAEILKGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E + +++HLGMSGS I A+ +H+HV + + T + Y+DPR Sbjct: 61 IIGFETGI-LLIHLGMSGSLRIFTCGDARIEHPDKHDHVDMVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E + +P L LGPEP + F+A YL +F + +K AL++ +V G+ Sbjct: 115 RFGAISWHE-GIAEHHPLLEKLGPEPLSDDFSADYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+ + P R N K L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRSGILPHRPA------NKIKKKECAVLVETIKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCVC-CGGLVQKEVLGQRGTFYCPNCQK 275 >gi|15836676|ref|NP_297364.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|15836775|ref|NP_297463.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|28197991|ref|NP_778305.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|28198069|ref|NP_778383.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|71275496|ref|ZP_00651782.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71898603|ref|ZP_00680773.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|170729297|ref|YP_001774730.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|170729377|ref|YP_001774810.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|182680617|ref|YP_001828777.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182680697|ref|YP_001828857.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|54037120|sp|P64155|FPG_XYLFT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040774|sp|P64154|FPG_XYLFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9104844|gb|AAF82884.1|AE003861_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|9104967|gb|AAF82983.1|AE003871_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|28056051|gb|AAO27954.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|28056129|gb|AAO28032.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|71163796|gb|EAO13512.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71731550|gb|EAO33611.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|167964090|gb|ACA11100.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|167964170|gb|ACA11180.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|182630727|gb|ACB91503.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182630807|gb|ACB91583.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|307579076|gb|ADN63045.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] gi|307579162|gb|ADN63131.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 271 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR+D P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ S+I+HLGMSG+ ++ + +P H+HV I L N RV+ +ND Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRLLAPETPLRP-----HDHVDIMLNNR------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV Sbjct: 110 PRRFGCLLWQEDG--QIHPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTFLMDQRIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA +SP L + + +L + ++ +L+ AI+ GG++LRD Sbjct: 168 GVGNIYAAESLFRAGISP------LCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 222 FLSPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|154687040|ref|YP_001422201.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens FZB42] gi|154352891|gb|ABS74970.1| MutM [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 160/291 (54%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 62 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV +T+ T + Y D Sbjct: 63 FLLFHLD-HYVMVSHLRMEGKYGLHQAD--EP--DDKHVHVVFHMTDGTQLR-----YRD 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V Sbjct: 113 VRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P K SL ++G K L EI+ L +AIDAGGS++R Sbjct: 173 GLGNIYVDEALFRARIHPETKANSL--SDGQIK----TLHTEIKDTLQEAIDAGGSTVRS 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC CG MI +IV GR T +C CQK Sbjct: 227 YINSQGEIGMFQLKHYVYGKKDEPC-KTCGTMISKIVVGGRGTHFCARCQK 276 >gi|270157974|ref|ZP_06186631.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|289163759|ref|YP_003453897.1| formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] gi|269989999|gb|EEZ96253.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|288856932|emb|CBJ10746.1| putative formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] Length = 274 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 170/291 (58%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + ++ T++ IC+H LR P + GKKI+ ++RRAKY+ Sbjct: 1 MPELPEVETTKEGIKLHLEGQTISRICVHNPRLRIPVPDRINELCAGKKILAITRRAKYI 60 Query: 61 LIEL-EGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LI+L +G+L ++HLGMSG ++E +S + +H+H+T++L NN + Y D Sbjct: 61 LIQLSQGHL--LIHLGMSGHLRMVELSSIPQ-----KHDHITVALNNNLLLRFY-----D 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG ++ + Y++P L LG EP FN YL + KN +K+ +++ KIV Sbjct: 109 PRRFGLFLYIDKN-PYKHPLLAHLGKEPLSEEFNGHYLFQKGKNKNKPIKSFIMDNKIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ AK+ P T+ L + + KL + I++VL AI GG++L+D Sbjct: 168 GVGNIYATESLFLAKIHPSTPTKILSE------ETQLKLAKHIKEVLQQAIACGGTTLKD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF + VYG+ +PC+ C I ++ GR++ +C CQK Sbjct: 222 FYSFDGKPGYFSISLKVYGRKNQPCM-QCQHPIASVILGGRNSTFCPKCQK 271 >gi|254522802|ref|ZP_05134857.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] gi|219720393|gb|EED38918.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] Length = 270 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 167/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S ++HLGMSGS + P++ H+HV ISL N + +NDPR Sbjct: 61 LLDTAIG-SAVLHLGMSGSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGETHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|329120805|ref|ZP_08249465.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] gi|327459677|gb|EGF06018.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] Length = 272 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N TV+ + + + LR+ P G + + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQTVSAVTIRQPKLRWQIPPALPETLHGLTVRECRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I + K H+HV I+ N T + Y+DPR Sbjct: 61 LIRFDTGV-LLIHLGMSGSLRIWQGNAPAADK---HDHVDIAFANGTLLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + L+ LG EP + F A YL K+ S +K AL++ KIV G+ Sbjct: 112 RFGAI-LWLAGVAEHHDLLKDLGVEPLSDDFTADYLFQALQKRGSPIKTALMDNKIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A ++P R +SL K L ++++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAIAPQRAAKSL------SKTECAALTAAVKQILRRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ + VYG+ +PC S CG I + V R TFYC CQ+ Sbjct: 225 NSEGKSGYFQQEYKVYGRANQPC-SQCGTPIAKTVIGQRGTFYCPVCQR 272 >gi|321312442|ref|YP_004204729.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] gi|320018716|gb|ADV93702.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] Length = 276 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 157/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYGLHQAE--EP--DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDKT------IKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|194363823|ref|YP_002026433.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] gi|238693487|sp|B4SRN0|FPG_STRM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194346627|gb|ACF49750.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] Length = 270 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 166/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S ++HLGMSGS + P++ H+HV ISL N + +NDPR Sbjct: 61 LLDTAAG-SAVLHLGMSGSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGEVHPLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|190572171|ref|YP_001970016.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia K279a] gi|229621835|sp|B2FU49|FPG_STRMK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190010093|emb|CAQ43701.1| putative formamidopyrimidine-dna glycosylase (fapy-dna glycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) [Stenotrophomonas maltophilia K279a] Length = 270 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 167/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S ++HLGMSGS + P++ H+HV ISL N + +NDPR Sbjct: 61 LLDTAIG-SAVLHLGMSGSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGEVHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISRER------YQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|71901945|ref|ZP_00683998.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|71728286|gb|EAO30464.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] Length = 271 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 165/290 (56%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR++ P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWNIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ S+I+HLGMSG+ ++ + +P H+HV I L N RV+ +ND Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRLLAPETPLRP-----HDHVDIMLNNR------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV Sbjct: 110 PRRFGCLLWQEDG--QIHPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTLLMDQRIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA +SP L + + +L + ++ +L+ AI+ GG++LRD Sbjct: 168 GVGNIYAAESLFRAGISP------LCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 222 FLSPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|311069404|ref|YP_003974327.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] gi|310869921|gb|ADP33396.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] Length = 275 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 156/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVRGKTIKSVEIRWPNIIKRPAEPEEFARNLIGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLD-HFVMVSHLRMEGKYGLHQAEDP----DDKHVHVVFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D F YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFHPGEEMRELPLSQLGPEPDDKEFTDAYLKERLMKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + KL +EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANQLSAKK------IKKLHEEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK +PC CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHFVYGKKDKPC-KTCGTMISKIVVGGRGTHFCAKCQK 274 >gi|323495234|ref|ZP_08100316.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] gi|323310494|gb|EGA63676.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] Length = 268 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 114/288 (39%), Positives = 152/288 (52%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV I LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLVGETVAKITFRTPKLRWDIPAELKQ-MEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S IVHLGMSGS + A P K H+HV + LTN + YNDPR Sbjct: 60 LIETDIG-SAIVHLGMSGSLRVLDAEIA-PAK---HDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L T+GPEP + FN Y+T + K +K +++ K+V G+ Sbjct: 110 RFGAWLWTEDG---THAALGTMGPEPLTDEFNPDYITEKAKGKRVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R L L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKLTHKE------WALLVDEIKQVLTTAIKQGGTTLKDFS 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC NCG+ + R+TF+C CQ Sbjct: 221 QADGKPGYFAQELLVYGKAGEPC-PNCGEPLEEQKIGQRNTFFCAECQ 267 >gi|260779657|ref|ZP_05888547.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] gi|260604466|gb|EEX30770.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 157/289 (54%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D PH G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLAGQTVAKLTFRTPKLRWDIPHELKK-MEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S IVHLGMSGS + ++ +H+HV + LTN + YNDPR Sbjct: 60 LIETDVG-SAIVHLGMSGSLRVLDAD----MEPGKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ L +GPEP F+A Y+ + K +K +++ K V G+ Sbjct: 110 RFGAWLWTEDG---EHDALGHMGPEPLTEDFDAQYIADKAKNKRVAVKQFIMDNKAVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R +L T K+ +L++EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRSAGTL-----TAKE-WQRLVKEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK GE C S CG+ I R+TF+C +CQK Sbjct: 221 QADGKPGYFAQELQIYGKAGEACPS-CGEAIEEQKIGQRNTFFCRHCQK 268 >gi|15892961|ref|NP_360675.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] gi|21362545|sp|Q92GT4|FPG_RICCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15620156|gb|AAL03576.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] Length = 273 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 160/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + T I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATETLNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + L LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDL-LEKEFLNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------SGNNLRDDEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|89894087|ref|YP_517574.1| hypothetical protein DSY1341 [Desulfitobacterium hafniense Y51] gi|219668498|ref|YP_002458933.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|122483280|sp|Q24XW2|FPG_DESHY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789434|sp|B8FU83|FPG_DESHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89333535|dbj|BAE83130.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538758|gb|ACL20497.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 273 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L + + +I + + F+ A RG K + RR KY Sbjct: 1 MPELPEVETIRRSLSQHILERRIEEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL LE S I H+ M+G + H +P K H HV + L++ + + D Sbjct: 61 LLFTLEEGWSFIAHMRMTGRMVY-HAQSQEPEK---HTHVVLKLSSGE------IHFTDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T + Q P L LGPEP + F+A L + + +K ALL+Q +VAG Sbjct: 111 RKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+RA ++P R SL K+ + KL I +VL + I A G+S RDY Sbjct: 171 IGNIYADEALFRAGIAPERCANSLT------KEEIEKLYPAICQVLEEGIAANGTSFRDY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G FQ VYG+ GEPC CG + RI AGRST +C CQ Sbjct: 225 QDANGERGDFQKELKVYGRGGEPC-KECGHTLVRIRLAGRSTVFCPCCQ 272 >gi|34499517|ref|NP_903732.1| formamidopyrimidine-DNA glycosylase [Chromobacterium violaceum ATCC 12472] gi|39931210|sp|Q7NQS5|FPG_CHRVO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|34105367|gb|AAQ61722.1| DNA-formamidopyrimidine glycosylase [Chromobacterium violaceum ATCC 12472] Length = 270 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 157/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T+ + +LR+ P S G+K++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLEGRTLLGAVVRNPSLRWPVPPDLSERVAGEKVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E ++++HLGMSGS + P P H + L ++R DPR Sbjct: 61 LLECESG-TLLIHLGMSGSLRV------MPAGAPPQKHDHLDLLLGEQVLRFR----DPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +P L+ LGPEP ++F+ L ++ S +K A+++ +V G+ Sbjct: 110 RFGAV-LWHLGPVEMHPLLQALGPEPLSDAFDGAALHQAIRRRGSPIKLAIMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R L + + +L EI+ VL AIDAGGS+LRD+V Sbjct: 169 GNIYANESLFHAGISPARAACDLSRADCD------RLAAEIKAVLRRAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VY + EPC CG IR+I Q RST+YC CQ Sbjct: 223 DSEGKPGYFQQTYMVYNRQEEPC-RLCGTPIRQIRQGQRSTYYCPLCQ 269 >gi|269958776|ref|YP_003328564.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] gi|269848606|gb|ACZ49250.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] Length = 267 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V D+ +HR++LR F +A +G++I V R A+YL Sbjct: 1 MPELPEAEVISRFFADKAVGRRVEDVTVHRRDLRARIADDFESAVKGREIRSVDRIARYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL +I HLGMSG I HT KP +H+HV + L + N +++NDPR Sbjct: 61 VFELSDGARVIFHLGMSGRMI--HT---KPHVLGKHDHVVMLLDDEFN-----IVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + LV+ Y + + +GP+P F+A YL Q + +K+ L+N IVAG Sbjct: 111 RFGSVLLVDFQ---AYANIASRIGPDPLSAEFSATYLMRQ---SKACVKSTLMNNSIVAG 164 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY----KLIQEIQKVLIDAIDAGGSS 235 IGNIY E L+RA +SP+R D+ Y ++++E + L AIDAGGS+ Sbjct: 165 IGNIYASEILFRAGVSPMRAM----------DDVSYEECEQIVRETKATLRLAIDAGGST 214 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++DY G++G FQ F VY + G+PC + CG+ I +GR+TF+C CQK Sbjct: 215 IKDYTIPTGAVGGFQKHFMVYQRAGKPC-NICGERILSERLSGRTTFFCALCQK 267 >gi|221310849|ref|ZP_03592696.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|221315175|ref|ZP_03596980.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320092|ref|ZP_03601386.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324374|ref|ZP_03605668.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767671|ref|NP_390786.2| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|7531268|sp|O34403|FPG_BACSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|225185299|emb|CAB14868.2| formamidopyrimidine-DNA glycosidase [Bacillus subtilis subsp. subtilis str. 168] Length = 276 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYGLHQAE--EP--DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDKT------IKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 273 >gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] gi|188023541|gb|EDU61581.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] Length = 269 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 120/292 (41%), Positives = 161/292 (55%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTICYAIVRNSRLRWPVSEQIKSLS-DEMILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ N II+HLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELK-NGWIIIHLGMSGSLRI----LLEELPEEKHDHVDLVLKDGKVLR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + D +ETS L LGPEP + FNA YL Q K+ +K L++ K+V Sbjct: 110 RFGAWLWCDDLETSRV-----LSHLGPEPLSDEFNAQYLFEQAGKRKIAIKPWLMDNKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A +SP + T +L L+Q+I+KVL +I+ GG++L+ Sbjct: 165 VGVGNIYANEALFAAGISPEKITHTLTLEQSI------DLVQQIKKVLQRSIEQGGTTLK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYF VYGK GEPCL CG I I Q RSTFYC CQK Sbjct: 219 DFLQSDGKPGYFAQELFVYGKKGEPCLI-CGTPILSIKQGQRSTFYCPQCQK 269 >gi|58698441|ref|ZP_00373350.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] gi|58535033|gb|EAL59123.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] Length = 265 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 103/282 (36%), Positives = 161/282 (57%), Gaps = 18/282 (6%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 +E+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY + +G Sbjct: 1 MEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYTIWNTDG 60 Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 ++++I+HLGMSG I A+ +H+HV ++NT+ +I+NDPRRFG + Sbjct: 61 SMAVIIHLGMSGKLIYAEHDQAQN----KHDHVVFLFSDNTS-----IIFNDPRRFGLVI 111 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 ++ + + G EP + F+ YL K +N+K+AL++ K++ G+GNIY Sbjct: 112 VLNKEQEINF--FDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVGVGNIYAS 169 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY GS Sbjct: 170 ESLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSA 223 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 GYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 264 >gi|58337812|ref|YP_194397.1| formamidopyrimidine-DNA glycosylase [Lactobacillus acidophilus NCFM] gi|227904461|ref|ZP_04022266.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] gi|75507557|sp|Q5FIV8|FPG_LACAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58255129|gb|AAV43366.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus NCFM] gi|227867836|gb|EEJ75257.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] Length = 276 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 156/288 (54%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPTIVATDHDEFLKELPGKKIIGIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTEDAPKD-KHDHVEFVFTDKTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q ++ LGPEP + F+ YL KK+ N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLIITGTERQVTGIKKLGPEPNTSEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ N P + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHPLSIA------NKIPAKKVAGLWENINQTIALAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHVGEEC-PRCGNIFEKIKVSGRGTTFCPHCQ 272 >gi|254498621|ref|ZP_05111340.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] gi|254352161|gb|EET10977.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] Length = 271 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 171/289 (59%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ T+ +I + NLR P++ GKKII V+RRAKY+ Sbjct: 1 MPELPEVETTKQGIKSHLEGQTIHEINVRNFNLRIPVPNNIDELCAGKKIIAVTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI+L +I+HLGMSG II + + +H+H+T++LTN K + ++DP Sbjct: 61 LIQLSRGY-LIIHLGMSGHLRIISGATIPE-----KHDHITLNLTN-----KQALHFSDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG V+ + +Q+ L LGPEP F+ YL + KN +K+ +++ +IV G Sbjct: 110 RRFGLFTYVDEN-PHQHQLLSHLGPEPLSEDFDGSYLYQRAKNKNKPIKSFIMDNEIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A+L P + T+++ + + L++ I+ VL AI++GG++LRD+ Sbjct: 169 VGNIYATESLFLAQLHPNKPTKNVSEEQ------CHLLVKHIKAVLQQAIESGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ +PCL +C ++I +V GRS+ +C CQ Sbjct: 223 YAFDGKPGYFSILLQVYGRKNQPCL-HCQRLIETLVIGGRSSAFCPNCQ 270 >gi|325267966|ref|ZP_08134614.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] gi|324980569|gb|EGC16233.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] Length = 276 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + T++ + + + LR+ P S G+ + RRAKYL Sbjct: 5 MPELPEVETTLRGIAPHITHKTLSRVVIRQPKLRWPIPEDLSETLSGQTVQSCRRRAKYL 64 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE E + +++HLGMSGS I P K H+HV +NT + Y+DPR Sbjct: 65 LIEWETGV-LLIHLGMSGSLRIFREKQPAPDK---HDHVDFIFADNTLLR-----YHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + LR LGPEP F A YL + K +K L++ +V G+ Sbjct: 116 RFGAV-LWLPGVAEHHELLRHLGPEPLSEDFTAEYLHERLRGKKRAVKLMLMDNALVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R +S+ + +L+ ++++L AI GGS+LRD+V Sbjct: 175 GNIYANESLFRAGILPDRAAQSIDLAD------CKRLVLAVKQILQRAIATGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ + VYG+ GE C CG +I + V R TFYCT+CQK Sbjct: 229 DSEGKSGYFQQEYKVYGRAGE-CCKVCGGLIEKSVLGQRGTFYCTHCQK 276 >gi|260770731|ref|ZP_05879661.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] gi|260614312|gb|EEX39501.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] Length = 278 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETVRSLTFRTPKLRWDIPAELKQ-MEGQVITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS + +H+HV ++LTN + YNDPR Sbjct: 60 MIETSVG-SAIVHLGMSGSLRVLDGD----FPPAKHDHVDLTLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L +GPEP + FNA YL H+ KK +K+ +++ KIV G+ Sbjct: 110 RFGAWLWCPAGEHHEV--LGHMGPEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P+R SL + T L+ +I+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAHIHPLRPAHSLSEAEWT------SLVADIKAVLTTAIAQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC CG+ I + R++F+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKKGQPC-PRCGEPIAELKIGQRNSFFCLQCQ 268 >gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437] Length = 274 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 157/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ TV ++ L R P F +G+K+ V RR K Sbjct: 1 MPELPEVETVKRTLQKLITGKTVEEVKVSLPRILQEPPDPQLFGEMLKGRKVTGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + ++ HL M G + +E S P+ +H HV T+ T + Y D Sbjct: 61 FLRIFFD-PWVLVSHLRMEGRYSLE--SAETPVA--KHTHVIFRFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PPLR LGPEP +F K+ +N+K LLNQ+ + Sbjct: 111 VRQFGTMHLWPKGEELNLPPLRKLGPEPLSEAFTLAGFAAGLAKRKTNIKALLLNQEFLC 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R+ +SL D + +L + I+ L+ A++AGGSS+R Sbjct: 171 GLGNIYVDEALFTAGIHPERRVQSL------DSDEVKRLYKSIRSTLVKAVEAGGSSVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G +G FQ VYG+ GEPCL +CG I R V AGR T +C CQ+ Sbjct: 225 YVDGNGEMGMFQLQIQVYGRKGEPCL-HCGHPIERRVVAGRGTHFCPECQQ 274 >gi|327188618|gb|EGE55828.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CNPAF512] Length = 166 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/166 (54%), Positives = 114/166 (68%), Gaps = 1/166 (0%) Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 MD+V + +P R LGPEP N A YL +F K LK+ALL+QK VAG+GNIY Sbjct: 1 MDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALLDQKNVAGLGNIY 60 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 VCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AGGSSLRD++ DG Sbjct: 61 VCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAGGSSLRDHIQTDG 120 Query: 245 SIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 S+GYFQ++FSVY + G+ C + CG + RIVQAGRSTFYC CQK Sbjct: 121 SLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 166 >gi|261250531|ref|ZP_05943106.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] gi|260939100|gb|EEX95087.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] Length = 268 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 156/289 (53%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGETVAKLTFRTPKLRWDIPQELKQ-MEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +I VHLGMSGS + A P K H+HV + LTN + YNDPR Sbjct: 60 LIETDVGCAI-VHLGMSGSLRVLDAEIA-PAK---HDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L +GPEP + FNA Y+ + K +K +++ K+V GI Sbjct: 110 RFGAWLWTEDG---NHTALGIMGPEPLTDEFNADYIAEKAKGKRVAVKQFIMDNKVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R + T K+ + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKI-----TKKEWVL-LVSEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC S CG+ I R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKAGEPCPS-CGEPISEQKIGQRNTFFCGECQK 268 >gi|152976968|ref|YP_001376485.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025720|gb|ABS23490.1| formamidopyrimidine-DNA glycosylase [Bacillus cytotoxicus NVH 391-98] Length = 276 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTMKDVIVTYPKLVKRPDDAELFKELLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G + + C +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKYFL----CKSDDPVDKHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y+ PL LGPEP D YL + K N +K ALL+Q+++ Sbjct: 111 VRKFGTMHLFTKGEEYKEMPLADLGPEPFDPELTVEYLQKKLQKTNRKIKVALLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL +N + K+ L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIYPEREASSLAKNE------IEKIHAATVATLTEAVKRGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQN +VYGK GEPC++ CG I +IV GR T YC +CQ Sbjct: 225 YINSQGEIGSFQNLLNVYGKKGEPCVT-CGTAIEKIVVGGRGTHYCPHCQ 273 >gi|239828007|ref|YP_002950631.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] gi|239808300|gb|ACS25365.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] Length = 274 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVEIIRR L+ + T+ DI + + +P F +G+ I D+ RR Sbjct: 1 MPELPEVEIIRRTLIPLTAGKTIADIQVFWPKI-IKYPADVTEFIETMKGQTIRDIHRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ ++ +I HL M G + + C K H H+ + T + Y Sbjct: 60 KFLKFTLDEHV-LISHLRMEGRYAV----CKKEDPIEPHTHIIFRFIDGTELR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L + PL LGPEP +F A +L + K N +K ALL+Q +V Sbjct: 110 DVRKFGTMHLYRKGEEEARLPLSQLGPEPFSETFTANFLAQRLRKTNRTIKTALLDQTVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV E+L+RA + P R + SL + +L +E+ +L +AI+ GGS++R Sbjct: 170 VGLGNIYVDESLFRAGIHPERISSSLTDEE------VARLHREMVTILQEAIEKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G G FQ VYG+ GEPC CGQ I++ V AGR T YC +CQ Sbjct: 224 SYVNTNGEAGTFQLQLFVYGRKGEPC-QRCGQPIQKTVVAGRGTHYCAFCQ 273 >gi|2293273|gb|AAC00351.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis] Length = 278 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 62 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 63 FLLFHLD-HYVMVSHLRMEGKYGLHQAE--EP--DDKHVHVIFTMTDGTQLR-----YRD 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 113 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 173 GLGNIYVDEALFRAGVHPETKANQLSDKT------IKTLHAEIKNTLQEAIDAGGSTVRS 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 227 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|294789507|ref|ZP_06754743.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] gi|294482587|gb|EFG30278.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N +T + + + LR+ P +G+ + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQKITQVIVRQPKLRWKMPDDLVQILQGQVVRHCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ + +++HLGMSGS I H + + +H+H + T + Y+DPR Sbjct: 61 LIELDAGV-LMIHLGMSGSLRIFH---GRQPEAGKHDHFDAIFADGTLLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + L+ LG EP + F A YL +Q KN +K +++ IV G+ Sbjct: 112 RFGAI-LWLAGVAEHHDLLKNLGVEPLSDEFTASYLLNQLRGKNRAIKLMIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A L P R SL N+ L+ I+ +L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAALLPNRPANSLSLND------CENLVSAIKHILQRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ + VYG+ GE C CG +I + V R TFYC CQK Sbjct: 225 NSDGKSGYFQQEYKVYGRAGETC-KMCGSLIEKTVLGQRGTFYCANCQK 272 >gi|227892836|ref|ZP_04010641.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] gi|227865338|gb|EEJ72759.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] Length = 276 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLVKGKTIKKVILWYPKIVATDHDKFVEELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPDAPKD-KHDHVEFIFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP + F+ Y +K N+KN LL+Q+ VAG+ Sbjct: 112 KFGRMQLILTGTERQITGIGKLGPEPNSSEFSEQYFIDSLKRKKKNIKNTLLDQRTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P++ + +L Q I + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPEEKVKQLRQNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG GE CL CG ++ +I +GR T +C +CQ Sbjct: 226 DANGKTGGYQKMLKVYGHAGEKCL-KCGTILEKIKVSGRGTTFCPHCQ 272 >gi|30250471|ref|NP_842541.1| formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] gi|39931259|sp|Q82S12|FPG_NITEU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30139312|emb|CAD86464.1| Formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 161/289 (55%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RR + + +T I + LR+ A G++I ++RRAKYL Sbjct: 1 MPELPEVEITRRGIDTHLAGRVITQISIRNPVLRWPISAGLIALLPGQRINAIARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L ++I+HLGMSG+ + S PQ H+H + + N + + DP Sbjct: 61 LFACSRG-TLIMHLGMSGNLRVLPESTP-----PQLHDHFDLQVDNGMMLR-----FRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + ++ Q+P L+ LGPEP + F+ +L + +N+++K L+NQ IV G Sbjct: 110 RRFGAILWWDGDIR-QHPLLQKLGPEPLSDDFDGQFLYTKTRGRNASIKEVLMNQHIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL++A +SP+ SL +L+ ++ L+ AI AGGSSLRD+ Sbjct: 169 IGNIYANEALFQAGISPLAAAGSLNTMQ------CERLVDAVKATLLRAIKAGGSSLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +GS GYFQ + VYG+ G+ C CG+++ + Q RSTF+C CQ Sbjct: 223 TDCEGSPGYFQQQYWVYGRAGQSC-RQCGELVSKTRQGQRSTFFCARCQ 270 >gi|229587037|ref|YP_002845538.1| formamidopyrimidine-DNA glycosylase [Rickettsia africae ESF-5] gi|259647149|sp|C3PLF5|FPG_RICAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|228022087|gb|ACP53795.1| Formamidopyrimidine-DNA glycosidase [Rickettsia africae ESF-5] Length = 273 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLTTEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDL-LEKEFFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------SGNDLRDDEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|34581344|ref|ZP_00142824.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] gi|28262729|gb|EAA26233.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] Length = 273 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKHSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDL-LEKEFFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------SGNDLRDDEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|220933505|ref|YP_002512404.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] gi|254789453|sp|B8GUQ6|FPG_THISH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219994815|gb|ACL71417.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] Length = 271 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 162/289 (56%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + VT + + LR+ P + G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIERHVTGRRVTSVIVREPRLRWPVPGDLAERLTGHTLGRVLRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE++ L +++HLGMSGS + + P++ +H+H+ + L + + +DPR Sbjct: 61 LIEVDTGL-LLLHLGMSGSLRV--VTPDAPLR--KHDHIDLCLDSGRCLR-----LHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +E + +P L LGPEP F+A YL K+ +K ++N +V G+ Sbjct: 111 RFGAVLWIEGP-AHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIMNSHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R L + +L++ I++VL +AI GG++LRD+V Sbjct: 170 GNIYASEALFLAGIRPGRAAGRLTRAE------CARLVETIRQVLGEAIAQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYFQ VYG+TG C++ C +++IVQ RST+YC CQ+ Sbjct: 224 REDGSHGYFQQHLRVYGRTGLACMA-CETPVKQIVQGNRSTYYCPACQR 271 >gi|119713349|gb|ABL97413.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB80_02D08] Length = 270 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 164/288 (56%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +++ + ++ ++ +NLR+ F + T G+ + + RRAKYL Sbjct: 1 MPELPEVETTLRAIEK-FQSLKIHEVKIYNRNLRWKISKDFESLTIGQTVESIKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +II+HLGMSGS I + IK H+HV + + R+IYNDPR Sbjct: 60 IFHLSNGQNIILHLGMSGSLRIAKNNENFFIK---HDHVELIFDDE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + K++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHVTSNYKKHKL--IKNLGPEPLSKNFNAESFYAACKTSKTNIKSFLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP+R + L N KL+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLSSISPLRDAKDLDLNECK------KLVASGKKILKKAINVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ E C +NC + I +IV R+TF+C CQ Sbjct: 223 SADGSPGYFKFELNVYGRENESC-NNCCENISKIVINQRATFFCKSCQ 269 >gi|157964829|ref|YP_001499653.1| formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] gi|166988463|sp|A8F2H0|FPG_RICM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157844605|gb|ABV85106.1| Formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] Length = 279 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + V ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIVENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L Q LG EP + YL + + +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEQ-EFFNDLGIEPFSDLLTLEYLKDKLQTRKRPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGSDL------RDDEIENLIKSIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYGK G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGKEGQSCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|268593317|ref|ZP_06127538.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] gi|291311014|gb|EFE51467.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] Length = 269 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 161/293 (54%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAVVRNSRLRWPVSEQIKSLS-DEAVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + + + + Y DPR Sbjct: 60 LIELQTGW-IIVHLGMSGSVRI----LTEELPEEKHDHVDLVMRDGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP ++FN YL KK +K L++ K+ Sbjct: 110 RFGAWLWCDDLENSSV------LAHLGPEPLSDAFNPQYLYELAQKKKVAVKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY EAL+ K+SP + T +L T +L+Q+I+KVL +I+ GG++L Sbjct: 164 VVGVGNIYANEALFATKISPEKITNTLTLAEIT------ELVQQIKKVLQRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D++ DG GYF VYGK GEPC S CG I I Q RSTF+C CQK Sbjct: 218 KDFLQSDGKPGYFAQELFVYGKKGEPC-SMCGTPIESIKQGQRSTFFCPQCQK 269 >gi|296332104|ref|ZP_06874568.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675501|ref|YP_003867173.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150875|gb|EFG91760.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413745|gb|ADM38864.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 276 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 156/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYGLHQAE--EP--DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGLEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDKT------IKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|261363684|ref|ZP_05976567.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] gi|288568235|gb|EFC89795.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] Length = 275 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/294 (36%), Positives = 163/294 (55%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGINPHIQGKKVADVVLRQTKLRWQVNPQLAELLAGQEVLICRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + +++HLGMSGS I A+ +H+HV I + T + Y+DPR Sbjct: 61 IISFATGI-LLIHLGMSGSLRIFTDGDARIDHPDKHDHVDIVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIAEHHPLLEKLGPEPLSDDFSADYLYQKLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAGGSS 235 GNIY E+L++A +SP R P D + K L++ ++ VL AI+ GGS+ Sbjct: 174 GNIYANESLFKAGISPHR-----------PADKIKKKECVVLVETVKAVLQRAIETGGST 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+V+ DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 223 LRDFVNSDGKSGYFQQEYTVYGRYNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|134096049|ref|YP_001101124.1| formamidopyrimidine-DNA glycosylase [Herminiimonas arsenicoxydans] gi|166215628|sp|A4G916|FPG_HERAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133739952|emb|CAL63003.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) [Herminiimonas arsenicoxydans] Length = 273 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 159/293 (54%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V+ + L LR+ FP S G+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPYLEGQVVSGVVLRHTGLRWPFPAALSQTLAGRTIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LI + + ++IVHLGMSG I P+ P +H+H +++ N + D Sbjct: 61 LIHFD-HGTLIVHLGMSGHIRI------LPLGVPPQKHDHFDMTVGNQV------LRLTD 107 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 PRRFG E Q+ LRTLG EP + F A +L Q + S +K LL I Sbjct: 108 PRRFGAVLWHAAEEGAVDQHLLLRTLGVEPLEGLFTAQWLYRQTRSRRSAIKQVLLAGDI 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L++A ++P KT Q + +L Q I+++L AI GGS+L Sbjct: 168 VVGVGNIYASESLFQAGINP--KT----QAHRIGLQRYERLAQAIREILAAAIAQGGSTL 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D++ ++G GYFQ + VY +TGEPC C +R+IVQ RSTFYC CQK Sbjct: 222 KDFIGVNGQSGYFQQNYFVYARTGEPC-RICNAPVRQIVQGQRSTFYCPNCQK 273 >gi|257465199|ref|ZP_05629570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] gi|257450859|gb|EEV24902.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] Length = 274 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 163/289 (56%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTD-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ E I+VHLGMSGS I S +P+ +H+HV + T + YNDPR Sbjct: 60 ILHTEKG-DILVHLGMSGSLGILKESDNQPVG--KHDHVDLITETGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + +LK++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGAWLWAKEALKHEL--LAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P L N T K +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHP-----ELAAQNLTEKQC-ERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG +I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEAC-NDCGSLIETKIIGQRNTYFCPHCQK 271 >gi|157828891|ref|YP_001495133.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933617|ref|YP_001650406.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rickettsia rickettsii str. Iowa] gi|166198743|sp|A8GTA0|FPG_RICRS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044670|sp|B0BUU0|FPG_RICRO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157801372|gb|ABV76625.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908704|gb|ABY73000.1| formamidopyrimidine-DNA glycosylase [Rickettsia rickettsii str. Iowa] Length = 273 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDL-LEKEFFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------SGNDLRDDEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|83643461|ref|YP_431896.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|123535001|sp|Q2SPF3|FPG_HAHCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83631504|gb|ABC27471.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 271 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 163/290 (56%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + ++ LR+ P AA +GK +++V+RRAKYL Sbjct: 1 MPELPEVETTRRGVAPHITGRKILQVNIYEPRLRWPVPMDLPAAAQGKTVLNVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L G+ ++ HLGMSG+ I A +H+HV I L + + YNDPR Sbjct: 61 LINL-GDDELLFHLGMSGNLRI----VAPETPRMKHDHVDILLEGDITLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + ++P L+ LGPEP + F+ L + ++ S +K L++Q IV G+ Sbjct: 111 RFGCLLLLNPPTQ-EHPLLKHLGPEPLSDQFSGELLYKRSRQRKSPVKTFLMDQAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R + Y+++ E ++KVL DAI+ GG++LRD+ Sbjct: 170 GNIYANEALFLAGIRPTRAAGEVSLKR-------YQVLAEAVRKVLSDAINMGGATLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ YG+ G+PC + C ++ I R++ +C CQ+ Sbjct: 223 VGGDGKPGYFQQTLRAYGRGGQPC-TVCQTELKEIKLGQRTSVFCPSCQR 271 >gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] gi|122266079|sp|Q03GC2|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] Length = 275 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ VT++ + + F+ GKKI++V RR KYL Sbjct: 1 MPELPEVETVRRGLAALVEGKIVTNVVVRYSKMVSPKAEIFAEELEGKKILNVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ G+ +++ HL M G + + + + +H+HV L + + + YND R Sbjct: 61 LIDFSGDYTMVSHLRMEGKYSV----VDRREEYGKHDHVIFELDDGKDLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV T + Q L+T+GPEP + YLTHQ + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQSMIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P + I N T ++I L + I + L AI+A G+++ Y+ Sbjct: 172 GNIYADEVLWLSKIHPQQ-----ISNTLTDEEIAI-LRESIFEELQLAIEAKGTTVFSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG G FQN VY + G PC CG I RI A R T +C +CQ Sbjct: 226 NADGHAGSFQNQLHVYHRQGLPC-QRCGTPIERIKVAQRGTHFCPHCQ 272 >gi|240950195|ref|ZP_04754482.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] gi|240295282|gb|EER46068.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] Length = 274 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 162/289 (56%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTE-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ E I+VHLGMSGS I S +P+ +H+HV + T + YNDPR Sbjct: 60 ILHTEKG-DILVHLGMSGSLGILKESDNQPVG--KHDHVDLITETGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + +LK++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGAWLWAKEALKHEL--LAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P L N T K +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHP-----ELAAQNLTEKQC-ERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEAC-NDCGSFIETKIIGQRNTYFCPHCQK 271 >gi|166709959|ref|ZP_02241166.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 271 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 158/291 (54%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQNG------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L+ S + L LGPEP +F YL H + + +K L++Q +V Sbjct: 110 PRRFGC--LLWQSDTQAHELLAALGPEPLSEAFTGDYLHALAHGRRAAVKTFLMDQAVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L RA +SP+R+ D +L ++ +L AI GG++LRD Sbjct: 168 GVGNIYAAESLHRAGISPLREA------GKVSLDRYRRLAAAVKDILSYAIRRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 222 FISPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|254670484|emb|CBA06192.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha153] Length = 275 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|255067093|ref|ZP_05318948.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] gi|255048689|gb|EET44153.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] Length = 275 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGISPHIQGKKVADVVLRQTKLRWQVNPQLAEILAGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + +++HLGMSGS I A+ +H+H I + T + Y+DPR Sbjct: 61 IIGFATGI-LLIHLGMSGSLRIFTDGDARIDHPDKHDHADIVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E + +P L LGPEP + F+ YL +F + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIAEHHPLLEKLGPEPLSDDFSVEYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++ +SP R + K L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKSGISPHRPA------DKVKKKECAVLVETIKSVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|194098867|ref|YP_002001931.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291043590|ref|ZP_06569306.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|293398902|ref|ZP_06643067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|193934157|gb|ACF29981.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291012053|gb|EFE04042.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|291610316|gb|EFF39426.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|317164441|gb|ADV07982.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 296 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 22 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 82 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 135 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 136 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 195 GNIYANESLFRAGISPHRPANRL------KKKECAVLVETVKAVLQRAIETGGSTLRDFV 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 249 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 296 >gi|291485341|dbj|BAI86416.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. natto BEST195] Length = 278 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 3 VPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 62 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P + +H HV ++T+ T + Y D Sbjct: 63 FLLFHLD-HYVMVSHLRMEGKYGLHQAE--EP--DDKHVHVIFTMTDGTQLR-----YRD 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 113 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L I+ L +AIDAGGS++R Sbjct: 173 GLGNIYVDEALFRAGVHPETKANQLSDKT------IKTLHAGIKNTLQEAIDAGGSTVRS 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 227 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|59801038|ref|YP_207750.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|239999153|ref|ZP_04719077.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|240013939|ref|ZP_04720852.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI18] gi|240080500|ref|ZP_04725043.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|240113132|ref|ZP_04727622.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|240115888|ref|ZP_04729950.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|240118186|ref|ZP_04732248.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|240121508|ref|ZP_04734470.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID24-1] gi|240123734|ref|ZP_04736690.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|240125925|ref|ZP_04738811.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|240128437|ref|ZP_04741098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|254493927|ref|ZP_05107098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|260440297|ref|ZP_05794113.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|268594986|ref|ZP_06129153.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268596634|ref|ZP_06130801.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268599214|ref|ZP_06133381.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268601561|ref|ZP_06135728.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268603900|ref|ZP_06138067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268682363|ref|ZP_06149225.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268684521|ref|ZP_06151383.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268686831|ref|ZP_06153693.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|75507393|sp|Q5F8Z9|FPG_NEIG1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59717933|gb|AAW89338.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|226512967|gb|EEH62312.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|268548375|gb|EEZ43793.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268550422|gb|EEZ45441.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268583345|gb|EEZ48021.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268585692|gb|EEZ50368.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268588031|gb|EEZ52707.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268622647|gb|EEZ55047.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268624805|gb|EEZ57205.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268627115|gb|EEZ59515.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] Length = 275 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECAVLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|325134462|gb|EGC57107.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13399] Length = 280 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|331701575|ref|YP_004398534.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] gi|329128918|gb|AEB73471.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] Length = 280 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++K T+ + L+ K + P+ F A RGK I + RR KY Sbjct: 1 MPELPEVETVRRGLTQLVKGSTIQSVDVLYAKMINLP-PNDFKKALRGKTIEKIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI L NL+I+ HL M G + +E P+ +H H+ LT+ + YND Sbjct: 60 LLIRLSDNLTIVSHLRMEGKYDVEPEDA--PVG--KHTHIIFHLTDGRQLR-----YNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+LV+T + Q L+T+GPEP ++ Y+ F K +K LL+Q +AG Sbjct: 111 RKFGRMNLVDTGTEMQVAGLKTIGPEPTEDDLTVDYMQKIFGKSRKVIKPFLLDQSNIAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E LW +K++P + +L K++ +I E+ K AI G+++ Y Sbjct: 171 LGNIYADEVLWLSKINPQQPANTLTLRQ--IKELRKNIIAELAK----AIAGHGTTVHSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN +VYG+ GEPC S CG I +I A R T +C CQ Sbjct: 225 STAYGEAGSFQNQLNVYGREGEPC-SRCGTKIVKIKLAQRGTHFCPKCQ 272 >gi|238650997|ref|YP_002916853.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] gi|259647150|sp|C4K2K4|FPG_RICPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238625095|gb|ACR47801.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] Length = 273 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGM+G F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMNGRFTLQSAN----YKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDL-LEKEFFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------SGNDLRDDEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|261392423|emb|CAX49968.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis 8013] Length = 275 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|15677162|ref|NP_274315.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|9911065|sp|P55044|FPG_NEIMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|7226536|gb|AAF41671.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|316984086|gb|EFV63064.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] gi|325140479|gb|EGC63000.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis CU385] gi|325200078|gb|ADY95533.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] Length = 275 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|300313204|ref|YP_003777296.1| formamidopyrimidine-DNA glycosylase [Herbaspirillum seropedicae SmR1] gi|300075989|gb|ADJ65388.1| formamidopyrimidine-DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 162/293 (55%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ TV+ + + LR+ FP A RG+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 LI + + ++IVHLGMSG H P PQ H+H + + + DP Sbjct: 61 LIHFD-HGTLIVHLGMSG-----HLRILPPGIAPQKHDHFDLEVGGQV------MRMTDP 108 Query: 120 RRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RRFG + DL + +++ ++ LR+LG EP + F A L Q +++ +K LL I Sbjct: 109 RRFGAILWHDLADGAVE-EHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDI 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L++A++ P ++ P+ +L Q I++ L AI+ GGSSL Sbjct: 168 VVGVGNIYASESLFKARIHP----KTAAGKISLPR--YERLAQAIRETLAAAIEQGGSSL 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ ++G GYFQ + VY +TGE C C IR+I Q RSTFYC CQK Sbjct: 222 RDFIAVNGQSGYFQQNYFVYNRTGEAC-RICATPIRQIKQGQRSTFYCVSCQK 273 >gi|126664537|ref|ZP_01735521.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] gi|126630863|gb|EBA01477.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] Length = 270 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 161/290 (55%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ TV + + LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQTVRSVGVRNGRLRWPVPEDLAVRLEGEVIRSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L+ S+IVHLGMSGS II S A H+HV ++L + R+ YNDP Sbjct: 61 FLNLDSG-SVIVHLGMSGSLRIITDDSAAL-----THDHVELTLHSGV-----RLRYNDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + +S +P + +LGPEP FN YL + K++ +K+ +++ +V G Sbjct: 110 RRFGCW--LWSSNPSTHPLIASLGPEPLAPEFNGAYLFRRSRGKSTAVKSFIMDGHVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R+ + + ++L++ IQ+ L AI GG++LRD+ Sbjct: 168 VGNIYANEALFGAGIHPRRQAGRISLSR------YHRLVEVIQETLTAAILMGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ DG GYF + VYG+ G+PC C +R I R+T YCT CQ+ Sbjct: 222 VNSDGQPGYFAQSLLVYGRGGQPC-PECQAKLREIRMNQRATVYCTRCQR 270 >gi|254805097|ref|YP_003083318.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] gi|254668639|emb|CBA06272.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] Length = 275 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 159/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC+ CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCSNCQK 275 >gi|46199756|ref|YP_005423.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55981775|ref|YP_145072.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB8] gi|7531119|sp|O50606|FPG_THET8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81405496|sp|Q72HN2|FPG_THET2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2897751|dbj|BAA24892.1| mutM [Thermus thermophilus] gi|46197383|gb|AAS81796.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55773188|dbj|BAD71629.1| MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) [Thermus thermophilus HB8] Length = 267 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+L Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQV-VHRDPARY----RNTALAEGRRILEVDRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG + ++ HLGM+G F +E T H + L T + ++DPR Sbjct: 56 LFALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLEGRT------LYFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V + P L LGPEP +F + LK LL+Q++ AG+ Sbjct: 101 RFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Sbjct: 161 GNIYADEALFRARLSPFRPARSLTEEEAR------RLYRALREVLAEAVELGGSTLSDQS 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 263 >gi|239947088|ref|ZP_04698841.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921364|gb|EER21388.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] Length = 273 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 160/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSSLLATEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQSAN----YKTQKHDHVIFDLNNCE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL ++ + +KN +++ KI+ G+ Sbjct: 112 RFGMVYSFKTNF-LEKEFFNDLGIEPLSDSLTLEYLKNKLKIRKIPIKNLIMDNKIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + N D + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDK------LGNDLNDDEIESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFIQQLTVYGREGQNCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|291614819|ref|YP_003524976.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] gi|291584931|gb|ADE12589.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] Length = 271 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 157/291 (53%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + D+ + +LR+ P + RG + D+ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHLKQRRIVDVVIRNPDLRWPIPGNLPELLRGHIVQDLQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE--HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LI G+ ++I+HLGMSGS I+ TS K H+H + + N + D Sbjct: 61 LISF-GHGTLILHLGMSGSLRIQPLDTSAEK------HDHFDLVMDNGQLLR-----LRD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + L Q+P L +LGPEP F+A L K+ + +K +++ +V Sbjct: 109 PRRFGAV-LWHQGDVAQHPLLASLGPEPLLAGFDADTLYAATRKRKAAIKLVIMDNHVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA + P + K+ +L I++VL AI GGSSLRD Sbjct: 168 GVGNIYANEALFRAGIRP------QLAAGKISKERCARLTVTIKEVLRAAIRKGGSSLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G GYFQ + YG+TGEPC C IR+I Q RSTFYC CQK Sbjct: 222 YVDSNGKQGYFQQHYFAYGRTGEPC-RVCATPIRQIRQGQRSTFYCPRCQK 271 >gi|67906503|gb|AAY82610.1| predicted formamidopyrimidine-DNA glycosylase [uncultured bacterium MedeBAC35C06] Length = 269 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 169/290 (58%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE L V K + DI + +NLR+ F KKII ++RRAKY Sbjct: 1 MPELPEVETTMSALQPFVEKKIVSVDI--NNRNLRWKIEKDFEKNISNKKIISIARRAKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L II+HLGMSG+ I+ K +H+H+ + L K ++IYND Sbjct: 59 IIFNLSDGF-IILHLGMSGNIRIQD---LKSNTYKKHDHIILYL------KDKKIIYNDI 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + + + ++ LGPEP + FN YL + K +N+KN ++NQK+V G Sbjct: 109 RRFGSIHFTDNA--KDHFLIKNLGPEPLLSDFNKKYLFNISRKSKTNIKNFIMNQKVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A+++P ++I N+ + +D +L++ I+ +L AI+ GG++L+D+ Sbjct: 167 VGNIYASEALFEARINP-----NMITNSISEED-CKRLVKSIKNILKIAINMGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DGS GYF+ VYG+ + C S C +I++IV RSTFYC CQK Sbjct: 221 YSVDGSEGYFKIKLKVYGRENKKCKS-CKGVIKKIVLNQRSTFYCLDCQK 269 >gi|268319915|ref|YP_003293571.1| hypothetical protein FI9785_1445 [Lactobacillus johnsonii FI9785] gi|262398290|emb|CAX67304.1| mutM [Lactobacillus johnsonii FI9785] Length = 276 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T++ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTISKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + H K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKY---HLVTPDQPKG-KHEHVEFVFTDGTALR-----YADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S+ P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKSI------PADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|289666306|ref|ZP_06487887.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 271 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 158/291 (54%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----SHDHVDISLQNG------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L+ S + L LGPEP ++F YL + + + +K L++Q +V Sbjct: 110 PRRFGC--LLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L RA +SP+R+ D +L ++ +L AI GG++LRD Sbjct: 168 GVGNIYAAESLHRAGISPLREA------GKVSLDRYRRLADAVKDILAYAIQRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ +VYG+ GEPC CG++++ R+T +C CQ+ Sbjct: 222 FISPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWCGSCQR 271 >gi|325201993|gb|ADY97447.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240149] Length = 275 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDERIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|253997189|ref|YP_003049253.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] gi|253983868|gb|ACT48726.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] Length = 271 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 161/294 (54%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ +++ TV + + +LR+ P + + +G+ + ++RRAKY+ Sbjct: 1 MPELPEVETTRLGLLSLVEQ-TVAQVVIRNPSLRWPIPDNLADLLQGQTLRALTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++HLGMSG + AK +H+H + T+ + DPR Sbjct: 60 LAHFDHGV-LLLHLGMSGRICL----LAKNETAQKHDHFDLVFTDGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+ L LGPEP D++F YL + + +K +++ +V G+ Sbjct: 110 RFGAV-LWAGEHYTQHKLLSVLGPEPLDDAFTGAYLQQHIRTRTAAIKTTIMDGHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL-----YKLIQEIQKVLIDAIDAGGSS 235 GNIY E+L+RA+++P TP + L L+ EI+ L DA+ AGGSS Sbjct: 169 GNIYASESLFRARINP-----------ATPANKLNLRQCETLVAEIKATLSDALKAGGSS 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ DG+ GYFQ + VYG+TGEPC CG+ I I Q RSTFYC CQK Sbjct: 218 LRDFFGTDGNPGYFQQQYFVYGRTGEPC-RVCGKHILNIKQGQRSTFYCGVCQK 270 >gi|285019922|ref|YP_003377633.1| formamidopyrimidine-DNA glycosylase [Xanthomonas albilineans GPE PC73] gi|283475140|emb|CBA17639.1| probable formamidopyrimidine-dna glycosylase protein [Xanthomonas albilineans] Length = 270 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 162/292 (55%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + L R +LR+ P + G++I + RRAKYL Sbjct: 1 MPELPEVETTRRGLEPHLAGRRIHGVILRRPDLRWPIPPEVTQQLPGQRIAGIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI-YN 117 L+E S ++HLGMSGS + P P H+HV +SL + RV+ +N Sbjct: 61 LLETAAG-SALLHLGMSGSLRV------LPGDTPPRTHDHVDMSLEDG------RVLRFN 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG L+ + +P L LGPEP ++F+ YL + + +K L++Q+IV Sbjct: 108 DPRRFGC--LLWQAPGTLHPLLAELGPEPLSDAFDGDYLFQLSRGRKAPVKTFLMDQRIV 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L++A +SP+R + + +L + + +L AI GG++LR Sbjct: 166 VGVGNIYAAESLFQAGISPLRAAGEVSRAR------YARLAEATKAILGYAIQRGGTTLR 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG+ GYF+ SVYG+ GE C CG+++R R++ +C +CQ+ Sbjct: 220 DFISPDGAPGYFEQELSVYGREGEAC-KRCGRLLRHASIGQRASVWCGHCQR 270 >gi|42519527|ref|NP_965457.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] gi|81703799|sp|Q74IB5|FPG_LACJO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41583816|gb|AAS09423.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] Length = 276 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPKG----KHEHVEFVFTDGTALR-----YADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S+ P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKSI------PADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|238918039|ref|YP_002931553.1| formamidopyrimidine-DNA glycosylase, [Edwardsiella ictaluri 93-146] gi|259647333|sp|C5B9D8|FPG_EDWI9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238867608|gb|ACR67319.1| formamidopyrimidine-DNA glycosylase, putative [Edwardsiella ictaluri 93-146] Length = 269 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 163/294 (55%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETL-LTLRDRPILSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYND 118 L+EL EG I++HLGMSGS I + PQ H+H+ + LT+ + Y D Sbjct: 60 LLELPEG--WIVIHLGMSGSVRI-----LPALTPPQKHDHIDLLLTDGMMLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D + T+ + LGPEP +F+A YL + + + +K L++ Sbjct: 108 PRRFGAWLWYDSLATASVLAH-----LGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNT 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A++ P R SL + + L+Q I+ VL +ID GG++ Sbjct: 163 LVVGVGNIYASESLFSAQIHPDRLAGSLSADEA------HLLVQTIKAVLQRSIDQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG+ GE CL+ CG I+R R+TFYC +CQ+ Sbjct: 217 LRDFLQADGKPGYFAQQLQVYGRAGEACLT-CGTTIKRSKHGQRTTFYCPHCQR 269 >gi|294671315|ref|ZP_06736166.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306947|gb|EFE48190.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 273 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ + + LR P G+ ++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHISGKTIVRTTVRQAKLRHPVPPDLDDTLNGETVLRCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L + +++HLGMSGS + TS P +H+HV I ++ T + Y+DPR Sbjct: 61 LVHLPQGI-LLIHLGMSGSLRL-FTSGNAPDAG-KHDHVEIEFSDGTLLR-----YHDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L+ L PEP N F A YL + K+ S +K+ L++ K V G+ Sbjct: 113 RFGIVSWYPGP-EETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNKTVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A ++P R + + L+ I++ L AI+ GGS+LRD+V Sbjct: 172 GNIYANESLFAAGIAPNRPAMQISRKEAA------ALVHHIRETLRRAIEKGGSTLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VYG+ G+PCL CG I + V R TFYC CQ Sbjct: 226 DSEGKSGYFQQEYKVYGRQGQPCL-QCGGGIEKTVIGQRGTFYCPNCQ 272 >gi|91205062|ref|YP_537417.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157827633|ref|YP_001496697.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] gi|123388145|sp|Q1RJY6|FPG_RICBR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198741|sp|A8GXR0|FPG_RICB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91068606|gb|ABE04328.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157802937|gb|ABV79660.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] Length = 273 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + + R NLR+ + II+V RRAKYL Sbjct: 1 MPELPEVETLKNSLESKLIGLVIKKVEFKRDNLRYKLSADLADQIVNTNIINVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ N S+IVHLGMSG F ++ + + +H+HV +L+NN ++I+ND R Sbjct: 61 IIDFNNNHSLIVHLGMSGRFTLQPNN----YEVKKHDHVVFNLSNNE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L + L EP +SF YL + K +KN L++ +IV G+ Sbjct: 112 RFGMIYSFHTEL-LEKDFFANLALEPLSDSFELQYLKSKLMNKKVPIKNLLMDNRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L AK+ P + + L D + LI ++ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLAKIHPDKFGKDL------NDDEIKNLIAAVKNVLSKAIIAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D GYF VY + G+ CLS C I + +GRSTFYC CQK Sbjct: 225 NGDNKPGYFTQQLMVYARDGQECLS-CSSSIIKTKHSGRSTFYCKSCQK 272 >gi|295425308|ref|ZP_06818011.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] gi|295065084|gb|EFG55989.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] Length = 276 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKI+D+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIKKVTLWYPKIVATDHQQFIDELPGKKILDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPDAPKD-KHDHVQFEFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP F Y + +K+ N+KN LL+Q IVAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSKEFTEAYFIAKLKRKHKNIKNTLLDQSIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ + P+D + +L +I + AI G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSIASKI------PEDKVKELHTKINHEISIAIKMRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ VYG GE C NCG +I GR T +C +CQ Sbjct: 226 DANGNAGGFQKMLQVYGHVGEAC-PNCGNKFEKIKVNGRGTTFCPHCQ 272 >gi|319638532|ref|ZP_07993294.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] gi|317400281|gb|EFV80940.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] Length = 275 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 163/290 (56%), Gaps = 16/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G+K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIEPHIDGKKIAKVTIRQFKLRWPVHPDLAQILAGRKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 +I E + +++HLGMSGS I T+ + I P +H+H+ + T + Y+DP Sbjct: 61 IITFETGI-LLIHLGMSGSLRI-FTADDERIATPDKHDHLDFVFDDGTVLR-----YHDP 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E + +P L LGPEP +F+A YL + + +K AL++ +V G Sbjct: 114 RKFGAVLWYE-GIAEHHPLLEKLGPEPLSEAFDANYLYQKLKTQKRAVKLALMDNAVVVG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L++A +SP+R L + L++ I+ +L+ AI+ GGS+LRD+ Sbjct: 173 VGNIYANESLFKAGISPLRPANKLTKKECA------LLVETIKAILLRAIETGGSTLRDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 227 VNSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|284799871|ref|ZP_05985082.2| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] gi|284796762|gb|EFC52109.1| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] Length = 276 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIASHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGS---FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +I E + +++HLGMSGS F + A P K H+H+ + + T + Y+ Sbjct: 62 IITFETGI-LLIHLGMSGSMRIFTADDERIAMPDK---HDHLDFAFDDGTVLR-----YH 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPR+FG + E + +P L LGPEP + F+A YL + + +K AL++ +V Sbjct: 113 DPRKFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LR Sbjct: 172 VGVGNIYANESLFKAGISPLRPANKLTKKECA------LLVENVKAVLQRAIETGGSTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 226 DFVNSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|148244469|ref|YP_001219163.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] gi|166198755|sp|A5CX90|FPG_VESOH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146326296|dbj|BAF61439.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] Length = 269 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 113/288 (39%), Positives = 160/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E I+R L ++ N V LHR+NLR+ P H S + I + RR KYL Sbjct: 1 MPELPEIETIKRGLTSLIINQKVNKAILHRENLRWVIPKHLSTTLTNQLISTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I+HLGMSGS + +T+ P+ +H H + L N T+ + DPR Sbjct: 61 LIKFKVG-TLIIHLGMSGSIKVVNTNT--PL--LKHEHFELQLKNGTSMR-----LKDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V S + L +LG EP SF YL + K N+K +++ KIV G+ Sbjct: 111 RFG---AVLFSKDGSHKLLDSLGVEPLKTSFYDGYLYQKSRNKQQNIKAFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A ++P K S+ K L Q I+ +L AI+AGG++L+D+V Sbjct: 168 GNIYACESLFMAGINPKLKAGSI------SKTRYNVLTQCIKNILTQAIEAGGTTLQDFV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G+ GYF SVYG + C C +I + VQ RSTFYC CQ Sbjct: 222 QVNGNPGYFTQNLSVYGCKNKKCY-RCKGIIIKFVQNQRSTFYCKKCQ 268 >gi|167629831|ref|YP_001680330.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] gi|238687886|sp|B0TER7|FPG_HELMI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167592571|gb|ABZ84319.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] Length = 277 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 14/290 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + +T+ + L + F P F+ A RG++II++ RR KY Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEKVELRLPKIAFALPGTLFTDALRGRRIIELGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G+ ++++HL M+G +I + H H L + + + Y D Sbjct: 61 LLLHLDGDETLVIHLRMTGR-LIHLRPEEREEPEAAHTHAVFFLDDGSLLR-----YTDV 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L+ + P LGPEP F+ + + K+ + LK LL+Q +AG Sbjct: 115 RQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQSFLAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+L P R SL +L I+ VL + IDA G+S RDY Sbjct: 175 LGNIYADEALARARLHPDRTADSLDDEESR------RLYDCIRTVLQEGIDAKGTSFRDY 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G FQ VYG+ G PC CG I R +AGRST +C CQK Sbjct: 229 VDGEGRKGEFQEKLWVYGRGGNPC-RRCGGEILREKRAGRSTHFCPRCQK 277 >gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] Length = 274 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 157/290 (54%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++K + + + + K L + P F G ++IDV RR KY Sbjct: 1 MPELPEVETVVRGLKELIKGVKINKVIIRETKLLVYPDPDTFIDLVEGSRVIDVLRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI+L+ N ++ HL M+G ++ + K +H H L + + + +N+ Sbjct: 61 ILIKLDNNRFLVFHLKMTGQLVVYERNN----KYDKHTHFVFELEDGRDLR-----FNNM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV + L LGPEP + F ++ N+K LLNQK +AG Sbjct: 112 RKFGRVYLVTKGEFDKAGSLADLGPEPLSDEFTVDEFADIIKRRKGNIKGLLLNQKFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A +SP RK SL + + +L I+KVL I GG+S++DY Sbjct: 172 LGNIYADEALFEAGISPERKADSLDDSE------IERLYHAIRKVLKMGIKYGGTSMKDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G IG FQN VY KTGE C+ NCG I++ V GRS+ YC CQK Sbjct: 226 VNARGRIGEFQNKLKVYRKTGEECV-NCGHEIQKKVIRGRSSHYCPGCQK 274 >gi|261856609|ref|YP_003263892.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] gi|261837078|gb|ACX96845.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] Length = 281 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T + LR+ +A G+ II VSRR+KYL Sbjct: 1 MPELPEVETTRRGLEPHLLGQRITSATVFDSRLRWRVRDDLAAWLEGRLIIAVSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E +++HLGMSGS I I +H+HV I + ++ N + ++DPR Sbjct: 61 LLHFENGERLLIHLGMSGSLRI----VTPDIPRRKHDHVEICINSSKNLR-----FHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + + L+ LGPEP ++F+ YL Q HK+ +K L+N IV G+ Sbjct: 112 RFGA--LLTDHEQAPHIRLQNLGPEPLSDAFDTHYLGTQLHKRKQAIKPCLMNAAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ + + P +L N + L+ I+ VL AI+ GG++LRD+V Sbjct: 170 GNIYANEVLFLSGIHPATPAHTLDHNQ------INLLVTAIKNVLARAIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VY + +PC C I + VQA R+T+YC CQ Sbjct: 224 REDGQPGYFKQTLNVYDRADQPC-RVCSTPIVKTVQAQRATYYCPVCQ 270 >gi|82701716|ref|YP_411282.1| formamidopyrimidine-DNA glycosylase [Nitrosospira multiformis ATCC 25196] gi|123544992|sp|Q2YBI1|FPG_NITMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|82409781|gb|ABB73890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosospira multiformis ATCC 25196] Length = 272 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 160/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR + ++ + + + NLR+ P G +I V+RR KYL Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRWPVPE-LERTLCGLEIRTVTRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ G ++I+HLGMSGS + + A I +H+H+ + L K + + DPR Sbjct: 60 LLDC-GAGTLILHLGMSGSLRL--LALAANIAPQKHDHIDLLLD-----KGMVLRFRDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T +P L LGPEP +F+ L + +++++K L+N +IV G+ Sbjct: 112 RFGAV-LWTTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L Q I++ L AI+AGGSSLRD+V Sbjct: 171 GNIYANEALFLAGIDPANAAGRIGARR------CAGLAQAIKETLGRAIEAGGSSLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VY +TG+PC CG I +I Q RS+FYC CQK Sbjct: 225 GSDGNPGYFQQQYWVYSRTGQPC-RKCGTNIEQIRQGQRSSFYCPRCQK 272 >gi|218708249|ref|YP_002415870.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] gi|254789455|sp|B7VHK6|FPG_VIBSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218321268|emb|CAV17218.1| Formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] Length = 269 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 159/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQELKR-LEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + LTN + YNDPR Sbjct: 60 LIETDTG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGAW--LWSAPDEIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + T ++ L L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKV-----TKQEWLL-LTKEIKQVLATAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCAELIQELKIGQRNTFYCSSCQ 268 >gi|74316401|ref|YP_314141.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Thiobacillus denitrificans ATCC 25259] gi|90101322|sp|Q3SLR9|FPG_THIDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74055896|gb|AAZ96336.1| formamidopyrimidine-DNA glycolase [Thiobacillus denitrificans ATCC 25259] Length = 270 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + + LR+ P RG + ++RR KYL Sbjct: 1 MPELPEVETTRAGLSPRLQGRVLTRVIVREPRLRWPIPPDLDTQLRGLTLHGLARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G ++ +VHLGMSGS + T A+P +H+HV + T + DPR Sbjct: 61 LFDF-GAVTQLVHLGMSGSLRL--TEPAEPAA--RHDHVDWRFDDGTILR-----LRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E + + P L LGPEP +F+A YL Q ++ + +K +++ +V G+ Sbjct: 111 RFGAVLLTENAPGH--PLLAGLGPEPLSTAFDAAYLHTQCQRRKTAIKPLIMDAHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + + +L I++VL AI AGGSSLRDYV Sbjct: 169 GNIYASESLFHAGIRPG------VAAHRLSRAACARLADAIKQVLTAAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ VY + PC C IRRIVQA R++FYC CQ+ Sbjct: 223 QSSGELGYFQLQTRVYDREDAPC-RRCATPIRRIVQAQRASFYCPTCQR 270 >gi|269137427|ref|YP_003294127.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|267983087|gb|ACY82916.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|304557501|gb|ADM40165.1| Formamidopyrimidine-DNA glycosylase [Edwardsiella tarda FL6-60] Length = 269 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 162/296 (54%), Gaps = 34/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLEGKTLSHLTVRQPRLRWPVSETL-LTLRDRPILSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L+ L EG I++HLGMSGS I P + P +H+HV + LT+ + Y Sbjct: 60 LLALPEG--WIVIHLGMSGSVRI------LPAQTPPQKHDHVDLLLTDGMMLR-----YT 106 Query: 118 DPRRFG----FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG + DL S+ L LGPEP +F+A YL + + + +K L++ Sbjct: 107 DPRRFGAWLWYDDLATASV------LAHLGPEPLSEAFSAEYLLERARGRRTAVKPWLMD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +V G+GNIY E+L+ A++ P R SL + + L+Q I+ VL +ID GG Sbjct: 161 NTLVVGVGNIYASESLFSAQIHPDRLAGSLSADEAS------LLVQTIKAVLQRSIDQGG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD++ DG GYF VYG+ GE CL+ CG I+ R+TFYC +CQ+ Sbjct: 215 TTLRDFLQADGKPGYFAQQLQVYGRAGEACLT-CGTTIKSSKHGQRTTFYCPHCQR 269 >gi|121635008|ref|YP_975253.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|120866714|emb|CAM10466.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|325138277|gb|EGC60846.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis ES14902] gi|325142419|gb|EGC64823.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 961-5945] Length = 280 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|4511987|gb|AAD21547.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 252 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/267 (39%), Positives = 148/267 (55%), Gaps = 19/267 (7%) Query: 23 VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 + D+ + R +LR P G II +SRRAKY +I + + ++I HLGMSG + I Sbjct: 5 IIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYGIIVNDRDDALIFHLGMSGRWKI 64 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 P +H+H + NN + V DPRRFG +DLV+ + ++ R + Sbjct: 65 ------NPENFEKHDHFVLQTKNN-----FIVSLYDPRRFGSLDLVKKNQLLEWSYFRNI 113 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GPEP +FN YL + ++ ++ LL+QK+VAGIGNIY CEAL +AK+ P R +++ Sbjct: 114 GPEPLTGNFNPEYLQKKLFSSSAPIREILLDQKVVAGIGNIYACEALHQAKIHPQRPSKN 173 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 L D + L+ I+ +L AI GGS+L+DY +G +GYF F VYGK GE Sbjct: 174 L------NFDEITSLVFSIKNILQKAIAEGGSTLKDYARPNGELGYFSTKFKVYGKEGEQ 227 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQK 289 C CG I R GRSTF C+ CQK Sbjct: 228 C--ECGHTIERYTLGGRSTFLCSSCQK 252 >gi|300361189|ref|ZP_07057366.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] gi|300353808|gb|EFJ69679.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] Length = 276 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFIKKLTNKTILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G+L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNGDLTMVSHLRMEGKYHLVSPDTPKG----KHEHVEFIFTDGTALR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y + +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLTYFINALSRKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +++ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPLSSAQAI------PADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S CG ++ +I GR T +C +CQ Sbjct: 226 DANGQIGGYQKMLQVYGHAGEEC-SKCGTILEKIKVNGRGTTFCPHCQ 272 >gi|302877714|ref|YP_003846278.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] gi|302580503|gb|ADL54514.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] Length = 276 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/295 (39%), Positives = 161/295 (54%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + TVT + +LR+ P + + G+ ++ +SRRAKYL Sbjct: 1 MPELPEVETTRRGLAPYLADATVTGVVTRTPSLRWPIPENLNELLNGQPVVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+E ++I+HLGMSGS I T A PQ H+H + L N + DP Sbjct: 61 LLEFRHG-TLILHLGMSGSLRILPTGTA-----PQPHDHFDLLLDNGCLMR-----LRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADN-----SFNAIYLTHQFHKKNSNLKNALLNQ 174 RRFG + + ++ +P L LGPEP D+ FNA YL + +K +++ Sbjct: 110 RRFGAVLWHQGNIN-THPLLVKLGPEPLDDRDGNCRFNAHYLYQATRGRRVAIKQFIMDS 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 IV G+GNIY EAL+ A ++P+ K L + KL I+ L +AI AGGS Sbjct: 169 AIVVGVGNIYASEALFSAGINPLSKAGELSFAH------CEKLADVIRSTLNEAILAGGS 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD+V+ G+ GYFQ VY + GEPC C I +I Q RS+FYCT+CQK Sbjct: 223 TLRDFVNASGNPGYFQQQHWVYSRAGEPC-RICSAPIMQIKQGQRSSFYCTHCQK 276 >gi|298368684|ref|ZP_06980002.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] gi|298282687|gb|EFI24174.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] Length = 275 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 162/292 (55%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + V+ + L + LR+ +G + + SRRAKYL Sbjct: 1 MPELPEVETTLRGVGPHITGKAVSGVILRQSKLRWPVNPDLPQILQGLLVEECSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGS---FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +I + + +++HLGMSGS F + KP K H+H+ I ++ T + Y+ Sbjct: 61 IIRFQTGV-LLIHLGMSGSLRVFTMGDDRIGKPDK---HDHIDIEFSDGTVLR-----YH 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPR+FG E +Y +P L LGPEP + F+A YL + +K L++ +V Sbjct: 112 DPRKFGAFLWFEGIAEY-HPLLAKLGPEPLSDEFDADYLYRKMKVLKRTVKLVLMDNAVV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L++A + P R L + T L++ ++ VL AI+ GGS+LR Sbjct: 171 VGVGNIYANESLFKAGIVPHRPAYMLSRQECT------TLVETVKTVLKRAIETGGSTLR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ DG GYFQ ++VYG+ G+PC+ CG+ I + V R TFYC++CQK Sbjct: 225 DFVNSDGQSGYFQQEYAVYGRQGKPCV-KCGRPILKEVLGQRGTFYCSHCQK 275 >gi|972980|gb|AAB01505.1| putative formamidopyrimidine-DNA glycosylase; similar to Escherichia coli fpg gene, Swiss-Prot Accession Number P05523 [Neisseria meningitidis serogroup B] gi|1586496|prf||2204218A formamidopyrimidine-DNA glycosylase Length = 275 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQKGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|320157663|ref|YP_004190042.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] gi|319932975|gb|ADV87839.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] Length = 269 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + S IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVG-SAIVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYVAPGEDHDV--LGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|254673150|emb|CBA07967.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha275] gi|325132503|gb|EGC55196.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M6190] gi|325198448|gb|ADY93904.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis G2136] Length = 275 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|27364270|ref|NP_759798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio vulnificus CMCP6] gi|29611711|sp|Q8DDY4|FPG_VIBVU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27360388|gb|AAO09325.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus CMCP6] Length = 269 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + S IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVG-SAIVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP N+F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFG--AWLYAAPGEDHDVLGNIGPEPLTNAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|325130340|gb|EGC53106.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis OX99.30304] gi|325208256|gb|ADZ03708.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NZ-05/33] Length = 280 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|304387407|ref|ZP_07369598.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] gi|304338500|gb|EFM04619.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] Length = 280 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|325136200|gb|EGC58808.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M0579] Length = 280 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + K +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|325205930|gb|ADZ01383.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M04-240196] Length = 280 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|329667766|gb|AEB93714.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii DPC 6026] Length = 276 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE ++R L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVKRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPKG----KHEHVEFVFTDGTALR-----YADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S+ P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKSI------PADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|229169312|ref|ZP_04297022.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] gi|228614075|gb|EEK71190.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] Length = 276 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|258508755|ref|YP_003171506.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|257148682|emb|CAR87655.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|259650061|dbj|BAI42223.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] Length = 282 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 155/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + P+ +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVV-SDAKTPLD--KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------IHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|86147282|ref|ZP_01065597.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] gi|85834997|gb|EAQ53140.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] Length = 269 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 159/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQELKK-LEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + LTN + YNDPR Sbjct: 60 LIETDTG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGAW--LWSAPDEIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + T ++ L L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKV-----TKQEWLL-LTKEIKQVLTTAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCEELIQELKIGQRNTFYCSSCQ 268 >gi|13096238|pdb|1EE8|A Chain A, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 gi|13096239|pdb|1EE8|B Chain B, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 Length = 266 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 29/289 (10%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+LL Sbjct: 1 PELPEVETTRRRLRPLVLGQTLRQV-VHRDPARY----RNTALAEGRRILEVDRRGKFLL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 LEG + ++ HLGM+G F +E T H + L T + ++DPRR Sbjct: 56 FALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLEGRT------LYFHDPRR 100 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + V + P L LGPEP +F + LK LL+Q++ AG+G Sbjct: 101 FGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVG 160 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD--Y 239 NIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Y Sbjct: 161 NIYADEALFRARLSPFRPARSLTEEEAR------RLYRALREVLAEAVELGGSTLSDQSY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 RQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 262 >gi|225075626|ref|ZP_03718825.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] gi|224953048|gb|EEG34257.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] Length = 276 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 163/290 (56%), Gaps = 16/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 +I E + +++HLGMSGS I T+ + I P +H+H+ + T + Y+DP Sbjct: 62 IITFETGI-LLIHLGMSGSLRI-FTANDERIATPDKHDHLDFVFDDGTVLR-----YHDP 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G Sbjct: 115 RKFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+ Sbjct: 174 VGNIYANESLFKAGISPLRPANKLTKKECA------LLVETVKAVLQRAIETGGSTLRDF 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 228 VNSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|315038862|ref|YP_004032430.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] gi|312276995|gb|ADQ59635.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] Length = 276 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKY---HLTTPEAPKD-KHDHVEFIFTDGTVLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNTPEFSEQYFVSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSSANKIPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|240016381|ref|ZP_04722921.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA6140] Length = 275 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LR +V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECAVLVETVKAVLQRAIETGGSTLRGFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|260887311|ref|ZP_05898574.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|330838935|ref|YP_004413515.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] gi|260862947|gb|EEX77447.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|329746699|gb|AEC00056.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] Length = 477 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L V +T++ L + +RF F + RG++I+ + RR KY Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITEVDVLLPRTIRFPEVEAFRSRVRGQRILCLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ LE ++++HL M+G F + P HV + + + + D Sbjct: 61 LMLPLESGETLLLHLRMTGRFY------RRDADTPTGRHVRAIFHLDDGSC---LFFEDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L++ + +P +GPEP F+A YL K + +K+ LL+Q VAG Sbjct: 112 RTFGEIHLLQPQERKAFPAFSCMGPEPLTEEFDASYLYDAMQKSSQRIKSFLLDQGKVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+R+ +L + ++L Q I KV+ + I+ GG++ RDY Sbjct: 172 LGNIYVDEALFFAGVHPLRRAHTLNHDEA------FRLWQAINKVIAEGIEDGGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V +G G+ Q VY + GEPCL CG I +I GR T +C +CQ Sbjct: 226 VDGEGKSGFHQQKLRVYHREGEPCLV-CGTKIEKIRVGGRGTHFCPHCQ 273 >gi|313668434|ref|YP_004048718.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica ST-640] gi|313005896|emb|CBN87352.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica 020-06] Length = 275 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ PC+ CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNLPCV-RCGGLVVKETLGQRGTFYCPNCQK 275 >gi|308389416|gb|ADO31736.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha710] gi|325204297|gb|ADY99750.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240355] Length = 275 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|152986116|ref|YP_001345845.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] gi|166198731|sp|A6UYG0|FPG_PSEA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150961274|gb|ABR83299.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] Length = 270 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 156/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E ++I HLGMSGS ++E + A +H HV I L + + + Y DP Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPAS-----RHEHVDIELASGMSLR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG M L+++ LR LGPEP ++F L ++ +K +++ +V G Sbjct: 110 RRFGAMLWSLAPLEHEL--LRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+ Sbjct: 168 VGNIYASEALFAAGIDPRKPAGSI------SKARYLRLAEEIKRILAIAIERGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 222 VGGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|163942319|ref|YP_001647203.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] gi|163864516|gb|ABY45575.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] Length = 276 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPQIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL K+ + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLT------KEEVERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|227889521|ref|ZP_04007326.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] gi|227849999|gb|EEJ60085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] Length = 276 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIAKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + H K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKY---HLVTPDQPKG-KHEHVEFVFTDGTALR-----YADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +S+ P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHPLSSAKSI------PADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q+ VYG GE C +NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQSMLQVYGHAGEEC-NNCGTILEKIKVNGRGTTFCPHCQ 272 >gi|261346782|ref|ZP_05974426.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] gi|282565180|gb|EFB70715.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] Length = 269 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 117/293 (39%), Positives = 159/293 (54%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + +K++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTIAYTIVRNSRLRWPVSEQIKSLA-DEKVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELNKGW-IIVHLGMSGSVRI----LTEELPEEKHDHVDLILGDGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP + FN YL K+ +K L++ K+ Sbjct: 110 RFGAWLWCEDLDTSSV------LAHLGPEPLSDEFNPQYLFDLAKKRKVAVKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY EAL+ +K+SP + L T DI +L+++I+KVL +I+ GG++L Sbjct: 164 VVGVGNIYANEALFASKISPEKMVNQL-----TLADIT-ELVKQIKKVLQRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D++ DG GYF VYGK GEPC S CG I I Q R+TFYC CQK Sbjct: 218 KDFLQSDGKPGYFAQELFVYGKKGEPC-SMCGTHIESIKQGQRTTFYCPQCQK 269 >gi|325144563|gb|EGC66862.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240013] Length = 275 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|229099046|ref|ZP_04229980.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] gi|229118077|ref|ZP_04247436.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228665300|gb|EEL20783.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228684274|gb|EEL38218.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] Length = 276 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL Q + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTQEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|67458634|ref|YP_246258.1| formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] gi|75536900|sp|Q4UMW5|FPG_RICFE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|67004167|gb|AAY61093.1| Formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] Length = 276 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 163/288 (56%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ ++ I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIELIIENVELKRDNLRYKLSPLLASEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ ++ + +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQPSN----YETKKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL + + +KN +++ +I+ G+ Sbjct: 112 RFGMIYNFKTNF-LEKELFNNLGVEPLSDSLTLEYLKSKLITRKIPIKNLIMDNRIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P + +L D + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLYLARIHPDKLGSNL------RDDEIESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ + CL NC I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGRERQNCL-NCSSTIIKTKHSGRSTFYCRTCQ 271 >gi|229135421|ref|ZP_04264208.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] gi|228647982|gb|EEL04030.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] Length = 276 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL K+ + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLT------KEEVERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|297250511|ref|ZP_06864459.2| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] gi|296838830|gb|EFH22768.1| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] Length = 280 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+L+D+V Sbjct: 179 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLKDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|218768318|ref|YP_002342830.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|9910674|sp|P57014|FPG_NEIMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121052326|emb|CAM08656.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|319410563|emb|CBY90931.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis WUE 2594] Length = 275 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + ++ +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|229019808|ref|ZP_04176610.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] gi|229026034|ref|ZP_04182417.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228735250|gb|EEL85862.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228741479|gb|EEL91677.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] Length = 276 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|229013789|ref|ZP_04170917.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] gi|228747458|gb|EEL97333.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] Length = 276 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDVEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|118594532|ref|ZP_01551879.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] gi|118440310|gb|EAV46937.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] Length = 271 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 164/289 (56%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + L ++K TV I + +LR+ P + S G++I+++ RRAKY+ Sbjct: 1 MPELPEVEVTCQGLKPLLKK-TVHKIVIRNYSLRWPIPTNLSTVVEGQEILEIKRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ N ++I+HLGMSG I AKP K H+HV N + +Y NDPR Sbjct: 60 LVRFS-NGTLILHLGMSGHLYIIPEG-AKPKK---HDHVDFIFGNESVILRY----NDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T ++ L+ LGPEP ++ FNA YL + K+ +K+A+++ V G+ Sbjct: 111 RFGSI-LWTTDNPLEHRLLKNLGPEPLEDGFNAEYLGIRLRAKSQCIKSAIMDGHNVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P RK+ L K L L+ I+ V+ AI GGS++ D+ Sbjct: 170 GNIYASEALFYAGIKPQRKSSKLT------KKELKALVTSIKDVINKAIVKGGSTMNDFF 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G GYFQN VYG+ G+ C C ++ +I RS+F+C CQK Sbjct: 224 DVNGENGYFQNEHKVYGRKGKDCYQ-CDSLVLQITIGQRSSFFCNQCQK 271 >gi|114321796|ref|YP_743479.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] gi|122310767|sp|Q0A598|FPG_ALHEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114228190|gb|ABI57989.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] Length = 277 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ VT + + + LR+ P A G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPLLEGRRVTGMTVRQARLRWPVPAGLPDAITGQTIRAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII----EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L ++I+HLGMSGS + + +CA P +H+HV + L + + + Y Sbjct: 61 LFRTPAG-TLILHLGMSGSLRVIPGQQAGACAVPPG--RHDHVDLRLADGSCLR-----Y 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + + + L LGPEP D +F+ L + +++K +++ I Sbjct: 113 TDPRRFGSLHWCTGEPEAHWL-LHRLGPEPFDTAFDGDRLHRLSRGRRTSVKAFIMDSGI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+RA + P R + +L +++VL +AI AGG++L Sbjct: 172 VVGVGNIYASESLFRAGIHPGRPAGRVGLAR------YRRLAGAVREVLAEAIAAGGTTL 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG GYF +VYG+ G PC CG+ IR+ A RST+YC CQ+ Sbjct: 226 RDFTASDGRPGYFAQTLNVYGRAGAPC-PRCGRSIRQRRIAQRSTWYCPGCQR 277 >gi|329903035|ref|ZP_08273347.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gi|327548513|gb|EGF33179.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 316 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 147/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV D+ L R LR+ FP + G+ + RR KYL Sbjct: 44 MPELPEVEVTRMGIAPHLDGRTVADVVLRRSGLRWPFPPDLAVTLAGRTVRSTGRRGKYL 103 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++++HLGMSG I P+ P H L + DPR Sbjct: 104 LIGFDHG-TLLIHLGMSGHLRI------LPLSTPSEKHDHFDLVVGDQLMRL----TDPR 152 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + LR LG EP + A L HQ +++ +K LL +V Sbjct: 153 RFGAVLWHAQEDGPLEHHVLLRGLGIEPLGATLLAQTLFHQTRGRSAAIKQVLLAGDVVV 212 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P + +L EIQ L AI GGS+LRD Sbjct: 213 GVGNIYASESLFRARINPKTPAGRIALAR------YERLASEIQDTLSAAIAQGGSTLRD 266 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ ++ VY +TGEPC CG +R+I Q RSTFYC +CQK Sbjct: 267 FVGANGQSGYFQQSYFVYDRTGEPC-RVCGLAVRQIKQGQRSTFYCVHCQK 316 >gi|120556654|ref|YP_961005.1| formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] gi|166215632|sp|A1U749|FPG_MARAV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120326503|gb|ABM20818.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] Length = 270 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + T+ + + +LR+ P + GK I V RRAKYL Sbjct: 1 MPELPEVETTRQGIAPHCEGQTIQRVIVRNPSLRWPVPADLAEHLEGKTIRAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + LE S+IVHLGMSGS +I S A H+HV + L N+ R+ +NDP Sbjct: 61 FLHLETG-SVIVHLGMSGSLRVITDDSPAM-----THDHVELVLGNHR-----RLRFNDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T+ ++P + LGPEP FN +L +K + +K+ +++ +V G Sbjct: 110 RRFGCW--LWTTDWNRHPLISALGPEPLSEDFNGAWLFRLSRQKQTPVKSFIMDNHVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL++A + P RK + D +KL + I++ L AI GG++LRD+ Sbjct: 168 VGNIYANEALFKAGIHPKRKAGRI------SLDRYHKLAEAIRETLSAAILMGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ DG GYF + VYGK G PC + C ++ I RST YC CQ+ Sbjct: 222 VNSDGKPGYFAQSLLVYGKAGAPC-TECNTPLKEIRMNNRSTVYCPRCQR 270 >gi|15595554|ref|NP_249048.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|107099341|ref|ZP_01363259.1| hypothetical protein PaerPA_01000353 [Pseudomonas aeruginosa PACS2] gi|116054085|ref|YP_788528.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889098|ref|YP_002437962.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] gi|254237407|ref|ZP_04930730.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|296386853|ref|ZP_06876352.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAb1] gi|21362549|sp|Q9L7T2|FPG_PSEAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122261774|sp|Q02U58|FPG_PSEAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706485|sp|B7V2S0|FPG_PSEA8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9946207|gb|AAG03746.1|AE004473_8 formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|7229496|gb|AAF42853.1| mismatch repair protein MutM [Pseudomonas aeruginosa PAO1] gi|115589306|gb|ABJ15321.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169338|gb|EAZ54849.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|218769321|emb|CAW25081.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] Length = 270 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 155/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E ++I HLGMSGS ++E + A +H HV I L + + Y DP Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPAS-----RHEHVDIELASGMALR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG M L+++ LR LGPEP ++F L ++ +K +++ +V G Sbjct: 110 RRFGAMLWSLAPLEHEL--LRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+ Sbjct: 168 VGNIYASEALFAAGIDPRKPAGSI------SKARYLRLAEEIKRILAIAIERGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 222 VGGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|71083113|ref|YP_265832.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062226|gb|AAZ21229.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] Length = 287 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/300 (38%), Positives = 162/300 (54%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAK---------PIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ +I+ + +K P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNISKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELE-KRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L + + K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQDCK------KIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL + C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|238760449|ref|ZP_04621587.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] gi|238701344|gb|EEP93923.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] Length = 269 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 156/294 (53%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS I E T AK H+HV + ++N + Y D Sbjct: 60 LIELVTGW-IIVHLGMSGSLRILSEETEAAK------HDHVDLVISNGKILR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +S+ L LGPEP + F A YL + K + +K L++ Sbjct: 108 PRRFGAWLWAKDLETSSV------LAHLGPEPLGDEFTADYLFDKSRSKRTVIKQWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A + P R SL + +L+ I+ VL+ +I+ GG+ Sbjct: 162 KVVVGVGNIYASESLFTASILPERAAGSLTKIEAI------QLVATIKAVLLHSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +LRD++ DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 216 TLRDFLQSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|116630047|ref|YP_815219.1| formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri ATCC 33323] gi|238853765|ref|ZP_04644131.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282851274|ref|ZP_06260639.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] gi|122273016|sp|Q041U1|FPG_LACGA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116095629|gb|ABJ60781.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri ATCC 33323] gi|238833574|gb|EEQ25845.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282557242|gb|EFB62839.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] Length = 276 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPKG----KHEHVEFIFTDGTALR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +++ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPLSSAKAI------PADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S+CG ++ +I GR T +C +CQ Sbjct: 226 DANGEIGGYQKMLQVYGHAGEEC-SSCGTILEKIKVNGRGTTFCPHCQ 272 >gi|313112028|ref|ZP_07797813.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] gi|310884315|gb|EFQ42909.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] Length = 270 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 155/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E ++I HLGMSGS ++E + A +H HV I L + + Y DP Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPAS-----RHEHVDIELVSGMALR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG M L+++ LR LGPEP ++F L ++ +K +++ +V G Sbjct: 110 RRFGAMLWSLAPLEHEL--LRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+ Sbjct: 168 VGNIYASEALFAAGIDPRKPAGSI------SKARYLRLAEEIKRILAIAIERGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 222 VGGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|229552557|ref|ZP_04441282.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|258539930|ref|YP_003174429.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] gi|229314109|gb|EEN80082.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|257151606|emb|CAR90578.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] Length = 282 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++K+ +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTAFQKQVVGAAVTTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + P+ +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVV-SDAKTPLD--KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|53802792|ref|YP_115459.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] gi|81680673|sp|Q602J1|FPG_METCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53756553|gb|AAU90844.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] Length = 271 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + D+ + LR+ P G+++ DV RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIAGWRIVDVRVREARLRWPVPADLGETLTGRRLTDVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++I HLGMSGS I C +H+HV + + + Y+DPR Sbjct: 61 LLDFDEG-TLIAHLGMSGSLRI----CKPGFPPRKHDHVDLVFEGDICLR-----YHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++P L LGPEP D +F+ +L +N+ +K+ +++ ++VAG+ Sbjct: 111 RFGCL-LWTAEPPERHPLLAALGPEPLDKAFDGAHLHRLAAGRNTAVKSFIMDSRVVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+RA + P R G Y+ L + I +VL +I+ GG++LRD+ Sbjct: 170 GNIYANEALFRAGIHPARPA-------GKISLARYRNLGEHIAEVLAASIEQGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G+ GYF+ VY + G+PC CG+ IR + R+T+YC CQ+ Sbjct: 223 VNESGAPGYFKQVLRVYDRAGQPC-RVCGEPIRCVRLGQRATYYCPRCQR 271 >gi|254243455|ref|ZP_04936777.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] gi|126196833|gb|EAZ60896.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] Length = 270 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 155/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E ++I HLGMSGS ++E + A +H HV I L + + Y DP Sbjct: 61 LLGAESG-TLISHLGMSGSLRLVESGTPAS-----RHEHVDIELASGMALR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG M L+++ LR LGPEP ++F L ++ +K +++ +V G Sbjct: 110 RRFGAMLWSLAPLEHEL--LRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+ Sbjct: 168 VGNIYASEALFAAGIDPRKPAGSI------SKARYLRLAEEIKRILAIAIERGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 222 VGGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|325982090|ref|YP_004294492.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] gi|325531609|gb|ADZ26330.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] Length = 276 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 161/290 (55%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + ++ + LR+ P + A G I V+RRAKYL Sbjct: 1 MPELPEVETTGRGIAPHVTGQVIANVIIRNSMLRWPIPENLPALLPGLTIQTVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 L++ G ++I HLGMSGS + + + P +H+H + L N T + +DP Sbjct: 61 LLDC-GKGALIFHLGMSGSLRVLLPELIQLPEFPRKHDHFDLILNNQTVLR-----LHDP 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L Q+P L LGPEP F+A YL + + +K L+N +IV G Sbjct: 115 RRFGAV-LWHVGNIAQHPLLMNLGPEPLTADFSAQYLFRETRGLRACIKQTLMNSRIVVG 173 Query: 180 IGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 IGNIY EAL+ A ++P + R I KL+Q ++ L AI+AGGSSLRD Sbjct: 174 IGNIYANEALYLAGINPKVTAGRIGIGR-------YEKLVQAVKHTLQLAIEAGGSSLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +VH DG+ GYFQ + VYG++G+ C C +I++I Q RS+FYC+ CQ Sbjct: 227 FVHSDGTRGYFQQQYWVYGRSGKRC-KQCSNIIKQIKQGQRSSFYCSGCQ 275 >gi|238750803|ref|ZP_04612301.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] gi|238710947|gb|EEQ03167.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] Length = 269 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 158/291 (54%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSEEILSLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTGW-IIVHLGMSGSLRI----LSSETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + +ETS L LGPEP + F A YL + K + +K L++ K+V Sbjct: 110 RFGAWLWAKDLETS-----NVLAHLGPEPLSDDFTAEYLFEKSRNKRTVIKQWLMDNKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A++ P R SL ++ T +L+ I+ VL+ +I+ GG++LR Sbjct: 165 VGVGNIYASESLFTARILPDRAAGSLTESEIT------RLVATIKAVLLHSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ GEPC CG ++ RSTF+C +CQ Sbjct: 219 DFLQSDGKPGYFAQELQVYGRAGEPC-RQCGHLVEIAKHGQRSTFFCRHCQ 268 >gi|229076088|ref|ZP_04209056.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] gi|228706951|gb|EEL59156.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] Length = 276 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|161870169|ref|YP_001599339.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] gi|161595722|gb|ABX73382.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] Length = 275 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|199599522|ref|ZP_03212911.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] gi|199589591|gb|EDY97708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] Length = 282 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 154/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + P+ +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVV-SDAKTPLD--KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAKGNRGSFQDALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|261493056|ref|ZP_05989596.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496344|ref|ZP_05992739.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307988|gb|EEY09296.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311276|gb|EEY12439.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 274 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 158/290 (54%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWAVSPELSQMA-GAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I + I+VHLGMSGS I+ T+ I +H+H+ + TN T + YNDP Sbjct: 60 IIRTDKG-DILVHLGMSGSLRILSQTA---DIAFGKHDHIDLVTTNGTILR-----YNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G Sbjct: 111 RKFGCWLWAEKAEDHEL--LRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE+L+ A + P L N T K +L++ I++VL AI GG++L+D+ Sbjct: 169 VGNIYACESLFMAGIHP-----ELAAQNLTKKQ-CERLVKTIKEVLTKAIIQGGTTLKDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C ++CG+ I V R+T++C CQ+ Sbjct: 223 IQPDGKPGYFSQVLQVYGRKGEAC-NDCGKTIETKVIGQRNTYFCPKCQR 271 >gi|241668887|ref|ZP_04756465.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 61 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAE------RLVTSIKKILDKAIAEGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 274 >gi|325925629|ref|ZP_08187013.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] gi|90101323|sp|Q3BM92|FPG_XANC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|325543978|gb|EGD15377.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] Length = 271 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQNG------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L+ S + L LGPEP ++F YL + + +K L++Q +V Sbjct: 110 PRRFGC--LLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD Sbjct: 168 GVGNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 222 FISPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|78049946|ref|YP_366121.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038376|emb|CAJ26121.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 276 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 6 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 66 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQNG------RVLRFND 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L+ S + L LGPEP ++F YL + + +K L++Q +V Sbjct: 115 PRRFGC--LLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD Sbjct: 173 GVGNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 227 FISPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 276 >gi|254877419|ref|ZP_05250129.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843440|gb|EET21854.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 289 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKEAE------RLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 289 >gi|322835039|ref|YP_004215066.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] gi|321170240|gb|ADW75939.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] Length = 269 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 158/295 (53%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS + E T K H+HV + + + + Y D Sbjct: 60 LVELRTGW-IIIHLGMSGSLRVLPEETEAGK------HDHVDLVMDTG-----HVLRYTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +++ L LGPEP FNA YL + K S +K L++ Sbjct: 108 PRRFGAWLWSSDLAASNV------LAHLGPEPLSEDFNADYLFEKSRTKKSPIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A +SP R SL +D L++ I+ VL+ +I+ GG+ Sbjct: 162 KLVVGVGNIYASESLFVAGISPDRPAHSL------KRDETELLVRTIKAVLLRSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +L+D++ DG GYF VYG+TGEPC + CG I A R+TF+C CQ+ Sbjct: 216 TLKDFLQSDGKPGYFAQELQVYGRTGEPCRA-CGTPIESKKHAQRTTFFCPRCQR 269 >gi|312882923|ref|ZP_07742655.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369442|gb|EFP96962.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 155/290 (53%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V + + LR+D P +G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKVVKVTVRTPKLRWDIPTELKE-MQGQVIQSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 LI+ + + IVHLGMSGS + A PQ H+HV + L N + YNDP Sbjct: 60 LIQTKVG-TAIVHLGMSGSLRVLDAELA-----PQKHDHVDVKLANGKVLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + L+T+GPEP + F+A Y++ + K +K +++ KIV G Sbjct: 109 RRFGAWLWSEDGC---HTVLKTMGPEPLTDDFDADYISAKAVSKRVTVKQFIMDNKIVVG 165 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R +L N KL++EI+KVL AI GG++L+D+ Sbjct: 166 VGNIYANESLFTAGILPTRGAGTLSLNE------WQKLVKEIKKVLSTAIAQGGTTLKDF 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+ C C ++ R+TF+C YCQ+ Sbjct: 220 AQADGKPGYFAQELQVYGKGGQAC-PCCAHPVKEQKIGQRNTFFCEYCQR 268 >gi|229105214|ref|ZP_04235863.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] gi|228678140|gb|EEL32368.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] Length = 276 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQGKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] Length = 275 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + +H + + F+ A G+ I+DV RR K Sbjct: 1 MPELPEVETVRKTLKELVTGKEIGQVSIHWPKMIKQPGEAEQFADALAGQTILDVGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+I + + +++ HL M G + + +K +H HV T+ + + Y D Sbjct: 61 FLIIYTD-DYALVSHLRMEGKYAL----YSKEEDKDKHTHVIFHFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LGPEP F +L + N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGEEFASLPLSQLGPEPFSEEFTPQFLQQRLAGTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R SL D + +L +EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERLASSL------SDDEIGRLHKEIVATLSEAVEKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG + RI+ GR T +C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEAC-KTCGSTLERIIVGGRGTVFCPVCQ 273 >gi|261400681|ref|ZP_05986806.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|269209592|gb|EEZ76047.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|309379224|emb|CBX22181.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 275 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTGI-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ + L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHQLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L K L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG +I + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLIVKETLGQRGTFYCPNCQK 275 >gi|308047858|ref|YP_003911424.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] gi|307630048|gb|ADN74350.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] Length = 270 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V ++ + LR+ G+ I+ V+RRAKYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRVVEEVIVRNPRLRWPVDPLIQQLV-GQTILSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 L++ E + +I+HLGMSGS + P+ P +H+H+ + L + + NDP Sbjct: 60 LVDTEAGV-LILHLGMSGSLRV-----LDPVPEPGKHDHLDLVLDSGAVLR-----LNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L Q P L LGPEP +FNA L K S +K AL++ +V G Sbjct: 109 RRFGAAIWWQLPLDAQ-PLLNKLGPEPLTAAFNAEQLAAALKGKTSAIKTALMDNHVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R +L K L KL++E++ VL AI GG++L+D+ Sbjct: 168 VGNIYANEALFAAGIHPKRAAGNL------SKARLAKLVEEVKAVLARAIQQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ G+ C+ CG ++ I R+T YC +CQ+ Sbjct: 222 TQADGKPGYFVQQLNVYGRGGQACV-QCGAQLKEIKLGQRATVYCGHCQR 270 >gi|212712569|ref|ZP_03320697.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] gi|212684785|gb|EEB44313.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] Length = 269 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 159/292 (54%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNERLRWPVSEQIKRLS-DETVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELRKGW-IIVHLGMSGSVRI----LTEELPEEKHDHVDLILGDGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP + FN YL K+ +K L++ K+ Sbjct: 110 RFGAWLWCEDLASSSV------LAHLGPEPLSDEFNPQYLFDLAAKRKVAVKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY EAL+ +K+SP + T +L + T +L+ +I+KVL +I+ GG++L Sbjct: 164 VVGVGNIYANEALFASKISPEKLTNTLTLHEIT------ELVTQIKKVLQRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D++ DG GYF VYGK GEPC S CG I I Q R+TFYC CQ Sbjct: 218 KDFLQSDGKPGYFAQELFVYGKKGEPC-SLCGTPIESIKQGQRTTFYCPQCQ 268 >gi|325957303|ref|YP_004292715.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] gi|325333868|gb|ADZ07776.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] Length = 276 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 153/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKY---HLTTPEVPKD-KHDHVEFIFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTELQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSLANKIPADKVEDLRKNINETIKIAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHAGEAC-PRCGTTLEKIKVSGRGTTFCPHCQ 272 >gi|91762461|ref|ZP_01264426.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718263|gb|EAS84913.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] Length = 287 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 114/300 (38%), Positives = 161/300 (53%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAK---------PIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ +I+ + K P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNINKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELE-KRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L + + K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQDCK------KIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL + C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|229032230|ref|ZP_04188203.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] gi|228729010|gb|EEL80013.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] Length = 276 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDVEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R++ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPERESSSLTAEE------VERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|73540052|ref|YP_294572.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] gi|90101314|sp|Q476F5|FPG_RALEJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72117465|gb|AAZ59728.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] Length = 284 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 159/298 (53%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVTVRHRGLRWPVEDDLEARLAGRLVRRIERRGKYL 60 Query: 61 LIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYR 113 L+E + ++VHLGM+G+ + P P H+H+ + L ++ + Sbjct: 61 LLECVDEATDDAGWLLVHLGMTGTLRV------LPDAPPAGAHDHLDLVL-DDAGGSRIV 113 Query: 114 VIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + DPRRFG + L E L +P LR LG EP D+ F+ +L +++ +K Sbjct: 114 LRFRDPRRFGAVLWSPLSEAMLP-GHPLLRGLGIEPFDSHFDGSWLHRHTRGRSAAIKTV 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL IV G+GNIY E+L+RA + P L +L Q +++ L AI+ Sbjct: 173 LLAGNIVVGVGNIYASESLFRAGIRPTTPAGRLSLAR------CERLAQSVRETLAQAIE 226 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGS+LRD+V DG+ GYFQ VY + GEPC CG +R+IVQ RSTFYCT+CQ Sbjct: 227 RGGSTLRDFVGSDGASGYFQLECFVYDRAGEPC-KVCGTPVRQIVQGQRSTFYCTHCQ 283 >gi|119943846|ref|YP_941526.1| formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] gi|166198736|sp|A1SR12|FPG_PSYIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119862450|gb|ABM01927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] Length = 270 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 25/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + N +V ++ L LR+ P + + K ++ + RRAKYL Sbjct: 1 MPELPEVETSRKGISPHLINKSVQNVVLRHTQLRWKIPQDLLSDIKDKILLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L ++++HLGMSGS I C P+ +P +H+H + + + Y D Sbjct: 61 LFNFTSG-TLLIHLGMSGSLRI----C--PLNSPPKKHDHADLIFADCL------LRYTD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + + + P L LGPEP ++ FNA YL Q K+ +K +++QK+V Sbjct: 108 PRRFGAILWLGLTPE-DSPLLNKLGPEPLNDDFNAKYLYQQATKRKLPVKQFIMDQKVVT 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ + +SPIR ++ + Y+ L+ EI+++L AI GG++L+ Sbjct: 167 GVGNIYATEALFNSGISPIRAAGNISEKR-------YQILVTEIKEILQQAIKQGGTTLK 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V DG GYFQ VYGKTG+ C S C ++ + A R++ YC CQ Sbjct: 220 DFVGSDGKPGYFQQTLQVYGKTGQQCPS-CETPLKAVKLAARASVYCPECQ 269 >gi|228999366|ref|ZP_04158945.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] gi|229006921|ref|ZP_04164551.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228754321|gb|EEM03736.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228760311|gb|EEM09278.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] Length = 276 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ +P+ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-KYVIVSHLRMEGKYLLHKDD--EPVD--KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|226939249|ref|YP_002794320.1| Fpg [Laribacter hongkongensis HLHK9] gi|254789441|sp|C1DBB4|FPG_LARHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226714173|gb|ACO73311.1| Fpg [Laribacter hongkongensis HLHK9] Length = 272 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 150/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + + LR+ SA G ++ V RRAKYL Sbjct: 1 MPELPEVETVRAGLTPHLTGRQIKAVTVREPRLRWPVDPDLSAKLAGLEVRTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LI +IVHLGMSGS + P P +H+H+ L + + V Y+D Sbjct: 61 LIGFGHEQWLIVHLGMSGSVRV------LPDDTPPQKHDHLDFILDDG-----HLVRYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + L +P L LGPEP + F+A L H + LK AL++ +V Sbjct: 110 PRRFGAV-LWHLGPPDSHPLLSRLGPEPLSDGFDATGLLHALAGRRQALKVALMDNAVVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A L P R SL + +L+Q ++ L AI AGGS+LRD Sbjct: 169 GVGNIYANESLFEAGLDPRRPALSLTADEAG------QLVQSVRHTLARAIAAGGSTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ ++VYG+ G+ C CG ++ R RSTF+C CQ+ Sbjct: 223 FRDAIGKPGYFQQDYAVYGRQGQSC-PRCGGLVERCRLGQRSTFFCPACQR 272 >gi|39931196|sp|Q7MPS3|FPG_VIBVY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 269 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + S IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVG-SAIVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAW--LYAAPGEDHDVLGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 268 >gi|229175294|ref|ZP_04302809.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] gi|228608126|gb|EEK65433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] Length = 276 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|237806907|ref|YP_002891347.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] gi|237499168|gb|ACQ91761.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] Length = 276 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 25/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M+ + V + + LR+ P G+ + + RRAKYL Sbjct: 1 MPELPEVEVSRLGITPWMEGIVVERVVIRHPRLRWPIPSEIRL-LEGQPLRQIERRAKYL 59 Query: 61 LIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L L L + I+HLGMSG I PI P +H+HV + L N + ++ Sbjct: 60 L--LRSTLGTAILHLGMSGRLRI------LPIGTPAEKHDHVDLELANGKLLR-----FH 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + L YQ+P L+TLGPEP ++F A YL + K S +K L++ ++V Sbjct: 107 DPRRFGAL-LWTAEDPYQHPLLKTLGPEPLTDAFTADYLWQRSRKPRSAIKPWLMDNRVV 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A + P R SL TP++ L+ ++KVL AI GG++LR Sbjct: 166 VGVGNIYANEALFMAHIHPKRAVNSL-----TPEES-QALVAAVKKVLARAITQGGTTLR 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ G+PC + C + + RS+ YC CQ Sbjct: 220 DFMRTDGKPGYFVQELLVYGRAGQPC-TVCAHPLEELRLGQRSSVYCPICQ 269 >gi|228993313|ref|ZP_04153229.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] gi|228766381|gb|EEM15024.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ +P+ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-KYVIVSHLRMEGKYLLHKDD--EPVD--KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKRGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|152979915|ref|YP_001354814.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] gi|166215629|sp|A6T2R7|FPG_JANMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151279992|gb|ABR88402.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] Length = 273 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 157/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ +T + L LR+ FP S G+ + RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGQVITGVALRHTGLRWPFPATLSQTLAGRTVRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++I+HLGMSG I + +H+H + + + DPR Sbjct: 61 LIHFDHG-TLIIHLGMSGHLRI----LPSDVPPKKHDHFDLEIGPQL------LRLTDPR 109 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + LRTLG EP + +F+A +L Q ++S +K LL IV Sbjct: 110 RFGAVLWHAAEDGSIENHLLLRTLGVEPLEAAFSAQWLYQQTRNRSSAIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A+++P ++ G + +L + I+++L AI+ GGS+L+D Sbjct: 170 GVGNIYASESLFQARINP----KTPAHRIGLAR--YERLAEAIRQILAAAIEQGGSTLKD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + Y +TGEPC C IR+IVQ RSTFYC CQK Sbjct: 224 FIGVNGQSGYFQQNYFCYARTGEPC-RICKTPIRQIVQGQRSTFYCPNCQK 273 >gi|9971915|gb|AAG10477.1|AF279106_39 predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC31A08] Length = 270 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + K + + +H +NLR+ F + + + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIKK-FKGSLLKEARIHNRNLRWKVVDSFETSVKDQVVESLERRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L + II+HLGMSGS I + IK H+H+ + R+IYNDPR Sbjct: 60 IFKLSNDKKIILHLGMSGSLRIAKNNENFFIK---HDHIELIFDEE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L K++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHLTSDIDKHKL--IKNLGPEPLSKNFNAKDFFSGCSHSKTNIKSYLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P++ L D +L+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLAKIHPLKNANEL------DLDACKRLVAAGKKILEQAIEVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ GEPC + C I + + R+TF+C CQ Sbjct: 223 SADGSPGYFKFKLNVYGREGEPC-NKCKGTICKTIVNQRATFFCEACQ 269 >gi|206969738|ref|ZP_03230692.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|229180905|ref|ZP_04308240.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] gi|229192787|ref|ZP_04319745.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|206735426|gb|EDZ52594.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|228590626|gb|EEK48487.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|228602462|gb|EEK59948.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] Length = 276 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTTQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLSEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|84386871|ref|ZP_00989895.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] gi|84378161|gb|EAP95020.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] Length = 269 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKIKSLTFRTPKLRWDIPQELKR-LEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + LTN + YNDPR Sbjct: 60 LIETDMG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y++ + K+ +K +++ K+V G+ Sbjct: 110 RFGAW--LWSAPDEIHTVLLGSGPEPLTDDFNADYISEKAAKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +++ P+R + Q T L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRIHPLRPANKITQAEWT------LLTEEIKQVLATAIKQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC +I+ + R+TF+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEKC-PNCEALIQELKIGQRNTFFCEECQ 268 >gi|191638698|ref|YP_001987864.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei BL23] gi|190713000|emb|CAQ67006.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus casei BL23] gi|327382739|gb|AEA54215.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W] gi|327385926|gb|AEA57400.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II] Length = 282 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ L +II HL M G + + K P +H+HVT + + + + Y D Sbjct: 61 LMRLSNGETIISHLRMEGRYYV-----VKDASTPFDKHDHVTFTFQDGSQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VA Sbjct: 111 LRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW ++L+P++ +L + K + +IQE+ AI AGG+S Sbjct: 171 GVGNIYADEVLWLSRLNPLQPADTL--KSKEIKTLHDAIIQELNA----AIAAGGTSAHT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 225 YVDAEGNRGSFQNALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|238783983|ref|ZP_04627999.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] gi|238715091|gb|EEQ07087.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] Length = 269 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 156/290 (53%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL IIVHLGMSGS + E T+ K H+HV + ++N + Y D Sbjct: 60 LLELPTGW-IIVHLGMSGSLRVLPEETAAGK------HDHVDLVISNGKILR-----YTD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L T L+ L LGPEP ++ FN YL + K + +K L++ K+V Sbjct: 108 PRRFGAW-LWATDLETSNV-LAHLGPEPLNDEFNPQYLFDKSRNKRTLVKPWLMDNKVVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG++LRD Sbjct: 166 GVGNIYASESLFAAGILPDRAAGSLTQAE------ISLLVATIKAVLLHSIEQGGTTLRD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ DG GYF VYG+ GEPC CGQ+I RSTF+C +CQ Sbjct: 220 FLQSDGKPGYFAQELQVYGRAGEPC-RRCGQLIEIAKHGQRSTFFCRHCQ 268 >gi|167626455|ref|YP_001676955.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596456|gb|ABZ86454.1| DNA-formamidopyrimidine glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 289 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS IK H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGVVKIINTSEYNKIK---HDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FN YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNKMPLEHRVLATHGVEPLTDDFNTEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKEAE------RLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQ+ Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNCYV-CSTKIESLVIAQRNTFFCKKCQR 289 >gi|238789560|ref|ZP_04633344.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] gi|238722313|gb|EEQ13969.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] Length = 269 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 157/291 (53%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLAGQTILYAVVRNARLRWPVSDEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTGW-IIVHLGMSGSLRI----LSEETEPEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + +ETS L LGPEP + F YL + K + +K L++ KIV Sbjct: 110 RFGAWLWAKDLETS-----NVLAHLGPEPLSDEFTTNYLFEKSRNKRTVVKQWLMDNKIV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL ++ + +L+ I+ VL+ +I+ GG++LR Sbjct: 165 VGVGNIYASESLFAAGILPERAAGSLTESE------IARLVATIKAVLLHSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 219 DFLQSDGKPGYFAQELQVYGRAGEPC-RQCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|37678473|ref|NP_933082.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] gi|37197213|dbj|BAC93053.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] Length = 294 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 26 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + S IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 85 IIETDVG-SAIVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 135 RFG--AWLYAAPGEDHDVLGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 193 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 247 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 293 >gi|228941765|ref|ZP_04104312.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974689|ref|ZP_04135255.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981283|ref|ZP_04141583.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228778483|gb|EEM26750.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228785092|gb|EEM33105.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817977|gb|EEM64055.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942369|gb|AEA18265.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 33/297 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-------LIDAIDA 231 G+GNIYV E L+R+++ P R+ SL I+EI+++ L +A+ Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLT-------------IEEIERIYEATVTTLGEAVKR 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGS++R Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 218 GGSTIRTYINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|297181484|gb|ADI17671.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0130_23I23] Length = 271 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 169/288 (58%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + ++ I + + +LR F + KKI V RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISTRKISSIYISKYDLRIKFNKNKKNNILNKKIEGVRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ N S+++HLGM+G+ I T + +H+H+ SL N+KK+ +IYND R Sbjct: 61 LIDFSNNYSLLIHLGMTGNLRIADT-----LSLGKHDHIAFSL----NSKKH-LIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +++ + + L GP+P + S + YL + K + +K+ LLN +I++GI Sbjct: 111 RFGLILIIKKGQRNKL--LENNGPDPFEKSADYKYLHKKIEKSKATIKSILLNNRIISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+ +K+SP++ S+ D +++ +K+L AI++GG++L DY+ Sbjct: 169 GNIYACEILFSSKISPLKLGSSITH------DECKIILKNSKKILKKAINSGGTTLNDYL 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF+ +VY + E C C Q I+RI+Q GRSTF+C+ CQ Sbjct: 223 NADAKPGYFKIQLNVYDRESEDC-KKCSQKIKRIIQNGRSTFFCSKCQ 269 >gi|294501499|ref|YP_003565199.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] gi|294351436|gb|ADE71765.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] Length = 277 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ + +++ HL M G + + H + +P K H HV T+ T + Y D Sbjct: 61 FLKIVLD-DYTMVSHLRMEGKYAL-HENAEEPDK---HVHVFFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYEEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|228923330|ref|ZP_04086618.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836284|gb|EEM81637.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKETLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|71909338|ref|YP_286925.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] gi|90101302|sp|Q479M6|FPG_DECAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71848959|gb|AAZ48455.1| DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] Length = 277 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LR + P + G +++ V RR KYL Sbjct: 1 MPELPEVEVCRRGLEPELAGQVIQGVVIRAPKLRHEIPPALATLLPGCRVVAVRRRGKYL 60 Query: 61 LIELEG---NLSIIVHLGMSGS--FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L++ E ++I+HLGMSG+ F+ AK H+H + L + Sbjct: 61 LLDCERRGVQGTLIIHLGMSGNLRFVPFDLPPAK------HDHFELVLAGQI------LR 108 Query: 116 YNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + +P L T G EP F A +L +++ +K L++ Sbjct: 109 FADPRRFGVVLWQPGPPASAECHPLLATQGIEPLSEMFTAEWLYEAIARRSGPIKPTLMD 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +V GIGNIY E+L+RA +SP+R N + L+ I++ L DAI AGG Sbjct: 169 SHLVVGIGNIYASESLFRAGISPLRAA------NRVSRARYEILVPAIRETLSDAIAAGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 SS+RDYVH DG G FQ VY + +PCL CG ++R+I QAGRST+YCT CQ Sbjct: 223 SSIRDYVHSDGGAGCFQIQAGVYDRANQPCL-RCGGVVRQIRQAGRSTYYCTGCQ 276 >gi|295399493|ref|ZP_06809475.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|312109949|ref|YP_003988265.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] gi|294978959|gb|EFG54555.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|311215050|gb|ADP73654.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] Length = 274 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 150/295 (50%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-------HRKNLRFDFPHHFSAATRGKKIIDV 53 MPELPEVE IRR L+ + TV D+ + H N+ F +G+ I D+ Sbjct: 1 MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANIS-----EFIETIKGQTIRDI 55 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 RR K+L + ++ +I HL M G + + S K P H HV T+ T + Sbjct: 56 HRRGKFLKFIFDEHV-LISHLRMEGRYAV---SKKKDAIEP-HTHVIFQFTDGTELR--- 107 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 Y D R+FG M L + PL LGPEP F A +L + K N +K ALL+ Sbjct: 108 --YRDVRKFGTMHLYPKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLD 165 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V G GNIYV EAL+RA + P R SL L +E+ L +A++ GG Sbjct: 166 QTVVVGFGNIYVDEALFRAGIHPERAASSLTDEEAAC------LHREMVATLQEAVEKGG 219 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S++R YV+ G IG FQ VYG+ GEPC CG I++ V AGR T YC +CQ Sbjct: 220 STVRSYVNTQGEIGMFQLQLFVYGRKGEPC-KRCGNPIQKTVVAGRGTHYCAFCQ 273 >gi|52081409|ref|YP_080200.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|52786785|ref|YP_092614.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|319647317|ref|ZP_08001539.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] gi|81690937|sp|Q65G93|FPG_BACLD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52004620|gb|AAU24562.1| formamidopyrimidine-DNA glycosidase [Bacillus licheniformis ATCC 14580] gi|52349287|gb|AAU41921.1| MutM [Bacillus licheniformis ATCC 14580] gi|317390664|gb|EFV71469.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] Length = 275 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 157/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + + R + P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAGLVRGKTIDAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P+ +H HV T+ + + Y D Sbjct: 61 FLLFHLD-DCVMVSHLRMEGKYGLHQND--EPLD--KHVHVIFRFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PLR LGPEP + F A YL + K N ++K ALL+Q+ V Sbjct: 111 VRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLDQRTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P N T K + L +EI + L +A++AGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHP-----EATANKLTKKQTVL-LHKEIIQTLKEAVEAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYG+ EPC CG I + V GR T +C CQK Sbjct: 225 YINSQGEIGMFQLKLFVYGRKDEPC-KKCGSPIEKTVVGGRGTHFCIKCQK 274 >gi|84621927|ref|YP_449299.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188579098|ref|YP_001916027.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|90101324|sp|Q5H667|FPG_XANOR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123523504|sp|Q2P8V2|FPG_XANOM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689555|sp|B2STU3|FPG_XANOP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84365867|dbj|BAE67025.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523550|gb|ACD61495.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 271 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQNG------RVLRFND 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + L ++ ++ + L LGPEP +F YL + + + +K L++Q +V Sbjct: 110 PRRFGCL-LWQSDIQ-AHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L A +SP+R+ D +L ++ +L AI GG++LRD Sbjct: 168 GVGNIYAAESLHCAGISPLREA------GKVSLDRYRRLAAAVKDILSYAIRRGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 222 FISPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|229062270|ref|ZP_04199591.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] gi|228716998|gb|EEL68679.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] Length = 276 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKVIEDVIVTYPKIVKRPDDAEIFKDMLRGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV + T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFKDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFTQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|229163578|ref|ZP_04291527.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] gi|228619828|gb|EEK76705.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] Length = 276 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+ I +V RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVVVTYPKIVKRPDDAEIFKEMLKGETIENVKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYV-TNYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPKYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|254363106|ref|ZP_04979160.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] gi|153094993|gb|EDN75556.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] Length = 274 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQMA-GAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + I+VHLGMSGS I K I +H+HV + N T + YNDPR Sbjct: 60 IIRTDKG-DILVHLGMSGSLGILQERQQKEIG--KHDHVDLITQNGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G+ Sbjct: 112 KFGCWLWAEKAEDHEL--LRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P L N T K +L++ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHP-----ELAAQNLTKKQ-CERLVKTIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG+ I V R+T++C CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGETC-NDCGKPIETKVIGQRNTYFCPKCQR 271 >gi|75762013|ref|ZP_00741927.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899739|ref|YP_002448150.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228903103|ref|ZP_04067239.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] gi|228910410|ref|ZP_04074225.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|74490499|gb|EAO53801.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542389|gb|ACK94783.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228849176|gb|EEM94015.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|228856512|gb|EEN01036.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] Length = 276 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|295706847|ref|YP_003599922.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] gi|294804506|gb|ADF41572.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] Length = 277 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ + +++ HL M G + + H + +P K H HV T+ T + Y D Sbjct: 61 FLKIVLD-DYTMVSHLRMEGKYAL-HENAEEPDK---HVHVFFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYKEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|294625785|ref|ZP_06704403.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663922|ref|ZP_06729353.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599900|gb|EFF44019.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606307|gb|EFF49527.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 271 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 154/290 (53%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI+ + S ++HLGMSGS ++ + + H+HV ISL + + +NDP Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQSGRLLR-----FNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L+ S + L LGPEP ++F YL + + +K L++Q +V G Sbjct: 111 RRFGC--LLWQSGAQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD+ Sbjct: 169 VGNIYAAESLHRAGISPLREAGKVSLER------YRRLADAVKDILAYAIQRGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 223 ISPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|330447136|ref|ZP_08310786.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491327|dbj|GAA05283.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV +I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVVDQTVKEIIIRNPRLRWPIPEAIKA-IEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+E + +I VHLGMSGS + P+ P +H+HV + LT+ + YND Sbjct: 60 LLETDAGYAI-VHLGMSGSLRV------LPVGTPVEKHDHVDLVLTSGEVLR-----YND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L +GPEP + FN YL + K + +K +++ +V Sbjct: 108 PRRFGAWLWEEKGV--THPVLEKMGPEPLSDEFNVEYLHQKAQGKRTAIKQFIMDNHVVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D Sbjct: 166 GVGNIYANESLFAAGIHPKRAAGKISLARMT------KLVTEIKSVLAFAIQQGGTTLKD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + DG GYF VYGK G+PC CG+ + R+T +C CQK Sbjct: 220 FKNADGKPGYFAQELQVYGKAGKPC-PKCGKPLSEAKIGQRATVFCVDCQK 269 >gi|30022661|ref|NP_834292.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218232074|ref|YP_002369382.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus B4264] gi|229048293|ref|ZP_04193861.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|229072088|ref|ZP_04205297.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|229081838|ref|ZP_04214330.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|229112051|ref|ZP_04241594.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|229129870|ref|ZP_04258836.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|229147146|ref|ZP_04275504.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|229152781|ref|ZP_04280964.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|296505058|ref|YP_003666758.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] gi|39931253|sp|Q817G5|FPG_BACCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29898219|gb|AAP11493.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218160031|gb|ACK60023.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus B4264] gi|228630601|gb|EEK87247.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|228636256|gb|EEK92728.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|228653561|gb|EEL09433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|228671374|gb|EEL26675.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|228701426|gb|EEL53920.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|228711022|gb|EEL62988.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|228723018|gb|EEL74395.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|296326110|gb|ADH09038.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] Length = 276 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|88705463|ref|ZP_01103174.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88700553|gb|EAQ97661.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 270 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 153/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + VT + L LR+ G++I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHCEGRCVTAVVLRDTRLRWPVTPLLPEILNGQRILKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +E +++VHLGMSGS + KP +H+H+ I L + + YNDPR Sbjct: 61 LFRMERG-TLLVHLGMSGSLRV----LLKPQPAAKHDHIDIELESGAVLR-----YNDPR 110 Query: 121 RFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG F V ++ PL LGPEP ++F L + +K +++ V G Sbjct: 111 RFGSFQWFVAGE---EFTPLSRLGPEPLSDAFGGKRLFELSRGRKVAVKPFIMDGATVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R + + +L + I++VL +AID GG++LRD+ Sbjct: 168 VGNIYASEALYLAGIRPDRAAQRVSLAR------YQRLSEHIKQVLTNAIDQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF VYG++GEPC CG+++R V R++ YC CQ+ Sbjct: 222 VGGDGKPGYFAQQLFVYGRSGEPC-KGCGRVLRDKVIGQRASVYCIACQR 270 >gi|54293547|ref|YP_125962.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] gi|81679294|sp|Q5WYY6|FPG_LEGPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53753379|emb|CAH14832.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] Length = 274 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGCMITSVQVRNQKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++ +++HLGMSG H NPQ H+HV + + N + + DP Sbjct: 61 LLHMDKGY-LLIHLGMSG-----HLRIVSQTANPQKHDHVDLHINNGLALR-----FRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV G Sbjct: 110 RRFGLFIYIDEN-PYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 169 IGNIYAAESLFLAKIHPNTSAKKITTEE------FNSLTGHIKKILESAIEAGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 223 YSSDGKPGYFRFALKVYGRKNLPCLV-CENKIETVVIAGRHSAFCPHCQ 270 >gi|58579922|ref|YP_198938.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424516|gb|AAW73553.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 316 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 46 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 105 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + S ++HLGMSGS ++ + + H+HV ISL N RV+ +ND Sbjct: 106 LIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQNG------RVLRFND 154 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + L ++ ++ + L LGPEP +F YL + + + +K L++Q +V Sbjct: 155 PRRFGCL-LWQSDIQ-AHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVV 212 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L A +SP+R+ D +L ++ +L AI GG++LRD Sbjct: 213 GVGNIYAAESLHCAGISPLREA------GKVSLDRYRRLAAAVKDILSYAIRRGGTTLRD 266 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 267 FISPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 316 >gi|157963915|ref|YP_001503949.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] gi|189044678|sp|A8HA27|FPG_SHEPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157848915|gb|ABV89414.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] Length = 271 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 161/290 (55%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TVTD+ + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNTVTDLIVRNPSLRWPVPE-IAKQIIGQTIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI+ + + IVHLGMSGS I+ T+ A+ +H+H+ + L + + +NDP Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRILPATTPAE-----KHDHIDLVLASGKALR-----FNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + +P L LGPEP ++FNA YL K +K L++ IV G Sbjct: 109 RRFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLESLANKKKAIKLCLMDNHIVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D+ Sbjct: 168 VGNIYANEALFAAGIHP------QAEAGKVDAERIEILVSEVKQILAGAIKQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ G+ C + CG M+ I R+T +C+ CQ+ Sbjct: 222 TNADGKPGYFAQKLHVYGRGGKTC-TQCGHMLSEIKLGQRATVFCSLCQQ 270 >gi|146309211|ref|YP_001189676.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina ymp] gi|166198733|sp|A4Y028|FPG_PSEMY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145577412|gb|ABP86944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas mendocina ymp] Length = 270 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E S+I HLGMSGS + C + +H HV I L + + Y DPR Sbjct: 61 LIKAEAG-SLIGHLGMSGSLRL--VECG--LVAAKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E L+++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGALLWCEDPLRHEL--LARLGPEPLGGLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRAR------YLRLAEEIKRILAHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRAGEFC-KVCGTTLREVKLGQRASVYCPRCQR 270 >gi|217962065|ref|YP_002340635.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] gi|217063081|gb|ACJ77331.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] Length = 276 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ +IV GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKIVVGGRGTHYCPICQ 273 >gi|297180566|gb|ADI16778.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_11B23] Length = 270 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 160/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N ++ I + LR F + +I D+ RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISNQSIKKILVRNNKLRIPFNKKLAKEITNIEISDIKRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ SI++HLGM+G+ + +K IK +H+H+ L++ +IYND R Sbjct: 61 IVDFANGYSIVIHLGMTGNLRV-----SKKIKYLKHDHIIFYLSSGN-----VLIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + T+ + L GP+P + NA YL ++ K +++K+ LLN K+++GI Sbjct: 111 RFGLIQIYRTN--ESFFLLDNNGPDPFEKEANADYLFNKIKKSTASIKSILLNHKVISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY----KLIQEIQKVLIDAIDAGGSSL 236 GNIY E L+ +SP R KD+ Y K++QE +K+L AI AGG++L Sbjct: 169 GNIYASEILFATNISPTR----------LGKDVSYDECKKILQESKKILSKAIKAGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + + GYF+ VYG+ G+ C S C I +I Q+ RST++C Q Sbjct: 219 NDYFNAESKPGYFKIQLKVYGRDGQKC-SKCESNILKITQSNRSTYFCKESQ 269 >gi|256843649|ref|ZP_05549137.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|293381756|ref|ZP_06627733.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] gi|256615069|gb|EEU20270.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|290921676|gb|EFD98701.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] Length = 275 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIEKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPDAPKD-KHDHVEFIFTDQTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC + CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPC-AKCGTELEKIKVSGRGTTFCPHCQ 272 >gi|227877045|ref|ZP_03995134.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256850115|ref|ZP_05555545.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|262047414|ref|ZP_06020371.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] gi|227863363|gb|EEJ70793.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256713087|gb|EEU28078.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|260572388|gb|EEX28951.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] Length = 275 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPDAPKD-KHDHVEFIFTDQTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC + CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPC-AKCGTELEKIKVSGRGTTFCPHCQ 272 >gi|295693392|ref|YP_003602002.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] gi|295031498|emb|CBL50977.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] Length = 275 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHEKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T++T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTSDAPKD-KHDHVEFIFTDHTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPAKKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC + CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPC-AKCGTELEKIKVSGRGTTFCPHCQ 272 >gi|88801019|ref|ZP_01116568.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] gi|88776222|gb|EAR07448.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] Length = 282 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 163/286 (56%), Gaps = 22/286 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N T++ + + LR+ P TR ++++ VSRR+KY+ Sbjct: 1 MPELPEVETTCRGIEPHLNNRTISRVTVRDARLRWPIPPELDDWTRDQRVLGVSRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LI+LE ++IVHLGMSGS +++ + K H+HV + L N R+ YND Sbjct: 61 LIQLERG-TLIVHLGMSGSLRVLLDDPTPGK------HDHVDVELDNGV-----RLRYND 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E L+ Q+ + LGPEP + F+ YL K+ + +K+ +++ +IV Sbjct: 109 PRRFGAWLYTEAPLE-QHELIAHLGPEPLTDDFSVDYLWAMSRKRKTKIKSFIMDARIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ + + P + + + +L+ I++VL AI+ GG++LRD Sbjct: 168 GVGNIYANEALFLSGIYPHKLAGKITRAE------CERLVANIKQVLALAINQGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 +V DG GYF + +VYG++GE C CG +IR + RST +C Sbjct: 222 FVGGDGKPGYFAQSLNVYGRSGELC-RQCGTVIRELRTNNRSTCFC 266 >gi|188993761|ref|YP_001905771.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. B100] gi|229621836|sp|B0RZ50|FPG_XANCB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167735521|emb|CAP53736.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris] Length = 271 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 154/292 (52%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAEQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI-YN 117 LI+ + S ++HLGMSGS + P P H+HV ISL N RV+ +N Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRV------LPGDTPPRAHDHVDISLQNG------RVLRFN 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + ++ L +LGPEP +F YL + + +K L++Q +V Sbjct: 109 DPRRFGCLLWQRDCETHEL--LASLGPEPLSPAFTGDYLHALARGRRAAVKTFLMDQAVV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L RA +SP+R+ ++ +L ++++L AI GG++LR Sbjct: 167 VGVGNIYAAESLHRAGISPLREA------GKVSRERYRRLADAVKEILAYAIQRGGTTLR 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG+ GYF+ VYG+ G+ C +CG+ ++ R+T +C CQ+ Sbjct: 221 DFISPDGAPGYFEQELMVYGREGQAC-KHCGRELKHATIGQRATVWCAACQR 271 >gi|327184033|gb|AEA32480.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus amylovorus GRL 1118] Length = 276 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPEAPKD-KHDHVEFIFTDGTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTERQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSLANKIPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|228954855|ref|ZP_04116875.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804844|gb|EEM51443.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 276 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDPEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|312984113|ref|ZP_07791460.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] gi|310894467|gb|EFQ43542.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] Length = 275 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + H + K+ +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKY---HLTTPDAPKD-KHDHVEFIFTDQTALR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPAEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC + CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPC-AKCGTELEKIKVSGRGTTFCPHCQ 272 >gi|52840799|ref|YP_094598.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680527|sp|Q5ZY18|FPG_LEGPH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52627910|gb|AAU26651.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 274 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 159/289 (55%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++ +++HLGMSG H NPQ H+HV + + N + + DP Sbjct: 61 LLHMDKGY-LLIHLGMSG-----HLRIVSQTANPQKHDHVDLHINNGLALR-----FCDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV G Sbjct: 110 RRFGLFIYIDEN-PYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 169 IGNIYAAESLFLAKIHPNTSAKKITTEE------FNSLTGHIKKILESAIEAGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 223 YSSDGKPGYFRFALKVYGRKNLPCLV-CENKIETVVIAGRHSAFCPHCQ 270 >gi|238764332|ref|ZP_04625283.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] gi|238697483|gb|EEP90249.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] Length = 269 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 157/291 (53%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQQVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTGW-IIVHLGMSGSLRI----LSEETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + +ETS L LGPEP N F A YL + K + +K L++ K+V Sbjct: 110 RFGAWLWAKDLETS-----SVLAHLGPEPLSNEFTAEYLFEKSRNKRTVVKQWLMDNKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++LR Sbjct: 165 VGVGNIYASESLFTAGILPERAAGSLTEAEVT------QLVATIKAVLLHSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 219 DFLQSDGKPGYFAQELQVYGRAGELC-RCCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] gi|238066645|sp|B5XTG8|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] Length = 269 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIVRNGRLRWPVSEEIYRLS-DVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREE------CEQLVKVIKLVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|119475393|ref|ZP_01615746.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] gi|119451596|gb|EAW32829.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] Length = 282 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 162/290 (55%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P S+ + +KI+ V RRAKYL Sbjct: 12 MPELPEVETTRRGISPYVQGRIVKQLVVRQPKLRWLIPPQLSSLIKNRKILSVERRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ N SII+HLGMSGS I S P+ H+HV L + + + DPR Sbjct: 72 LLRLD-NGSIIIHLGMSGSLRIIDAS-EPPMA---HDHVDFVLDDGVAMR-----FTDPR 121 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + + + L +LGPEP F+ L + + + +K L++ K V G+ Sbjct: 122 RFGCV-LWQGASEPIHSLLASLGPEPLSLDFDGDLLYQRSRGRKAPVKTFLMDNKNVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R + + + Y+ L +++KVL AI+ GG++LRD+ Sbjct: 181 GNIYANEALFAAGIKPNRASGRISRQR-------YQVLADQVKKVLAQAIEQGGTTLRDF 233 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF+ A VYG+ G+PC+ C Q + I RST YC +CQ+ Sbjct: 234 VGGDGKPGYFKQALKVYGRGGKPCVI-CDQHLIEIRLGQRSTVYCRHCQR 282 >gi|21245003|ref|NP_644585.1| formamidopyrimidine-DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] gi|24211707|sp|Q8PEQ4|FPG_XANAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21110728|gb|AAM39121.1| formamidopyrimidine DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] Length = 271 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI+ + S+++HLGMSGS ++ + + H+HV ISL + + +NDP Sbjct: 61 LIDTDAGGSVLLHLGMSGSLRVLPGDTLPR-----AHDHVDISLQSGRLLR-----FNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L+ S + L LGPEP ++F YL + + +K L++Q +V G Sbjct: 111 RRFGC--LLWQSGTQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD+ Sbjct: 169 VGNIYAAESLHRAGISPLREAGKVSLER------YRRLADAVKDILAYAIQRGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG+ GYF+ VYG+ GE C CG++++ R+T +C CQ+ Sbjct: 223 ISPDGAPGYFEQELFVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|307609359|emb|CBW98845.1| hypothetical protein LPW_06351 [Legionella pneumophila 130b] Length = 274 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++ +++HLGMSG H NPQ H+HV + + N + + DP Sbjct: 61 LLHMDKGY-LLIHLGMSG-----HLRIVSQTANPQKHDHVDLHINNGLALR-----FCDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV G Sbjct: 110 RRFGLFIYIDEN-PYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 169 IGNIYAAESLFLAKIHPNTSAKKITTEE------FNSLTGHIKKILESAIEAGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 223 YSSDGKPGYFRFALKVYGRKNLPCLV-CENKIETVVIAGRHSAFCPHCQ 270 >gi|330505432|ref|YP_004382301.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] gi|328919718|gb|AEB60549.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] Length = 270 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDIRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E S+I HLGMSGS + C + +H HV I L + + Y DPR Sbjct: 61 LIKAEVG-SLIGHLGMSGSLRL--VECG--LAAAKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E L+++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGALLWSEDPLRHEL--LSKLGPEPLGGLFDGERLFQMSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRAR------YLRLAEEIKRILTHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRGGEFC-KVCGSTLREVKLGQRASVYCPKCQR 270 >gi|229158188|ref|ZP_04286255.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] gi|228625146|gb|EEK81906.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] Length = 276 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|156972979|ref|YP_001443886.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi ATCC BAA-1116] gi|166198756|sp|A7MSN3|FPG_VIBHB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156524573|gb|ABU69659.1| hypothetical protein VIBHAR_00657 [Vibrio harveyi ATCC BAA-1116] Length = 269 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQKLKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + LTN + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFG--AWLWSAPNEPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAIKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGVCQK 269 >gi|328471759|gb|EGF42636.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio parahaemolyticus 10329] Length = 269 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQELKL-LEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN+ + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNSKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAW--LWCAPGESHAVLDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + TP++ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQV-----TPQEWVL-LVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|241759723|ref|ZP_04757823.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] gi|241319731|gb|EER56127.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] Length = 275 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 16/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPDLAQILAGCKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 +I E + +++HLGMSGS I T+ + I P +H+H+ + T + Y+DP Sbjct: 61 IITFETGI-LLIHLGMSGSLRI-FTADDERIATPDKHDHLDFVFDDGTVLR-----YHDP 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E + +P L LGPEP + F+A YL + + +K AL++ +V G Sbjct: 114 RKFGAVLWYE-GIAEHHPLLEKLGPEPLSDDFDANYLYQKLKNQKRAVKLALMDNAVVVG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+ Sbjct: 173 VGNIYANESLFKAGISPLRPANKLTKKE------YALLVETVKAVLQRAIETGGSTLRDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ DG GYFQ ++VY + EPC+ CG +I + R TFYC CQK Sbjct: 227 VNSDGKSGYFQQEYTVYSRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|21233569|ref|NP_639486.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770535|ref|YP_245297.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] gi|24211706|sp|Q8P3C4|FPG_XANCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81303518|sp|Q4UNU6|FPG_XANC8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21115430|gb|AAM43368.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575867|gb|AAY51277.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] Length = 271 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 153/292 (52%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAAQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI-YN 117 LI+ + S ++HLGMSGS + P P H+HV ISL N RV+ +N Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRV------LPGDTPPRAHDHVDISLQNG------RVLRFN 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + ++ L +LGPEP +F YL + + +K L++Q +V Sbjct: 109 DPRRFGCLLWQRDCETHEL--LASLGPEPLSAAFTGDYLHALACGRRAAVKTFLMDQAVV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L RA +SP+R+ ++ +L ++++L AI GG++LR Sbjct: 167 VGVGNIYAAESLHRAGISPLREA------GKVSRERYRRLADAVKEILAYAIQRGGTTLR 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG+ GYF+ VYG+ GE C +CG ++ R+T +C CQ+ Sbjct: 221 DFISPDGAPGYFEQELMVYGREGEAC-RHCGGELKHATIGQRATVWCAACQR 271 >gi|300714652|ref|YP_003739455.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] gi|299060488|emb|CAX57595.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 157/293 (53%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNDRLRWPVSLEIQSLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LIELPHGW-IIIHLGMSGSLRV----LPEELPPAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +++ L LGPEP ++F+A YL + K + +K L++ K+ Sbjct: 110 RFGAWLWCTDLAASNV------LAHLGPEPLHDAFSAEYLFDKSRNKRTPVKPWLMDNKL 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R +L Q+ L++ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFVAGIHPDRPAMTLTQDEAA------LLVKTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ DG GYF VYG+ GEPC C I+ A RSTFYC CQK Sbjct: 218 RDFLQTDGKPGYFAQELQVYGRAGEPC-RVCATPIKSAKHAQRSTFYCPTCQK 269 >gi|90580917|ref|ZP_01236719.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] gi|90437988|gb|EAS63177.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAIKA-IEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+E + +I VHLGMSGS + P+ P +H+HV + LT+ + YND Sbjct: 60 LLETDVGYAI-VHLGMSGSLRV------LPVGTPVEKHDHVDLVLTSGEVLR-----YND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L +GPEP + FN YL + K + +K +++ +V Sbjct: 108 PRRFGAWLWEEKGV--THPVLEKMGPEPLSDDFNVEYLHEKAQGKRTAIKQFIMDNHVVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D Sbjct: 166 GVGNIYANESLFAAGIHPKRAAGKISLARMT------KLVAEIKSVLAFAIKQGGTTLKD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 220 FKNADGKPGYFAQELQVYGKAGKPC-PKCGKALSEAKIGQRATVFCSDCQK 269 >gi|54296585|ref|YP_122954.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila str. Paris] gi|81679547|sp|Q5X7I9|FPG_LEGPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53750370|emb|CAH11764.1| hypothetical protein lpp0616 [Legionella pneumophila str. Paris] Length = 274 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++ I++HLGMSG H NPQ H+HV + + N + + DP Sbjct: 61 LLHMDKGY-ILIHLGMSG-----HLRIVSQTANPQKHDHVDLHINNGLALR-----FCDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV G Sbjct: 110 RRFGLFIYIDEN-PYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 169 IGNIYAAESLFLAKIHPNTSAKKITTEE------FNSLTGHIKKILESAIEAGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 223 YSSDGKPGYFRFALKVYGRKNLPCLV-CENKIETVVIAGRHSAFCPHCQ 270 >gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 155/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSEEIYRLS-DVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREE------CEQLVKVIKLVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|260877863|ref|ZP_05890218.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] gi|308089909|gb|EFO39604.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQELKL-LEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAW--LWCAPGESHAVLDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + TP++ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQV-----TPQEWVL-LVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|237728932|ref|ZP_04559413.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] gi|226909554|gb|EEH95472.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELADGW-IIIHLGMSGSLRI----LPEELPADKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R T SL KD L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLTSSL------SKDECELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC + CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPCRA-CGAPIVATKHAQRTTFYCRRCQK 269 >gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYLLS-DVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREE------CEQLVKVIKLVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215630|sp|A6TFM6|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 269 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREE------CEQLVKVIKLVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGMPVVGTKHAQRATFYCRQCQK 269 >gi|148360789|ref|YP_001251996.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|296106144|ref|YP_003617844.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] gi|148282562|gb|ABQ56650.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|295648045|gb|ADG23892.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] Length = 274 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 159/289 (55%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++ +++HLGMSG H NPQ H+H+ + + N + + DP Sbjct: 61 LLHMDKGY-LLIHLGMSG-----HLRIVSQTANPQKHDHIDLHINNGLALR-----FCDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV G Sbjct: 110 RRFGLFIYIDEN-PYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 169 IGNIYAAESLFLAKIHPNTSAKKITTEE------FNALTGHIKKILESAIEAGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 223 YSSDGKPGYFRFALKVYGRKNLPCLV-CENKIETVVIAGRHSAFCPHCQ 270 >gi|324328478|gb|ADY23738.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIITYPKIVKRPDDAEIFKEMLKGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPIN--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|261341756|ref|ZP_05969614.1| hypothetical protein ENTCAN_08235 [Enterobacter cancerogenus ATCC 35316] gi|288316124|gb|EFC55062.1| DNA-formamidopyrimidine glycosylase [Enterobacter cancerogenus ATCC 35316] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + K +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALS-DKPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHSALAHLGPEPLSEAFNADYLRAKCAKKKAPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|42783763|ref|NP_981010.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] gi|81699643|sp|Q72ZF1|FPG_BACC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42739693|gb|AAS43618.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAKIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|261867142|ref|YP_003255064.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412474|gb|ACX81845.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D11S-1] Length = 285 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ A KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPEL-AELHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSG+ I+ H S PI +H+H+ I + N + YNDP Sbjct: 74 VIHTEQGY-IIGHLGMSGTVRIVFHGS---PID--KHDHLDIVVNNGKLLR-----YNDP 122 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E ++ LGPEP FNA YL + HKK + LK L++ +V G Sbjct: 123 RRFGAWLWTEKLDEFHL--FLKLGPEPLSEEFNAEYLFKKLHKKTTALKTVLMDNTVVVG 180 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D+ Sbjct: 181 IGNIYANESLFLCGLHPLKLAANLTRKQCE------RLVDTIKSVLAKAIEQGGTTLKDF 234 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 235 LQPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae NTUH-K2044] gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL ++ +L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSL------SREECEQLVKVIKLVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|301066753|ref|YP_003788776.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] gi|300439160|gb|ADK18926.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] Length = 282 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ L +II HL M G + + K P +H+HVT + + + + Y D Sbjct: 61 LMRLSNGETIISHLRMEGRYYV-----VKDASTPFDKHDHVTFTFQDGSQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VA Sbjct: 111 LRKFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW ++L+P++ +L + K + +IQE+ AI AGG+S Sbjct: 171 GVGNIYADEVLWLSRLNPLQPADTL--KSKEIKTLHDAIIQELNA----AIAAGGTSAHT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV +G+ G FQNA VY + PC CG I +I R T YC +CQ Sbjct: 225 YVDAEGNRGSFQNALHVYDREDTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|228967683|ref|ZP_04128703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792016|gb|EEM39598.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|289209161|ref|YP_003461227.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] gi|288944792|gb|ADC72491.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] Length = 271 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 157/290 (54%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ T+ + + LR+ P G +I ++RRAKYL Sbjct: 1 MPELPEVETTRRGLSPLLEGQTIEWLEVRNGRLRWPVPEELPGRLAGARITTLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++HLGMSGS + H P++ H+H+ + LTN + ++DPR Sbjct: 61 LLNTDRG-GALLHLGMSGS--LRHCMPGVPLRT--HDHLILHLTNGAQVR-----FHDPR 110 Query: 121 RFGF-MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L ET +P L LGPEP D +FN +L + + +K +++Q +V G Sbjct: 111 RFGCCLPLPETG--EPHPLLAALGPEPLDATFNGDHLFRRSRGRRGPIKAFIMDQDVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R + + +L I+ VL AI+ GG++LRD+ Sbjct: 169 VGNIYATEALFLAGIRPGRAAGRVTRAE------YERLAGFIRTVLGAAIEQGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG+ GYF+ + VYG+ GEPCL C +R R++ YC CQ+ Sbjct: 223 LREDGTHGYFRQSLRVYGRAGEPCL-ECATPLRNRRIGQRASAYCPTCQR 271 >gi|332159689|ref|YP_004296266.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603788|emb|CBY25286.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica Y11] gi|325663919|gb|ADZ40563.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859992|emb|CBX70320.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica W22703] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 156/293 (53%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYVVVRNARLRWPVSDEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL+ IIVHLGMSGS I E T K H+HV + ++N + Y D Sbjct: 60 LIELKTGW-IIVHLGMSGSLRILPEETEAEK------HDHVDLVISNGKILR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + +ETS L LGPEP + F A YL + K + +K L++ K Sbjct: 108 PRRFGAWLWAKDLETS-----NVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFTAGILPERAAGSLTETEIT------QLVATIKAVLLHSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 217 LRDFLQSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|206977170|ref|ZP_03238069.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|222098047|ref|YP_002532104.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228987833|ref|ZP_04147942.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141311|ref|ZP_04269849.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|229198734|ref|ZP_04325432.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|206744655|gb|EDZ56063.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|221242105|gb|ACM14815.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228584756|gb|EEK42876.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|228642092|gb|EEK98385.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|228771881|gb|EEM20338.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|47564996|ref|ZP_00236039.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] gi|47557782|gb|EAL16107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 33/297 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-------LIDAIDA 231 G+GNIYV E L+R+++ P R+ SL ++EI+++ L +A+ Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLT-------------VEEIERIYEATITTLGEAVKR 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGS++R Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 218 GGSTIRTYINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ + + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSAEIHSLS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPDDLPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKTLEGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D +L++ I+ VL +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSL------SADECERLVRAIKTVLKRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKDEPC-RVCGTPITATKHAQRATFYCRRCQK 269 >gi|196040881|ref|ZP_03108179.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|229093682|ref|ZP_04224781.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] gi|196028335|gb|EDX66944.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|228689567|gb|EEL43375.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIKNIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|304414128|ref|ZP_07395496.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] gi|304283342|gb|EFL91738.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 153/293 (52%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + + LR+ S+ R + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPYLVDQTLLYVVVRNPRLRWPVSEEISS-LRDQPVFSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL II+HLGMSG I+ A+ +H+H+ + ++N + Y DP Sbjct: 60 LLELAAGW-IIIHLGMSGRLHILPKDRIAE-----KHDHIDLVMSNGKILR-----YTDP 108 Query: 120 RRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RRFG D +++ L LGPEP F YL + K + +K L++ K Sbjct: 109 RRFGAWLWAKDFTASTV------LAHLGPEPLGAEFTEQYLFEKSRHKRTLIKPWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IV GIGNIY E L+ A + P SL QN L+ I+KVL+DAI+ GG++ Sbjct: 163 IVVGIGNIYASECLFVAGILPTEPAGSLTQNECK------LLVSAIKKVLLDAIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ G PC C +I + Q RSTF+C +CQ Sbjct: 217 LRDFLQSDGRPGYFAPRLQVYGRAGAPCY-RCTHLIETVKQGQRSTFFCRHCQ 268 >gi|153834860|ref|ZP_01987527.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] gi|148868731|gb|EDL67808.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + L+N + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAW--LWSAPNEPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGECQK 269 >gi|56964473|ref|YP_176204.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] gi|81678825|sp|Q5WEG7|FPG_BACSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56910716|dbj|BAD65243.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++KN T+ D+ + + D F +G+ I D+ RR K Sbjct: 1 MPELPEVETVRRTLLQLVKNKTIADVDVGWPKMIKEPDDVERFIQLLKGQTIEDIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + + K +H HV S T+ + + Y D Sbjct: 61 FLLFVL-NDYVLVSHLRMEGRYGLYQPTDEKT----KHTHVVFSFTDGSELR-----YAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LG EP F L + K +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGAEHVAMPLAQLGVEPFSEQFTVELLEQAYAKTTRAIKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R SL K+ + L +EI++ L +AI+AGGSS++ Sbjct: 171 GLGNIYVDEALFHAGIHPERTASSL------SKEEYHNLHKEIKRTLKEAIEAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ +PC +C I + V GR T YC CQ Sbjct: 225 YVNGQGEIGMFQQQLHVYGRKQQPC-HHCDTAIEKTVVGGRGTHYCPNCQ 273 >gi|30264656|ref|NP_847033.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Ames] gi|47530126|ref|YP_021475.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187476|ref|YP_030728.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49481341|ref|YP_038631.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140924|ref|YP_085906.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|65321953|ref|ZP_00394912.1| COG0266: Formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A2012] gi|118479733|ref|YP_896884.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis str. Al Hakam] gi|165869590|ref|ZP_02214248.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167634061|ref|ZP_02392384.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|167638114|ref|ZP_02396392.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|170685575|ref|ZP_02876798.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|170705602|ref|ZP_02896066.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|177651233|ref|ZP_02934064.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190569044|ref|ZP_03021944.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|196032694|ref|ZP_03100107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196047497|ref|ZP_03114708.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218905813|ref|YP_002453647.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225866563|ref|YP_002751941.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB102] gi|227817370|ref|YP_002817379.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CDC 684] gi|228917224|ref|ZP_04080781.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929633|ref|ZP_04092651.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935893|ref|ZP_04098703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948310|ref|ZP_04110593.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124152|ref|ZP_04253344.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|229186841|ref|ZP_04313996.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|229601163|ref|YP_002868865.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|254687393|ref|ZP_05151249.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CNEVA-9066] gi|254724956|ref|ZP_05186739.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A1055] gi|254736693|ref|ZP_05194399.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Western North America USA6153] gi|254741730|ref|ZP_05199417.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Kruger B] gi|254754672|ref|ZP_05206707.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Vollum] gi|254757504|ref|ZP_05209531.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Australia 94] gi|301056091|ref|YP_003794302.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis CI] gi|39931254|sp|Q81L04|FPG_BACAN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81685955|sp|Q633L1|FPG_BACCZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81696636|sp|Q6HCU5|FPG_BACHK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30259331|gb|AAP28519.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. Ames] gi|47505274|gb|AAT33950.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181403|gb|AAT56779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49332897|gb|AAT63543.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974393|gb|AAU15943.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|118418958|gb|ABK87377.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Bacillus thuringiensis str. Al Hakam] gi|164714419|gb|EDR19938.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167513931|gb|EDR89299.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|167530862|gb|EDR93564.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|170129727|gb|EDS98590.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|170670039|gb|EDT20779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|172083059|gb|EDT68121.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190559826|gb|EDV13811.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|195994123|gb|EDX58078.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196021712|gb|EDX60408.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218534883|gb|ACK87281.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225786312|gb|ACO26529.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus 03BB102] gi|227007061|gb|ACP16804.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. CDC 684] gi|228596578|gb|EEK54243.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|228659454|gb|EEL15102.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|228811297|gb|EEM57635.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823661|gb|EEM69483.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830020|gb|EEM75639.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842425|gb|EEM87516.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265571|gb|ACQ47208.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|300378260|gb|ADK07164.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|218294712|ref|ZP_03495566.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] gi|218244620|gb|EED11144.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] Length = 264 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 150/291 (51%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ +++ + ++ H+ LR+ + R + + V RR K+L Sbjct: 1 MPELPEVETTRRRLLPLLEGKRLLEV-RHQDPLRY----RHTERARERAVEGVGRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G L ++VHLGM+G F +E T H L + + ++DPR Sbjct: 56 LLALSGGLEMVVHLGMTGGFRLEKTP---------HTRAEFLLEDGV------LHFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +VE + P L LGPEP F + LK LL+Q + AG+ Sbjct: 101 RFGRIWVVERGAYGEIPLLARLGPEPLSPEFRPEAFLQGLRRSRKPLKALLLDQTLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA LSP R R + + +L Q +++VL +A+ GGS+L D Sbjct: 161 GNIYADEALFRAGLSPFRLGREVSEAEA------LRLFQALREVLAEAVALGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG G FQ +VYG+ G PC CG I + V AGR T +C +CQ+ Sbjct: 215 YQQPDGLPGGFQKRHAVYGRAGLPC-PRCGAPIAKGVVAGRGTHHCPWCQR 264 >gi|228960855|ref|ZP_04122488.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798751|gb|EEM45731.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +PI +H HV T+ T Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQED--EPID--KHTHVRFLFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGAILEKTVVGGRGTHYCPICQ 273 >gi|167622081|ref|YP_001672375.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] gi|189044677|sp|B0TN04|FPG_SHEHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167352103|gb|ABZ74716.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] Length = 271 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VTD+ + +LR+ P + G+ I +V RR KYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNQVTDLIVRNPSLRWPVPE-IAKQIIGQTIRNVRRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I S P++ +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRILPAS--TPVE--KHDHIDLVLASGKALR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FNA YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLAALANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVDAER------IEILVSEVKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQK Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGHLLSEIKLGQRATVFCSLCQK 270 >gi|28896963|ref|NP_796568.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|153839968|ref|ZP_01992635.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|260362380|ref|ZP_05775338.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] gi|260897658|ref|ZP_05906154.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|260899588|ref|ZP_05907983.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|31076660|sp|Q87T81|FPG_VIBPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28805171|dbj|BAC58452.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|149746507|gb|EDM57496.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|308087494|gb|EFO37189.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|308108775|gb|EFO46315.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|308115128|gb|EFO52668.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] Length = 269 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQELKL-LEGQVIRNIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIDTDQG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAW--LWCAPGESHAVLEHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + TP++ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQV-----TPQEWVL-LVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|254515835|ref|ZP_05127895.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] gi|219675557|gb|EED31923.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] Length = 270 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + V + L LR+ P RG+ I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHSEGRQVVAVTLRDTRLRWPVPTSLPQMLRGQSILALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ +++VHLGMSGS + +P+ +H+H+ I L + + YNDPR Sbjct: 61 LFRMDRG-TLLVHLGMSGSLRV----LLEPLAPAKHDHIDIELDSGALLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T PL LGPEP + F+ L + +K +++ V G+ Sbjct: 111 RFGSFQWFATG--EPLAPLGKLGPEPLSDDFHGGRLFDLSRGRKIAIKPFIMDGATVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ-EIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R + + + Y+L+ I++VL +AI+ GG++LRD+ Sbjct: 169 GNIYASEALYLAGIRPDRAASRVSR-------VRYELLAGHIKQVLTNAIEQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF VYG++GEPC CG +R V R++ YC CQ+ Sbjct: 222 VGGDGKPGYFAQQLYVYGRSGEPC-KACGTTLRDKVIGQRASVYCIACQR 270 >gi|89076362|ref|ZP_01162695.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] gi|89047933|gb|EAR53524.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] Length = 269 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAIKA-IEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +I VHLGMSGS + P++ +H+HV + LT+ + YNDPR Sbjct: 60 LLETDVGYAI-VHLGMSGSLRV--LPVGAPVE--KHDHVDLVLTSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L +GPEP + FN +L + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKGV--THPVLEKMGPEPLSDEFNVEHLHQKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL++EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVEEIKSVLAFAIKQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKTLSEAKIGQRATVFCSDCQK 269 >gi|239632071|ref|ZP_04675102.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526536|gb|EEQ65537.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 282 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 156/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ L +II HL M G + + K P +H+HVT + + + + Y D Sbjct: 61 LMRLSNGETIISHLRMEGRYYV-----VKDANTPFDKHDHVTFTFQDGSQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VA Sbjct: 111 LRKFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW ++L+P++ +L + K + +IQE+ AI AGG+S Sbjct: 171 GVGNIYADEVLWLSRLNPLQPADTL--KSKEIKTLHDAIIQELNA----AIAAGGTSAHT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 225 YVDAEGNRGSFQNALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|91775039|ref|YP_544795.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] gi|123254763|sp|Q1H3I3|FPG_METFK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91709026|gb|ABE48954.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] Length = 279 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L ++ TVT + + +R+ P H G +++++ RR KY+ Sbjct: 1 MPELPEVEVTRRGLEPLI-GATVTQAVIRQPAMRWPIPSHLPQVLHGARLLELRRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + E +I+HLGMSG ++E + + +H+H + + + DP Sbjct: 60 IARFESG-CLILHLGMSGRLCLLESDTFPE-----KHDHFDLHFADGRVMR-----MRDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L ++ L+ LG EP D +FN +L ++S +K +++ +V G Sbjct: 109 RRFGAV-LWAGDQPDEHSLLKVLGQEPLDEAFNGEFLQQAIRTRSSPIKTVIMDSHLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+RA + P R+L +L++E++ L DA+ AGGSSLRD+ Sbjct: 168 VGNIYASESLFRAGIHPETPARALTLAQ------CRRLVEEVKLTLQDALQAGGSSLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VYG+TG+PC C I + RSTFYC CQ+ Sbjct: 222 FGADGNPGYFQQTYFVYGRTGQPC-RVCQTPIAVLRLGQRSTFYCPACQQ 270 >gi|256850825|ref|ZP_05556214.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260661036|ref|ZP_05861950.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|282934506|ref|ZP_06339761.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297205698|ref|ZP_06923093.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] gi|256615887|gb|EEU21075.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260547973|gb|EEX23949.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|281301453|gb|EFA93742.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297148824|gb|EFH29122.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] Length = 275 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 152/289 (52%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVEI+R+ L ++ + ++ + N+ FS + K+II + R AK+L Sbjct: 1 MPEMPEVEIVRKTLNEIVLGKIIKEVKVWYPNIIIGDSESFSDQLKEKQIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L NL+I+ HL M G + + AK +H+HV T+ T+ + YND R Sbjct: 61 LFRLSDNLTIVSHLRMEGKYRLASPQDAKD----KHDHVEFIFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + + ++ LGPE + F Y K N+K LL+Q +V+G+ Sbjct: 112 KFGRMQLIRTGTEKEKTGIKKLGPEALSDDFTLSYFKQALKNKKKNIKATLLDQDVVSGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +++ P R SL N + KL I +V+ AI G+++ ++ Sbjct: 172 GNIYVDETLWLSEIYPERPANSLADNE------IKKLYLAINQVISQAIKERGTTVHTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G +Q VYG+ GE C CG ++++ AGR T +C CQ+ Sbjct: 226 DAEGQTGGYQKYLKVYGRAGEKCF-RCGNVLQKTKVAGRGTTFCPKCQE 273 >gi|295095221|emb|CBK84311.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 269 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC + CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPCRA-CGTPIIATKHAQRATFYCRQCQK 269 >gi|283836014|ref|ZP_06355755.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] gi|291068196|gb|EFE06305.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] Length = 269 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 155/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIYRLS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEELPADKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L T L + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW-LWTTELD-GHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL KD L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSL------SKDECGLLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RICGTPIVAAKHAQRTTFYCRRCQK 269 >gi|317050104|ref|YP_004117752.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] gi|316951721|gb|ADU71196.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] Length = 269 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 152/292 (52%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHMVGETILHAVVRNSRLRWPVSSEIHALSD-QPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL G II+HLGMSGS + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPGGW-IIIHLGMSGSLRM----LPGELPPAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP + F+ YL + K + +K L++ K+ Sbjct: 110 RFGAWLWTNDLAGSSV------LAHLGPEPLSDDFDGNYLFEKSRGKRTVIKQWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R SL Q T L I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFTAGIIPDRPAMSLSQAEAT------LLANTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD++ DG GYF VYG+ GEPC + CG I RSTF+C CQ Sbjct: 218 RDFLQTDGKPGYFAQELQVYGRAGEPCRA-CGTPIVSGKHGQRSTFWCPRCQ 268 >gi|28867644|ref|NP_790263.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|37999398|sp|Q88AH6|FPG_PSESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28850879|gb|AAO53958.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|331014957|gb|EGH95013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + A +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLAA----LKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ R G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAR------GISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|261408691|ref|YP_003244932.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] gi|261285154|gb|ACX67125.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] Length = 277 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 156/291 (53%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + L R R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+G L ++ HL M G + + +P++ +H HV ++ T + Y D Sbjct: 61 FLRILLDG-LVLVSHLRMEGRYGV--YRAEEPVE--KHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIYV EAL+RAK+ P R SL KD L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSL-------KDAELKRLYHAIVDTLSEAVDAGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC + CG I +IV GR T YC CQ Sbjct: 224 SYVNGQGEMGMFQNSHQIYGRKDKPCHA-CGGPIHKIVVGGRGTHYCPKCQ 273 >gi|296100497|ref|YP_003610643.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054956|gb|ADF59694.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 269 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRLRWPVSDEIHALS-DKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|293390965|ref|ZP_06635299.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951499|gb|EFE01618.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] Length = 285 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 154/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ A KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPEL-AELHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSG+ I+ H S PI +H+H I + N + YNDP Sbjct: 74 VIHTEQGY-IIGHLGMSGTVRIVSHGS---PID--KHDHFDIVMNNGKLLR-----YNDP 122 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E ++ LGPEP FNA YL + +KK + LK L++ +V G Sbjct: 123 RRFGAWLWTEKLDEFHL--FLKLGPEPLSEEFNAEYLFKKLYKKTTALKTVLMDNTVVVG 180 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D+ Sbjct: 181 IGNIYANESLFLCGLHPLKLAANLTRKQCE------RLVDTIKSVLAKAIEQGGTTLKDF 234 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 235 LQPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] Length = 267 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 164/291 (56%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R+L ++ TVT + + R ++ R DF + G +IIDV+RR K Sbjct: 1 MPELPEVETIKRSLAPIV-GKTVTGLMVLRSDIVKRCDFGVKNAV---GSEIIDVTRRGK 56 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+I+L ++VHLGM+G ++ +S +PI H H+ I+L + + Y D Sbjct: 57 YLVIKLSCARHLVVHLGMTGRLLMVASS--EPIA--AHTHMVINLEGEKDVR-----YQD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + V+ + + +LGPEP D SF L + ++++++K LL+Q +VA Sbjct: 108 PRRFGNISFVKDTGGF----FSSLGPEPLDPSFGPEELARRLKRRSASIKPVLLDQGVVA 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ A L P R L + + +L I++V+ AI+ G++ RD Sbjct: 164 GIGNIYADEILFAAGLHPARGASELNEYE------ISRLHAAIKEVITRAIECRGTTFRD 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G FQ +VYG+ G+PC CGQ +++ V GR+T YC CQ+ Sbjct: 218 YRDGFNQPGQFQTHLAVYGRYGQPC-PKCGQPVQKTVIGGRTTHYCAICQE 267 >gi|187932021|ref|YP_001892006.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712930|gb|ACD31227.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 274 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDNLS-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + LI I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLISSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|119897050|ref|YP_932263.1| formamidopyrimidine-DNA glycosylase [Azoarcus sp. BH72] gi|119669463|emb|CAL93376.1| MutM protein [Azoarcus sp. BH72] Length = 272 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ ++ + + LR P + + G+ + VSRRAKYL Sbjct: 1 MPELPEVETTCRGVRPHVEGRRLSAVVVRNPRLRVPVPDNLAQLAAGQVLASVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++VHLGMSGS + + +P +H+H+ + + + DPR Sbjct: 61 LLDFDRG-GLVVHLGMSGSLRV--VAAGEPAG--KHDHLDLVFGETS------LRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + +P L LGPEP D++F+A Y + +K+ L++ + V G+ Sbjct: 110 RFG-MVLWQEGGAVAHPLLAGLGPEPLDDAFDARYWVAATRGLRAPIKHVLMDGRRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P+ ++ +L+ +++ L +AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRSRIHPLEPAGAIGPQRAA------RLVLAVKETLTEAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + Y + GE C CG +IRR V R+TF+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFAYDREGEAC-RVCGSVIRRFVSGQRATFFCPRCQR 270 >gi|119713191|gb|ABL97259.1| putative formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB0_50A10] Length = 269 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 161/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + KN +++I +H +NLR+ ++ + I ++ RRAKY+ Sbjct: 1 MPELPEVETTLRAIEK-FKNQRLSNIKVHNRNLRWKVDKDLEINSKNQIIKNLRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ SII+HLGMSGS I + +K H+HV N ++IYNDPR Sbjct: 60 IFDLD-KCSIILHLGMSGSLRIANNDDNYFLK---HDHVEFLFDNE------KIIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E K++ + LGPEP FN+ YL + +N+K L+NQK V GI Sbjct: 110 RFGSIHLTEDIDKHRL--INHLGPEPLSKEFNSKYLLALCSRSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +K++P++ + L D K+++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLYLSKVNPLKDSSKLTI------DDCKKVVRSSKKILDAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ G C C I + R+T+YC+ CQ Sbjct: 222 SADGSPGYFKFKLNVYGREGLDC-KRCKTKIAKTNINKRATYYCSSCQ 268 >gi|229543561|ref|ZP_04432621.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] gi|229327981|gb|EEN93656.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] Length = 277 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 161/292 (55%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE IRR L ++ T+ + + + P H F+ A G+ I + RR Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKM-VKKPLHTEAFADALAGETIRSLGRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L+ + + +++ HL M G + + + +P++ +H H+ + + Y Sbjct: 60 KFLIFYTD-HYALVSHLRMEGRYRVYDQN--EPVE--KHTHMIFHFQSGKELR-----YK 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L + PL LGPEP ++F YL Q K N+K+ LL+Q ++ Sbjct: 110 DVRKFGTMHLFLKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQTVI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIYV E+L+RA + P RK +SL T KD+ + L EI + L +A++ GGS++R Sbjct: 170 SGLGNIYVDESLFRAHIYPERKAKSL-----TKKDV-HLLHSEIIQTLQEAVEKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ GEPC CG I ++V AGR T YC CQK Sbjct: 224 SYVNSQGQMGMFQLELYVYGRKGEPC-RKCGTPIEKMVTAGRGTHYCPNCQK 274 >gi|329929158|ref|ZP_08282944.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328936835|gb|EGG33270.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 277 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 156/291 (53%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + L R R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+G L ++ HL M G + + +P++ +H HV ++ T + Y D Sbjct: 61 FLRILLDG-LVLVSHLRMEGRYGV--YRAEEPVE--KHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIYV EAL+RAK+ P R SL KD L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSL-------KDAELKRLYHAIVDTLSEAVDAGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC + CG I +IV GR T YC CQ Sbjct: 224 SYVNGQGEMGMFQNSHQIYGRKDKPCHA-CGGPIHKIVVGGRGTHYCPKCQ 273 >gi|163803273|ref|ZP_02197152.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] gi|159172910|gb|EDP57748.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] Length = 269 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I+++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGETIKAFVFRTPKLRWDIPQELKK-LEGQVILNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLSNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFG--AWLWSAPNESHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++ + PIR L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKTHIHPIRPAGKLTMKE------WRLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG +I + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELQVYGKEGEQC-PECGTIIESVKIGQRNTFFCPQCQQ 269 >gi|332969356|gb|EGK08381.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330] Length = 272 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + + + + +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPKLRWQVPSDLADILQHQTVRQCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ + +++HLGMSGS I + K H+H + T + Y+DPR Sbjct: 61 LIQLDTGV-LLIHLGMSGSLRIFRDTLPDAGK---HDHADFVFEDGTVLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + LR LG EP ++ F A YL + K+ +K A+++ IV G+ Sbjct: 112 RFGAI-LWLAGVAEHHELLRNLGVEPLNDEFTADYLFDRLRGKHRAIKLAIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP R +SL K L+ I+++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAISPNRPAQSL------SKQECADLVVAIKQILARAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G CL C +I + V R TFYC CQ+ Sbjct: 225 DSDGKSGYFQQEYKVYGRQGAGCL-RCSGLIEKSVLGQRGTFYCVQCQR 272 >gi|149376939|ref|ZP_01894694.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] gi|149358831|gb|EDM47300.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] Length = 274 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 157/292 (53%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +N T+T + + LR+ P + + G I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHCENRTITQVTVRDGRLRWPVPGNLAELIEGSVIHTVDRRAKYL 60 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LI + ++IVHLGMSGS + T + P+ H+HV ++L N R+ +N Sbjct: 61 LIGVSSANAAGTLIVHLGMSGSLRVI-TDQSAPL---LHDHVELTLDNGI-----RLRFN 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG ET Q+P L +LGPEP FN L K + +K +++ +V Sbjct: 112 DPRRFGCWLWSETP--DQHPLLASLGPEPLAPEFNGRLLYRLSRSKKTPVKPFIMDNHVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL++A + P R + D +L++ I++ L AI GG++LR Sbjct: 170 VGVGNIYANEALFKAGIHPRRAAGRI------SLDRYNRLVEAIRETLSAAILMGGTTLR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ DG GYF + VYG+ GE C CG ++ I RST YC CQ+ Sbjct: 224 DFVNSDGKPGYFAQSLLVYGRNGEFC-RECGHPLKEIRMNQRSTVYCGKCQR 274 >gi|56707813|ref|YP_169709.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89256827|ref|YP_514189.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110670284|ref|YP_666841.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115315213|ref|YP_763936.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118497202|ref|YP_898252.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida U112] gi|134302414|ref|YP_001122384.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|167009866|ref|ZP_02274797.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC200] gi|194323501|ref|ZP_03057278.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208778995|ref|ZP_03246341.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|224456884|ref|ZP_03665357.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254368108|ref|ZP_04984128.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|254369711|ref|ZP_04985721.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|254370309|ref|ZP_04986314.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874627|ref|ZP_05247337.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|81677082|sp|Q5NGY3|FPG_FRATT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56604305|emb|CAG45326.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89144658|emb|CAJ79982.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110320617|emb|CAL08709.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115130112|gb|ABI83299.1| DNA-formamidopyrimidine glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118423108|gb|ABK89498.1| formamidopyrimidine-DNA glycosylase [Francisella novicida U112] gi|134050191|gb|ABO47262.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134253918|gb|EBA53012.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|151568552|gb|EDN34206.1| hypothetical protein FTBG_00064 [Francisella tularensis subsp. tularensis FSC033] gi|157122670|gb|EDO66799.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|194322356|gb|EDX19837.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208744795|gb|EDZ91093.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|254840626|gb|EET19062.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158989|gb|ADA78380.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis NE061598] Length = 274 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDNLS-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|312872916|ref|ZP_07732976.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] gi|311091438|gb|EFQ49822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] Length = 276 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+D+ R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKKAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|123440466|ref|YP_001004460.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166198757|sp|A1JHR7|FPG_YERE8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122087427|emb|CAL10208.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 269 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 155/293 (52%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL+ IIVHLGMSGS I E T K H+HV + ++N + Y D Sbjct: 60 LIELKTGW-IIVHLGMSGSLRILPEETEAEK------HDHVDLVISNGKILR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + +ETS L LGPEP + F A YL + K + +K L++ K Sbjct: 108 PRRFGAWLWAKDLETS-----NVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFTAGILPERAAGSLTETEIT------QLVATIKAVLLHSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 217 LRDFLQSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|146294967|ref|YP_001185391.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|145566657|gb|ABP77592.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|319424485|gb|ADV52559.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens 200] Length = 271 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 161/290 (55%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV+D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLIEQTVSDLVIRNGSLRWPVPD-IAKHIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + + IVHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRILPHNT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP N+FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCELP-EEAHPLLAKLGPEPLTNAFNVNQLATALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI------DNERLSLLVAEVKQILAHAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +G GYF VYG+ GE C +NCG ++ I R+T +C+ CQ Sbjct: 221 FTNAEGKPGYFAQKLHVYGRGGETC-TNCGNLLSEIRLGQRTTVFCSICQ 269 >gi|62261847|gb|AAX78021.1| unknown protein [synthetic construct] Length = 309 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 27 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 86 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 87 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDNLS-----LVYNDPR 138 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 139 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 198 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 199 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 252 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 253 NTEGKPGYFTQQLNVYGRNEQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 300 >gi|192360935|ref|YP_001983958.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] gi|229541072|sp|B3PG51|FPG_CELJU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190687100|gb|ACE84778.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] Length = 270 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VTD+ + + LR+ P S G+++ SRR KYL Sbjct: 1 MPELPEVETTLRGVSPHILGRKVTDLVIRQPRLRWPIPLELSEQLPGQQLKAASRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++I HLGMSGS I KP + P H+H + N + Y DP Sbjct: 61 LLSFNTGTALI-HLGMSGSLRI-----VKPEEPPLFHDHFDMHFGNRI------LRYCDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L E +Q+ LR LGPEP + F YL + K+ +K +++ KIV G Sbjct: 109 RRFGCL-LWEAGDIHQHALLRDLGPEPLGDDFTPAYLYERSRKRTQAIKQFIMDSKIVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + PIRK +L ++ + L+++I+ VL +I GG++LRD+ Sbjct: 168 VGNIYANESLFMAGIKPIRKAGALSRH------MCEDLVRDIRFVLQRSITQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYFQ VYG+ GE C C + ++ I R+T YC CQ+ Sbjct: 222 VGGDGKPGYFQQQLLVYGRGGEAC-KTCQKPLKEIRMNDRTTVYCVTCQQ 270 >gi|95929141|ref|ZP_01311885.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] gi|95134639|gb|EAT16294.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] Length = 272 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 159/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ + D+ ++ LR+ P + G+ ++ + RRAKYL Sbjct: 1 MPELPEVETVCAGLHDLVVGQQIVDVRVYESRLRYPVPMELADVLSGETVVSLRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+++ G +I+HLGMSGS + PQ H+HV I + + ++DP Sbjct: 61 LMDI-GPQVVILHLGMSGSL-----RWVSDGQTPQKHDHVDIVFSGGC------LRFHDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L ++ Q+ L LGPEP + F+ +L + + +K+ L+ ++V G Sbjct: 109 RRFGLIVLAPPPVE-QHRLLAHLGPEPLSDDFDGQWLFEKSRGRRIAIKSLLMENRVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + ++P + + L L+ +I+KVL +AI AGG++L+D+ Sbjct: 168 VGNIYANESLFLSGMAPKKTSGELTDQQ------CVILVDKIKKVLAEAIKAGGTTLQDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G GYFQ VYG+ +PCL CG MI R RSTFYC CQK Sbjct: 222 VNGHGQPGYFQQKLYVYGRDEQPCLI-CGTMIERCRIGQRSTFYCPECQK 270 >gi|319651808|ref|ZP_08005933.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317396460|gb|EFV77173.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 151/292 (51%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L ++ T+ + + + P F A G+ D+ RR Sbjct: 1 MPELPEVETVRRTLQELVIGKTIAHVSVFWPKM-VKHPEELVQFKDALAGQIFQDIGRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L++ + +++ HL M G + + K +H HV T+ T + Y Sbjct: 60 KFLIL-YTIDYALVSHLRMEGRYGL----FLKEEPVDKHTHVIFHFTDGTELR-----YK 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L +++ PL LGPEP F A L + + N+K ALL+QK + Sbjct: 110 DVRKFGTMHLYAKGEEFKTLPLAHLGPEPFGEEFTAEDLAARLARTTRNIKTALLDQKTI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL+R+++ P R SL ++ L L +EI L +A+D GGS++R Sbjct: 170 VGLGNIYVDEALFRSRIHPERAANSLTKSE------LETLHKEIADTLREAVDKGGSTIR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ GE C CG + RIV GR T YC CQK Sbjct: 224 SYVNSQGQIGMFQLELYVYGRKGEDC-KVCGSTLERIVTGGRGTVYCPACQK 274 >gi|149908605|ref|ZP_01897267.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] gi|149808439|gb|EDM68376.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] Length = 270 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 158/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++N +T I + LR+ P A G + V RRAKYL Sbjct: 1 MPELPEVEVSRQGIAPYLENAQITQIIVRNGQLRWPVPMALQDAV-GCTVTSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E +II+HLGMSGS + +S A +H+HV I L + + NDPR Sbjct: 60 LLETEKG-TIIIHLGMSGSLRVLDSSVAVE----KHDHVDIVLNSGKCLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + ++ L +LGPEP + F A L + + +K+ L++ IV G+ Sbjct: 110 RFGSV-LWQVGDVLEHKLLASLGPEPLTDDFTAQRLFDRSRSRKVPVKSFLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A ++P R ++ YK L++E++ VL AI GG++L+D+ Sbjct: 169 GNIYANEALFSAGINPKRAAGNVSLQR-------YKVLVEEVKLVLAKAIAQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+PC CG+ ++ + R+T YC CQ+ Sbjct: 222 TQTDGKPGYFVQELQVYGKAGKPC-PKCGEELKAMKIGQRNTIYCNQCQR 270 >gi|88813702|ref|ZP_01128929.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] gi|88789056|gb|EAR20196.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] Length = 272 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + I + LR+ + ++II + RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHVRGRRIAKIIIRDARLRWPIAENLPRQAEDRRIIGIQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L LE + ++I+HLGMSGS + ++P H H+ I L + + Y D Sbjct: 61 LFRLEADATLILHLGMSGSLRLVAA------QDPPLAHAHLDIILASGQALR-----YTD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + T Q+ L +LGPEP ++F+A YL + K L++ + V Sbjct: 110 PRRFGSLHWC-TGDPAQHHLLASLGPEPLSSAFHADYLYGLSRGRRICAKALLMDSRAVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+RA + P+R + +N +L+Q ++ VL +AI+AGG++LRD Sbjct: 169 GIGNIYANEALYRAAIRPMRSAGCIGRNR------YARLVQAVKSVLAEAIEAGGTTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYF VYG+ G C C +IR R+T+YC CQ Sbjct: 223 FTDSTGQPGYFHRRLEVYGRGGAAC-QRCAGIIRMERLGQRATYYCPGCQ 271 >gi|297539278|ref|YP_003675047.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] gi|297258625|gb|ADI30470.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] Length = 271 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ ++ + V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTRRGLLPLVGKV-VKSVTIRHPTLRWPIPQSLLQILPNQVLRGLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + ++++HLGMSG + T+ +H+H I T+ + DPR Sbjct: 60 LCEYDTG-TLLLHLGMSGRVQLLDTN----YPAEKHDHFDIEFTDGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + L +LGPEP + FNA YL K+ +KNA+++ +V G+ Sbjct: 110 RFGAVLWIDNK-ENHHVLLNSLGPEPLEEGFNAKYLHAALSNKSLVIKNAIMDGHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L KL+ EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPETAANKLTLRQ------CEKLVVEIKSTLNDALSAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+IGYFQ + VY +T EPC C + I+ I RSTFYC CQK Sbjct: 223 GVDGNIGYFQQEYFVYARTDEPC-KVCTKPIKCIRLGQRSTFYCEKCQK 270 >gi|259906762|ref|YP_002647118.1| formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|224962384|emb|CAX53839.1| Formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|283476548|emb|CAY72376.1| formamidopyrimidine DNA glycosylase [Erwinia pyrifoliae DSM 12163] gi|310765972|gb|ADP10922.1| formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 269 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 155/293 (52%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNARLRWPVSQEIHALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPTGW-IIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP +SF+A YL + K + +K L++ K+ Sbjct: 110 RFGAWLWCADLNGSSV------LSHLGPEPLSDSFSARYLFEKSRGKRTAIKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFVAGILPDRPAMALSEQEAG------LLVSTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ DG GYF VYG+TGEPC C + A RSTF+C CQK Sbjct: 218 RDFLQSDGKPGYFAQELQVYGRTGEPC-RVCAMPVESSKHAQRSTFFCRRCQK 269 >gi|254372567|ref|ZP_04988056.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida GA99-3549] gi|151570294|gb|EDN35948.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3549] Length = 274 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDNLS-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638] gi|166988461|sp|A4W514|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 269 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSNEIHTLS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +IL K+ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEQEC---EILVKV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVASKHAQRATFYCRQCQK 269 >gi|323497067|ref|ZP_08102090.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] gi|323317911|gb|EGA70899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] Length = 269 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 147/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ + +++RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGEKIAKLTFRTPKLRWDIPVELKK-LEGQVVRNITRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S IVHLGMSGS + A P K H+HV + L N + YNDPR Sbjct: 60 LIETDAG-SAIVHLGMSGSLRVLDAEIA-PGK---HDHVDLKLANGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L GPEP + FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWSEDG---HHSVLENAGPEPLTDEFNAEYIAAKAINKKVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + L + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSAGIHPTKAAGQLTERQ------WQLLVVEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC C I + R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKKGEPC-PQCAGPIEELKIGQRNTFFCNQCQK 268 >gi|323143805|ref|ZP_08078472.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] gi|322416397|gb|EFY07064.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] Length = 272 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +K+ + + K LR +G K++ + RR KY+ Sbjct: 1 MPELPEVEVTMRGVSPALKDSVIKSVFKGEKKLRIPLSDDLYQ-LQGAKVLSLQRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ SIIVHLGMSG +++H + P H+H ++L N + + NDP Sbjct: 60 IVTTTKG-SIIVHLGMSGHLKVVDHEA---PFI--LHDHFALALDNGKDVR-----LNDP 108 Query: 120 RRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + V E + L+ LGPEP ++FNA YL + K++ +K A+++ K+V Sbjct: 109 RRFGLVAYVKEGNDPLASEVLKNLGPEPFSDAFNADYLYNTLKKRHIAVKQAIMDSKVVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A++SP+R ++ + KL++ I+K+L ++I GG+++RD Sbjct: 169 GVGNIYASESLFLAEISPLRSASTITREE------CEKLVEVIRKLLHESIKKGGTTIRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF +VYG GE C CG I VQ R T++C +CQ Sbjct: 223 FSGADGKPGYFVQNLNVYGHEGEKC-PRCGHPILGTVQGQRHTYFCGHCQ 271 >gi|78486260|ref|YP_392185.1| formamidopyrimidine-DNA glycosylase [Thiomicrospira crunogena XCL-2] gi|123555019|sp|Q31EB2|FPG_THICR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78364546|gb|ABB42511.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Thiomicrospira crunogena XCL-2] Length = 280 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + ++ + I + LR+ G ++ + RRAKYL Sbjct: 1 MPELPEVETTRKGIQPKVEGQAIQKIIIRNGKLRWPVDPSLVEKLPGLVVLSIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+E + +I+HLGMSG+ + +H K H+H+ + L N + + Y+D Sbjct: 61 LLETDQG-HLIIHLGMSGNLRVLPQHEPAVK------HDHIDLLLENG-----FLLRYHD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E ++ ++ L++LGPEP ++FNA YL + + + +K ++N +IV Sbjct: 109 PRRFGSWLWTEAPIQ-EHSLLKSLGPEPLTDAFNAEYLFQKLQGRKTAIKTFIMNNQIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ + + P R +SL T KL I+ VL AI+ GG++L+D Sbjct: 168 GVGNIYANESLFLSGIHPTRPAQSLTLTEAT------KLTAHIKTVLSAAIEQGGTTLKD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF+ +VYG+ PC C I ++V R+ ++C+ CQK Sbjct: 222 FLTPDGKPGYFEQKLNVYGRENLPC-PQCDSAIEKVVLNQRAAYFCSNCQK 271 >gi|304407961|ref|ZP_07389611.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] gi|304342980|gb|EFM08824.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] Length = 299 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ K + + L R R P F+AA G I V RR K Sbjct: 1 MPELPEVETVRRTLNELVAGKTIVRVTVSLPRIIRRPAEPEQFAAALAGHTITSVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L + L+G L ++ HL M G + + + H HV T+ T + Y Sbjct: 61 FLRLVLDG-LVLVSHLRMEGRYGVYRQDELVE-----THTHVIFHFTDGTELR-----YK 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG MDL PPL LG EP D+ F L + + + +K LL+Q V Sbjct: 110 DVRQFGTMDLFAPEEDLLLPPLNKLGMEPLDDDFTEKALRERLSSRTTKIKPLLLDQAYV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL++A + P R +L + T +L + I+ L A+ AGGSS++ Sbjct: 170 VGLGNIYVDEALFQAGIHPERTADTLKRAEWT------RLYEAIRDTLGRAVAAGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+A YG+ GEPC S CG +I + V GR T C CQ Sbjct: 224 SYVNGQGEMGMFQHALLAYGRGGEPCTS-CGTVIEKFVVGGRGTHVCPRCQ 273 >gi|323339591|ref|ZP_08079865.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] gi|323092986|gb|EFZ35584.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] Length = 276 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/295 (35%), Positives = 153/295 (51%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K T+ D+ + + F GKK++DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLIKGKTIKDVNVLYDKIIVGSKAEFCKKLSGKKLLDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L+++ HL M G + + +P++ +H HV L + + + YND R Sbjct: 61 LFRFSGELTMVSHLRMEGKYFVRQK--GEPVE--KHTHVIFYLMDGSE-----LHYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L +T + + LGPEP + +F++ KK +K ALL+Q +VAG+ Sbjct: 112 KFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQTLVAGV 171 Query: 181 GNIYVCEALWRAKLSPI-------RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 GNIY E L+ AK+ P+ RK ++N+ +I E++K A + GG Sbjct: 172 GNIYADEVLYMAKIHPLTPCNELSRKQSDCLRNS---------IIDELEK----ASEKGG 218 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++R Y + G FQ VYGKTGE C CG I +IV R T YC CQ Sbjct: 219 TTIRSYANAFLEEGSFQFFLQVYGKTGEKC-GRCGTPIEKIVVGQRGTHYCPNCQ 272 >gi|94499877|ref|ZP_01306413.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] gi|94428078|gb|EAT13052.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] Length = 278 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 161/301 (53%), Gaps = 35/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + G ++ V RRAKYL Sbjct: 1 MPELPEVETTRAGIEPHIIGHQIKAFHVRQPQLRWPIPTELATLLTGNRVQAVRRRAKYL 60 Query: 61 LIELEGNLS------IIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYR 113 LI++ S +I+HLGMSGS + + AKP +P+ H H I + Sbjct: 61 LIDIAAGKSEDLLGTLIIHLGMSGSLRVIN---AKPYPDPKKHEHFDIEFDDCL------ 111 Query: 114 VIYNDPRRFGF-----MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 V +NDPRRFG D V++ L++ LGPEP ++FN Y+ + ++S +K Sbjct: 112 VRFNDPRRFGACLWQAADEVDSRLQH-------LGPEPLSDTFNGDYIFAKSRGRSSAIK 164 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 +++Q+IV G+GNIY E+L+ A ++P + + K +L+ I+ VL +A Sbjct: 165 TFIMDQRIVVGVGNIYASESLFLAGINPKKAAGKV------SKKKYQELVSAIKIVLDNA 218 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GG++LRD+ DG GYF VYG+ G C+ C Q I++IVQ RSTFYCT CQ Sbjct: 219 IAQGGTTLRDFTSSDGKAGYFAQELRVYGREGLGCI-QCQQPIKQIVQGQRSTFYCTKCQ 277 Query: 289 K 289 + Sbjct: 278 R 278 >gi|229087142|ref|ZP_04219292.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] gi|228696210|gb|EEL49045.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] Length = 276 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKIIKDVIVTYPKLVKRPDDAELFKEMLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ A +H HV T+ T Y D Sbjct: 61 FLLLYVT-KYVIVSHLRMEGKYLLHEGDEA----IDKHTHVRFQFTDGTELH-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + +++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFEEMPLADLGPEPFDAELTPAYLQDKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVETLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPICQ 273 >gi|238794405|ref|ZP_04638016.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] gi|238726306|gb|EEQ17849.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] Length = 269 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 156/291 (53%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELPTGW-IIVHLGMSGSLRI----LSDETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + +ETS L LGPEP + F+ YL + K + +K L++ K+V Sbjct: 110 RFGAWLWAKDLETS-----NVLAHLGPEPLSDEFSPQYLFDKSRNKRTVIKQWLMDNKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A L P R SL T +I+ L+ I+ VL+ +I+ GG++LR Sbjct: 165 VGVGNIYASESLFAAGLLPDRAAGSL-----TNAEIVL-LVATIKAVLLHSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 219 DFLQSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|254374026|ref|ZP_04989508.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] gi|151571746|gb|EDN37400.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] Length = 274 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|138896290|ref|YP_001126743.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermodenitrificans NG80-2] gi|196249911|ref|ZP_03148606.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] gi|134267803|gb|ABO67998.1| Formamidopyrimidine-DNA glycosidase [Geobacillus thermodenitrificans NG80-2] gi|196210425|gb|EDY05189.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] Length = 274 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 157/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ TV D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTVGDVQIFWPNIIRHPQDPEAFAARLVGQTVRGIDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + ++ ++ HL M G + + +P+ +P H HV T+++ + Y D Sbjct: 61 FLKFLFDQDM-LVSHLRMEGRYTV--ADAHEPL-DP-HTHVVFRFTDDSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEGDRQPPLDQLGPEPLSPAFSPAVLAERAAKTKRTVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +++ + +AI GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPERQAASLTDEE------IKRLHEQMVATIGEAIMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC +CQ+ Sbjct: 225 YVNTQGETGTFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPHCQR 274 >gi|213967812|ref|ZP_03395959.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] gi|301382449|ref|ZP_07230867.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato Max13] gi|302061159|ref|ZP_07252700.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato K40] gi|302132048|ref|ZP_07258038.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927588|gb|EEB61136.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + A +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLAA----LKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAK------GISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|15615714|ref|NP_244018.1| formamidopyrimidine-DNA glycosylase [Bacillus halodurans C-125] gi|17375861|sp|Q9K855|FPG_BACHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|10175774|dbj|BAB06871.1| formamidopyrimidine-DNA glycosidase [Bacillus halodurans C-125] Length = 274 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 157/293 (53%), Gaps = 23/293 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ K + D+ + R D F +G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAELVIGKTIEQVDVGWAKMIKRPDDVDQFKWLLKGQTIRSMGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +LL L+ + +++ HL M G + + ++ S AK H HV + T + Y Sbjct: 61 FLLFHLD-DYTLVSHLRMEGRYGLYQQNESVAK------HTHVRFVFGDGTELR-----Y 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M L ++ + PPL LG EP + F+A LT + K + +K+ALL+Q I Sbjct: 109 QDVRKFGTMHLFQSGREQMEPPLAKLGVEPFSDQFSAKLLTERLSKTSRKIKSALLDQGI 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIYV EAL+RA++ P R + + + L Q I L +A++ GGSS+ Sbjct: 169 IVGLGNIYVDEALFRARIHPERLAKDVTVAE------VKILHQAILNTLTEAVNLGGSSI 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + YV+ G +G FQ VYG+ GE C CG I + V GR T +C+ CQK Sbjct: 223 KSYVNGQGEMGMFQQRLDVYGRKGETC-RQCGTPITKTVVGGRGTHFCSVCQK 274 >gi|270265225|ref|ZP_06193487.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] gi|270040859|gb|EFA13961.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] Length = 269 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 153/295 (51%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALS-DRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL+ IIVHLGMSGS + E T K H+HV + ++N + Y D Sbjct: 60 LIELDHGW-IIVHLGMSGSLRMLAEETEAGK------HDHVDLVISNGMTLR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +++ L LGPEP +F YL + K + +K L++ Sbjct: 108 PRRFGAWLWCEDLANSNV------LAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A + P R SL + L++ I+ VL+ +I+ GG+ Sbjct: 162 KLVVGVGNIYASESLFTAGILPDRPAASLSKTEAE------LLVETIKAVLLRSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD++ DG GYF VYG+ GEPC + CG I RSTF+C CQ+ Sbjct: 216 TLRDFLQSDGKPGYFAQELQVYGRAGEPCRA-CGTPIESAKHGQRSTFFCRRCQR 269 >gi|257094300|ref|YP_003167941.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046824|gb|ACV36012.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 275 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L+ +++ + + LR + P ++ G ++ + RR KYL Sbjct: 1 MPELPEVEVSRQGLLPLLRGQRILGAVVRTPRLRHEIPPDLASRLTGLRLDGILRRGKYL 60 Query: 61 LIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L++ E + II+HLGMSGS + P + P H + L + + R Sbjct: 61 LLDCESSARGGWIILHLGMSGSLRL------VPPETPPRKHDHVDLVFGQSVLRLR---- 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + +P L LG EP F+ +L ++ +K L++ + Sbjct: 111 DPRRFGAVLWHAGGDVESHPLLAALGVEPLSEGFSGDWLYAATRRRRVAIKPLLMDSHFL 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+RA +SP+R + +L+ I+ L AI AGGSS+R Sbjct: 171 VGVGNIYAAESLFRAGISPLRTADRISLAR------YRRLVTAIRATLEAAIAAGGSSVR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYVH DG G FQ + +VY + G+PC C +R I Q+GRSTFYC CQ+ Sbjct: 225 DYVHSDGGAGCFQLSCAVYDRAGQPC-PACAGEVRTIRQSGRSTFYCPRCQR 275 >gi|253577307|ref|ZP_04854625.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843311|gb|EES71341.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 285 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V K + + L R R D F A G I+++ RR K Sbjct: 1 MPELPEVETVRRTLTQLIVGKTIQSVHVFLPRIIQRPDDIRRFEAELAGHTILEIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTNNTNTKKYRVIYN 117 +L I ++G L ++ HL M G + +P + +H HV T+ T + Y Sbjct: 61 FLRIIMDG-LVLVSHLRMEGRY-----GLYQPGEEVEKHTHVIFRFTDGTELR-----YK 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L ++ PL LG EP + SF + ++ + +K ALLNQ+ + Sbjct: 110 DVRQFGTMHLFAPGEEFTNKPLVKLGLEPLEESFTLQAFQDKISRRTTKIKPALLNQEYI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL+RA + P L + L +L I + L +A++AGGSS++ Sbjct: 170 VGLGNIYVDEALFRAGIHPEYPADKLTKRQ------LEQLHAAIVETLTEAVEAGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ GEPCL NCGQ + + V GR T +C CQ Sbjct: 224 SYVNGQGEMGMFQHSLRMYGRQGEPCL-NCGQPVMKTVVGGRGTHFCPNCQ 273 >gi|90408782|ref|ZP_01216927.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] gi|90310126|gb|EAS38266.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] Length = 270 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 158/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T I + ++ LR++ P S K+++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLSKYILAKKITRIDIRQRQLRWEIPTDLSVHLVQKELLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSGS + C +H+H + + Y DPR Sbjct: 61 LLNFNSG-TLLIHLGMSGSLRV----CNLNTPPEKHDHADFIFDSCL------LRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L S Y + L LG EP F+ YL H ++ +K +++QK+V G+ Sbjct: 110 RFGAI-LWLGSDPYAHKLLSHLGVEPLTEQFSGEYLHHLSKRRKLPVKQFIMDQKVVTGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ LS +R TRS Q + +L+ EI+KVLI AI+ GG++L+D+V Sbjct: 169 GNIYATEALF---LSALRPTRSASQISLARYQ---RLVLEIKKVLILAIEQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ +YGK G PC S C + + I AGR++ +C +CQ Sbjct: 223 GGDGKPGYFQQTLHIYGKAGAPCPS-CQKPLDAIKLAGRNSVFCAHCQ 269 >gi|85060184|ref|YP_455886.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] gi|123518744|sp|Q2NQU4|FPG_SODGM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84780704|dbj|BAE75481.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] Length = 269 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 153/291 (52%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A R ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPWVAGQTILRAEVRNARLRWPVDEEI-IALRDQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE II+HLGMSG + +P +H+HV + + N + Y DPR Sbjct: 60 LLELEKGW-IIIHLGMSGRLRV----LPQPQPPEKHDHVDLVIGNGCIIR-----YTDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + D + TS L LGPEP + F+ +L + H K +++K L++ +V Sbjct: 110 RFGAWLWSDDLRTSRA-----LAHLGPEPLSDKFDGRWLYQKSHNKRTSIKPWLMDNTLV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL + L + I+ VL+ +I+ GG++LR Sbjct: 165 VGVGNIYASESLFVAGILPGRAAGSLSEEEAG------LLAESIKAVLLRSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYF VYG+ GEPC CG I+ RSTF+C CQ Sbjct: 219 DFLQSDGKPGYFVQELQVYGRGGEPC-RVCGTPIQMAKHGQRSTFFCPACQ 268 >gi|294338795|emb|CAZ87129.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Thiomonas sp. 3As] Length = 291 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 156/302 (51%), Gaps = 35/302 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR-GKKIIDVSRRAKY 59 MPELPEVE+ R+ L + +T + L K LR+ P + T G +I + RR KY Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLG-KPLRW--PLNIDPQTLVGLRIKALERRGKY 57 Query: 60 LLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 LL+ L + +IVHLGMSGS + A +P H HV LT+ + Sbjct: 58 LLLRLSQTAAAPNTAGVLIVHLGMSGSLRWTPAAQAPAPLSP-HEHVEW-LTDRGVLR-- 113 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 DPRRFG + ++P LR LGPEP F+ L + + +K LL Sbjct: 114 ---LRDPRRFGAVLWHAGDEVQRHPLLRVLGPEPLGADFDGATLCRALAGRKAAIKPLLL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-----KLIQEIQKVLID 227 +Q IVAGIGNIY CEAL+RA++ P TP L +L +++ L Sbjct: 171 SQHIVAGIGNIYACEALFRAQIDPR-----------TPASHLRPVHCDRLAAAVRETLRQ 219 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A+ GGSSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C C Sbjct: 220 AVALGGSSLRDFAHSDGELGYFQMQALVYGRAGQPC-RVCATPIRQIVQGQRSTYFCPKC 278 Query: 288 QK 289 QK Sbjct: 279 QK 280 >gi|296134842|ref|YP_003642084.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] gi|295794964|gb|ADG29754.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] Length = 291 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 155/302 (51%), Gaps = 35/302 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR-GKKIIDVSRRAKY 59 MPELPEVE+ R+ L + +T + L K LR+ P + T G +I + RR KY Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLG-KPLRW--PLNIDPQTLVGLRIKALERRGKY 57 Query: 60 LLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 LL+ L + +IVHLGMSGS + T A+ + P H + + + Sbjct: 58 LLLRLSQTAASPNTAGVLIVHLGMSGS--LRWTPAAQ-VPAPLSPHEHVEWLTDRGVLRL 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R DPRRFG + ++P LR LGPEP F L + + +K LL Sbjct: 115 R----DPRRFGAVLWHAGEEVQRHPLLRVLGPEPLGADFKGATLCRALAGRKAAIKPLLL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-----KLIQEIQKVLID 227 +Q IVAGIGNIY CEAL+RA++ P TP L +L +++ L Sbjct: 171 SQHIVAGIGNIYACEALFRARIDPR-----------TPASHLRPVHCDRLAAAVRETLQQ 219 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A+ GGSSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C C Sbjct: 220 AVALGGSSLRDFAHSDGELGYFQMQALVYGRVGQPC-RVCATPIRQIVQGQRSTYFCPKC 278 Query: 288 QK 289 QK Sbjct: 279 QK 280 >gi|94309238|ref|YP_582448.1| formamidopyrimidine-DNA glycosylase [Cupriavidus metallidurans CH34] gi|166198737|sp|Q1LRP7|FPG_RALME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|93353090|gb|ABF07179.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cupriavidus metallidurans CH34] Length = 297 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 108/308 (35%), Positives = 155/308 (50%), Gaps = 32/308 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ I + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVIVRHRGLRWPVEPELEARLTGRIIGRIERRGKYL 60 Query: 61 LIEL--------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 L+E ++VHLGM+G+ + P H+H+ + L Sbjct: 61 LLECLPPADATRAGTGEDAAPGWLLVHLGMTGTLRVY----PAPPAPGAHDHLDLLLAAG 116 Query: 107 TNTKKYRVI---YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 +T + + + DPRRFG + L E+ L +P L LG EP D F+ +L Sbjct: 117 PDTAEAEPVVLRFRDPRRFGAILWTPLAESDLP-GHPLLSRLGIEPFDPRFDGAWLHRGM 175 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K ALL +V G+GNIY E+L+RA + P + L KL Sbjct: 176 RGRSMAIKQALLAGDVVVGVGNIYCSESLFRAGIRPTTQAGRLSLAR------CEKLAVA 229 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +++ L +AI GGS+LRD+V DGS GYFQ VY + GEPC CG IR+I+Q RS Sbjct: 230 VRETLAEAIARGGSTLRDFVGSDGSSGYFQLDCFVYDRAGEPC-RICGTPIRQILQGQRS 288 Query: 281 TFYCTYCQ 288 TFYC +CQ Sbjct: 289 TFYCPHCQ 296 >gi|120596900|ref|YP_961474.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] gi|166198752|sp|A1RE25|FPG_SHESW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120556993|gb|ABM22920.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] Length = 271 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 110/292 (37%), Positives = 159/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVEQTVIDLVIRNGSLRWPVPD-IAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP N+FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCELP-EEAHPLLAKLGPEPLTNAFNVKQLAAALTGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 219 KDFTNADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|90023321|ref|YP_529148.1| formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] gi|123395478|sp|Q21EE3|FPG_SACD2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89952921|gb|ABD82936.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] Length = 271 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 158/290 (54%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ ++ V + + ++LR+ P + + K + + RR KYL Sbjct: 1 MPELPEVETTRRGILPHLEGKRVKAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+E N +I HLGMSGS I K + P H+HV I+ N + Y DP Sbjct: 61 LLEF-ANGHVIWHLGMSGSLRI-----IKADEPPMVHDHVDIAFGGNLALR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + ++ ++ L LGPEP ++FN+ YL + K++ ++K +++ K+V G Sbjct: 110 RRFGAVLWTNEAI-LEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSKVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ + + P++ L Q DI EI+ VL AI+ GG++LRD+ Sbjct: 169 VGNIYANEALFNSAIHPLKAAGKLSQKQC---DI---FCSEIKSVLAKAIEQGGTTLRDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF +VYG+ G+ C C + + R+T YCT+CQK Sbjct: 223 VGGDGKPGYFAQELNVYGRGGKAC-KKCRKPLTEKKLGQRTTVYCTHCQK 271 >gi|167856318|ref|ZP_02479048.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219871061|ref|YP_002475436.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] gi|254789440|sp|B8F586|FPG_HAEPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167852548|gb|EDS23832.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219691265|gb|ACL32488.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] Length = 274 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + +I + + LR+ S +G II++ RRAKYL Sbjct: 1 MPELPEVETSMRGISPYLVGQKIKEIIVRQPKLRWAVSSELST-MQGATIIEIYRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+VHLGMSGS I K I +H+H+ + N + YNDPR Sbjct: 60 IIQTDKG-DILVHLGMSGSLGILSVKENKAID--KHDHIDLITENGVILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + + L LGPEP +F + YL + K +KN ++N IV G+ Sbjct: 112 KFGTWLWAEQAETAEL--LANLGPEPLSEAFTSGYLFEKSRNKTVAVKNFIMNNAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P L N T K +L+ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHP-----ELAAQNLTAKQ-CERLVTVIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C ++CG +I V R++FYC CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEEC-NDCGSIIEAKVIGQRNSFYCPKCQR 271 >gi|24376198|ref|NP_720242.1| formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] gi|29611714|sp|Q8E8D9|FPG_SHEON RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24351249|gb|AAN57685.1|AE015904_8 formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] Length = 271 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 161/292 (55%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVPE-LAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + +P L LGPEP ++FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCQLP-EEAHPLLEKLGPEPLTDAFNVNQLAASLAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQ Sbjct: 219 KDFTNADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCSICQ 269 >gi|227534793|ref|ZP_03964842.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187549|gb|EEI67616.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 295 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 14 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ L +II HL M G + + K P +H+HVT + + + + Y D Sbjct: 74 LMRLSNGETIISHLRMEGRYYV-----VKDANTPFDKHDHVTFTFQDGSQLR-----YRD 123 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VA Sbjct: 124 LRKFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVA 183 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW ++L+P++ +L + K + +IQE+ AI AGG+S Sbjct: 184 GVGNIYADEVLWLSRLNPLQPADTL--KSKEIKTLHDAIIQELNA----AIAAGGTSAHT 237 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 238 YVDAEGNRGSFQNALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 286 >gi|77919460|ref|YP_357275.1| formamidopyrimidine-DNA glycosylase [Pelobacter carbinolicus DSM 2380] gi|90101308|sp|Q3A3F2|FPG_PELCD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77545543|gb|ABA89105.1| DNA-(apurinic or apyrimidinic site) lyase [Pelobacter carbinolicus DSM 2380] Length = 271 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + V + + + LR+ P + SA G V RRAKYL Sbjct: 1 MPELPEVETIRRGISPWVIDQKVVAVVVRQPRLRWPVPSNLSACLVGYAFSGVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ +++HLGMSGS I P P H+HV I+L + + ND Sbjct: 61 LLPNPAG-CLLIHLGMSGSLRI------VPSDTPPAAHDHVDIALESGRTLR-----LND 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + +E + + L LGPEP F L + + +KN +++Q+IV Sbjct: 109 PRRFGAVLWIEGRPE-DHALLAHLGPEPFAVEFTGAMLYARSRGRKLAVKNFIMDQRIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA + P+R + + L + +++VL AI+AGG++LRD Sbjct: 168 GVGNIYASEALYRAGIHPMRAAGRVSRRR------YAALAEAVRQVLTAAIEAGGTTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF VYG+ G+PC+ +CG+ IR RS+++CT CQ+ Sbjct: 222 FTDENGRPGYFSQRLLVYGREGQPCV-HCGRPIRCETIGQRSSYFCTRCQR 271 >gi|89094942|ref|ZP_01167873.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] gi|89080808|gb|EAR60049.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] Length = 270 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 158/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + TVT++ + NLR+ P + +GK+I V RR KY+ Sbjct: 1 MPELPEVETTCRGISPHTVKKTVTELVIRNPNLRWPVPDFLESRVQGKQINSVGRRGKYI 60 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+++ EG+ +++HLGMSGS + + P+K H+HV L++ + DP Sbjct: 61 LLQMDEGD--VMIHLGMSGSLRMVRSD-TPPLK---HDHVDFCLSDGNALR-----LTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + ++ L LGPEP FNA YL + +K +++ ++V G Sbjct: 110 RRFGSVLWQPKGEHHEL--LYKLGPEPLSEGFNAEYLKSCCDGRKVAIKQLIMDSQVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R ++ + L L+ EI+KVL AI+ GG++L+D+ Sbjct: 168 VGNIYATEALFAAAIDPRRAAGNISRAR------LENLVVEIKKVLSAAIEQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF+ SVYG+ GEPC+ C + + R+T +C +CQ+ Sbjct: 222 VGGDGKPGYFKQELSVYGRKGEPCV-KCMAPLTEVRLGQRATVFCKHCQR 270 >gi|271498731|ref|YP_003331756.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] gi|270342286|gb|ACZ75051.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] Length = 269 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 160/294 (54%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + T+ + LR+ P S + ++ V RRAKY Sbjct: 1 MPELPEVETSRRGISPWLVGRTILYAEVRNARLRWPVSPEILSLSD--TPVLSVQRRAKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+EL II+HLGMSGS + ++P K H+HV + + + + Y DP Sbjct: 59 LLLELPTGW-IIIHLGMSGSLRV-LPEYSEPDK---HDHVDLVMDSGKVLR-----YTDP 108 Query: 120 RRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RRFG DL +S+ L LGPEP + F+ YL + H + + +K +++ K Sbjct: 109 RRFGAWLWCDDLANSSV------LAHLGPEPLSDDFSGDYLFSRCHGRKTPIKLWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL Q ++L+Q I++VL +I+ GG++ Sbjct: 163 LVVGVGNIYASESLFNAGILPERPAGSLSQQEA------HQLVQSIKQVLQRSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG+ G+PC +CG +I I Q RSTF+C CQ+ Sbjct: 217 LRDFLQSDGKPGYFAQELQVYGRNGKPC-HHCGTLIDSIKQGQRSTFFCKRCQR 269 >gi|188532230|ref|YP_001906027.1| formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] gi|238689742|sp|B2VF70|FPG_ERWT9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|188027272|emb|CAO95115.1| Formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] Length = 269 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 154/293 (52%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSPEIHALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPAGW-IIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP +SF+A YL + K + +K L++ K+ Sbjct: 110 RFGAWLWCTDLDASSV------LSHLGPEPLSDSFSASYLFEKSRGKRTAVKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFVAGILPDRPAMALSEAEAG------LLVSTIKGVLMRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ DG GYF VYG+ GEPC C I RSTF+C CQK Sbjct: 218 RDFLQSDGKPGYFAQELQVYGRAGEPC-RKCAMPIESSKHGQRSTFFCRRCQK 269 >gi|157373071|ref|YP_001481060.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] gi|166988464|sp|A8GLE2|FPG_SERP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157324835|gb|ABV43932.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] Length = 269 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 152/295 (51%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS + E T K H+HV + ++N + Y D Sbjct: 60 LIELASGW-IIVHLGMSGSLRMLAEETEAGK------HDHVDLVISNGMTLR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +++ L LGPEP +F YL + K + +K L++ Sbjct: 108 PRRFGAWLWCDDLATSNV------LAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A + P R SL + L+ I+ VL+ +I+ GG+ Sbjct: 162 KLVVGVGNIYASESLFTAGILPDRPAGSLSKVEAE------VLVATIKAVLLRSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD++ DG GYF VYG+ GEPC + CG I RSTF+C CQ+ Sbjct: 216 TLRDFLQSDGKPGYFAQELQVYGRAGEPCRA-CGTPIESAKHGQRSTFFCPRCQR 269 >gi|332995179|gb|AEF05234.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas sp. SN2] Length = 269 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 159/295 (53%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ +I + + +R+ P + A G+K+I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPYLLNETIDNIIVRERRMRWPVPEDVALAI-GQKVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE E ++I+HLGMSG + S P+ +H+HV I + + +NDPR Sbjct: 60 MIETEAG-TLILHLGMSGKLRVIDAST--PVA--KHDHVDIVMATGKCLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPP-----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RFG + +Q P L LGPEP + F+ L K S +KN +++ Sbjct: 110 RFG-------AFLWQPPGEALKLLANLGPEPLTDDFDDRRLFTLSRGKKSTVKNFIMDNA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGS 234 +V G+GNIY EAL+ A + P R+ G YK L Q I++VL AI+ GG+ Sbjct: 163 VVVGVGNIYANEALFLAGIDPRREA-------GKVSSTRYKNLTQIIKQVLAKAIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +L+D+ DG+ GYF +VYG+ GEPC C I+ V R+TF+C CQ+ Sbjct: 216 TLKDFAQTDGNPGYFAQHLNVYGRKGEPC-EVCKTEIQSKVIGQRNTFFCKQCQR 269 >gi|116495189|ref|YP_806923.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei ATCC 334] gi|116105339|gb|ABJ70481.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus casei ATCC 334] Length = 282 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ L +II HL M G + + K P +H+HVT + + + + Y D Sbjct: 61 LMRLSNGETIISHLRMEGRYYV-----VKDANTPFDKHDHVTFTFQDGSQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VA Sbjct: 111 LRKFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW ++L+P++ +L + K + +IQE+ AI AGG+S Sbjct: 171 GVGNIYADEVLWLSRLNPLQPADTL--KSKEIKTLHDAIIQELNA----AIAAGGTSAHT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 225 YVDAEGNRGSFQNALHVYDREGTPC-DRCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|330957096|gb|EGH57356.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ +++ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYASEALFAAGIDPRREAKTISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|328676674|gb|AEB27544.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida Fx1] Length = 274 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ IK H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKIK---HDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|56421263|ref|YP_148581.1| formamidopyrimidine-DNA glycosylase [Geobacillus kaustophilus HTA426] gi|81675729|sp|Q5KWC3|FPG_GEOKA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56381105|dbj|BAD77013.1| formamidopyrimidine-DNA glycosidase [Geobacillus kaustophilus HTA426] Length = 274 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 156/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|170724448|ref|YP_001758474.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] gi|238688687|sp|B1KL38|FPG_SHEWM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169809795|gb|ACA84379.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] Length = 271 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDQEVTGLTVRNASLRWPVPD-LAQQIVGQTIRSVHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LI+ + + IVHLGMSGS + E T K H+H+ +SL + + +ND Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRVVTELTPVEK------HDHIDLSLASGKILR-----FND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP ++FN YL K +K L++ IV Sbjct: 108 PRRFGAWLWYELPID-AHPLLSKLGPEPLTDAFNPSYLFESLKGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P + + Q L L+ E++++L +AI GG++L+D Sbjct: 167 GVGNIYANEALFAAGIHPQMEAGKVDQER------LIILVSEVKQILANAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 221 FTNAEGKPGYFAQKLHVYGRGGESC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|57117507|gb|AAW33970.1| MutM [symbiont bacterium of Paederus fuscipes] Length = 270 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 157/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ V + + + LR+ + G++I+ V RRAKYL Sbjct: 1 MPELPEVETIRRGIAPYLEGQRVNRVIIRERRLRWPISDNLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E ++I HLGMSGS +IE AK +H+HV I L + + Y DP Sbjct: 61 LLRAEVG-TLINHLGMSGSLRLIESGLPAK-----RHDHVDIELESGLALR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + L+++ LR LGPEP ++F L ++ +K +++ +V G Sbjct: 110 RRFGALLWSQAPLEHEL--LRNLGPEPLTDAFAGQRLFELSRGRSVAVKPFIMDNTVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ A + P R ++ K +L EI+++L +AI+ GG++L D+ Sbjct: 168 VGNIYASEVLFTAGIDPRRSAGNI------SKTRYSRLAGEIKRILANAIECGGTTLCDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ VYG+ GE C CG +R I R++ YC +CQ+ Sbjct: 222 IGGDGQPGYFQQELFVYGRGGEFC-KACGGTLREIRLGQRTSVYCPHCQR 270 >gi|315633560|ref|ZP_07888850.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] gi|315477602|gb|EFU68344.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] Length = 274 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ T+ I + + LR+ A KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYTIEKIEVRQPKLRWAVSPEL-ATLHQVKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSG+ I C PI +H+H+ I L N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGTVRIVPHDC--PID--KHDHLDIVLNNGRLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEKLDEFHL--FLKLGPEPLSEEFNADYLFKKSRKKTTALKTLLMDNTVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 168 GNIYANESLFLCGLHPMKLAANLTRKQCE------RLVDTIKSVLAKAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I + R++FYC CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLTIGQRNSFYCPMCQK 269 >gi|254784434|ref|YP_003071862.1| formamidopyrimidine-DNA glycosylase [Teredinibacter turnerae T7901] gi|259647151|sp|C5BLG1|FPG_TERTT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|237685174|gb|ACR12438.1| DNA-formamidopyrimidine glycosylase [Teredinibacter turnerae T7901] Length = 272 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 158/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + +T + L LR+ S G+ ++ RR KYL Sbjct: 1 MPELPEVETTRRGIAPHILHHPITAVTLRHTQLRWPIDKALSRNLPGRTLVRADRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVI-YND 118 L+ ++ ++I HLGMSGS I +P + P +H+H+ + + RV+ Y+D Sbjct: 61 LLAVDDGRTLIWHLGMSGSLRI-----VEPTEPPGKHDHIDLRFAHG------RVLRYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG L Q+ + LGPEP + FN YL + K+++ +K+ +++ ++V Sbjct: 110 PRRFGAF-LATADDPAQHALICHLGPEPLTDDFNGEYLYERSRKRSTAVKSWIMDSRVVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ AK+ P+R L + ++L I+ VL +I GG++LRD Sbjct: 169 GVGNIYANESLFLAKIHPLRAAGKLT------RPACHRLADIIKAVLARSITQGGTTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V DG GYF +VYG+ GEPC C + + + R+T YCT+CQ Sbjct: 223 FVGGDGKPGYFAQQLNVYGRGGEPC-PVCAKPLTEKPLSQRTTVYCTHCQ 271 >gi|156502993|ref|YP_001429058.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253596|gb|ABU62102.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 274 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDNLS-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCYV-CNTKIQSLVIAQRNTFFCKKCQK 274 >gi|331005604|ref|ZP_08328974.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] gi|330420577|gb|EGG94873.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] Length = 272 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 159/290 (54%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + +K V+ + L LR+ KK++++ RR KYL Sbjct: 1 MPELPEVETTRQGITPHIKGKQVSAVILRHHQLRWPIDSQLVDYLTRKKLLNIHRRGKYL 60 Query: 61 LIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+E + G+L ++HLGMSGS I +T P K H+HV I + N + Y+DP Sbjct: 61 LLEFVHGHL--LIHLGMSGSLRIINTKTDAPQK---HDHVDIIFSGNIGLR-----YHDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L T + + +R LGPEP F YL K+ ++K +++ IV G Sbjct: 111 RRFGSI-LWTTEDPFNHKLIRKLGPEPLLEDFTGEYLFKASRKRKKDVKTFIMDSHIVVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + + P + L + D+ ++ I+ VL +I GG++LRD+ Sbjct: 170 VGNIYANESLFTSGIRPTKAAEKLTRKQC---DL---WVENIKAVLQRSITQGGTTLRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DG GYF +VYG+ GE C++ C +++ I QA R+T YC+ CQK Sbjct: 224 VGGDGKPGYFAQQLNVYGRGGEACVT-CRHILKEIRQAQRTTVYCSRCQK 272 >gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] gi|122449230|sp|Q1WUN7|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 152/296 (51%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ N + DI + + F K I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVNEESEFIEKLTNKTIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + +E ++ K ++ +H HV T+ T+ + YND R Sbjct: 61 LFRFSSDLTMISHLRMEGKYFVEPST--KEVE--KHTHVVFDFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+ Sbjct: 112 KFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQTIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID--------AIDAG 232 GNIY E LW +K+ P TP + KL +E KVL D A +AG Sbjct: 172 GNIYADEVLWMSKIHP-----------ETPAN---KLTEEEVKVLRDNIIKELALATEAG 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+++R Y G FQ + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 218 GTTIRSYTDAFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 272 >gi|323703152|ref|ZP_08114806.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] gi|323531929|gb|EGB21814.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] Length = 277 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKI-IDVSRRAK 58 MPELPEVE + R+L + +T+T + K +R P F+ GK++ + RR K Sbjct: 1 MPELPEVETVVRSLEKHLAGLTITAVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L L+++VHL M+G + + P++ +H HV L N + + D Sbjct: 61 YLLLHLSDGLTLVVHLRMTGRLV--YCDAETPVE--KHTHVIFHLDNGKQLR-----FTD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV TS + ++ LGPEP D SF +L + ++ + +K LL+Q +A Sbjct: 112 QRQFGRMQLVPTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLLLDQCFIA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA++ P R I ++ +P++I +L + I +V+ I G++ RD Sbjct: 172 GLGNIYADEALFRARVHPER-----IASDLSPREI-ARLHKAIVEVIAGGIKHRGTTFRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q VY + PC +CG+ I RI AGRS++YC CQK Sbjct: 226 YVDGEGRAGSYQQHLKVYNRENLPC-PHCGKPIARIKVAGRSSYYCPCCQK 275 >gi|325577757|ref|ZP_08148032.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] gi|325160502|gb|EGC72628.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] Length = 271 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 154/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + KI+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTTL-KNVKILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ H S PI +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPHDS---PID--KHDHLDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E+ + LGPEP + FNA YL + KK++ LK L++ +V G Sbjct: 109 RRFGAWLWTESLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANETLFLCGLHPMKLAENLTRKQCA------LLVKTIKDVLAKAITQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I ++ R++FYC +CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGTKIESMIIGQRNSFYCPHCQK 269 >gi|289624665|ref|ZP_06457619.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648505|ref|ZP_06479848.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485251|ref|ZP_07003344.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160239|gb|EFI01267.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330871123|gb|EGH05832.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330891348|gb|EGH24009.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. mori str. 301020] gi|330985919|gb|EGH84022.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011779|gb|EGH91835.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGVSRARYLKLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|212638360|ref|YP_002314880.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] gi|212559840|gb|ACJ32895.1| Formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] Length = 273 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L+ ++ T+ + +H K ++ F +G+ I ++ RR K+ Sbjct: 1 MPELPEVETVRLTLLPLVVGKTIERVKVHWPKIIQHPDVATFCERLKGQTIHNIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ ++ ++ HL M G +I E P QH H+ + T+ T + Y D Sbjct: 61 LLFQLD-DVVLVSHLRMEGRYIYEKEDA--PFD--QHTHIFFTFTDQTELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PPL ++G EP D F +LT Q + +K LL+Q IVAG Sbjct: 111 RKFGTMHLFSKGEELHVPPLSSIGVEPFDEQFTVAWLTDQLQRTKRTIKATLLDQTIVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R+ + P R +L T ++I L + I + + +AI+ GGS++R Y Sbjct: 171 LGNIYVDEVLFRSSIHPERTAATL-----TIREI-EALHEAIVQTIQEAIEKGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ G IG FQ VYG+ +PC CG+ I + A R T YC +CQ Sbjct: 225 VNTQGKIGKFQTQLYVYGRVNKPC-RRCGEPIVKTTVANRGTHYCKHCQ 272 >gi|328957054|ref|YP_004374440.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] gi|328673378|gb|AEB29424.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] Length = 278 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L ++ T+ + ++ + P F G+KI++ RR Sbjct: 1 MPELPEVETVRKGLEKLVSEATIESVDIYWDRI-ISGPIETTEFKRILMGEKIMEFDRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KY++I + +++ HL M G + +E +S P+K +H HV L + + + Y Sbjct: 60 KYIIIRFK-QWALVSHLRMEGKYEVEESSA--PLK--KHTHVVFHLADGRDLR-----YL 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M LV ++ ++ LGPEP +F+ K +K LL+QKIV Sbjct: 110 DVRKFGRMTLVPIGEEFTATGIKLLGPEPTVETFDEAIFYKTLQTKKRAIKPLLLDQKIV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+ AK+ P+R SL +N + L + I KVL DA++AGG+++R Sbjct: 170 AGLGNIYVDEALFLAKMHPLRTANSLQKNE------VSLLHEAIIKVLGDAVEAGGTTIR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G FQ SVYGK G PC+ CG I +I A R T +C CQ+ Sbjct: 224 TYQNALGEAGSFQVKLSVYGKKGLPCI-RCGTPIEKIKVAQRGTHFCPNCQR 274 >gi|222054672|ref|YP_002537034.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] gi|254789439|sp|B9M5V2|FPG_GEOSF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221563961|gb|ACM19933.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] Length = 271 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ + + LR P G+ I+ + RR KYL Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATKLRHPLPPELDRLLVGQLIVAMDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +G +II HLGM+G + S + +H+H+ + L + Y + + DPR Sbjct: 61 LLRCKGG-TIIFHLGMTGMLYLVKASSP----HGKHDHLDLVLDGS-----YILRFTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+P L GPEP + F+A YL + H++ +K +++ ++VAGI Sbjct: 111 RFGTIIWTDND-PLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSRVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA ++P L + KD+L L+ I+ VL DA++AG S++ + Sbjct: 170 GNIYANESLFRAGIAPQTSASDLSPD----KDLL--LVDAIKGVLTDAVEAGTSNIESAL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GYF FS+YGK G PC CG IR + GRSTF+C CQK Sbjct: 224 TGERPQGYFPYEFSIYGKKGRPC-PKCGSAIRMMRLGGRSTFFCPLCQK 271 >gi|238754767|ref|ZP_04616119.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] gi|238707075|gb|EEP99440.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] Length = 269 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 155/294 (52%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHNIQYAIVRNARLRWPVSDEILALS-DQLVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS I E T K H+HV + L+N + Y D Sbjct: 60 LLELPRGW-IIIHLGMSGSLRILPEETEAEK------HDHVDLVLSNGKILR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +S+ L LGPEP +F+A YL K + +K L++ Sbjct: 108 PRRFGAWLWASDLTTSSV------LAHLGPEPLSEAFSASYLFSLSRNKRTLIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A +SP R SL + P+ L L+ I++VL +I+ GG+ Sbjct: 162 KVVVGVGNIYASESLFVAGISPERPAGSLTE----PEAEL--LVTTIKRVLQRSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +LRD++ DG GYF VYG+ GEPC CG +I RSTF+C CQ Sbjct: 216 TLRDFLQSDGKPGYFAQELQVYGRAGEPC-RRCGHLIESARHGQRSTFFCRNCQ 268 >gi|258544390|ref|ZP_05704624.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] gi|258520349|gb|EEV89208.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] Length = 272 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 156/291 (53%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++N + I H LR G + + RR K+L Sbjct: 1 MPELPEVETTRRGIAPHLENHRIHSISAHIAKLRQPLDTAELNRISGHTLTRIERRGKHL 60 Query: 61 LIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + L++ +HLGMSG+ I T + P K +H+HV I+L N + +DP Sbjct: 61 ILHSDQPELALHIHLGMSGALRI--TPASSPHK--KHDHVAITLDNGDELR-----LHDP 111 Query: 120 RRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + L++ + PP L LG EP D++FN L Q K S +K ++NQ+ + Sbjct: 112 RRFGHVALIDPT----RPPASLANLGDEPLDDNFNGARLYAQTRGKKSAIKTHIMNQRYL 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ + + P R +L + + +L + I+ VL AI GG++LR Sbjct: 168 TGVGNIYATEALFASAIHPARAATTLTRAD------CDRLAEAIKTVLQAAIAQGGTTLR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ DG+ GYF + YG++GEPC C + ++ + GRST YC +CQ Sbjct: 222 DFTQPDGTHGYFAQTLNAYGRSGEPC-PRCQRPLQNMTIGGRSTVYCAHCQ 271 >gi|325290276|ref|YP_004266457.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] gi|324965677|gb|ADY56456.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] Length = 273 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 159/296 (53%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--------GKKIID 52 MPELPEVE IR +L KN+ +I K + +P F AT GKK+ Sbjct: 1 MPELPEVENIRLSLA---KNIIGQEI----KEFKLFWPDVFVNATDLDPNDLLIGKKVES 53 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + RR KYL I L G++++I+H M+G +I + +P K H H L N Sbjct: 54 LGRRGKYLFIHLAGSVTLILHFRMTGK-LIYYQGEHEPEK---HTHAVFYLENG------ 103 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 ++ ++D R+FG + LVET+L + P + LGPEP D F+ + K S +K+ALL Sbjct: 104 QIHHSDMRKFGRIQLVETALLGKVPAIAKLGPEPFDERFSIEVFGQRLSGKKSTIKSALL 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAGIGNIY EAL+ A + P R+T SL + + L IQ L I+AG Sbjct: 164 DQETVAGIGNIYADEALFMAGIRPERRTASLKISE------VILLYDAIQGALKAGIEAG 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+S RDY DG+ G FQ VYG+ G+ C CG ++ + AGR+T +C CQ Sbjct: 218 GTSFRDYRDGDGNKGLFQENLYVYGRAGQNC-KVCGSVLGKTKTAGRTTVFCPVCQ 272 >gi|330965061|gb|EGH65321.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++II VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIIQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSHDPHNHELLIRLGPEPLTDLFDGERLYQRSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|261418257|ref|YP_003251939.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|319767783|ref|YP_004133284.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] gi|261374714|gb|ACX77457.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|317112649|gb|ADU95141.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] Length = 274 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRPVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|157804064|ref|YP_001492613.1| formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] gi|166198742|sp|A8EZP5|FPG_RICCK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157785327|gb|ABV73828.1| Formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] Length = 273 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 160/291 (54%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + +I L R NLR++ + I++V RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIKNIELKRDNLRYNLSPLLTTEILNTNILNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ S+++HLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFGNYYSLVIHLGMSGRFTVQPAN----YKIQKHDHVIFDLNNCE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSL---KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + +T+ K+ Y LG EP + YL + + +KN +++ KI+ Sbjct: 112 RFGMVYSFKTNFLEEKFFY----NLGIEPLSDLLTLEYLKSKLITRTIAIKNLIMDNKII 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN+Y E+L A++ P + R+L D + LI+ I++VL AI AGG++L+ Sbjct: 168 VGVGNLYASESLHLARIHPHKLGRNL------KDDEIENLIKSIREVLTKAITAGGTTLK 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++V+ D GYF VYG+ G+ C NC I + +GRSTFYC CQ Sbjct: 222 NFVNGDSKPGYFTQQLRVYGREGQKCF-NCSSTILKTKNSGRSTFYCKTCQ 271 >gi|71737815|ref|YP_276892.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|90101310|sp|Q48CK1|FPG_PSE14 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71558368|gb|AAZ37579.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326361|gb|EFW82414.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. B076] gi|320331648|gb|EFW87586.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872371|gb|EGH06520.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 270 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|320539888|ref|ZP_08039547.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] gi|320030074|gb|EFW12094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] Length = 271 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 156/296 (52%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAIVRNARLRWPVSEQILTLS-AQPVHSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LIELE IIVHLGMSGS + E+ A +H+H+ + ++N + Y Sbjct: 60 LIELEHGW-IIVHLGMSGSLRMLRKENQDAAG-----KHDHIDLVISNGMILR-----YT 108 Query: 118 DPRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG DL +++ L LGPEP +FN YL + K LK L++ Sbjct: 109 DPRRFGAWLWCEDLAASNV------LVHLGPEPLSEAFNGTYLYKKSRNKRMRLKPWLMD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 K+V G+GNIY E+L+ A + P R+ SL N T D+L I+E VL +I+ GG Sbjct: 163 NKLVVGVGNIYASESLFSAGILPDRQADSL---NKTEADLLAATIKE---VLQRSIEQGG 216 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD++ DG GYF VYG+ GEPC + CG I RSTF+C +CQ+ Sbjct: 217 TTLRDFLQSDGKPGYFAQELQVYGRAGEPCRA-CGLPIESTKHGQRSTFFCCHCQR 271 >gi|237802341|ref|ZP_04590802.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025198|gb|EGI05254.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG ++R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGLPC-KVCGTLLREIKLGQRASVYCPKCQR 270 >gi|306836416|ref|ZP_07469393.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304567697|gb|EFM43285.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 156/301 (51%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR + +V K +T DI R N D P + GK+I V+RR K Sbjct: 1 MPELPEVESVRRGVESYVVGKEITSVDIAHPRANRGQDEP--LAGLVVGKEIAAVARRGK 58 Query: 59 YLLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +E G + +HLGMSG I HT + H +T+ L++ T Sbjct: 59 FMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHT-------DSPHRRITVVLSDATELH- 110 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTL---GPEPADNSFNAIYLTHQFHKKNSNLK 168 + D R FG+ + Y P T+ G +P + F+ + KK + +K Sbjct: 111 ----FVDQRTFGY---------WLYAPWSTISHIGLDPLEPDFDIASAARRLRKKKTAVK 157 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A Sbjct: 158 TALLDQTLVSGIGNIYADEALWTARISPRKKASALRQKDAV------ALLSAAQTVMSAA 211 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + AGG+S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +C Sbjct: 212 LKAGGTSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|156936197|ref|YP_001440113.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ATCC BAA-894] gi|166215624|sp|A7MQ97|FPG_ENTS8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156534451|gb|ABU79277.1| hypothetical protein ESA_04096 [Cronobacter sakazakii ATCC BAA-894] Length = 269 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 152/291 (52%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHALS-DKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS I P + P +H+HV + ++N + Y D Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI------LPEERPAEKHDHVDLVMSNGKVLR-----YTD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + T + L LGPEP ++FN YL + KK +K L++ K+V Sbjct: 108 PRRFGAW--LWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNKLVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD Sbjct: 166 GVGNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 220 FLQSDGKPGYFAQELQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|33151884|ref|NP_873237.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] gi|39931237|sp|Q7VN67|FPG_HAEDU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33148105|gb|AAP95626.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] Length = 274 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 153/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + LR+ A + G KI+ +SRRAKYL Sbjct: 1 MPELPEVETCLRGIEPYLAGQTIQQIVIRTPKLRWPISAELCAMS-GAKILALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E I+VHLGMSGS + ++S +P K +H+HV + + YNDPR Sbjct: 60 IIHTERG-DILVHLGMSGSLTLLNSS--QPTKASKHDHVDLITEAGIILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + + YP + LGPEP ++F + YL + K +KN ++N IV G+ Sbjct: 112 KFGAWLWAKQA--ENYPLITKLGPEPLSDTFTSDYLFKKSRNKTVAVKNFIMNNDIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P L N T K + +L IQ VL AI GG++L+D+ Sbjct: 170 GNIYASESLFMAGVHP-----ELAAQNLTEKQCV-QLRNVIQAVLTKAIIQGGTTLKDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I+ V R++++C CQ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEEC-RECGTLIQAKVIGQRNSYFCPDCQ 270 >gi|302188125|ref|ZP_07264798.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + FN L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFNGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGVSRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|88606811|ref|YP_505015.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] gi|88597874|gb|ABD43344.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] Length = 268 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 161/289 (55%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R+L + + D+ + R++LR F G++I V R AKYL Sbjct: 1 MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVRIADDFEQLVTGREICSVYRVAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+ ++ H+GMSG + H P+ +H+ V ++ + Y +++ND R Sbjct: 61 VMQLDSGAKLVFHMGMSGRILYMHA----PVPE-KHDCVVFAMQHG-----YSLVFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L++ Y+ L +GP+P +FNA L + K + +K+ L+N +V GI Sbjct: 111 RFGLVTLLDGE-GYR-SLLEKMGPDPFSEAFNADCLLNMHGK--ARIKSVLMNSAVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R+ +L ++ ++++ ++VL AI GGSS+RDY Sbjct: 167 GNIYASEILFTAAILPHREVSTL------SREECCRIVESTREVLKLAIATGGSSIRDYR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +G F F VYG+ GE C + CG I+ Q GRSTF+C +CQK Sbjct: 221 TPTGDVGNFSKHFRVYGRKGEKCYT-CGGEIQVEKQGGRSTFFCRHCQK 268 >gi|284008829|emb|CBA75606.1| formamidopyrimidine-DNA glycosylase [Arsenophonus nasoniae] Length = 269 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 155/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNKIQYSIVRNSQLRWPVATEI-LHIANESVLSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ II+HLGMSGS I AK +H+H+ + L + + Y DPR Sbjct: 60 LIQLQHGW-IIIHLGMSGSIRI----LAKEQLAEKHDHIDLVLADGKTLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ P L LGPEP FNA YL + K + +K L++ KIV G+ Sbjct: 110 RFGAW--LWTNDLDNCPVLFHLGPEPLSTDFNADYLYQRAKNKKTAIKPWLMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK+ P R SL T K+I L+ +I+++L +I GG +L+D++ Sbjct: 168 GNIYANEALFAAKILPTRAAHSL-----TRKEI-DNLVIQIKQILQCSIKQGGITLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C S+CGQ+I I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQQLFVYGKKGEAC-SHCGQLIESIKLGQRSTFFCYNCQK 269 >gi|262273493|ref|ZP_06051307.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] gi|262222471|gb|EEY73782.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] Length = 269 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 152/292 (52%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + K+ VT + + + LR+ P G+ I V RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHAKDQVVTKLEVRQPKLRWPVPDTLFN-IEGQTIRAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YN 117 ++E + ++ VHLGMSGS + E T K H+HV + L+N +VI YN Sbjct: 60 ILETDIGYAL-VHLGMSGSLRVLPEATPAGK------HDHVDLHLSNG------KVIRYN 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG E +P L LGPEP + F YL + K + +K +++ +V Sbjct: 107 DPRRFGAWLWQEKG--DDHPVLEKLGPEPLTDDFTGDYLLEKAKGKRTAIKPFIMDNAVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ +K+ P R L L+ EI+ VL AI GG++L+ Sbjct: 165 VGVGNIYANESLFTSKIHPTRSAGQLTHEEAQ------TLVAEIKAVLAMAIRQGGTTLK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG GYF VYGK G+PC CG+++ + R+T +C CQK Sbjct: 219 DFTQADGKPGYFAQELRVYGKQGKPC-PVCGEVLESVKIGQRNTVFCPACQK 269 >gi|328675725|gb|AEB28400.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida 3523] Length = 274 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 158/289 (54%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKNIIDKKILDIEINTDKLRYAIDKDQLVKIKNKIVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +E +L +I+HLGMSG + ++ IK H+H+ + L++N ++YNDPR Sbjct: 61 IVVIEDDLQLIIHLGMSGVIKVIDSTNYNKIK---HDHIVLILSDNLT-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLLSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + PIR + ++ + KL+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPIRASNTITKKEAE------KLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V R+TF+C CQK Sbjct: 227 NTEGKPGYFAQQLNVYGRVNQQCYV-CNTRIESLVIGQRNTFFCKKCQK 274 >gi|300811969|ref|ZP_07092427.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497048|gb|EFK32112.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 274 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P L N KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINP------LTPANELTKDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEGFVKIKISGRGTTYCLHCQK 272 >gi|313680246|ref|YP_004057985.1| DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] gi|313152961|gb|ADR36812.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] Length = 265 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 150/293 (51%), Gaps = 33/293 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEVE +RR L V+ + L D P ++AA G+++ + RR K Sbjct: 1 MPELPEVETVRRMLAPVVTGRRLL-------GLEHDDPARYAAAEAAVGRRVHALRRRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ L G L ++VHLGMSGS ++ + H + T V +ND Sbjct: 54 YLIFALTGGLELVVHLGMSGSLRLDEGT---------HTRARLEFEGVT------VFFND 98 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + V P L +GPEP F A + + LK ALL+Q+ VA Sbjct: 99 PRRFGKLRAVPAGDYRVLPTLARMGPEPLTRGFTARAFAARLARTARPLKPALLSQEPVA 158 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW+A+L P R +L D + +L + ++ VL A++ GGS+L D Sbjct: 159 GLGNIYADEALWKARLHPARPANALA------PDEVRRLHRAVRAVLRRAVERGGSTLGD 212 Query: 239 --YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ +VYG+ GE C CG+ I R+V GRST C CQ+ Sbjct: 213 GAYTRPDGEPGYFQIEHAVYGRAGEAC-PRCGRTIERLVLGGRSTHVCPRCQR 264 >gi|317494722|ref|ZP_07953134.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917324|gb|EFV38671.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 269 Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 155/295 (52%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + + + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELLRLS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS I P P +H+HV + L++ + Y D Sbjct: 60 LIELADGW-IIVHLGMSGSVRI------LPADEPPQKHDHVDMILSSGMMLR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +++ L LGPEP + FN YL + K + +K L++ Sbjct: 108 PRRFGAWLWCKDLDSSNV------LAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A++SP R L Q + L+ I+ VL+ +I+ GG+ Sbjct: 162 KVVVGVGNIYASESLFTARISPDRPAGDLTQADAE------VLVATIKAVLLRSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +L+D++ DG GYF VYG+ GE C CG+ I R+TF+C CQK Sbjct: 216 TLKDFLQSDGKPGYFAQELQVYGRAGEAC-RVCGEKILSGKHGQRTTFFCPRCQK 269 >gi|330874684|gb|EGH08833.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSHDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|15603010|ref|NP_246082.1| formamidopyrimidine-DNA glycosylase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431514|sp|P57910|FPG_PASMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12721492|gb|AAK03229.1| Fpg [Pasteurella multocida subsp. multocida str. Pm70] Length = 270 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ + T+ +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQ-QKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I+LE +I HLGMSGS ++E +H+H+ I + N + YNDP Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID-----KHDHLDIVVNNGKVVR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T ++P LGPEP F++ YL + KK + LK L++ +V G Sbjct: 109 RRFGAW--LWTEKLDEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ L P + SL K +L+++I++VL +AI GG++L+D+ Sbjct: 167 VGNIYANETLFLCNLHPQKTAGSLT------KAQCGQLVEQIKQVLSNAIQQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 221 LQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|104774357|ref|YP_619337.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983913|sp|Q1G9A3|FPG_LACDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|103423438|emb|CAI98311.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 273 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P L N KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINP------LTPANELTKDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|261823580|ref|YP_003261686.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] gi|261607593|gb|ACX90079.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] Length = 269 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 158/294 (53%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTIFYAEVRNSRLRWPVSAEILSLS-DEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL G IIVHLGMSGS + E+T K H+HV + + + + Y D Sbjct: 60 LIELTGGW-IIVHLGMSGSLRVLPEYTEPEK------HDHVDLVMDSGKVLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D +ET L LGPEP + F++ YL K + +K +++ K Sbjct: 108 PRRFGAWLWTDNLETC-----SVLAHLGPEPLEAEFSSDYLYQASRNKKTAIKQWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL +++ T L++ I++VL +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGIHPDRAAGSLNESDAT------VLVRVIKQVLQLSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG++GEPC CG I RSTF+C CQK Sbjct: 217 LRDFLQSDGKPGYFAQELRVYGRSGEPC-RTCGTPIETAKHGQRSTFFCRCCQK 269 >gi|117620578|ref|YP_854697.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166215607|sp|A0KEN2|FPG_AERHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117561985|gb|ABK38933.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 270 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 162/294 (55%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID-----VSR 55 MPELPEVE+ R+ + + + VT + + LR+ P ++++D VSR Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEI------QELVDLTIHRVSR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 RAKYLL+E + +I+ HLGMSGS + P + +H+HV I L N K R+ Sbjct: 55 RAKYLLLETDFGTAIL-HLGMSGSLRV--LDIGTPAE--KHDHVDIELANG---KLLRL- 105 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 NDPRRFG + L + L LGPEP ++FNA YL + +++ +K L++ + Sbjct: 106 -NDPRRFGAL-LWTREPAEAHALLAKLGPEPLTDAFNADYLRERAKGRSTAIKTFLMDNQ 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY EAL+ A + P R ++ L L+ EI++VL +AI GG++ Sbjct: 164 VVVGVGNIYANEALYAAGIHPKRAAGNISAER------LGTLVAEIKRVLAEAIRQGGTT 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D+ DG GYF VYG+ G+PC +C ++ I R+T +C++CQ+ Sbjct: 218 LKDFTSADGKPGYFVQQLQVYGRGGQPCF-HCHTLLSEIRLGQRTTVFCSHCQR 270 >gi|238798815|ref|ZP_04642284.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] gi|238717323|gb|EEQ09170.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] Length = 269 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 154/294 (52%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL IIVHLGMSGS + E T+ K H+HV + ++N + Y D Sbjct: 60 LLELPTGW-IIVHLGMSGSLRVLPEETAAEK------HDHVDLVISNGKILR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL +S+ L LGPEP + F+ YL + K + +K L++ Sbjct: 108 PRRFGAWLWAKDLETSSV------LAHLGPEPLSDEFSPQYLFDKSRHKRTLIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG+ Sbjct: 162 KVVVGVGNIYASESLFAAGILPERAAGSLTQAE------ISLLVTTIKAVLLHSIEQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +LRD++ DG GYF VYG+ GE C CGQ I RSTF+C +CQ Sbjct: 216 TLRDFLQSDGKPGYFAQELQVYGRAGELC-RRCGQRIEIAKHGQRSTFFCRHCQ 268 >gi|269965915|ref|ZP_06180008.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] gi|269829468|gb|EEZ83709.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] Length = 269 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + P K H+HV + L++ + YNDPR Sbjct: 60 LIETNKG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLSSGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFG--AWLWCAPGESHAVLANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLI-QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L+++++ P R L Q G L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQEWGL-------LVENIKMTLEIAITQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 221 AQADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|254229482|ref|ZP_04922897.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262392591|ref|YP_003284445.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|151938053|gb|EDN56896.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262336185|gb|ACY49980.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] Length = 269 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPIELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + P K H+HV + L++ + YNDPR Sbjct: 60 LIETNTG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLSSGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFG--AWLWCAPGESHAVLANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQE------WGGLVENIKMTLEIAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|326793829|ref|YP_004311649.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] gi|326544593|gb|ADZ89813.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] Length = 271 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 157/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N T+ + + + LR+ P +A + G+K+ VSRR KY+ Sbjct: 1 MPELPEVETTKRGIEPNIVNKTIQQVVIRQPKLRWPIPDAVNALS-GQKVESVSRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++I+HLGMSGS H+HV I +++ +Y DPR Sbjct: 60 GVHTKAG-TLIIHLGMSGSLYFVDAGTPPLF----HDHVDIEFSDSPIVMRY----TDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + ++ L++LGPEP ++F+A YL + + +K +++ K+V G+ Sbjct: 111 RFGAM-LWQPGDWLEHELLKSLGPEPLTDAFHADYLYERAQGRKQAIKMFIMDSKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + + L + I++VL AI+ GG++L+D+V Sbjct: 170 GNIYANEALFKAGIHPKRAAGKISRAR------LEAFVASIKEVLSAAIEQGGTTLKDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VYG+ GE C+S C + I RST YC CQ Sbjct: 224 GGDGKPGYFKQELAVYGRGGEKCIS-CSNELSEIRLGQRSTVYCNNCQ 270 >gi|269959363|ref|ZP_06173746.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] gi|269835800|gb|EEZ89876.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] Length = 269 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + P K H+HV + L+N + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDADFP-PAK---HDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFG--AWLWSAPNEPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG+ ++ R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGETC-PECGEALQEQKIGQRNTFFCNVCQQ 269 >gi|304310176|ref|YP_003809774.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] gi|301795909|emb|CBL44110.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] Length = 270 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR ++ ++ + V + + + LR+ P A G+ + D++RR KY Sbjct: 1 MPELPEVETTRRGILPHIQGLRVQQVIVRQPKLRWPVSPELVQLA--GEPLRDIARRGKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL + + ++ HLGMSGS I + KP H+H+ N + Y+DP Sbjct: 59 LLFSFDRGI-VLAHLGMSGSLRILESE--KPADA--HDHLDWVFENGITLR-----YHDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L +P L +LGPEP + F A YL + +K+ ++N +V G Sbjct: 109 RRFGAW-LWWDGESTGHPLLESLGPEPLEPDFTAQYLYRTSRGRKVPVKSFVMNSHVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A +SP+R + +L++ I+K+L D+I GG++LRD+ Sbjct: 168 VGNIYANEALFSAGISPLRAAGRISLER------YQRLVESIRKILEDSIRQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V DG GYFQ VYG+ G PCL CG+ + I R+T +C CQ Sbjct: 222 VGGDGKPGYFQQTLQVYGRAGAPCL-KCGESLCEIRLGQRTTVFCKVCQ 269 >gi|297583658|ref|YP_003699438.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] gi|297142115|gb|ADH98872.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] Length = 286 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 150/291 (51%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ D+ + + D F+ G+ I + R+ K Sbjct: 1 MPELPEVETVRQTLTELLIGRTIEDVWVGWPAMIKEPDDVERFALMLTGQTIQSIGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + L+ + ++ HL M G + ++ + +H HV I T+ T + Y D Sbjct: 61 FLKLYLD-DCVLVSHLRMEGKYALKEAGSERS----KHTHVVIRFTDGTA-----LHYAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEP-ADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M + Q PPL +GPEP + A L + K +K ALL+Q +V Sbjct: 111 VRKFGTMHAFVKGTEEQRPPLSKVGPEPVGKDRITADELGTRLKKTTRAVKAALLDQSLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA + P +L P ++ L+ I L +AID GG+S+R Sbjct: 171 AGLGNIYVDEALFRAGIHPAVPAHTL------PDKLIPVLLSAISDTLQEAIDQGGTSIR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +GYFQ VYG+TGEPC CG I R V GR T C CQ Sbjct: 225 SYVNGKGEMGYFQQQLFVYGRTGEPC-RKCGTPISRSVVGGRGTHTCEVCQ 274 >gi|83595877|gb|ABC25239.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium Ant4D3] Length = 270 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +M ++ + + + LR+ P +A GK + V RR KYL Sbjct: 1 MPELPEVETTRAGIMPHIQGQILQHVVVRDTRLRWPVPIDLAAKVEGKCLRQVVRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E + +II HLGM+GS I+ H K P H + L + T +YR DP Sbjct: 61 LFEFDHG-AIIGHLGMTGSMRIVVH-------KEPPAYHDHVDLVFSEVTLRYR----DP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L + + ++P L +LGPEP + F+ ++L K +K+ +++ K V G Sbjct: 109 RRFGCV-LWQDNPVMEHPLLASLGPEPLSDEFDMVHLLQVCKGKKQAIKSVIMDAKQVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R+ + L KL++ ++VL AI+ GG++LRD+ Sbjct: 168 VGNIYANEALFMAGIHPHRQAGRISAAR------LGKLVESCKQVLCAAIEQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G GYF+ VYG+ G+ C+ NC Q + RST YC +CQ+ Sbjct: 222 VDSEGKPGYFKQQLQVYGRAGQACV-NCDQALTESRIGQRSTVYCKHCQR 270 >gi|145638327|ref|ZP_01793937.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272656|gb|EDK12563.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751473|gb|ADO81457.1| Formamidopyrimidine-DNA-glycosylase 2 [Haemophilus influenzae R2866] Length = 270 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ + T+ +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQ-QKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I+LE +I HLGMSGS ++E +H+H+ I + N + YNDP Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID-----KHDHLDIVVNNGKVVR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T ++P LGPEP F++ YL + KK + LK L++ +V G Sbjct: 109 RRFGAW--LWTEKLNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ L P + SL K +L+++I++VL +AI GG++L+D+ Sbjct: 167 VGNIYANETLFLCNLHPQKTAGSLT------KAQCGQLVEQIKQVLSNAIQQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 221 LQPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|253991835|ref|YP_003043191.1| formamidopyrimidine-DNA glycosylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783285|emb|CAQ86450.1| formamidopyrimidine DNA glycosylase [Photorhabdus asymbiotica] Length = 269 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 113/295 (38%), Positives = 157/295 (53%), Gaps = 34/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMTLS-DRLVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 LIEL EG II+HLGMSGS I P + P +H+HV + + + + Y Sbjct: 60 LIELAEG--WIIIHLGMSGSLRI------LPEERPAEKHDHVDLVMADGKVLR-----YT 106 Query: 118 DPRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG DL + S+ L LGPEP + FN YL + K + +K L++ Sbjct: 107 DPRRFGAWLWSNDLNQCSV------LTHLGPEPLSDDFNGAYLYARSRNKKTLIKPWLMD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 K+V G+GNIY EAL+ A + P R +L + +Y L++ I+KVL +I+ GG Sbjct: 161 NKLVVGVGNIYANEALFTAHIQPERPAHTLAERE------VYLLVETIKKVLQRSIEQGG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++LRD++ DG GYF VYG+TGEPC CG I I RSTF+C +CQ Sbjct: 215 TTLRDFLQSDGKPGYFAQELFVYGRTGEPC-RICGGNIASIKLGQRSTFFCCHCQ 268 >gi|212637669|ref|YP_002314194.1| formamidopyrimidine-DNA glycosylase [Shewanella piezotolerans WP3] gi|226706486|sp|B8CVD1|FPG_SHEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|212559153|gb|ACJ31607.1| Formamidopyrimidine-DNA glycolase [Shewanella piezotolerans WP3] Length = 271 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ ++ + + + VTD+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTKQGVSPYLIDNRVTDLIIRNPSLRWPVPD-IAKQIIGQTIRAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LI+ + + IVHLGMSGS I PI +P +H+H+ + L + + YND Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRI------LPINSPVEKHDHIDLVLASGKILR-----YND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP +++FN+ YL K +K L++ IV Sbjct: 108 PRRFGAWLWNELP-EQAHPLLAKLGPEPLESAFNSSYLLSALANKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P + + + L+ E++++L AI GG++L+D Sbjct: 167 GVGNIYANEALFAAGIHP------QAEAGKVDAERISILVAEVKQILARAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + +G GYF VYG+ G+ C ++CGQ++ I R+T +C+ CQ+ Sbjct: 221 FTNAEGKPGYFAQKLHVYGRGGDTC-THCGQLLSEIRLGQRATVFCSICQQ 270 >gi|313124191|ref|YP_004034450.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280754|gb|ADQ61473.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 273 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSQINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|157693308|ref|YP_001487770.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus SAFR-032] gi|157682066|gb|ABV63210.1| DNA-formamidopyrimidine glycosylase [Bacillus pumilus SAFR-032] Length = 276 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 155/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P +H HV + T+ T + Y+D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYRVH--EAHEPYD--KHVHVVFTFTDGTELR-----YHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L + +L+K I + +V A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLSLESC---KVLHKQIIDTLQV---AVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPC-QTCGSIIEKTVVGGRGTHFCVTCQK 274 >gi|54307427|ref|YP_128447.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] gi|81697553|sp|Q6LVN0|FPG_PHOPR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46911847|emb|CAG18645.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] Length = 269 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M TVT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEIQQ-IEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +I VHLGMSGS I S I +H+HV + L++ + YNDPR Sbjct: 60 LLHTDVGYAI-VHLGMSGSLRILPAS----IPPEKHDHVDLVLSSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L ++ L LGPEP N F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGAWLWGLPDLDHKV--LSQLGPEPLSNDFTAEYLQERAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + +P+ I + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEI-----SPEKIAL-FVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|261314782|ref|ZP_05953979.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] gi|261303808|gb|EEY07305.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] Length = 215 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 118/199 (59%), Gaps = 9/199 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L + Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMR-PDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWR 191 +Q+++AG+GNIYVCEALWR Sbjct: 180 DQRLIAGLGNIYVCEALWR 198 >gi|83590674|ref|YP_430683.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] gi|123524146|sp|Q2RHE9|FPG_MOOTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83573588|gb|ABC20140.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] Length = 274 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L ++ + + H + P FS G+ I + RR KY Sbjct: 1 MPELPEVETIKRTLTPCLREQKIARVEVYHPGVIAAPDPETFSRLLAGRIITGLDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L G ++VHL M+G + T A P+ H HV SL + + + D Sbjct: 61 LLVHLSGEYCLVVHLRMTGRLVF--TEGAAPLAP--HTHVVFSLAGGPSLR-----FVDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L + P LR LGPEP D +F+A+ L + +K LL+Q++VAG Sbjct: 112 RRFGRLYLAAKAEVETLPGLRDLGPEPLDPAFDALALAAILAGRRRPIKQVLLDQRLVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A + P R SL + +L +Q+VL I G+S+RDY Sbjct: 172 IGNIYADEMLFAAGIDPRRPAASLNHEE------VARLRGAMQRVLEQGIANRGTSIRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G Q VYG+TG PC CGQ + R+ GRST +C CQ Sbjct: 226 VDGSGRQGSNQEHLQVYGRTGRPC-PRCGQPLERVRLGGRSTHFCPRCQ 273 >gi|198284465|ref|YP_002220786.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665209|ref|YP_002427132.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226704425|sp|B7J8I7|FPG_ACIF2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689974|sp|B5ENT6|FPG_ACIF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198248986|gb|ACH84579.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517422|gb|ACK78008.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 270 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 165/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ + + LR +A G++++++ RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLRGRRLEGAVVRDSRLRLPVNDDLAARVSGQRLLNLRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++LE +I++HLGMSG + S P++ +H+HV + ++ + ++DPR Sbjct: 61 LLDLERG-TILIHLGMSGHLRVLPQSA--PVQ--KHDHVDLLFADDLCLR-----FHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + +P L+ LGPEP + F A YL + + +K+ L++ IV G+ Sbjct: 111 RFGAVLWLDDA--DHHPLLQHLGPEPLGDVFGAEYLYQRGRNRQIPVKSFLMDAHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + P+ + KL+Q ++ VL AI GG++LRD+ Sbjct: 169 GNIYANESLFAAGIDPRRPAGRI----ALPRYM--KLVQAVRTVLEAAIAQGGTTLRDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ + +VYG+ GEPC ++CG ++ + GR+T YC+ CQ+ Sbjct: 223 RPDGGNGYFRLSLAVYGREGEPC-THCGAPLQGVRIGGRATIYCSQCQR 270 >gi|242277525|ref|YP_002989654.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] gi|259647331|sp|C6BUX8|FPG_DESAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|242120419|gb|ACS78115.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] Length = 274 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 157/290 (54%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+I R L ++ T+ + L+ +++ + + FS+ G+KI + RRAK Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSVKMPW-YLFSSRVAGEKITRIHRRAKL 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+++L +L I HL M+G ++ H P H + LT+ + + ++D Sbjct: 60 LIMDLGDDLHITFHLKMTGR-VLAHEG---PTTPEPHTRIVFGLTDGGS-----IEFHDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + ++ + LGPEP + A L + + + +K LLNQ +VAG Sbjct: 111 RKFGEVRALNNEELQEWDFYKNLGPEPLE--VTAEELAERITGRKAQIKGLLLNQSVVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L+R+ + P K L + L KL E+Q VL AI GSS+RDY Sbjct: 169 CGNIYADESLFRSGIHPKAKASDLSNES------LVKLFTELQAVLKQAIQENGSSIRDY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V G G FQN+F VYGK GEPC +CG++ AGR++ +C+ CQK Sbjct: 223 VDAGGDAGGFQNSFKVYGKKGEPC-PDCGKIFEGATVAGRTSTFCSNCQK 271 >gi|260599932|ref|YP_003212503.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cronobacter turicensis z3032] gi|260219109|emb|CBA34464.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis z3032] Length = 269 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 152/291 (52%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHALS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS I P + P +H+HV + ++N + Y D Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI------LPEERPAEKHDHVDLVMSNGKVLR-----YTD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + T + L LGPEP ++FN YL + KK +K L++ K+V Sbjct: 108 PRRFGAW--LWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNKLVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD Sbjct: 166 GVGNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 220 FLQSDGKPGYFAQQLQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|315178473|gb|ADT85387.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii NCTC 11218] Length = 267 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/267 (37%), Positives = 141/267 (52%), Gaps = 20/267 (7%) Query: 22 TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFI 81 TV + LR+D P G+ I +SRRAKYL+IE S IVHLGMSGS Sbjct: 11 TVRSLTFRTPKLRWDIPAELKQ-MEGQVITAISRRAKYLMIETSVG-SAIVHLGMSGSLR 68 Query: 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT 141 + +H+HV ++LTN + YNDPRRFG ++ L Sbjct: 69 VLDGD----FPPAKHDHVDLTLTNGKVLR-----YNDPRRFGAWLWCPAGEHHEV--LGH 117 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 +GPEP + FNA YL H+ KK +K+ +++ KIV G+GNIY E+L+ A + P+R Sbjct: 118 MGPEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGVGNIYANESLFSAHIHPLRPAH 177 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 SL + T L+ +I+ VL AI GG++L+D+ DG GYF VYGK G+ Sbjct: 178 SLSEAEWT------SLVADIKAVLTTAIAQGGTTLKDFAQADGKPGYFAQELQVYGKKGQ 231 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG+ I + R++F+C CQ Sbjct: 232 PC-PRCGEPIAELKIGQRNSFFCLQCQ 257 >gi|309805278|ref|ZP_07699330.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|312871811|ref|ZP_07731899.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|329920100|ref|ZP_08276931.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] gi|308165512|gb|EFO67743.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|311092753|gb|EFQ51109.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|328936554|gb|EGG32998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] Length = 276 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|23099617|ref|NP_693083.1| formamidopyrimidine-DNA glycosylase [Oceanobacillus iheyensis HTE831] gi|29611715|sp|Q8EPE6|FPG_OCEIH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22777847|dbj|BAC14118.1| formamidopyrimidine-DNA glycosidase [Oceanobacillus iheyensis HTE831] Length = 280 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+ L + + N T+ I + N+ D F A G+ I + R+ K Sbjct: 1 MPELPEVETIKETLKLFVCNKTIKHIDIEWPNMIKHPDDVEEFKALVTGQTIRSMGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ +I HL M G + + S P+K +H HVT +N + YND Sbjct: 61 FLLFYLD-EYVLISHLRMEGKYSVH--SPGDPVK--KHTHVTFYFSNGEELR-----YND 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + ++ + PL LGP+P D SFN Y + + + +K ALL+Q IV Sbjct: 111 VRKFGTMHVYPIGEEFMHKPLNQLGPDPFDTSFNLEYFYEKLKRTDRYIKTALLDQSIVT 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P+++ L K + KL ++ L DAI AGG+++R Sbjct: 171 GLGNIYVDETLFRANVHPLKRCSKL------SKQEVKKLQINAKETLRDAIKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ +PC CG I +I GR T C CQ Sbjct: 225 YVNTQGDMGMFQQDLYVYGQHSKPC-RVCGADIIKIKVGGRGTHLCPTCQ 273 >gi|259500514|ref|ZP_05743416.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|302191204|ref|ZP_07267458.1| formamidopyrimidine-DNA glycosylase [Lactobacillus iners AB-1] gi|309808040|ref|ZP_07701959.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|312875632|ref|ZP_07735633.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325912596|ref|ZP_08174979.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] gi|259167898|gb|EEW52393.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|308168723|gb|EFO70822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|311088886|gb|EFQ47329.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325478017|gb|EGC81146.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] Length = 276 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|70733155|ref|YP_262928.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] gi|90101311|sp|Q4K4A5|FPG_PSEF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68347454|gb|AAY95060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] Length = 270 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQKVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----LPAAKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDPLNHEL--LVRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAK------GISRARYLKLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ YC CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGENC-KVCGTGLREIKLGQRASVYCPRCQ 269 >gi|157149253|ref|YP_001456571.1| formamidopyrimidine-DNA glycosylase [Citrobacter koseri ATCC BAA-895] gi|166215620|sp|A8ARM2|FPG_CITK8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157086458|gb|ABV16136.1| hypothetical protein CKO_05093 [Citrobacter koseri ATCC BAA-895] Length = 269 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHANVRNGRLRWPVSEEIYRLS-DKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGAYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q ++L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQ---VECELLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVAAKHAQRATFYCRQCQK 269 >gi|194017136|ref|ZP_03055748.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] gi|194011004|gb|EDW20574.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] Length = 277 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 155/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRLVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +P +H HV + T+ T + Y+D Sbjct: 61 FLLFHLD-HYVMVSHLRMEGKYRVH--EAHEPYD--KHVHVVFTFTDGTELR-----YHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEERELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L + +L+K I + +V A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLSLESC---KVLHKQIIDTLQV---AVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPC-QTCGSIIEKTVVGGRGTHFCVTCQK 274 >gi|237654279|ref|YP_002890593.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] gi|237625526|gb|ACR02216.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] Length = 272 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +++ + + LR P A G ++ V RRAKYL Sbjct: 1 MPELPEVETTCRGIRPHVQGRSLSRLVVRNPRLRVAVPADLPAHIEGARLEAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++IVHLGMSGS + + A+P H+HV + DPR Sbjct: 61 LLRFPAG-TVIVHLGMSGSLRV--VAAAEPAG--AHDHVDFVFGECA------LRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + +P L LGPEP + F+A +L + +K+ L++ + + G+ Sbjct: 110 RFG-MVVWQPGDVAAHPLLAGLGPEPLGDGFDADWLLRITRGLRAPIKHVLMDSRKLVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ L +L+ +++ L AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLEPAGRLGPRR------CARLVDCVRETLAAAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ GE C CG +RRIV A R++F+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFVYGRDGESC-RVCGTPVRRIVSAQRASFFCPRCQR 270 >gi|127514618|ref|YP_001095815.1| formamidopyrimidine-DNA glycosylase [Shewanella loihica PV-4] gi|166198750|sp|A3QJA8|FPG_SHELP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126639913|gb|ABO25556.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella loihica PV-4] Length = 271 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I + RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLLDQQVTGLTVRNASLRWPVPE-VAQQIVGQTIRGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + + IVHLGMSGS I S P++ +H+H+ + L + + +NDPR Sbjct: 60 LLDTDAG-TTIVHLGMSGSLRILPKST--PVE--KHDHIDLELASGKVLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EAAHPLLAKLGPEPLQSGFNVDYLAKALEGKKKAVKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + ++ L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRI------DRERLTVLVAEVKQILAQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|262200032|ref|YP_003271241.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] gi|262083379|gb|ACY19348.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] Length = 282 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/294 (36%), Positives = 149/294 (50%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L V+ V + LR + P + G+ + D+ R Sbjct: 1 MPELPEVETVRRTLAPVL-GQRVEAMWTSGLPLRLNRPVPEELLREISLGRTVEDIRRWG 59 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYLL++L G S++VHLGMSG + A + P H HV L+ + R Y Sbjct: 60 KYLLLDLAGAGHSVLVHLGMSGRLRM----MAAAGERPPHTHVAWLLSGGAPPAELR--Y 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +DPRRFG +D+VE + +P L LG +P + L + ++K LL+Q Sbjct: 114 SDPRRFGVIDVVERGNERAHPSLARLGEDPLTGALTGALLHAGSRRVRRSIKTFLLDQHT 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EALW+A++ P L K L I +V A++ GG+SL Sbjct: 174 VAGVGNIYASEALWQARILPTMPAERLS------KARADALAAAIHEVFARALEHGGTSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V+ DG G + VY + GEPC C +IRR V RSTF+C CQ+ Sbjct: 228 RDFVNADGHAGEHAHYLWVYERDGEPCPRPTCPGIIRRTVLQARSTFHCPRCQR 281 >gi|48474237|sp|Q8VW76|FPG_PASPI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16904663|dbj|BAB71962.1| formamidopyrimidine-DNA glycosylase homolog [Photobacterium damselae subsp. piscicida] Length = 269 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S IVHLGMSGS + A +H+HV ++L++ + YNDPR Sbjct: 60 LLDTPVG-SAIVHLGMSGSLRVLPAGTAPE----KHDHVDLALSSGEILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP + F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDVFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + TP+ L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEV-----TPQ-ALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC+ CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCSQCQQ 269 >gi|327482703|gb|AEA86013.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPYLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + A P +H HV I L + + Y DPR Sbjct: 61 LIRAESG-TLIVHLGMSGSLRL--VDAASPAA--KHEHVDILLESGQALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + L + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSDEPLAHVL--LASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRAR------YLKLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C NCG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFC-RNCGGTLREIRLGQRASVYCGRCQR 270 >gi|56476195|ref|YP_157784.1| formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] gi|81677551|sp|Q5P728|FPG_AZOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56312238|emb|CAI06883.1| Formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] Length = 271 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R + ++ T+T + + LR P + G+++ V RRAKYL Sbjct: 1 MPELPEVEITCRGIRPLVAGRTLTALEVRNPRLRQPVPADLAQTLVGERLQGVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + S++VHLGMSGS + S +P H+HV L + R DPR Sbjct: 61 LLDFP-HGSVLVHLGMSGSLRV--VSADEPAGV--HDHV--DLVFGAEALRLR----DPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +P L LG EP + F +L ++K L++ V G+ Sbjct: 110 RFGLV-LWHAGDGLSHPLLAALGREPLERGFTGAWLHEATRGVRLSIKQTLMDAHRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ ++ L +L+ +++ L+ AIDAGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLAPAGAIGPQR------LARLVASVRETLLAAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G C C +RR+V RSTF+C CQ+ Sbjct: 223 GGDGRAGYFQQQYFVYGREGLAC-RVCATPVRRVVIGQRSTFFCPRCQR 270 >gi|161523697|ref|YP_001578709.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189351539|ref|YP_001947167.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|238687021|sp|A9AEZ2|FPG_BURM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160341126|gb|ABX14212.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189335561|dbj|BAG44631.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] Length = 275 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV-LPAGGVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 112 RFGAVLWHSREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L + ++ L DAID GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLAEAVRATLADAIDRGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|309792770|ref|ZP_07687214.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] gi|308225180|gb|EFO78964.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] Length = 275 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVM---KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI+ R+L + K + + + R D P F A G+ I+ V RRA Sbjct: 1 MPELPEVEIVARSLAAQVVGRKIVMLEKLDWERMVETPDLPD-FCALLIGRTILGVGRRA 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LLI+L+ ++ VHL MSG+ I+ A+P+ QH H+ + L + R+ + Sbjct: 60 KWLLIQLDAGWTLAVHLRMSGNLIV--YGPAQPVD--QHTHLVLGLDDGR-----RIFFT 110 Query: 118 DPRRFGFMDLVETS----LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R+FG + L++ + L Y GPEP D+ F + +L ++ + LK LL+ Sbjct: 111 DARKFGRLRLLDPAGIAHLDAAY------GPEPLDSHFTSSHLAALLAQRRTKLKPLLLD 164 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GNIY EALW A+L P L+ N TP + L IQ+VL AI G Sbjct: 165 QGFIAGLGNIYANEALWIAQLHP------LLPANQTPAQHVPALHAAIQQVLHTAIQNQG 218 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLR+Y + G G+ Q F VY + +PC C I RIV RSTF+C CQ+ Sbjct: 219 SSLRNYRNSYGEAGHNQEHFHVYDRAAQPC-ERCSTAINRIVVGQRSTFFCPQCQR 273 >gi|304399014|ref|ZP_07380883.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] gi|304353474|gb|EFM17852.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] Length = 269 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 152/292 (52%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILALSD-QPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPHGW-IIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP F+ YL + K + +K L++ K+ Sbjct: 110 RFGAWLWSSDLAGSSV------LAHLGPEPLSEQFDGAYLFDKSRGKRTLIKQWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFTAGIVPDRAAGSLSQAESE------LLVNTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD++ DG GYF VYG+ GEPC + CG I RST++C CQ Sbjct: 218 RDFLQTDGKPGYFAQQLQVYGRAGEPCRA-CGTPIVSGRHGQRSTYWCPNCQ 268 >gi|308188653|ref|YP_003932784.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] gi|308059163|gb|ADO11335.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] Length = 269 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 153/292 (52%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILALSD-QPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPHGW-IIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP + F+ YL + K + +K L++ K+ Sbjct: 110 RFGAWLWSSDLTGSSV------LAHLGPEPLSDQFDGTYLFDKSRGKRTLIKQWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFTAGILPDRAAGSLSQAEAE------LLVNTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD++ DG GYF VYG+ GEPC + CG I RST++C CQ Sbjct: 218 RDFLQTDGKPGYFAQQLQVYGRAGEPCRA-CGTPIISGRHGQRSTYWCPNCQ 268 >gi|149192220|ref|ZP_01870436.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] gi|148833951|gb|EDL50972.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] Length = 269 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + T+ +I + ++ LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLLDETIKEIVVRQRQLRWLIPQEIHQ-LHGQAITSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + P + +H+HV + L+N + YNDPR Sbjct: 60 LIDTDKG-TAIVHLGMSGSLRV----LENPPEAEKHDHVDLVLSNGKVMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L GPEP F A +++ + K +K ++N V G+ Sbjct: 110 RFGAWLWCAPGESHEL--LANCGPEPLTEEFCADWMSEKARNKRVAVKTFIMNNANVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P + L+ EI++VL AI GG++L+D+ Sbjct: 168 GNIYACESLFSAGIHPTTPAYKVTLTQ------WQLLVSEIKRVLAQAITQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG+ I ++ R+TF+C++CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRANEPC-HQCGEPIEQMKIGQRNTFFCSHCQQ 269 >gi|309803096|ref|ZP_07697193.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|309810236|ref|ZP_07704081.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] gi|308164604|gb|EFO66854.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|308169508|gb|EFO71556.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] Length = 276 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|329296441|ref|ZP_08253777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Plautia stali symbiont] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ H A + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAIVRNPRLRWPVSHEIHALSD-QPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + +H+HV + + N + Y DPR Sbjct: 60 LLELPHGW-IIIHLGMSGSLRV----LPGELPAAKHDHVDLVMNNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ L LGPEP ++FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTTDPEGSSVLAHLGPEPLSDAFNGGYLYEKSRGKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAMSLSEAEAE------LLANTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC + CG I RSTF+C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPCRA-CGTPILSGKHGQRSTFWCPRCQ 268 >gi|161505738|ref|YP_001572850.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189044673|sp|A9MKN9|FPG_SALAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160867085|gb|ABX23708.1| hypothetical protein SARI_03914 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I S A+P + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI--LSEAQPAE--KHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + K+ + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKRKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSKEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPVVATKHAQRATFYCRHCQK 269 >gi|325126151|gb|ADY85481.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 273 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P L N KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINP------LTPANELTKDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|37528666|ref|NP_932011.1| formamidopyrimidine-DNA glycosylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39931200|sp|Q7MY36|FPG_PHOLL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|36788105|emb|CAE17229.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 154/294 (52%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + + ++ + RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMKLS-DQLVLSIQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 LIEL N IIVHLGMSGS I P + P +H+HV + + + + Y D Sbjct: 60 LIEL-ANGWIIVHLGMSGSLRI------LPEERPAEKHDHVDLVMADGKVLR-----YTD 107 Query: 119 PRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PRRFG DL S+ L LGPEP + FN YL + K + +K L++ Sbjct: 108 PRRFGAWLWSDDLERCSV------LAHLGPEPLSDDFNGFYLYTRSSNKKTLIKPWLMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V G+GNIY EAL+ A + P R ++L + + L + I+KVL +I+ GG+ Sbjct: 162 KLVVGVGNIYANEALFTAHIQPDRPAQTLTEREA------HLLAETIKKVLQRSIERGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +LRD++ DG GYF VYG+ GEPC CG+ I I RSTF+C +CQ Sbjct: 216 TLRDFLQSDGKPGYFAQELFVYGRAGEPC-RICGEQIESIKLGQRSTFFCRHCQ 268 >gi|294055081|ref|YP_003548739.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] gi|293614414|gb|ADE54569.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + + + + LR+ P A G +I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGISPHVEGRLIVALHVRQPKLRWLVPELIQQAV-GHRILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ E SI++HLGMSGS I+ A P K H+HV + L + + NDPR Sbjct: 60 ILDTEVG-SIVLHLGMSGSLTIQPAGKA-PTK---HDHVDLVLEDGNCLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L+ LGPEP + F+ L K++ +KN +++ +V G+ Sbjct: 110 RFGACLWQASGETLEL--LQGLGPEPLTDDFDGERLYQLSRKRSGAVKNFVMSNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P + L + +L + I++VL AI+ GG++LRD++ Sbjct: 168 GNIYANEALFMSGIDPRKPAGKLSRAR------CDRLAESIKQVLARAIEKGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ SVYGK GEPC CG +I+ R++FYC+ CQ+ Sbjct: 222 GADGKPGYFRIELSVYGKAGEPC-PKCGNLIQSRTIGQRNSFYCSNCQR 269 >gi|254491571|ref|ZP_05104750.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxidans DMS010] gi|224463049|gb|EEF79319.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxydans DMS010] Length = 272 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 159/292 (54%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ P A + +++ V RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYVEGNTISKMVVRHRGLRWPVPEQLEAIVKDQRVTKVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L + ++I+HLGMSG + +H +H+HV I + N + + + Sbjct: 61 LFRCDKG-TLILHLGMSGRLRVLDNDHNI-------GKHDHVDIYINNG-----HVLRFT 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + E + + LGPEP + FNA YL + ++ N+K+ ++N +IV Sbjct: 108 DPRRFGAVLWTEADTD-THQLIAHLGPEPLADLFNADYLYQKAKGRSGNIKSFIMNGEIV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A + P + + K + +L++ I+ VL A+ AGG++LR Sbjct: 167 VGVGNIYANEALFLAGIHPAKAAGKI------SKAKMAELVEAIKLVLNRALLAGGTTLR 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG GYF +VYG+ EPCL C I I QA R+T++C CQ+ Sbjct: 221 DFRKSDGKPGYFAQELNVYGRENEPCL-RCQAPINCIRQAQRATYFCKQCQR 271 >gi|117924919|ref|YP_865536.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] gi|166215631|sp|A0L837|FPG_MAGSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117608675|gb|ABK44130.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] Length = 275 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 155/294 (52%), Gaps = 25/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + + + + + LR+ P G+ I V+RRAKY Sbjct: 1 MPELPEVETTRRGIEPALVGKRLCGVVVRQPQLRWPIPVKTLEKELVGQVIQQVARRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +++VHLGMSGS I EHT AK H+HV + + + Sbjct: 61 LLWRCPQG-TLLVHLGMSGSLRIVPEHTPPAK------HDHVDWVMEGGQMVR-----LH 108 Query: 118 DPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + + TS + ++P L LGPEP S N YL + +KN +++Q + Sbjct: 109 DPRRFGAVVWIPVTSPEEEHPLLAKLGPEPLHRSLNGRYLHQGSRGRQLAVKNYIMDQSV 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSS 235 V G+GNIY EAL+RA ++P Q G Y+ L I+ VL D+I+ GG++ Sbjct: 169 VVGVGNIYASEALFRAGIAP-------AQAAGKVGLGRYRALACAIKAVLGDSIEQGGTT 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF + +VYG+ G+ C CG I + V RS++YC CQ+ Sbjct: 222 LRDFIGSDGKPGYFVQSLNVYGRAGKAC-PKCGTTIEKQVLGQRSSYYCPQCQR 274 >gi|292490686|ref|YP_003526125.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] gi|291579281|gb|ADE13738.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] Length = 271 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + V + + LR+ P S G+ + V RR KYL Sbjct: 1 MPELPEVETVRCGIEPHLVGCQVRTVIVREPRLRWPVPLSLSENLTGQSFLTVQRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSGS + ++ + +H+H+ I L+N + +NDPR Sbjct: 61 LLNCPRG-TVLLHLGMSGSLRLVPSN----LPPKKHDHLDIVLSNGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +++P L+TLGPEP D F+ YL + + + +K ++N ++V GI Sbjct: 111 RFGSVLWTQEN-PWRHPLLKTLGPEPLDPLFDGPYLFKRSRHRQAPVKVFIMNPRVVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + +L + I+ VL AI AGG++LRD+V Sbjct: 170 GNIYASEALFQAGIHPRRAAGRISLAR------YQRLAEAIKTVLYQAIQAGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +YG+T PC CG I R+++YCT CQ Sbjct: 224 ASDGKPGYFSHQLQIYGRTAHPC-PTCGNPIHLDHIGQRASYYCTQCQ 270 >gi|59710737|ref|YP_203513.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] gi|75507118|sp|Q5E8M1|FPG_VIBF1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59478838|gb|AAW84625.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] Length = 272 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQKLV-GQRVQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ S I+HLGMSGS + + + + +H+HV + L N + YNDPR Sbjct: 60 MIDTPKG-SAIIHLGMSGSLRV----LDEEVPSAKHDHVDLVLENGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G+ Sbjct: 110 KFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P SL + T L+ EI+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAQIHPKTSVGSLKASQIT------LLVAEIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ + CL C +I+ R+TF+C +CQ Sbjct: 222 QVDGKPGYFAQELHVYGRAKKKCLL-CSSIIQEEKIGQRNTFWCGHCQ 268 >gi|330898971|gb|EGH30390.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 270 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGQRLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|66047985|ref|YP_237826.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae B728a] gi|81307826|sp|Q4ZM34|FPG_PSEU2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|63258692|gb|AAY39788.1| Formamidopyrimidine-DNA glycolase [Pseudomonas syringae pv. syringae B728a] gi|330954991|gb|EGH55251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae Cit 7] Length = 270 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|325912043|ref|ZP_08174441.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] gi|325475993|gb|EGC79161.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] Length = 276 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQ----KHEHVQFAFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|312874220|ref|ZP_07734254.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] gi|311090290|gb|EFQ48700.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] Length = 276 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|294637898|ref|ZP_06716167.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] gi|291088924|gb|EFE21485.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] Length = 248 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 152/269 (56%), Gaps = 30/269 (11%) Query: 26 ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEH 84 + + + LR+ P A + I+ V RRAKYLL+EL EG I++HLGMSGS I Sbjct: 5 LVVRQSRLRWPVPEAL-LALHDRPILSVQRRAKYLLLELPEG--WIVIHLGMSGSVRI-- 59 Query: 85 TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG----FMDLVETSLKYQYPPLR 140 S + P + +H+H+ + LT+ + Y DPRRFG + DL S+ L Sbjct: 60 LSASTPAQ--KHDHIDLRLTDGMCLR-----YTDPRRFGAWLWYEDLATASV------LA 106 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGPEP ++FNA YL + + + +K L++ K+V G+GNIY E+L+ A++ P R Sbjct: 107 HLGPEPLSDAFNAAYLLEKARGRRTAVKPWLMDNKLVVGVGNIYASESLFSAQIHPDRLA 166 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 SL +D + L+Q I+ VL +ID GG++LRD++ DG GYF VYG+ G Sbjct: 167 GSL------SRDEIALLVQTIKAVLQRSIDQGGTTLRDFLQADGKPGYFAQQLQVYGRAG 220 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 E CL+ CG I+ R+T+YC +CQ+ Sbjct: 221 EACLT-CGTTIKSSKHGQRTTYYCPHCQR 248 >gi|168464966|ref|ZP_02698858.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632352|gb|EDX50836.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 269 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPTEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|262172686|ref|ZP_06040364.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] gi|261893762|gb|EEY39748.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] Length = 269 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSELKQ-LEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSL------SLDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKLGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|90101305|sp|Q65R59|FPG_MANSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ + ++ +KI +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQLAQISQ-QKITALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I S P+ +H+H+ I + N + YNDPR Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRI--VSARDPVD--KHDHLDIVMNNGKIMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L +L ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 110 RFGTW-LWSANLD-EFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L + L+++I++ L AI+ GG++L+D++ Sbjct: 168 GNIYANETLFMCGLHPEKITAKLTKAQCA------LLVEKIKQELKRAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 222 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 269 >gi|301154721|emb|CBW14184.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus parainfluenzae T3T1] Length = 271 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 153/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + I+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTT-LKNVNILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ H S PI +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPHDS---PID--KHDHLDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E+ ++ LGPEP + FNA YL + KK++ LK L++ IV G Sbjct: 109 RRFGAWLWTESLDEFHL--FLKLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAIVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANETLFLCGLHPMKLAENLTRKQCA------LLVETIKDVLAKAITQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC C I +V R++FYC +CQK Sbjct: 221 LQPDGRPGYFAQKLLVYGNKDKPC-PKCSTKIESMVIGQRNSFYCPHCQK 269 >gi|163790756|ref|ZP_02185182.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] gi|159873936|gb|EDP68014.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] Length = 279 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ D+ R F G+KI RR K Sbjct: 1 MPELPEVETVRKGLEKLVLGATIKSVDVYWDRIIAGSIESTEFKQLLIGEKITGFDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++ + N +++ HL M G + +E ++ P+K +H HV L + + + Y D Sbjct: 61 YIVFHFK-NWALVSHLRMEGKYEVEESTV--PLK--KHTHVVFHLADGRDLR-----YLD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV +Y +R LGPEP +F+ + K +K LL+QKIVA Sbjct: 111 VRKFGRMTLVPLGEEYSMTGIRLLGPEPTKEAFDETTFFNTLLTKKRAIKPLLLDQKIVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ AK+ P+R SL K + +L + I KVL DA+ AGG+++R Sbjct: 171 GLGNIYVDEALFAAKIHPLRMANSL------KKQEVSQLHEAIIKVLGDAVKAGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G G FQ SVYGK G PC+ CG I +I A R T +C +CQ Sbjct: 225 YQNALGEAGKFQVKLSVYGKKGIPCI-RCGTPIEKIKVAQRGTHFCPHCQ 273 >gi|260774463|ref|ZP_05883377.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] gi|260610590|gb|EEX35795.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] Length = 269 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 155/289 (53%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ I + LR+ PH + G++I +SRRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQTIATITWRCEKLRWPIPHELTH-LEGQQITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE E + I+HLGMSG+ + +H+HV + L N + Y+DPR Sbjct: 60 FIETEAG-NAIIHLGMSGALRVLDAD----FPAGKHDHVDLVLANGKLLR-----YHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L +GPEP ++FNA + + + K +K +++ K V G+ Sbjct: 110 RFGAWLYIAPG--ESHPLLEHMGPEPLTDAFNAETIAKRANNKRLAIKAFIMDNKNVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L++AK+ P+R +SL D ++ L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFKAKIHPLRPAQSL-------SDTEWQCLVSEIKAVLATAIAQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC C + I A R++ +C +CQ Sbjct: 221 SQADGKPGYFAQELQVYGKGGKPC-PICAEPILEQKIAQRNSMFCNHCQ 268 >gi|269103920|ref|ZP_06156617.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163818|gb|EEZ42314.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 269 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ S IVHLGMSGS + A +H+HV + L++ + YNDPR Sbjct: 60 LLDTPVG-SAIVHLGMSGSLRVLPAGTAPE----KHDHVDLVLSSGEILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP ++F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDAFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + TP+ L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEV-----TPQ-ALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCPQCQQ 269 >gi|17545118|ref|NP_518520.1| formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum GMI1000] gi|24211708|sp|Q8Y2D7|FPG_RALSO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17427409|emb|CAD13927.1| probable formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum GMI1000] Length = 288 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 152/301 (50%), Gaps = 25/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE +++ ++VHLGM+G+ + T P H+H+ I L + + Sbjct: 61 LIECVPDIAHGPQAGAGWLLVHLGMTGTLRVLET----PAAPGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + Y DPRRFG + D E +L +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALS-AHPLLRNLGIEPFDTRFDGDWMYARTRGRSAAIK 174 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL IV G+GNIY E+L+RA + P + + L + I+ L DA Sbjct: 175 TVLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADA 228 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ Sbjct: 229 IARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQ 287 Query: 289 K 289 + Sbjct: 288 R 288 >gi|332289053|ref|YP_004419905.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] gi|330431949|gb|AEC17008.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] Length = 285 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + K+ + + + + LR+ ++I+DV RRAKYL Sbjct: 1 MPELPEVETTRKGIQPYTKHQQLVKLVIRTEKLRWVVSKEL-YQIENEEILDVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +LE IIVHLGMSGS + A +H+H+ + L+N + YNDPR Sbjct: 60 IFQLEYGY-IIVHLGMSGSLRVVTAKDAID----KHDHIDMVLSNGKILR-----YNDPR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 +FG + D +E +P L PEP + FN YL + +++ +K+ L+N +V Sbjct: 110 KFGAWLWTDSIE-----HFPLFSKLAPEPLSDEFNGEYLYQKSRNRHTAVKSWLMNNAVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E L+ + P SL K+ +L+ I++ L AI GG++L+ Sbjct: 165 VGVGNIYANEVLFNCGIYPNAPVSSL------SKEDCERLVANIKQTLQQAIKQGGTTLQ 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ DG GYFQ + +VYG+ GE C CG +I + RS+FYC CQ Sbjct: 219 DFIQPDGRPGYFQQSLNVYGRKGENC-PTCGHLIEMVTIGQRSSFYCPICQ 268 >gi|161616806|ref|YP_001590771.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189044674|sp|A9MVN0|FPG_SALPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161366170|gb|ABX69938.1| hypothetical protein SPAB_04625 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 269 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QGDGKPGYFAQELQVYGRKGEPC-RVCGTPIAATKHAQRATFYCRHCQK 269 >gi|303258441|ref|ZP_07344444.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|330999757|ref|ZP_08323465.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] gi|302858887|gb|EFL81975.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|329573919|gb|EGG55499.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] Length = 275 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R ++ + T + R P + S +G+ + + RR KYL Sbjct: 1 MPELPEVEITRLGILKRVGGRRCTGAVVRETRFRKAAPANLSELLKGQCLRSIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + I+ HLGMSG + +P+K H+H+ I + V Y+DPR Sbjct: 61 IWSFDRGY-IVSHLGMSGVMRVVDPKATEPVK---HDHIDILFGD------LAVRYHDPR 110 Query: 121 RFGFM-DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFGF+ L E+ + P + LG EP + F A L + +K ALL K V G Sbjct: 111 RFGFLIWLPESQDPHDLPEIAKLGEEPFSDGFTADRLHSALANTSLPIKEALLTGKYVVG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A +SP+ L L +L+ I++VL ++ GGS+L+D+ Sbjct: 171 VGNIYCSESLFEACISPLTPANKLSTKR------LERLVAAIRQVLTLSLQEGGSTLKDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G GYF VYGK G+PC S CG+ I++IVQ R+T++C++CQ+ Sbjct: 225 VSAEGEQGYFTLNAKVYGKAGKPC-SCCGRPIKKIVQNKRATYFCSHCQR 273 >gi|221211197|ref|ZP_03584176.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] gi|221168558|gb|EEE01026.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] Length = 305 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+HV ++ + + DPR Sbjct: 91 LFEVDAGW-FIVHLGMTGTLRV-LPAGGVPVAA-KHDHVDWIF------DEFVLRFRDPR 141 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|148828123|ref|YP_001292876.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittGG] gi|166215626|sp|A5UI87|FPG_HAEIG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148719365|gb|ABR00493.1| hypothetical protein CGSHiGG_08295 [Haemophilus influenzae PittGG] Length = 271 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N Y L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CYSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|221206856|ref|ZP_03579868.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] gi|221173511|gb|EEE05946.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] Length = 300 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 26 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 85 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ ++ + + DPR Sbjct: 86 LFEVDAGW-FIVHLGMTGTLRV-LPAGGVPVAA-KHDHIDWIF------DEFVLRFRDPR 136 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 137 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 196 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAID GGS+LRD Sbjct: 197 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIDRGGSTLRD 250 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 251 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 300 >gi|119773259|ref|YP_925999.1| formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] gi|166198747|sp|A1S1S3|FPG_SHEAM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119765759|gb|ABL98329.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] Length = 271 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 31/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++ V + + NLR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVPE-LAQNIVGQTILGVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI-YN 117 LI+ + + IVHLGMSGS + P P +H+H+ + + N RV+ +N Sbjct: 60 LIDTQAG-TTIVHLGMSGSLRV------LPKNTPVEKHDHIDLVMQNG------RVLRFN 106 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 DPRRFG + +L E + +P L LGPEP +F+A YL K +K L++ Sbjct: 107 DPRRFGAWLWSELPEAA----HPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDN 162 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 IV G+GNIY EAL+ A + P + + + L L E++ +L AI GG+ Sbjct: 163 AIVVGVGNIYANEALFAAGIHPEAEAGKV------DAERLTLLTAEVKTILTQAIKQGGT 216 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +L+D+ + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQ Sbjct: 217 TLKDFTNADGKPGYFAQKLHVYGRGGETC-TECGHLLSEIRLGQRTTVFCSLCQ 269 >gi|194445857|ref|YP_002042976.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693550|sp|B4SXD7|FPG_SALNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194404520|gb|ACF64742.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 269 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + D+ L Q I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSL---STAECDL---LAQVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|330818348|ref|YP_004362053.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] gi|327370741|gb|AEA62097.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] Length = 275 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P +F+AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGHRVRRVDVRTAMLRWPVPENFAAALESREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL+ IVHLGM+G+ + A + +H+H I + ++R DPR Sbjct: 61 LFELDAGW-FIVHLGMTGTLRVLPGGVAP--QAGKHDH--IDWIFDACVLRFR----DPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E +++ L +LG EP +F A L + + ++K ALL IV Sbjct: 112 RFGAVLWHPREQGDIHEHHLLTSLGVEPFSPAFTAALLYRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|146284319|ref|YP_001174472.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] gi|166198735|sp|A4VRM9|FPG_PSEU5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145572524|gb|ABP81630.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] Length = 270 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + A P +H HV I L + + Y DPR Sbjct: 61 LIRAESG-TLIVHLGMSGSLRL--VDAASPAA--KHEHVDILLESGQALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + L + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSDEPLAHVL--LASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRAR------YLKLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C S CG +R I R++ YC+ CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFCKS-CGSTLREIRLGQRASVYCSRCQR 270 >gi|16762583|ref|NP_458200.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144072|ref|NP_807414.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415616|ref|YP_152691.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168235331|ref|ZP_02660389.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168818444|ref|ZP_02830444.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194734471|ref|YP_002116661.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263131|ref|ZP_03163205.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364543|ref|YP_002144180.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204928552|ref|ZP_03219751.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354672|ref|YP_002228473.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858963|ref|YP_002245614.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161284|ref|ZP_03346994.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425232|ref|ZP_03357982.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213615651|ref|ZP_03371477.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289824124|ref|ZP_06543721.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362542|sp|Q8Z2H2|FPG_SALTI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81677677|sp|Q5PC09|FPG_SALPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689781|sp|B4TZX7|FPG_SALSV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690465|sp|B5R5F9|FPG_SALEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690539|sp|B5RGF2|FPG_SALG2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690753|sp|B5BI09|FPG_SALPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|25289586|pir||AG0971 formamidopyrimidine-DNA glycosylase STY4068 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504888|emb|CAD03267.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139709|gb|AAO71274.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129873|gb|AAV79379.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194709973|gb|ACF89194.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096020|emb|CAR61607.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197241386|gb|EDY24006.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291486|gb|EDY30838.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321985|gb|EDZ07183.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274453|emb|CAR39485.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205344433|gb|EDZ31197.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710766|emb|CAR35127.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088146|emb|CBY97908.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326625471|gb|EGE31816.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 269 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|315648810|ref|ZP_07901905.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315275778|gb|EFU39130.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 278 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 156/291 (53%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + +H + R D F+ + + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDQVSVHLPRIIQRPDDAEAFAFMLKDHTVQGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+G L ++ HL M G + + +P++ +H HV ++ T + Y D Sbjct: 61 FLRILLDG-LVLVSHLRMEGRYGL--YRAEEPVE--KHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++++ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFKHAPLAKLGYEPLDDTFTLGTFKQVIGSKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIYV EAL+RAK+ P R SL KD L +L I L +A++AGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERSANSL-------KDAELKRLYHAIVDTLSEAVNAGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ +PC + CG + ++V GR T YC CQ Sbjct: 224 SYVNGQGEMGMFQHSHQIYGRKDKPCHA-CGGPVHKMVVGGRGTHYCPKCQ 273 >gi|297180061|gb|ADI16286.1| formamidopyrimidine-DNA glycosylase [uncultured bacterium HF0010_16H03] Length = 269 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + N + I +H +NLR+ + +R + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIDK-FTNQRIKSIKVHNRNLRWKVDKNLETISRNQLVKALRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL+ + S+I+HLGMSGS I + S IK H+H+ N ++IYNDPR Sbjct: 60 IFELDTS-SLILHLGMSGSLRISNVSDNYFIK---HDHIEFIFDNE------KIIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + TS + +R LG EP FN +YL K +N+K L+NQK V GI Sbjct: 110 RFGSLHI--TSNVDTHNLIRNLGAEPLSKDFNGVYLFDLCSKSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L ++++P R L N + K++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLHLSRINP----RRLACNISLQE--CKKIVSSSKKILKAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF A VYG+ G C C I++I R+T+YC CQ Sbjct: 222 SADGSPGYFNFALKVYGREGLQC-KVCDDKIKKINLNTRATYYCDNCQ 268 >gi|239996975|ref|ZP_04717499.1| formamidopyrimidine-DNA glycosylase [Alteromonas macleodii ATCC 27126] Length = 269 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P A G+ +I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITQVVVRERRMRWPIPQEV-ANVEGQSVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S PI +H+HV I L NT K + +NDPR Sbjct: 60 LIETAKG-TLILHLGMSGKLRVIDAST--PII--KHDHVDIVL----NTGKC-LRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGAVLFQAPDM--QIAMLDNLGPEPLTDDFDDKRLFKLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R G Y+ L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAA-------GNISAARYQSLTATIKQVLAKAIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC CG+ I V R+TF+CT+CQ+ Sbjct: 221 AQTDGKPGYFAQHLNVYGRKGEPC-EVCGKAIESKVIGQRNTFFCTHCQR 269 >gi|116514451|ref|YP_813357.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274817|sp|Q049F3|FPG_LACDB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116093766|gb|ABJ58919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 273 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTVVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P L N KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINP------LTPANELTKDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|297529111|ref|YP_003670386.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] gi|297252363|gb|ADI25809.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] Length = 274 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 155/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRQAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|262377505|ref|ZP_06070727.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] gi|262307561|gb|EEY88702.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] Length = 286 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 163/290 (56%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V + + + +LR+ P + G+K++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLEQ-RVKRVEVRQSSLRWPIPENIEKLV-GQKLLKLTRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + +++ HLGMSGSF + C + +H+H+ I + + Y+DPR Sbjct: 59 LAEFEHD-TMLWHLGMSGSFRL----CESNEELRKHDHLIIQFED------IELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + Q + TLGPEP +FNA YL + KN K A+++ IV G+ Sbjct: 108 RFGCILWLDA--QSQSKLIDTLGPEPLSENFNAKYLFEKLKNKNVGTKVAIMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIR--KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E+L+ + P + T SL+Q + KL+ EI+++L AID GGS+LRD Sbjct: 166 GNIYATESLFNLGIHPAQPASTLSLVQ--------IEKLVLEIKRILKQAIDLGGSTLRD 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 218 YTNAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|52425999|ref|YP_089136.1| formamidopyrimidine-DNA glycosylase [Mannheimia succiniciproducens MBEL55E] gi|52308051|gb|AAU38551.1| Nei protein [Mannheimia succiniciproducens MBEL55E] Length = 292 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ + ++ +KI +SRRAKYL Sbjct: 23 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQLAQISQ-QKITALSRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I S P+ +H+H+ I + N + YNDPR Sbjct: 82 IIHTEQGY-IIGHLGMSGSVRI--VSARDPVD--KHDHLDIVMNNGKIMR-----YNDPR 131 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L +L ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 132 RFGTW-LWSANLD-EFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 189 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L K L+++I++ L AI+ GG++L+D++ Sbjct: 190 GNIYANETLFMCGLHPEKITAKLT------KAQCALLVEKIKQELKRAIEQGGTTLKDFL 243 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 244 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 291 >gi|315223054|ref|ZP_07864933.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] gi|315188004|gb|EFU21740.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] Length = 274 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADPFVLELPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L N +I HL M G ++ + ++ +H+HV T+ ++ ++Y D R Sbjct: 61 IFYLT-NWVLISHLRMEGKYLF----YPEEVQLTKHSHVIFHFTDGSS-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP ++ F+ + K +K LL+Q +VAG+ Sbjct: 111 KFGTMELLRKEQITSYFTERKLGPEPTESDFHLLPFETALKKSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +SL +L ++I VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARAAQSLTAGEAE------ELRKQIIAVLQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|209693776|ref|YP_002261704.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|209693803|ref|YP_002261731.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007727|emb|CAQ77843.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007754|emb|CAQ77873.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] Length = 272 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + + LR+ P G++I + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLV-GQRIQSIRRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I+ EG + I+HLGMSGS I + I +H+HV + L + + YNDP Sbjct: 60 MIDTPEG--TAIIHLGMSGSLRI----LDEAIPTAKHDHVDLVLDSGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG E + + L LGPEP + FN YL + K +K ++N IV G Sbjct: 109 RKFGAWLYSEVGVSHDV--LAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTIVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ AK++P +L + +L+ +I+KVL AI GG++L+D+ Sbjct: 167 VGNIYASESLFMAKINPKAPVGTLTLAQ------IERLVSDIKKVLETAIKQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ GE CL C +I+ R+TF+C CQ Sbjct: 221 NQVDGKPGYFAQELQVYGRAGEACLI-CQSLIQEQKIGQRNTFWCEKCQ 268 >gi|229916391|ref|YP_002885037.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] gi|259647145|sp|C4L470|FPG_EXISA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229467820|gb|ACQ69592.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] Length = 275 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + T+ + L K +R P + G+ I DV RR K+ Sbjct: 1 MPELPEVETVCRRLRPAVSGKTIQSVDVLDPKIIRGLDPEEWVHHLIGETITDVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L +L N ++ HL M G F + + +P+K H HV I+ T+ + + YND Sbjct: 61 ILFKLT-NGYLVSHLRMEGKFF-PYETATEPVK---HTHVVITFTDQST-----LHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVA 178 R+FG M+L + PPL L EP D L + + K +K ALL+Q I Sbjct: 111 RKFGTMELRTNETIHTTPPLSLLAYEPFDERVTTEALHRRLERMKTRAIKTALLDQSIFV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P R SL ++ + ++ E VL +AI+ GGS++R Sbjct: 171 GLGNIYVDETLFRAGVHPTRPAASL------SREEVDRVRTEAVAVLNEAIERGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG+ G FQ VYG+TGEPC CG I ++ GR T YC +CQ+ Sbjct: 225 YADPDGATGTFQERLYVYGQTGEPC-RRCGHEIEKMKLGGRGTHYCPHCQQ 274 >gi|297569572|ref|YP_003690916.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] gi|296925487|gb|ADH86297.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] Length = 305 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 158/301 (52%), Gaps = 23/301 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + I LR P G ++ VSRRAKY Sbjct: 1 MPELPEVEVVRRGLEPLVLQRQIARISASGLPLRRPVPLAELRRWGEGARVTGVSRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN----------T 109 LL+ L+ + +I HLGM+G F P + +H+H+ + L ++ N Sbjct: 61 LLLHLDNSALLIFHLGMTGKFYPAVAD--DPPR--KHDHLVLHLNDHANDGHGGRGASGQ 116 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLK 168 K ++ +ND RRFG + + + L LGPEP D+ +F YL + + + +K Sbjct: 117 KVAQIRFNDCRRFGLVAVCAPAETTAPALLAGLGPEPLDDKAFTPAYLAQRCAHRRTPIK 176 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 N L++ ++V GIGNIY E L+ A + P + + L K+ +++L A Sbjct: 177 NLLMDNRVVVGIGNIYANEVLFAAGVHPQTPAGEISRAR------LKKICAAAREILTRA 230 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I AGG+++ D+ + G GYFQ +VYG+ G+PC CG+ I R VQAGR+T++C CQ Sbjct: 231 IAAGGTTIADFANAAGESGYFQVQLAVYGRGGQPC-PRCGREIVRQVQAGRATYFCPRCQ 289 Query: 289 K 289 + Sbjct: 290 R 290 >gi|221199989|ref|ZP_03573032.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] gi|221180228|gb|EEE12632.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] Length = 305 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 91 LFEVDAGW-FIVHLGMTGTLRV-LPAGGVPVAA-KHDHI------DWIFDEFVLRFRDPR 141 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|197249599|ref|YP_002148658.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238910239|ref|ZP_04654076.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|238689996|sp|B5EXE0|FPG_SALA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197213302|gb|ACH50699.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 269 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|157373258|ref|YP_001471858.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] gi|157315632|gb|ABV34730.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] Length = 273 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + T + + +LR+ P + G+ I +V RRAKYL Sbjct: 3 MPELPEVEVTRQGITPHLVDQQATALTVRNASLRWPVPD-IAQQIVGETIRNVRRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I S P++ +H+H+ + L + + +NDPR Sbjct: 62 LIDTDAG-TTIVHLGMSGSLRI--VSRNTPVE--KHDHIDLELASGKILR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 112 RFGAWLWCELP-EEAHPLLSKLGPEPLKDGFNPTYLEQILKNKKKAIKLCLMDNHIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P Q + L L+ E++++L +AI GG++L+D+ Sbjct: 171 GNIYANEALFAAGIHP------ETQAGNVDTERLTILVTEVKQILANAIKQGGTTLKDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 225 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 271 >gi|125623242|ref|YP_001031725.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris MG1363] gi|55669903|pdb|1TDZ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|124492050|emb|CAL96978.1| Fpg protein [Lactococcus lactis subsp. cremoris MG1363] gi|300069992|gb|ADJ59392.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris NZ9000] Length = 272 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ + ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPRE----KHDHLTMKFADG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 AL-GSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|262277744|ref|ZP_06055537.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] gi|262224847|gb|EEY75306.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] Length = 286 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 109/298 (36%), Positives = 169/298 (56%), Gaps = 23/298 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI + +L + + V ++ + LR+ + + K I + RR+KYL Sbjct: 1 MPELPEVEITKISLSKQILHKKVKNVTILNPRLRYKLNKQNLLSLKNKIIKKIIRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFI--------IEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 LI ++VHLGM+G F I+ + K +H+H+ +S K + Sbjct: 61 LIHFNDKNILLVHLGMTGRFYFVKKGKNKIDTSFYTKNEIIKKHDHLKLSF------KGF 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +IYND R+FGF+ + ++ L +LGPEP +F+ YL ++ NS++KN L+ Sbjct: 115 DLIYNDIRKFGFIKKILSTNIESTKHLSSLGPEPLSLNFSFKYLKNKIRNSNSSVKNLLM 174 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI-LYKLIQEIQKVLIDAIDA 231 NQ +V+G+GNIYV EAL+R+ +SP + + L KDI K+I I+KVL AI A Sbjct: 175 NQSVVSGLGNIYVNEALFRSCVSPQKPGKFL-------KDIETRKIIIAIKKVLKMAIKA 227 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGS++++Y + +G G +Q F VY + GE C + C IRR++ +GRS+F+C CQ Sbjct: 228 GGSTIQNYHNSEGKTGSYQANFKVYDREGETCKRAGCTGKIRRVIASGRSSFFCIKCQ 285 >gi|134299455|ref|YP_001112951.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] gi|172044279|sp|A4J4X3|FPG_DESRM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134052155|gb|ABO50126.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] Length = 277 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 156/294 (53%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL----RFDFPHHFSAATRGKKI-IDVSR 55 MPELPEVE I R+L + + +T + L + + R D F+ G++ + R Sbjct: 1 MPELPEVETIVRSLEKHLSGLVITSVDLFKPEVIRTPRVDI---FTDQIVGRQFQKKLGR 57 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYLL+ + L++++HL M+G I C + +H HV L N + Sbjct: 58 RGKYLLLHMSDGLTLVIHLRMTGRLIY----CDADLPLEKHTHVIFHLDNGKQLR----- 108 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D RRFG M LV T P ++ +GPEP D +F+ YL + ++ + +K+ LL+Q Sbjct: 109 FADVRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLDQC 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAG+GNIY EAL AK+ P R L + L+K I E V+ I G++ Sbjct: 169 FVAGLGNIYADEALHEAKIHPERLAPDLTSREASG---LHKAIIE---VISSGIKHRGTT 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYV +G G +Q+ VY + G PC +CG+ I+RI AGRS++YC+ CQK Sbjct: 223 FRDYVDGEGRSGSYQHQLKVYNREGLPC-PHCGKPIQRIKVAGRSSYYCSSCQK 275 >gi|299068042|emb|CBJ39256.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CMR15] Length = 288 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 151/301 (50%), Gaps = 25/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE G ++VHLGM+G+ + T P H+H+ I L + + + Sbjct: 61 LIECVPDVARGPQAGAGWLLVHLGMTGTLRVLET----PAAPGTHDHLDIELAD-ADGRP 115 Query: 112 YRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + Y DPRRFG + D E +L +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALS-AHPLLRNLGIEPFDARFDGNWMHARTRGRSAAIK 174 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL IV G+GNIY E+L+RA + P + + L + I+ L DA Sbjct: 175 TVLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADA 228 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ Sbjct: 229 IARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQ 287 Query: 289 K 289 + Sbjct: 288 R 288 >gi|326629811|gb|EGE36154.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 287 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 19 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 77 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 78 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 128 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 185 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 186 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 239 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 240 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 287 >gi|167549026|ref|ZP_02342785.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325559|gb|EDZ13398.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 269 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 155/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSL---STAECDLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|283787732|ref|YP_003367597.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] gi|282951186|emb|CBG90879.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGAKILHAHVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQAD------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRRCQK 269 >gi|145601093|ref|YP_001165169.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] gi|166198758|sp|A4TSD4|FPG_YERPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145212789|gb|ABP42196.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] Length = 278 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 151/293 (51%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS + E T+ K H+HV + ++N + Y D Sbjct: 60 LLELPKGW-IIIHLGMSGSLRVLSEETAAEK------HDHVDLVVSNGKILR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + +ETS L LGPEP + F A YL + K + +K L++ K Sbjct: 108 PRRFGAWLWAKDLETS-----NVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 217 LRDFLQSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|198241869|ref|YP_002217687.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690332|sp|B5FM59|FPG_SALDC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197936385|gb|ACH73718.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 158/294 (53%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----HHFSAATRGKKIIDVSR 55 MPELPEVE RR + + T+ + H +N R +P + S ++ V R Sbjct: 1 MPELPEVETSRRGIEPHLVGATI--LHAHIRNGRLRWPVSDKIYRLSDTP----VLSVQR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 RAKYLL+EL II+HLGMSGS I ++ + +H+HV + ++N + Sbjct: 55 RAKYLLLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR----- 104 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K Sbjct: 105 YTDPRRFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++ Sbjct: 163 LVVGVGNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 217 LKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|311031366|ref|ZP_07709456.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. m3-13] Length = 277 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L+ +++ T+ + L K ++ D F G++I+ + RR K Sbjct: 1 MPELPEVETVRKTLVELVQGKTIKQVKVLWPKMIKEPDDAALFEEMLIGQEIVKIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + K +H HV ++T + Y D Sbjct: 61 FLLFYLT-DYCMVSHLRMEGKYGL----FQKEEPANKHTHVFFYFEDDTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L + + L +LGPEP ++ FN L + K N N+K LL+Q +V Sbjct: 111 VRKFGTLHLYKKGEELAAKSLASLGPEPFEDEFNLDLLKERLAKTNRNIKAVLLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R + SL + L +L +EI L +A+D GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERISSSLNEKE------LIELQREIVLTLQEAVDKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GEPC CG I + V AGR T C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEPC-RKCGHEIEKTVVAGRGTHTCPKCQ 273 >gi|301169670|emb|CBW29271.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus influenzae 10810] Length = 271 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 153/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ S +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQNSAID-----KHDHIDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + LGPEP + FNA YL + +K++ LK L++ +V G Sbjct: 109 RRFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|91791579|ref|YP_561230.1| formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] gi|123166575|sp|Q12SR9|FPG_SHEDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91713581|gb|ABE53507.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] Length = 271 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 158/290 (54%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV ++ + +LR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVDQTVVELIVRNASLRWPVPD-LAHNIVGQTILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I VHLGMSGS I + P++ +H+H+ + L N + +NDPR Sbjct: 60 LIDTEAGITI-VHLGMSGSLRILPRNT--PVE--KHDHIDLVLANGRMLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN + L K +K L++ IV G+ Sbjct: 110 RFGAWLWYELP-EEAHPLLAKLGPEPLSEAFNPLQLLTALKGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+ A + P ++ DI L L+ E++++L AI GG++L+D Sbjct: 169 GNIYANEALFAAGIHP--------ESEAGKIDIEKLTLLVVEVKQILAQAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + DG GYF VYG+ + C ++CG ++ I R+T +C CQ Sbjct: 221 FTNADGKPGYFAQKLHVYGRGSKSC-THCGNLLSEIRLGQRTTVFCGLCQ 269 >gi|58617172|ref|YP_196371.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] gi|58416784|emb|CAI27897.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ + L + T+ I ++R +LR +G I + R+ KY+ Sbjct: 1 MPELPEVEIVCKILSTKIVGKTILKIQINRYDLRTQITEKLVDIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHDYVTM-----KHNHVLFFFNDNQ-----ILVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + K + G +P ++FN YL F++K S +K+ L+N KI+ GI Sbjct: 111 RFGSLTLL--TYKQYLEFFKDFGIDPLSDNFNTEYLYSTFNRKTS-IKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFTAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q GR+TF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCYI-CNNKISMIKQHGRNTFFCSHCQ 268 >gi|22124009|ref|NP_667432.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis KIM 10] gi|45439918|ref|NP_991457.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51594407|ref|YP_068598.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108809481|ref|YP_653397.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|108813958|ref|YP_649725.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Nepal516] gi|150260884|ref|ZP_01917612.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|153948540|ref|YP_001399065.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162418456|ref|YP_001604698.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165926106|ref|ZP_02221938.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936106|ref|ZP_02224675.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|166011428|ref|ZP_02232326.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213712|ref|ZP_02239747.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402103|ref|ZP_02307580.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419226|ref|ZP_02310979.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426672|ref|ZP_02318425.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469342|ref|ZP_02334046.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis FV-1] gi|170026359|ref|YP_001722864.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186893395|ref|YP_001870507.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|218927273|ref|YP_002345148.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|229836165|ref|ZP_04456333.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|229839901|ref|ZP_04460060.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841983|ref|ZP_04462138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229904488|ref|ZP_04519599.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|270488487|ref|ZP_06205561.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294502157|ref|YP_003566219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|21362543|sp|Q8ZJP0|FPG_YERPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81691945|sp|Q66GD3|FPG_YERPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122979351|sp|Q1C270|FPG_YERPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123372834|sp|Q1CD05|FPG_YERPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988465|sp|A7FCT7|FPG_YERP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238687318|sp|A9R677|FPG_YERPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238688491|sp|B1JQX0|FPG_YERPY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691335|sp|B2JYN6|FPG_YERPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21956751|gb|AAM83683.1|AE013609_8 formamidopyrimidine DNA glycosylase [Yersinia pestis KIM 10] gi|45434773|gb|AAS60334.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51587689|emb|CAH19289.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108777606|gb|ABG20125.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Yersinia pestis Nepal516] gi|108781394|gb|ABG15452.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|115345884|emb|CAL18742.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|149290292|gb|EDM40369.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|152960035|gb|ABS47496.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162351271|gb|ABX85219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165915720|gb|EDR34328.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|165921966|gb|EDR39143.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989574|gb|EDR41875.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205114|gb|EDR49594.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963220|gb|EDR59241.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048478|gb|EDR59886.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054361|gb|EDR64178.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752893|gb|ACA70411.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186696421|gb|ACC87050.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|229678606|gb|EEO74711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|229690293|gb|EEO82347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229696267|gb|EEO86314.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706613|gb|EEO92619.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|262360236|gb|ACY56957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D106004] gi|262364183|gb|ACY60740.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D182038] gi|270336991|gb|EFA47768.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294352616|gb|ADE62957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|320013406|gb|ADV96977.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 151/293 (51%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+EL II+HLGMSGS + E T+ K H+HV + ++N + Y D Sbjct: 60 LLELPKGW-IIIHLGMSGSLRVLSEETAAEK------HDHVDLVVSNGKILR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + +ETS L LGPEP + F A YL + K + +K L++ K Sbjct: 108 PRRFGAWLWAKDLETS-----NVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 217 LRDFLQSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|16767011|ref|NP_462626.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994347|ref|ZP_02575439.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241905|ref|ZP_02666837.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260520|ref|ZP_02682493.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194451470|ref|YP_002047758.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|6016042|sp|O54326|FPG_SALTY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690227|sp|B4T9C0|FPG_SALHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2842793|gb|AAC01773.1| MutMST [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422294|gb|AAL22585.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194409774|gb|ACF69993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205327810|gb|EDZ14574.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338984|gb|EDZ25748.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350455|gb|EDZ37086.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248874|emb|CBG26728.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995987|gb|ACY90872.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160263|emb|CBW19786.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914752|dbj|BAJ38726.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226779|gb|EFX51829.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132086|gb|ADX19516.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990575|gb|AEF09558.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|258620580|ref|ZP_05715617.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] gi|258587095|gb|EEW11807.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWSIPQELKQ-LEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I P+ +H+HV + +TN R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGDF--PVA--KHDHVDLVMTNGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMADKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSCIHPLRPANSL------SLDEWQTLVTNIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|291619454|ref|YP_003522196.1| MutM [Pantoea ananatis LMG 20103] gi|291154484|gb|ADD79068.1| MutM [Pantoea ananatis LMG 20103] gi|327395777|dbj|BAK13199.1| formamidopyrimidine-DNA glycosylase MutM [Pantoea ananatis AJ13355] Length = 275 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 152/292 (52%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + + ++ V RRAKYL Sbjct: 7 MPELPEVETSRRGIEPHLVGQTILHAVVRNARLRWPVSQEILALS-DQPVLSVQRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 66 LLELPHGW-IIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 115 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP +F+ YL + K + +K L++ KI Sbjct: 116 RFGAWLWSSDLAGSSV------LAHLGPEPLSEAFSGDYLFEKSRGKRTVIKQWLMDNKI 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++L Sbjct: 170 VVGVGNIYASESLFTAGIIPDRPAMSLSHEDAA------ILANTIKAVLLRSIEQGGTTL 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD++ DG GYF VYG+ GEPC + CG I RST++C CQ Sbjct: 224 RDFLQSDGKPGYFAQELQVYGRAGEPCRA-CGTPIVSGKHGQRSTYWCPNCQ 274 >gi|50119109|ref|YP_048276.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] gi|81693474|sp|Q6DAV4|FPG_ERWCT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49609635|emb|CAG73068.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] Length = 269 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 157/293 (53%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTILYAEVRNARLRWPVSAEILSLS-DEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS I E++ K H+HV + + + + Y D Sbjct: 60 LIELTHGW-IIVHLGMSGSLRILPEYSEPEK------HDHVDLVMDSGKVLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D +ETS L LGPEP + F A YL K + +K +++ K Sbjct: 108 PRRFGAWLWTDSLETS-----SVLAHLGPEPLEAEFFADYLYQASRGKKTAIKQWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL +N+ D+L ++I+++ ++ +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGIHPDRAAGSLNENDA---DVLVRVIKQVLQL---SIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRD++ DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 217 LRDFLQSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQ 268 >gi|167561491|ref|ZP_02354407.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis EO147] gi|167568721|ref|ZP_02361595.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis C6786] Length = 276 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R +++++V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVKRVDVRTAMLRWPVPAGFAELLRAREVLNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIF------DEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L +LG EP +F L + + ++K ALL+ IV Sbjct: 113 RFGAVLWHPRDAGDVQAHPLLASLGVEPFSPAFTGALLFKRTRGRTVSVKQALLSGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L + ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--CERLAEAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ SVY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCSVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 276 >gi|170766560|ref|ZP_02901013.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] gi|170123998|gb|EDS92929.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] Length = 269 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 110/292 (37%), Positives = 155/292 (53%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRSS-NQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L+EL EG II+HLGMSGS I P + P +H+HV + ++N + Y Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI------LPEERPPEKHDHVDLVMSNGKVLR-----YT 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K+V Sbjct: 107 DPRRFGAW--LWTRALEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+ Sbjct: 165 VGVGNIYASESLFAAGIHPDRLASSLSLAE------CELLVRMIKTVLLRSIEQGGTTLK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 219 DFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|242237621|ref|YP_002985802.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] gi|242129678|gb|ACS83980.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] Length = 269 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 153/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + T+ + LR+ P S + ++ V RRAKY Sbjct: 1 MPELPEVETSRRGIEPYLVGHTILYAEVRNARLRWPVSPEILSLSD--TPVLSVQRRAKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLIEL +IVHLGMSGS + + I+ +H+HV + L + + Y DP Sbjct: 59 LLIELTSGW-MIVHLGMSGSLRV----LPEYIEPDKHDHVDLVLDSGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + P L LG EP +F YL Q + + +K +++ K+V G Sbjct: 109 RRFGAW--LWSPDPSTSPVLAHLGLEPLGAAFTGEYLFSQSRGRKTPVKLWIMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L+ I+ VL +I+ GG++LRD+ Sbjct: 167 VGNIYASESLFGAGILPDRPAGSLSEQEA------HRLVATIRAVLQRSIEQGGTTLRDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF A VYG+TGEPC CG + + Q RSTF+C +CQ Sbjct: 221 LQSDGKPGYFAQALQVYGRTGEPC-RQCGTPVESVKQGQRSTFFCRHCQ 268 >gi|258625891|ref|ZP_05720766.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] gi|258581855|gb|EEW06729.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] Length = 269 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSELKQ-LEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSL------SLDDWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|261377763|ref|ZP_05982336.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] gi|269146052|gb|EEZ72470.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] Length = 275 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVETVILRQPKLRWQVNPALGDILSGQQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + K +H+H ++ T + Y+DPR Sbjct: 61 IVRFPMGI-LLIHLGMSGSLRIFTPSDERIGKPGKHDHTDFVFSDGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 115 RFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R + K L+ ++ VL AI+ GGS+L+D+V Sbjct: 174 GNIYANESLFRAAVSPKRPACRV------KKKECAVLVDAVKAVLRRAIETGGSTLKDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ ++VYG+ C+ CG +I + + R TFYC CQK Sbjct: 228 DSNGKSGYFQQEYTVYGRHNLQCV-RCGGLIVKEILGQRGTFYCPNCQK 275 >gi|197333929|ref|YP_002154899.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] gi|238690292|sp|B5FFG1|FPG_VIBFM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197315419|gb|ACH64866.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] Length = 273 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQKLV-GQRVQSIRRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I+ EG S I+HLGMSGS + + + + +H+HV + L N + YNDP Sbjct: 60 MIDTPEG--SAIIHLGMSGSLRV----LDEEVPSAKHDHVDLVLENGKVLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G Sbjct: 109 RKFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A++ P SL + T L+ EI+KVL AI GG++L+D+ Sbjct: 167 VGNIYASESLFMAQIHPKTPVGSLKASQIT------VLVAEIKKVLETAIKQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ G+ C C I R++F+C CQ Sbjct: 221 NQVDGKPGYFAQELKVYGRAGKEC-PVCSSKIEEEKIGQRNSFWCGKCQ 268 >gi|68249533|ref|YP_248645.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] gi|81336040|sp|Q4QLW2|FPG_HAEI8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68057732|gb|AAX87985.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] Length = 271 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRKPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 269 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 155/294 (52%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILSLS-DEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS + E++ K H+HV + + + + Y D Sbjct: 60 LIELTRGW-IIVHLGMSGSLRVLPEYSEPEK------HDHVDLVMDSGKVLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D ET L LGPEP + F+A YL K + +K +++ K Sbjct: 108 PRRFGAWLWTDNPETC-----SVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGIHPDRTAGSLNENDAA------ILVSVIKQVLQLSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG+ GEPC CG +I RSTF+C CQK Sbjct: 217 LRDFLQSDGKPGYFAQELRVYGRNGEPC-RTCGTLIETAKHGQRSTFFCRRCQK 269 >gi|330970964|gb|EGH71030.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL +I+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIQIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|1169728|sp|P42371|FPG_LACLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|433584|emb|CAA52351.1| formamidopyrimidine-DNA-glycosylase [Lactococcus lactis] Length = 273 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ + ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPRE----KHDHLTMKFADG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG +L+ T Y + +GPEP D F+ + K +K LL Q +VAG Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYDEDFDEKLFREKLRKSTKKIKPYLLEQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 LGNIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 SAL-GSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 272 >gi|329122967|ref|ZP_08251538.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] gi|327471898|gb|EGF17338.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] Length = 274 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 4 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 63 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 113 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 171 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 225 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 272 >gi|110643876|ref|YP_671606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] gi|122957892|sp|Q0TBH4|FPG_ECOL5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110345468|gb|ABG71705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] Length = 269 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 157/290 (54%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVEAIRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|229846005|ref|ZP_04466117.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] gi|229811009|gb|EEP46726.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] Length = 271 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAKYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|200388222|ref|ZP_03214834.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605320|gb|EDZ03865.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 269 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSL---STAECDLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|145632333|ref|ZP_01788068.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145634123|ref|ZP_01789834.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] gi|144987240|gb|EDJ93770.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145268567|gb|EDK08560.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] Length = 271 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 153/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ S +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQYSAID-----KHDHIDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + LGPEP + FNA YL + +K++ LK L++ +V G Sbjct: 109 RRFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|16272883|ref|NP_439106.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae Rd KW20] gi|260580035|ref|ZP_05847865.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] gi|1169727|sp|P44948|FPG_HAEIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1573970|gb|AAC22606.1| formamidopyrimidine-DNA glycosylase (fpg) [Haemophilus influenzae Rd KW20] gi|260093319|gb|EEW77252.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] Length = 271 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYTNESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|168232573|ref|ZP_02657631.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472197|ref|ZP_03078181.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458561|gb|EDX47400.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333284|gb|EDZ20048.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 269 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLVHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPIVATKHAQRATFYCRHCQK 269 >gi|322612892|gb|EFY09844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618957|gb|EFY15844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625266|gb|EFY22093.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630067|gb|EFY26840.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634258|gb|EFY30993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635841|gb|EFY32550.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643021|gb|EFY39598.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645051|gb|EFY41582.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649849|gb|EFY46272.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653056|gb|EFY49391.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661125|gb|EFY57353.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662386|gb|EFY58599.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667264|gb|EFY63430.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674359|gb|EFY70452.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678433|gb|EFY74494.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680939|gb|EFY76973.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687125|gb|EFY83098.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195849|gb|EFZ81021.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198234|gb|EFZ83340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200852|gb|EFZ85922.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206606|gb|EFZ91564.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210481|gb|EFZ95367.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216231|gb|EGA00959.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220454|gb|EGA04908.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225317|gb|EGA09551.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228431|gb|EGA12562.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234252|gb|EGA18340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237237|gb|EGA21304.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244756|gb|EGA28760.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245869|gb|EGA29859.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250948|gb|EGA34824.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257304|gb|EGA41003.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262228|gb|EGA45789.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264561|gb|EGA48065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268851|gb|EGA52309.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 269 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK +K L++ K+V G+ Sbjct: 110 RFG--TWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKMAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|262163760|ref|ZP_06031500.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] gi|262027740|gb|EEY46405.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] Length = 269 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWPIPQELKQ-LEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSL------GLDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|145628119|ref|ZP_01783920.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|145630040|ref|ZP_01785822.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145640614|ref|ZP_01796197.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|319775119|ref|YP_004137607.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] gi|144979894|gb|EDJ89553.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144984321|gb|EDJ91744.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145274540|gb|EDK14403.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] gi|317449710|emb|CBY85917.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] Length = 271 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|119503521|ref|ZP_01625604.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] gi|119460583|gb|EAW41675.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] Length = 269 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR+ A G++I+ RRAKYL Sbjct: 1 MPELPEVETTRRGIDPHAVDRCIERVVIRNAQLRWPIEDGLPALAAGQRILRTRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYND 118 LI+LE + +++VHLGMSGS I P P H+HV I L N+ N +Y ND Sbjct: 61 LIDLEHH-TLMVHLGMSGSLRI------MPASTPPMFHDHVDIVL-NDGNCLRY----ND 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + ++ + + LR LGPEP N F+ ++L + + +K L++ +IV Sbjct: 109 PRRFGSLHILTSD---DHALLRHLGPEPLSNDFDGVWLYEAARGRKAAVKQFLMDGRIVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI-DAIDAGGSSLR 237 G+GNIY EAL+ A + P R G I Y+ + E KVL+ AI+ GG++LR Sbjct: 166 GVGNIYANEALFMAGIRPTRSA-------GKISLIRYQRLAEAVKVLLAAAIERGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V DG GYF VYG+ + C + C ++ I RS+ +C CQ+ Sbjct: 219 DFVGGDGKPGYFAQELRVYGRGNQLCRA-CSGRLQEIRLGNRSSVFCPACQR 269 >gi|48474241|sp|Q9X981|FPG_SERMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16445331|gb|AAD28805.2| Fpg [Serratia marcescens] Length = 271 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 149/293 (50%), Gaps = 26/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILTLS-DQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE IIVHLGMSGS + + +H+HV + + N + Y DPR Sbjct: 60 LIELERGW-IIVHLGMSGSLRMLREENED--EAGKHDHVDLVINNGMILR-----YTDPR 111 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP +FN YL + K + +K L++ K+ Sbjct: 112 RFGAWLWCEDLATSSV------LAHLGPEPLSEAFNGDYLYEKSRNKRTLIKPWLMDNKL 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R SL + L + I+ VL +I+ GG++L Sbjct: 166 VVGVGNIYASESLFSAGILPDRPAGSLTKAEAA------LLAKTIKAVLQRSIEQGGTTL 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 220 RDFLQSDGKPGYFAQELQVYGRAGEPC-RTCGTPIESAKHGQRSTFFCRRCQR 271 >gi|205374552|ref|ZP_03227348.1| formamidopyrimidine-DNA glycosylase [Bacillus coahuilensis m4-4] Length = 274 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 152/291 (52%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V K + + + + + F+ A + I+DV RR K Sbjct: 1 MPELPEVETVRRTLKELIVGKKIIGVTVGWPKMIKKPEQVEQFTDALVDETIMDVHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L+IE + S++ HL M G + + E P H HV ++T+ + Y Sbjct: 61 FLIIET-SHYSLVSHLRMEGKYGVFEEKEELLP-----HTHVIFHFDDDTSLR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L +Y PL LGPEP F+ YL + K +K LL+Q IV Sbjct: 110 DVRKFGTMHLYTKGQEYLDKPLSELGPEPFSKEFHFNYLFEKLQKTERAIKAVLLDQTIV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV E L++A + P RK++++ +L +EI L A++AGGS++R Sbjct: 170 VGLGNIYVDEVLFKAGIDPERKSKTITLQETE------QLTREIVSTLTIAVEAGGSTIR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G +G +QN VYG+ E C CG I + V AGR T YC CQ Sbjct: 224 SYINSQGKVGTYQNQLFVYGRKDEAC-RVCGSPIYKKVTAGRGTHYCANCQ 273 >gi|319897563|ref|YP_004135760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] gi|317433069|emb|CBY81443.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] Length = 271 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGVHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|315653651|ref|ZP_07906571.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] gi|315489013|gb|EFU78655.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] Length = 276 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKISAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQ----KHEHVQFAFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P+ + Q D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIAQ------DSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|62182219|ref|YP_218636.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505480|sp|Q57IA7|FPG_SALCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|62129852|gb|AAX67555.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716707|gb|EFZ08278.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 269 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSGEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|57239162|ref|YP_180298.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|58579116|ref|YP_197328.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|57161241|emb|CAH58159.1| formamidopyrimidine-DNA glycosylase [Ehrlichia ruminantium str. Welgevonden] gi|58417742|emb|CAI26946.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] Length = 269 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++ + L + T+ I ++R +LR + +G I + R+ KY+ Sbjct: 1 MPELPEVEVVCKILSTKIVGKTILKIQINRYDLRTQITEKLADIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHDYITM-----KHNHVLFFFNDNQ-----ILVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ ++ + G +P ++FN YL F++K S +K+ L+N KI+ GI Sbjct: 111 RFGSLTLLTYEQYLEF--FKDFGIDPLSDNFNTEYLYSSFNRKTS-IKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFMAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q RSTF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCYI-CNNKISMIKQHSRSTFFCSHCQ 268 >gi|325685807|gb|EGD27880.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 273 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V+R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVNRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + T+ P+ +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHL--TTWDAPVD--KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E +W+++++P L N KD + L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVIWQSRINP------LTPANELTKDQVKCLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|56459356|ref|YP_154637.1| formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] gi|81678420|sp|Q5QZC1|FPG_IDILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56178366|gb|AAV81088.1| Formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] Length = 270 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ T+ + +H K LR+ P G + VSRR+KYL Sbjct: 1 MPELPEVEVSRLGISPHIEGRTIKSVKVHDKRLRWPVPETVHKV-EGHVLRSVSRRSKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + N +I+HLGMSG + + +H+H+ I N + NDPR Sbjct: 60 LLQTD-NGCLILHLGMSGKLRV----VPAETTHYKHDHIDIEFDNGQTLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E+ + + L LGPEP ++FN YL + ++ ++K L++ K+V G+ Sbjct: 110 RFGALLYSESDVS-GHELLSQLGPEPLTDAFNIDYLFERSRGRSQSVKTFLMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL++A ++P R G + Y KL+ I++ L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFKAGINPKRAA-------GKISKVRYQKLVPIIKETLASAIELGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF VYG+ G+ C+ C ++ + RST YCT CQ+ Sbjct: 222 TQVDGNPGYFAQKLQVYGRGGKLCMV-CSNRLKEVRLGQRSTVYCTQCQR 270 >gi|293393616|ref|ZP_06637926.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] gi|291423951|gb|EFE97170.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] Length = 269 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 155/292 (53%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALS-DRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIELDHGW-IIVHLGMSGSLRM----LAEESEAGKHDHVDLVMSNGMILR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +++ L LGPEP +F+ YL + K + +K L++ K+ Sbjct: 110 RFGAWLWCDDLAASNV------LAHLGPEPLSEAFDGQYLFDKSRNKRTLIKPWLMDNKL 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R+ SL + D+L + I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFTAGILPDRQAGSLTRAEA---DLL---AETIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD++ DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 218 RDFLQSDGKPGYFAQELQVYGRAGEPC-RVCGTPIESAKHGQRSTFFCRRCQ 268 >gi|251793910|ref|YP_003008642.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter aphrophilus NJ8700] gi|247535309|gb|ACS98555.1| heptosyltransferase family [Aggregatibacter aphrophilus NJ8700] Length = 271 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYIIEKIVVRQPKLRWAVSPELTEFHH-VKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSG+ I+ H S PI +H+H+ I + N + YNDP Sbjct: 60 IIHSEQGY-IIGHLGMSGTVRIVPHDS---PID--KHDHLDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T ++ LGPEP + FNA YL + KK + LK L++ +V G Sbjct: 109 RRFGAW--LWTKKLDEFHLFLKLGPEPLSDEFNADYLFKKSRKKMTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ L P++ +L +N +L+ I+ VL AI+ GG++L+D+ Sbjct: 167 VGNIYANESLFLCSLHPMKLVANLTRNQCE------RLVDTIKSVLAKAIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I ++ R++FYC CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PRCGTKIESLIIGQRNSFYCPMCQK 269 >gi|296132484|ref|YP_003639731.1| formamidopyrimidine-DNA glycosylase [Thermincola sp. JR] gi|296031062|gb|ADG81830.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR] Length = 275 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 160/291 (54%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R+L ++ K++ DI + K ++ F G++I+++ RR K Sbjct: 1 MPELPEVETVKRSLEEKLLGKSIQHVDIFMD-KVIKEPSVEEFQQILAGREILNLGRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L G +I+ HL M+G I + + +H H+ L+++ + + D Sbjct: 60 YLLLYLSGGYAIVFHLRMTGQLIYSERTAVRA----KHTHLVFHLSDDNELR-----FTD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L+ + LRT+G EP F +L + +K + +K LL+Q +A Sbjct: 111 QRQFGRVYLLPDDQLDKITGLRTMGVEPLTEEFTKEFLKKELKRKRTKIKALLLDQTFIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+RAK++P R +L Q + +L + I +VL + I+ G+S++D Sbjct: 171 GIGNIYADEALFRAKINPERLASTLNQRE------ISRLHRAIVEVLTEGIENRGTSIKD 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q+ VYGK +PC CG +I R GRS++YC CQK Sbjct: 225 YVDGEGKSGNYQDLLKVYGKEEKPC-PVCGSVILRKKIGGRSSYYCGRCQK 274 >gi|229527276|ref|ZP_04416669.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] gi|229335284|gb|EEO00768.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] Length = 269 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAYSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL +CG++I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPCL-HCGELICEQKIAQRNTFFCPQCQ 268 >gi|251791515|ref|YP_003006236.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] gi|247540136|gb|ACT08757.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] Length = 269 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 153/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + T++ + LR+ P S + ++ V RRAKY Sbjct: 1 MPELPEVETSRRGISPWLVGHTISYAEVRNARLRWPVSPEILSLSD--VPVLSVQRRAKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLIEL IIVHLGMSGS + C +P K H+HV + + + + Y DP Sbjct: 59 LLIELPTGW-IIVHLGMSGSLRVLPEYC-EPEK---HDHVDLIMDSGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L LGPEP + F+ YL Q + + +K +++ K+V G Sbjct: 109 RRFGAWLWCDDPATSSV--LAHLGPEPLSDDFSGDYLFKQSRGRKTPVKLWIMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL Q +L I++VL +I+ GG++LRD+ Sbjct: 167 VGNIYASESLFNAGILPERLAGSLSQAEAD------QLAHSIKQVLQRSIEQGGTTLRDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ G+PC +CG +I I Q RSTF+C CQ+ Sbjct: 221 LQSDGKPGYFAQELQVYGRGGQPC-HHCGTLIDSIKQGQRSTFFCKRCQR 269 >gi|77461572|ref|YP_351079.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf0-1] gi|90101312|sp|Q3K566|FPG_PSEPF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77385575|gb|ABA77088.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----MPAAKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSNDPLNHEL--LIRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAK------GISRARYLKLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R + R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEHC-KVCGTGLREMKLGQRASVWCPRCQ 269 >gi|148826404|ref|YP_001291157.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|166215625|sp|A5UDC3|FPG_HAEIE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148716564|gb|ABQ98774.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|309973552|gb|ADO96753.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2846] Length = 271 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ S +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQNSAID-----KHDHIDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + LGPEP + FNA YL + +K++ LK L++ +V G Sbjct: 109 RRFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P++ ++L N + L+ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFICGIHPLKLAKNLTLNQ------CFSLVNTIKDVLRKAIIQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|319745430|gb|EFV97736.1| DNA-formamidopyrimidine glycosylase [Streptococcus agalactiae ATCC 13813] Length = 273 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + ++F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNNFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G + ++ HL M G +++ + + +H H+ LTN + ++Y D R Sbjct: 61 LFDF-GEMVMVSHLRMEGKYLL----FPNKVPDNKHFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R L ++ + +L+K EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEALWAAKIHPQRLANQLTESETS---LLHK---EIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|227503343|ref|ZP_03933392.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] gi|227075846|gb|EEI13809.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/301 (34%), Positives = 154/301 (51%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R + +V K +T DI R N D P + GK+I +RR K Sbjct: 1 MPELPEVESVRHGVESYVVGKEITSVDIAHPRANRGQDEP--LAGLIVGKEIAAAARRGK 58 Query: 59 YLLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +E G + +HLGMSG I HT + H +T+ L++ T Sbjct: 59 FMWLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHT-------DSPHRRITVVLSDATELH- 110 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTL---GPEPADNSFNAIYLTHQFHKKNSNLK 168 + D R FG+ + Y P T+ G +P + F+ + KK + +K Sbjct: 111 ----FVDQRTFGY---------WLYAPWSTISHIGLDPLEPDFDIASAARRLRKKKTAVK 157 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A Sbjct: 158 TALLDQTLVSGIGNIYADEALWAARISPRKKASALRQKDAV------ALLAAAQTVMSAA 211 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + AGG+S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +C Sbjct: 212 LKAGGTSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|300705247|ref|YP_003746850.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] gi|299072911|emb|CBJ44267.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] Length = 288 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 151/300 (50%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + + ++VHLGM+G+ + P+ H+H+ I L + + Sbjct: 61 LIECVPDAAREPRAVAGWLLVHLGMTGTLRVLEV----PVAPGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + G P+ L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRI----GRPR--YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|224585526|ref|YP_002639325.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254789450|sp|C0Q1W8|FPG_SALPC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|224470054|gb|ACN47884.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 269 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFP 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|323975145|gb|EGB70250.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10509] Length = 269 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 157/290 (54%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I ++ + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIMATKHAQRATFYCRQCQK 269 >gi|323965901|gb|EGB61349.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M863] gi|327250761|gb|EGE62463.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_7v] Length = 269 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 157/290 (54%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYCLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I ++ + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|209519647|ref|ZP_03268437.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] gi|209499933|gb|EDZ99998.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] Length = 276 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 150/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTAALRWPIPADLAKILRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E++ IVHLGM+G+ ++ H P +H+HV + + + Y DP Sbjct: 61 LFEIDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHVDWIFDD------FILRYRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E ++P L +LG EP +F + + ++K ALL IV Sbjct: 112 RRFGAVLWHPREEGDILEHPLLASLGAEPFSPAFTGALMYRLTRGRKVSVKQALLAGDIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y+L+ + +V L AID GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRPT-------TAAGRVSLVRYELLADAVRVTLAAAIDKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V DG GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 225 RDFVGSDGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|50083930|ref|YP_045440.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] gi|81695930|sp|Q6FE90|FPG_ACIAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49529906|emb|CAG67618.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] Length = 272 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ N V + + LR+ P S G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLL-NQRVKSVQVRDSRLRWPIPEDISRLA-GQRLTSLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + + A ++ +H+H+ ++ + T + Y+DPR Sbjct: 59 LAEFETD-QMLWHLGMSGSFRV--ATAADELR--KHDHLILTFDDGTELR-----YHDPR 108 Query: 121 RFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L E S Q L LGPEP FNA YL + K +K AL++ +V G Sbjct: 109 RFGCILWLNEES---QSKLLNPLGPEPLSEDFNADYLYQKLKSKQVGIKIALMDNHVVVG 165 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P + SL K + L+QEI+++L AI+ GGS+LRDY Sbjct: 166 VGNIYATESLFNLGIHPAQPASSL------SKPQILALVQEIKRILKFAIELGGSTLRDY 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 TNAMGENGYFQQTLLAYGRAGEMCV-NCETPLENLKLGQRASVFCPQCQ 267 >gi|229843992|ref|ZP_04464133.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] gi|229812986|gb|EEP48674.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] Length = 271 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEEL-ITLKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVINNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CISLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|145638232|ref|ZP_01793842.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272561|gb|EDK12468.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751387|gb|ADO81371.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2866] Length = 271 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ S +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID-----KHDHIDIVVNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + LGPEP + FNA YL + +K++ LK L++ +V G Sbjct: 109 RRFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFICGIHPLKLAKNLTRNQ------CISLVNTIKDVLRKAIIQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|37912918|gb|AAR05254.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine proteobacterium ANT32C12] Length = 269 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 161/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ +H +NLR+ +F + T+ + I +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINKFSQS-TLKSTKIHNRNLRWKVVENFESLTKNQSINKISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ N++II+HLGMSGS I + +K H+H + +++YNDPR Sbjct: 60 IFHLD-NINIILHLGMSGSLRISKNNDNFFLK---HDHAEFIFD------EEKIVYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + +++ ++ LGPEP FN L K N+K+ L+NQK V GI Sbjct: 110 RFGSIHLADNLDEHRL--IKNLGPEPLSKDFNPNDLHKITAKSKINIKSLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A+++P R L T +D K+ +K+L AI GG++L+D+ Sbjct: 168 GNIYASESLYLAQINPNRVASDL-----TIED-CKKITLSAKKILNAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ + YG+ G C C +I ++V R+TF+C CQ Sbjct: 222 SADGSPGYFKFELNAYGREGLEC-KKCKTLITKVVINTRATFFCGSCQ 268 >gi|149925769|ref|ZP_01914033.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] gi|149825886|gb|EDM85094.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] Length = 272 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 158/292 (54%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID-VSRRAKY 59 MPELPEVEI +R + + + + + LR+ + K+I+ V RR+KY Sbjct: 1 MPELPEVEITKRGVDLHFTGQRLLACTVRQPRLRWPVSTQVQSCV--KQILQAVERRSKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L++ G + ++VHLGMSGS I S + P +H+H+ + + + YNDP Sbjct: 59 MLMDFGGQV-LVVHLGMSGSMKI--VSASTPWD--KHDHIEWNFGDKV------LRYNDP 107 Query: 120 RRFGFMDLVETSLKYQYPPLR--TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG ++ VE + ++ +R LGPEP ++F K ++K LL+ V Sbjct: 108 RRFGSVEYVEKAPGWEDSFVRFAKLGPEPFSDAFTPESFFKATRGKKVSIKALLLSGFAV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY CEAL+R+ + P + L + N L + VL +AI+ GGS+LR Sbjct: 168 VGVGNIYACEALFRSAIRPGKAAGRLSRANAQ------ALHAAVVAVLTEAIERGGSTLR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ IDG +G+FQ VYG+ G+PC CG +++R V RSTFYC CQ+ Sbjct: 222 NFQAIDGELGHFQLHCDVYGREGQPC-KRCGALVKRRVMNQRSTFYCAQCQE 272 >gi|260581780|ref|ZP_05849577.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] gi|260095373|gb|EEW79264.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] Length = 271 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEEL-ITLKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVMNNGKLLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CISLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIEQRNSFFCPKCQK 269 >gi|331659955|ref|ZP_08360893.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] gi|222035343|emb|CAP78088.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli LF82] gi|312948196|gb|ADR29023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O83:H1 str. NRG 857C] gi|315297030|gb|EFU56310.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 16-3] gi|331053170|gb|EGI25203.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] Length = 269 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLAGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|51247145|pdb|1PJI|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A 1,3 Propanediol Containing Dna gi|51247149|pdb|1PM5|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A Tetrahydrofuran Containing Dna gi|75765461|pdb|1XC8|A Chain A, Crystal Structure Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|218681752|pdb|3C58|A Chain A, Crystal Structure Of A Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A N7-Benzyl-Fapy-Dg Containing Dna Length = 271 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 1 PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLI 60 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 E+ + +I HL M G + + + +H+H+T+ + ++IY D R+ Sbjct: 61 FEIGDDFRLISHLRMEGKYRLATLDAPRE----KHDHLTMKFADG------QLIYADVRK 110 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+G Sbjct: 111 FGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLG 170 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 NIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTYSA 224 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 L-GSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|114565074|ref|YP_752588.1| formamidopyrimidine-DNA glycosylase [Shewanella frigidimarina NCIMB 400] gi|114336367|gb|ABI73749.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella frigidimarina NCIMB 400] Length = 271 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV+++ + +LR+ P + G++I +V RRAKYL Sbjct: 1 MPELPEVEVTRLGISPYLIEQTVSELIVRNASLRWPVPA-IAQNIVGQRITNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I VHLGMSGS I + PI+ +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGMTI-VHLGMSGSLRILPRNT--PIE--KHDHIDLVLENGRMLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP F + L K +K L++ IV G Sbjct: 110 RFGAWLWYELP-EEAHPLLSKLGPEPLSPHFTPLQLQAALAGKKKAIKLCLMDNHIVVGA 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ L L+ E++++L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAAAGSIDLER------LTILVSEVKQILAHAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TACGNLLSEIKLGQRTTVFCGLCQQ 270 >gi|218702401|ref|YP_002410030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI39] gi|226706480|sp|B7NPE1|FPG_ECO7I RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218372387|emb|CAR20261.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 269 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|26250281|ref|NP_756321.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227883803|ref|ZP_04001608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300984965|ref|ZP_07177217.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|301018964|ref|ZP_07183187.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|29611716|sp|Q8FC87|FPG_ECOL6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|26110711|gb|AAN82895.1|AE016769_10 Formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227839081|gb|EEJ49547.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300399458|gb|EFJ82996.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|300408245|gb|EFJ91783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|307555734|gb|ADN48509.1| formamidopyrimidine DNA glycosylase [Escherichia coli ABU 83972] gi|315292972|gb|EFU52324.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 153-1] Length = 269 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|90415302|ref|ZP_01223236.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] gi|90332625|gb|EAS47795.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] Length = 268 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + ++ +LR+ S T+G+ ++ ++RRAKYL Sbjct: 1 MPELPEVETTLRGVAPHIVDQVIDQLRVYNGSLRWPVTQGISELTQGQLVVAITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE ++++HLGMSGS + S +P + +H+H+ + + N + Y+DPR Sbjct: 61 LVELERG-TMMIHLGMSGSLRLVDRS--EPRR--KHDHIEMLMANGACLR-----YHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YP L LGPEP + F L K+ +K +++ + V G+ Sbjct: 111 RFGAWLWSDSG----YPQLDHLGPEPLTDDFTGKRLFELSRKRKMAIKPFIMDNRTVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKT-RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+R + P R R +Q +L I++VL AI GG++LRD+ Sbjct: 167 GNIYASEALFRGGIRPDRAAGRVSLQR-------YEELAGHIKEVLASAITQGGTTLRDF 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ +G GYFQ VYG+ GEPC+ +C + ++ I RS+ +C CQ+ Sbjct: 220 VNGNGEPGYFQQTLMVYGRGGEPCV-HCDKPLKDIRLGQRSSVFCPACQR 268 >gi|307251263|ref|ZP_07533184.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856779|gb|EFM88914.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 273 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQSE------RLVKVIKEVLTKAISQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|331675115|ref|ZP_08375872.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] gi|331068024|gb|EGI39422.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] Length = 269 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEEFPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL L Q I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSLSLAE------CELLTQVIKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|300692626|ref|YP_003753621.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] gi|299079686|emb|CBJ52363.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] Length = 288 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 149/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVTRVLRRGKYL 60 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + + ++VHLGM+G+ + T P+ H+H+ I L + + Sbjct: 61 LIECVPDAAREPLAVAGWLLVHLGMTGTLRVLET----PVAPGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSAHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|238028664|ref|YP_002912895.1| formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] gi|237877858|gb|ACR30191.1| Formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] Length = 275 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 156/291 (53%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + +AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVTGRRVRRVDVRTATLRWPVPDNLAAALEAREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +P + +H+H I + ++R DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV--LPGGEPPEARKHDH--IDWVFDECVLRFR----DPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E+ +++P L +LG EP F L + + ++K ALL IV Sbjct: 112 RFGAVLWHARESGDIHRHPLLTSLGVEPFSPLFTPELLFRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YQRLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|77166106|ref|YP_344631.1| DNA-formamidopyrimidine glycosylase [Nitrosococcus oceani ATCC 19707] gi|254436060|ref|ZP_05049567.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] gi|90101306|sp|Q3J7U5|FPG_NITOC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|76884420|gb|ABA59101.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani ATCC 19707] gi|207089171|gb|EDZ66443.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] Length = 271 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLSLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II+HLGMSGS + T+ + +H+H+ I L N + +NDPR Sbjct: 61 LLSCTQG-TIILHLGMSGSLRLVTTN----TPHGKHDHLDIVLNNGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP ++ F+ YL + +++K ++N +IVAG+ Sbjct: 111 RFGSVSWTQAN-PLHHPLLEILGPEPLESLFDGHYLFKHSRHRRTSVKAFIMNHRIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R++ S I G + +L + + VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHP-RRSASRI---GLAR--YQRLAETTKTVLYNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF N +YG++ PC CG IR R+++YCT CQ Sbjct: 224 TSDGKPGYFANQLQIYGRSAHPC-PICGTPIRLERIGQRASYYCTQCQ 270 >gi|163847434|ref|YP_001635478.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] gi|189044586|sp|A9WDC2|FPG_CHLAA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163668723|gb|ABY35089.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] Length = 278 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L ++ T+T + L + P F+A G++I + RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTPSPDEFAALIAGRRIEAIGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G ++ +HL MSG ++ ++ +H H + L N R+I+ND Sbjct: 61 LLLSLDGEWTLAIHLRMSGQLLVAEPETSEA----RHVHFALDLDNGR-----RLIFNDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++ + GPEP F L + + + +K LL+Q ++AG Sbjct: 112 RKFGRVHLLDRQGLAALDAVH--GPEPLAADFTPSALAERLQNRRAPIKALLLDQHLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A++ P+ L TP+ I +L I+ VL +AI GSSLR+Y Sbjct: 170 IGNIYANEALWLARIHPLTPGAML-----TPEQI-NELHHAIRHVLQEAITNQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q F+VY + GEPC C I RIV A RST++C CQ Sbjct: 224 RDGYGRQGTQQEHFNVYDRAGEPC-PRCQSTIERIVVAQRSTYFCPTCQ 271 >gi|253690458|ref|YP_003019648.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259647146|sp|C6DIB8|FPG_PECCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|251757036|gb|ACT15112.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 269 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 154/294 (52%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNTRLRWPVSGEILSLS-DEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS + E++ K H+HV + + + + Y D Sbjct: 60 LIELTRGW-IIVHLGMSGSLRVLPEYSEPEK------HDHVDLVMDSGKVLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D ET L LGPEP + F+A YL K + +K +++ K Sbjct: 108 PRRFGAWLWTDNPETC-----SVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGIHPDRAAGSLNENDAA------VLVSVIKQVLQLSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 217 LRDFLQSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQK 269 >gi|319788474|ref|YP_004147949.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] gi|317466986|gb|ADV28718.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] Length = 271 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 161/292 (55%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ VT + L R +LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHVEGRRVTTVTLRRPDLRWPIPREVVEELPGRRIAAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI-YN 117 L++ + S ++HLGMSG + P + P H+HV ISL + RV+ + Sbjct: 61 LLDTDRGDSALLHLGMSGMLRV------LPPETPVNTHDHVDISLDSG------RVLRFT 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + ++ L+ LGPEP F+ +L + +++ +K L++Q+IV Sbjct: 109 DPRRFGCLLWQPAGTVHEL--LQDLGPEPLSGDFDGDWLYARSRGRSAPVKAFLMDQRIV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+RA +SP+R + + L ++++L AI GG++LR Sbjct: 167 VGVGNIYAAESLFRAGISPLRAAGKVSRAR------YIALADAVKEILGYAITRGGTTLR 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+++ DG+ GYF+ +VYG+ G PC + CG +R R++ +C CQ+ Sbjct: 221 DFLNPDGAPGYFEQELAVYGRGGLPCPA-CGTPLREASIGQRTSAWCPRCQR 271 >gi|193070399|ref|ZP_03051341.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] gi|192956338|gb|EDV86799.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] Length = 269 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILRAVVRNGRLRWPVSEELYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|307133078|ref|YP_003885094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] gi|306530607|gb|ADN00538.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] Length = 269 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 154/292 (52%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + T+ + LR+ P S + ++ V RRAKY Sbjct: 1 MPELPEVETSRRGISPWLVGHTILYAEVRNARLRWPVSPEILSLSD--TPVLSVQRRAKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LLIEL IIVHLGMSGS + E++ K H+HV + + + + Y Sbjct: 59 LLIELPTGW-IIVHLGMSGSLRVLPEYSEPDK------HDHVDLVMDSGKVLR-----YT 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + L LGPEP + F+ YL Q + + +K +++ K+V Sbjct: 107 DPRRFGAWLWCDDPATSSV--LAHLGPEPLSDDFSGRYLFAQSRGRKTPIKLWIMDNKLV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL + +L++ I++VL +I+ GG++LR Sbjct: 165 VGVGNIYASESLFNAGVLPNRPAGSLSEVEAD------QLVRSIKQVLQRSIEQGGTTLR 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYF VYG++GEPC +CG I I Q RSTF+C CQ+ Sbjct: 219 DFLQSDGKPGYFAQELQVYGRSGEPC-HHCGTPIESIKQGQRSTFFCKCCQR 269 >gi|83720571|ref|YP_441036.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|167579767|ref|ZP_02372641.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis TXDOH] gi|167617843|ref|ZP_02386474.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis Bt4] gi|257140311|ref|ZP_05588573.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|123538059|sp|Q2T1B3|FPG_BURTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83654396|gb|ABC38459.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] Length = 276 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 150/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPADFAEMLRSREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+HV ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPP-PAPAKHDHVDWVF------DEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVRAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST+YC CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYYCPNCQR 276 >gi|226942502|ref|YP_002797575.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] gi|226717429|gb|ACO76600.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] Length = 282 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V + + + LR+ P G++I V RRAKYL Sbjct: 13 MPELPEVETTRRGIAPHLVGQRVERVVVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL 72 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 73 LIRAEAG-TLIGHLGMSGSLRLVEAG----LPAVRHEHVDILLESGLALR-----YTDPR 122 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+++ LR LGPEP F+ L K+ +K +++ +V G+ Sbjct: 123 RFGALLWSADPLEHEL--LRRLGPEPLGEDFDGERLYRLSRGKSVAVKPFIMDNAVVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 181 GNIYASEALFAAGIDPRRAAGSVSRAR------YRRLAEEIRRILAQAIECGGTTLRDFV 234 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG + + R++ YC CQ+ Sbjct: 235 GGDGKPGYFQQTLLVYGRGGEFC-KVCGSTLHEVRLGQRASVYCGRCQR 282 >gi|288942769|ref|YP_003445009.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] gi|288898141|gb|ADC63977.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] Length = 277 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR P G+ I + RR+KYL Sbjct: 1 MPELPEVETTLRGIRPHLEGRRIARLIVRNPRLRQPIPPEMPERVAGQPIRSLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI LE S++VHLGMSGS + + P+ H+H+ + L++ + ++DPR Sbjct: 61 LIGLEHG-SLLVHLGMSGSLRV--VTAESPLPPRTHDHLDLVLSDGGILR-----FHDPR 112 Query: 121 RFGFMDLVETSLK---YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + S + ++P L LGPEP +N F+ +L + +K+ +++ +V Sbjct: 113 RFGIFLWIPMSPEIALVEHPLLCRLGPEPLENDFDGEHLYRSSRSRRVAVKSFIMDSAVV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A L P R + Q +L + I++VL +I+ GG++LR Sbjct: 173 VGVGNIYASESLFLAGLHPARACNRIDQGG------YGRLAETIRRVLRASIEQGGTTLR 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V+ G+ GYF + VYG+ GEPC CG I RS+FYC CQ Sbjct: 227 DFVNETGAPGYFAQSLRVYGRAGEPC-RICGTRIEPQRIGQRSSFYCPRCQ 276 >gi|251795551|ref|YP_003010282.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] gi|247543177|gb|ACT00196.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] Length = 287 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 156/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++ K + ++ L R R P F A G+ I V RR K Sbjct: 1 MPELPEVETVRRTLIELVAGKRIASVEVKLPRIIQRPAEPEAFEMALAGRTIQTVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + ++G L ++ HL M G + + + +P++ H HV + T+ + Y D Sbjct: 61 FLRVVMDG-LVLVSHLRMEGRYGVFPSD--EPVE--LHTHVLFHFDDGTDLR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M L E +++ PL LG EP +N +F A L KK +K LLNQ+ V Sbjct: 111 VRQFGTMHLFEPGTEFEMKPLSKLGLEPLENEAFTADALKGLLGKKTGLIKPLLLNQEYV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL+ A + P R SL K +L + I L A+ AGGSS++ Sbjct: 171 VGLGNIYVDEALFLAGIHPERTADSL------KKAEWIRLHEAIVSTLAKAVAAGGSSIK 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+ VYG+ EPC ++CG++I + V GR T C CQ Sbjct: 225 SYVNGQGEMGMFQHQLLVYGRKDEPC-ASCGRLIEKSVVGGRGTHTCASCQ 274 >gi|193063825|ref|ZP_03044912.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194430623|ref|ZP_03063077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218697356|ref|YP_002405023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 55989] gi|260846600|ref|YP_003224378.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|307314280|ref|ZP_07593888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|254789437|sp|B7L758|FPG_ECO55 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192930540|gb|EDV83147.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194411335|gb|EDX27703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218354088|emb|CAV00637.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|257761747|dbj|BAI33244.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|306906103|gb|EFN36622.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|315062923|gb|ADT77250.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323160757|gb|EFZ46693.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E128010] gi|323182663|gb|EFZ68066.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1357] gi|323376484|gb|ADX48752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KO11] Length = 269 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVELVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|88658566|ref|YP_507413.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] gi|88600023|gb|ABD45492.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] Length = 270 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 157/290 (54%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ R L + T+ DI ++R +LR + + V R+ KY+ Sbjct: 1 MPELPEVEIVCRALSSQILGKTILDIEVNRYDLRVPVTQNLCDIAVNSSVFQVLRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L +++HLGMSG+ I + IK +HNHV +NN +I+NDPR Sbjct: 61 VLVLSNQYYLVIHLGMSGNLIYSESY----IKQKKHNHVIFHFSNNN-----LLIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ S ++ + G + + FN YL + +K+ +K+ L+N K V GI Sbjct: 112 RFGIVILLTYSQYIEF--FKNFGVDALSDEFNTNYLYNTSNKR-CTIKSLLMNNKFVTGI 168 Query: 181 GNIYVCEALWRAKLSPIR--KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E+L+ A ++P R K S+I+ N +I ++ +L+ +I+ GGSS++D Sbjct: 169 GNIYSTESLFLAGIAPNRFVKDLSIIECN--------NIIDGVKNILLYSIENGGSSIKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G G FQN F VY +T + C C I I Q GRSTF+C YCQ Sbjct: 221 YTSPFGIRGTFQNHFLVYNRTRQQCYK-CNSSILVIKQNGRSTFFCPYCQ 269 >gi|15804176|ref|NP_290215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 EDL933] gi|15833764|ref|NP_312537.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30065089|ref|NP_839260.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56480390|ref|NP_709414.2| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 301] gi|74314131|ref|YP_312550.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei Ss046] gi|82545998|ref|YP_409945.1| formamidopyrimidine-DNA glycosylase [Shigella boydii Sb227] gi|91213151|ref|YP_543137.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UTI89] gi|110807687|ref|YP_691207.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5 str. 8401] gi|117625909|ref|YP_859232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157158292|ref|YP_001465115.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|168748717|ref|ZP_02773739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|168753459|ref|ZP_02778466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|168759732|ref|ZP_02784739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|168766055|ref|ZP_02791062.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|168772399|ref|ZP_02797406.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|168779790|ref|ZP_02804797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|168785511|ref|ZP_02810518.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|170018135|ref|YP_001723089.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170684053|ref|YP_001745935.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187731323|ref|YP_001882332.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|188491930|ref|ZP_02999200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|191167823|ref|ZP_03029629.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|191170358|ref|ZP_03031911.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194430989|ref|ZP_03063282.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|195936196|ref|ZP_03081578.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4024] gi|208814029|ref|ZP_03255358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208820753|ref|ZP_03261073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209398868|ref|YP_002273113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209921106|ref|YP_002295190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SE11] gi|215488914|ref|YP_002331345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217324519|ref|ZP_03440603.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218551163|ref|YP_002384954.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218556197|ref|YP_002389110.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI1] gi|218560707|ref|YP_002393620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S88] gi|218691919|ref|YP_002400131.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ED1a] gi|218707269|ref|YP_002414788.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMN026] gi|237703405|ref|ZP_04533886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254038834|ref|ZP_04872886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|254795590|ref|YP_003080427.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|260857970|ref|YP_003231861.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260870365|ref|YP_003236767.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|261224182|ref|ZP_05938463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254793|ref|ZP_05947326.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK966] gi|291285006|ref|YP_003501824.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|293407258|ref|ZP_06651182.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|293413069|ref|ZP_06655737.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|293417096|ref|ZP_06659723.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|298383004|ref|ZP_06992599.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300815126|ref|ZP_07095351.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300822405|ref|ZP_07102545.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300898569|ref|ZP_07116900.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300907676|ref|ZP_07125304.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300919798|ref|ZP_07136273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300983558|ref|ZP_07176650.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|301303868|ref|ZP_07209987.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|306816017|ref|ZP_07450155.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|309797624|ref|ZP_07692012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|312968024|ref|ZP_07782235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|331649450|ref|ZP_08350536.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331670475|ref|ZP_08371314.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331679726|ref|ZP_08380396.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|54037117|sp|P64149|FPG_SHIFL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040771|sp|P64148|FPG_ECO57 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101316|sp|Q31UZ1|FPG_SHIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101318|sp|Q3YVZ7|FPG_SHISS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122421890|sp|Q1R4V8|FPG_ECOUT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122957052|sp|Q0SYG3|FPG_SHIF8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215623|sp|A1AHG8|FPG_ECOK1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988459|sp|A7ZTI6|FPG_ECO24 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044588|sp|B1IZF8|FPG_ECOLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706479|sp|B7MFJ6|FPG_ECO45 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706481|sp|B7M4B9|FPG_ECO8A RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706482|sp|B7NET9|FPG_ECOLU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706483|sp|B1LK72|FPG_ECOSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706484|sp|B7LVJ6|FPG_ESCF3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066643|sp|B5YWD3|FPG_ECO5E RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066644|sp|B6I3L2|FPG_ECOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691677|sp|B2TTU9|FPG_SHIB3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789436|sp|B7ULJ0|FPG_ECO27 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789438|sp|B7N2X1|FPG_ECO81 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12518391|gb|AAG58779.1|AE005591_3 formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. EDL933] gi|13363985|dbj|BAB37933.1| formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30043350|gb|AAP19071.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56383941|gb|AAN45121.2| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 301] gi|73857608|gb|AAZ90315.1| formamidopyrimidine DNA glycosylase [Shigella sonnei Ss046] gi|81247409|gb|ABB68117.1| formamidopyrimidine DNA glycosylase [Shigella boydii Sb227] gi|91074725|gb|ABE09606.1| formamidopyrimidine DNA glycosylase [Escherichia coli UTI89] gi|110617235|gb|ABF05902.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 5 str. 8401] gi|115515033|gb|ABJ03108.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157080322|gb|ABV20030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|169753063|gb|ACA75762.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170521771|gb|ACB19949.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187428315|gb|ACD07589.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|187771367|gb|EDU35211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|188016969|gb|EDU55091.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|188487129|gb|EDU62232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|189002553|gb|EDU71539.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|189358964|gb|EDU77383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|189364460|gb|EDU82879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|189369599|gb|EDU88015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|189374639|gb|EDU93055.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|190902166|gb|EDV61909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|190909166|gb|EDV68752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194420444|gb|EDX36520.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|208735306|gb|EDZ83993.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208740876|gb|EDZ88558.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209160268|gb|ACI37701.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209754668|gb|ACI75646.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754670|gb|ACI75647.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754672|gb|ACI75648.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754674|gb|ACI75649.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754676|gb|ACI75650.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209914365|dbj|BAG79439.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE11] gi|215266986|emb|CAS11431.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217320740|gb|EEC29164.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218358704|emb|CAQ91360.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218362965|emb|CAR00602.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|218367476|emb|CAR05258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218429483|emb|CAV17991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|218434366|emb|CAR15290.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|226838799|gb|EEH70826.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|226902669|gb|EEH88928.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254594990|gb|ACT74351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|257756619|dbj|BAI28121.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257766721|dbj|BAI38216.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|281180681|dbj|BAI57011.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE15] gi|281602998|gb|ADA75982.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri 2002017] gi|284923668|emb|CBG36765.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 042] gi|290764879|gb|ADD58840.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|291426069|gb|EFE99103.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|291431127|gb|EFF04120.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|291468716|gb|EFF11209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|294492817|gb|ADE91573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IHE3034] gi|298276840|gb|EFI18358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300306882|gb|EFJ61402.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|300357755|gb|EFJ73625.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300400612|gb|EFJ84150.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300413151|gb|EFJ96461.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300525052|gb|EFK46121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300532018|gb|EFK53080.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300840831|gb|EFK68591.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|305850413|gb|EFM50870.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|307628708|gb|ADN73012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UM146] gi|308118811|gb|EFO56073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|309704037|emb|CBJ03383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ETEC H10407] gi|312287283|gb|EFR15192.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|313647491|gb|EFS11941.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|315254021|gb|EFU33989.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 85-1] gi|315285378|gb|EFU44823.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 110-3] gi|320176306|gb|EFW51366.1| Formamidopyrimidine-DNA glycosylase [Shigella dysenteriae CDC 74-1112] gi|320179971|gb|EFW54913.1| Formamidopyrimidine-DNA glycosylase [Shigella boydii ATCC 9905] gi|320186825|gb|EFW61545.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri CDC 796-83] gi|320191314|gb|EFW65964.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC1212] gi|320193858|gb|EFW68491.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli WV_060327] gi|320201340|gb|EFW75921.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli EC4100B] gi|320639542|gb|EFX09150.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. G5101] gi|320644981|gb|EFX14011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. 493-89] gi|320650248|gb|EFX18737.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. H 2687] gi|320655600|gb|EFX23528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661334|gb|EFX28758.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. USDA 5905] gi|320666348|gb|EFX33347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. LSU-61] gi|323155286|gb|EFZ41469.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa14] gi|323166882|gb|EFZ52621.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 53G] gi|323179395|gb|EFZ64962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1180] gi|323944088|gb|EGB40168.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H120] gi|323949874|gb|EGB45758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H252] gi|323954825|gb|EGB50605.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H263] gi|324008140|gb|EGB77359.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 57-2] gi|324012605|gb|EGB81824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 60-1] gi|324019744|gb|EGB88963.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 117-3] gi|324111529|gb|EGC05510.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii B253] gi|324116026|gb|EGC09952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1167] gi|325499442|gb|EGC97301.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ECD227] gi|326337366|gb|EGD61201.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1044] gi|326339891|gb|EGD63698.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1125] gi|330909697|gb|EGH38211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AA86] gi|331041948|gb|EGI14092.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331062537|gb|EGI34457.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331072898|gb|EGI44223.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|332084445|gb|EGI89640.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 155-74] gi|332084815|gb|EGI89998.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 5216-82] gi|332089343|gb|EGI94447.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 3594-74] gi|332345603|gb|AEE58937.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNK88] gi|332749910|gb|EGJ80322.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-671] gi|332750592|gb|EGJ81000.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 4343-70] gi|332751169|gb|EGJ81572.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2747-71] gi|332764163|gb|EGJ94400.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2930-71] gi|332997786|gb|EGK17397.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-272] gi|333013320|gb|EGK32692.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-227] Length = 269 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|301047424|ref|ZP_07194504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] gi|300300698|gb|EFJ57083.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] Length = 269 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVEPSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|16131506|ref|NP_418092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89110376|ref|AP_004156.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. W3110] gi|157163116|ref|YP_001460434.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|170083143|ref|YP_001732463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194435950|ref|ZP_03068053.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238902726|ref|YP_002928522.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|253771524|ref|YP_003034355.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163563|ref|YP_003046671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|256021361|ref|ZP_05435226.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|300923419|ref|ZP_07139460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300927935|ref|ZP_07143494.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|301325317|ref|ZP_07218824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|332282595|ref|ZP_08395008.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|120475|sp|P05523|FPG_ECOLI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988460|sp|A8A697|FPG_ECOHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229541070|sp|B1X969|FPG_ECODH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|259647332|sp|C4ZXM7|FPG_ECOBW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41481|emb|CAA29431.1| unnamed protein product [Escherichia coli] gi|466773|gb|AAB18612.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|1790066|gb|AAC76659.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|85676407|dbj|BAE77657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K12 substr. W3110] gi|157068796|gb|ABV08051.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|169890978|gb|ACB04685.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194425493|gb|EDX41477.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238861125|gb|ACR63123.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|242379159|emb|CAQ33961.1| formamidopyrimidine DNA glycosylase [Escherichia coli BL21(DE3)] gi|253322568|gb|ACT27170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975464|gb|ACT41135.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|253979620|gb|ACT45290.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BL21(DE3)] gi|260447346|gb|ACX37768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|300420329|gb|EFK03640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300464027|gb|EFK27520.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|300847844|gb|EFK75604.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|315138217|dbj|BAJ45376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|323959883|gb|EGB55531.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H489] gi|323971277|gb|EGB66522.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA007] gi|332104947|gb|EGJ08293.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|331665260|ref|ZP_08366161.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] gi|331057770|gb|EGI29756.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQTVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL L I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSLSLAE------CELLAWVIKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|300939234|ref|ZP_07153914.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] gi|300455876|gb|EFK19369.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLTHLGPEPLSDDFNGEYLYQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|332996140|gb|EGK15767.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri VA-6] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPNLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|319942576|ref|ZP_08016885.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] gi|319803872|gb|EFW00794.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] Length = 275 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 105/295 (35%), Positives = 150/295 (50%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + VT + + LR +A G + + RRAKYL Sbjct: 1 MPELPEVEVTRRGLAPAIVGRCVTAVNVRTPKLREPL-QDLAALLPGLTLEHLERRAKYL 59 Query: 61 LIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVTISLTNNTNTKKYR 113 + ++ H+GMSGS+ I P+ P +H+H I + Sbjct: 60 IWTFRSAAGEKRWLLTHMGMSGSWRIW------PVPAPSAHKHDHADIVFGD------VL 107 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V Y DPRRFG + + T + P L LG EP D + A + K + ++K LL+ Sbjct: 108 VRYTDPRRFGSILFMTTDPRKSLP-LTKLGCEPWDPTLTADRFYTELQKTHRSIKEVLLS 166 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 KIV G GNIY EAL+ A + P R ++ + +L++ ++K L AI AGG Sbjct: 167 GKIVVGCGNIYCSEALFAAGIRPTRPADAISKARAG------RLLESVRKTLETAIAAGG 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+L D+ + G G+F A +VYG+ G+PC CG+ I RI Q GRSTF+C +CQ Sbjct: 221 STLHDFHGVSGETGWFPLACAVYGREGKPC-PICGRPITRIEQGGRSTFWCPHCQ 274 >gi|56416891|ref|YP_153965.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] gi|56388123|gb|AAV86710.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 3 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + H +P +H+HV + L + V++NDPR Sbjct: 63 VFVLSRGERVMFHLGMSGR--MAHV---RPYVREKHDHVALLLDGG-----FHVVFNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV Y+ R +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 113 RFGAVLLVNFQ-AYENIASR-IGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 168 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC + CG I + GRSTF+C CQ+ Sbjct: 222 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALCQR 269 >gi|307246928|ref|ZP_07528993.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255910|ref|ZP_07537711.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260363|ref|ZP_07542070.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852213|gb|EFM84453.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861178|gb|EFM93171.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865614|gb|EFM97495.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 273 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + K H+HV + + T + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQENQQPAGK---HDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGIHPELAAQNLTEKQSE------RLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|83746559|ref|ZP_00943609.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|207742244|ref|YP_002258636.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] gi|83726693|gb|EAP73821.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|206593632|emb|CAQ60559.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] Length = 288 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 149/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + + ++VHLGM+G+ + P H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEV----PAAPGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------CAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG +IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTLIRQIVQGQRSTFYCPVCQR 288 >gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] Length = 279 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ T+ + + + F+A + K I + RR KYL Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTPEADQFAAELKNKTIETIRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + LS++ HL M G + + +P +H+HV L + + + YND R Sbjct: 61 IFDFSNQLSMVSHLRMEGKYAV--VDRDQPYN--KHDHVIFELDDGQDLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L T + Q L+T+GPEP + YLT + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMVLTPTGQEMQVGGLKTIGPEPTPETLTLDYLTKALRSRKRVMKSFLLDQSLIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLRDY 239 GNIY E LW +K+ P R++ SL D KL++E I L +AI A G+++ Y Sbjct: 172 GNIYADEVLWLSKIHPQRRSNSLT-------DAEIKLLRESIFAELNEAIAAKGTTVFSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN VY + G PC C I +I A RST +C +CQ Sbjct: 225 LDATGHAGSFQNQLHVYHRQGLPC-PRCQTPIEQIKVAQRSTHFCPHCQ 272 >gi|241896103|ref|ZP_04783399.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] gi|241870617|gb|EER74368.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] Length = 278 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + + F F A R + I+ + RR KY Sbjct: 1 MPELPEVETVRRGLTNLVAGRTVESTEVRWEKTVGGFTAEEFDQALRNQTILKIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M GS+ + K +H+ VT L + + + Y D Sbjct: 61 LLFRFTGGITMVSHLRMEGSYY----TVPAGTKPGKHDLVTFHLDHGVD-----LFYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++V L T+GPEP +++ Y+ +F K ++K LLNQ +AG Sbjct: 112 RKFGRMNIVPNDQVMTVAGLATIGPEPTEDTLTLDYMISEFGKSKMHVKPFLLNQNHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P+ L D L L + I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHPLTAANQLT------TDELAILRKNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G+ G FQN VYG+ GEPCL CG+ + +I A R T YC CQ Sbjct: 226 TNVFGNAGEFQNELQVYGRVGEPCL-RCGEPLVKIKVAQRGTTYCPVCQ 273 >gi|21730608|pdb|1L1T|A Chain A, Mutm (Fpg) Bound To Abasic-Site Containing Dna gi|21730611|pdb|1L1Z|A Chain A, Mutm (Fpg) Covalent-Dna Intermediate gi|21730614|pdb|1L2B|A Chain A, Mutm (Fpg) Dna End-Product Structure gi|21730618|pdb|1L2C|A Chain A, Mutm (Fpg)-Dna Estranged Thymine Mismatch Recognition Complex gi|21730621|pdb|1L2D|A Chain A, Mutm (Fpg)-Dna Estranged Guanine Mismatch Recognition Complex Length = 274 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 154/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + ++I HL M G + + S +P++ H HV T+ + + Y Sbjct: 60 KFLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +V Sbjct: 110 DVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 AGFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 TYVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|82779125|ref|YP_405474.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae Sd197] gi|309784388|ref|ZP_07679027.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] gi|90101317|sp|Q329M2|FPG_SHIDS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81243273|gb|ABB63983.1| formamidopyrimidine DNA glycosylase [Shigella dysenteriae Sd197] gi|308927895|gb|EFP73363.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] Length = 269 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LTEGLPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAWLWAKELEGHNV--LAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|300087227|ref|YP_003757749.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526960|gb|ADJ25428.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 271 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + +++ +T + +H +R P FSA G+++ V RR KY Sbjct: 1 MPELPEVETVTNEIRPYVQDRVITGVVVHWPGTVRGHSPAQFSADLEGRRVTGVFRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ ++ HL M+GS I + +P + V I L + RVI+ DP Sbjct: 61 IVWELDDGNRLLTHLKMTGSLI----ALGPDDDDPPYVRVEIRLDDGR-----RVIFRDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + L LGPEP + F A K+ S +K ALL+Q ++AG Sbjct: 112 RKFGRMALVGEASGV----LAGLGPEPLADEFTAEVFESLLRKRKSPVKTALLDQTLMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y EAL A + P+R SL D +L I+++L AIDA G+S+ +Y Sbjct: 168 IGNMYADEALHSAGIHPLRPADSL------DTDEYRRLYLAIRRILRSAIDARGASISNY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +G+ AF V K GE C CG + RIV GR T+ C CQ+ Sbjct: 222 IRPGGDLGHAHFAFKVAHKRGENC-RGCGTPLERIVIRGRGTYLCPACQR 270 >gi|113866406|ref|YP_724895.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] gi|123134465|sp|Q0KEP4|FPG_RALEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113525182|emb|CAJ91527.1| Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] Length = 292 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 29/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPQLEMRLAQRVVRRIERRGKYL 60 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTN----T 109 L+E E ++VHLGM+G+ + + +P H+H+ + L T Sbjct: 61 LLECVSEAAGEPAGWLLVHLGMTGTLRVLPEA-----PSPGAHDHLDLVLAPGPGAALGT 115 Query: 110 KKYRVI--YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K ++ + DPRRFG + L E L +P LRTLG EP D +F+ +L ++ Sbjct: 116 KPGTIVLRFRDPRRFGAILWSTLPEAELP-SHPLLRTLGIEPFDPAFDGAWLHRHTRGRS 174 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +K LL IV G+GNIY E+L+RA + P L + +L Q +++ Sbjct: 175 AAIKTVLLAGGIVVGVGNIYASESLFRAGIRPTTPAGRLSRAR------CDRLAQAVRET 228 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L AI+ GGS+LRD+V DG+ GYFQ VY + G+PC C +R+IVQ RSTFYC Sbjct: 229 LAQAIERGGSTLRDFVGSDGASGYFQLDCLVYDRAGQPC-RVCATPVRQIVQGQRSTFYC 287 Query: 285 TYCQ 288 CQ Sbjct: 288 PNCQ 291 >gi|325273726|ref|ZP_08139926.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] gi|324101146|gb|EGB98792.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] Length = 270 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI E ++I HLGMSG+ ++E A +H HV I L + + Y DP Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEQGLPAA-----KHEHVDIELESGLMLR-----YTDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG M + L+++ L LGPEP + F+ L ++ +K +++ +V G Sbjct: 110 RRFGAMLWSQDPLRHEL--LLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R G + KL EI++VL AI+ GG++LRD+ Sbjct: 168 VGNIYASEALFAAGIDPRRAA------GGISRARYLKLAIEIKRVLAAAIEQGGTTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 222 IGGDGQPGYFQQTLFVYGRAGQPC-KVCGTELREVKLGQRASVFCPRCQR 270 >gi|254995076|ref|ZP_05277266.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Mississippi] gi|255003241|ref|ZP_05278205.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Puerto Rico] gi|255004368|ref|ZP_05279169.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Virginia] Length = 267 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 1 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + H +P +H+HV + L + V++NDPR Sbjct: 61 VFVLSRGERVMFHLGMSGR--MAHV---RPYVREKHDHVALLLDGG-----FHVVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV Y+ R +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 111 RFGAVLLVNFQ-AYENIASR-IGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 166 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC + CG I + GRSTF+C CQ+ Sbjct: 220 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALCQR 267 >gi|293463959|ref|ZP_06664373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|291321591|gb|EFE61027.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|323189457|gb|EFZ74738.1| formamidopyrimidine-DNA glycosylase [Escherichia coli RN587/1] Length = 269 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVVTKHAQRATFYCRQCQK 269 >gi|153826318|ref|ZP_01978985.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] gi|254225706|ref|ZP_04919313.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|125621826|gb|EAZ50153.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|149739887|gb|EDM54074.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] Length = 269 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +IE GN IVHLGMSGS I +H+HV + +T+ R+ YNDP Sbjct: 60 IIETAVGN--AIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ L LGPEP +FNA Y+ + K +K +++ V G Sbjct: 109 RRFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL +CG+ I A R+TF+C CQ Sbjct: 221 TQSDGKPGYFAQELQVYGKAKQPCL-HCGEPICEQKIAQRNTFFCPQCQ 268 >gi|22537632|ref|NP_688483.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|25011596|ref|NP_735991.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae NEM316] gi|76788529|ref|YP_330125.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77405216|ref|ZP_00782314.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] gi|77408547|ref|ZP_00785283.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77411672|ref|ZP_00788011.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77414744|ref|ZP_00790872.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|54037119|sp|P64153|FPG_STRA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040773|sp|P64152|FPG_STRA3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101319|sp|Q3K028|FPG_STRA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22534518|gb|AAN00356.1|AE014260_12 formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|24413135|emb|CAD47213.1| Unknown [Streptococcus agalactiae NEM316] gi|76563586|gb|ABA46170.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77159211|gb|EAO70394.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|77162244|gb|EAO73216.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77172821|gb|EAO75954.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77176218|gb|EAO78989.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] Length = 273 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + + F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G + ++ HL M G +++ + + +H H+ LTN + ++Y D R Sbjct: 61 LFDF-GEMVMVSHLRMEGKYLL----FPNKVPDNKHFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L ++ + +L+K EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKIHPQRLANQLTESETS---LLHK---EIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|153214741|ref|ZP_01949586.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|153800805|ref|ZP_01955391.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|153831394|ref|ZP_01984061.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] gi|124115177|gb|EAY33997.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|124123636|gb|EAY42379.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|148873126|gb|EDL71261.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] Length = 269 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQSLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|254448389|ref|ZP_05061850.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] gi|198262002|gb|EDY86286.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] Length = 270 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + R LR+ P F G +I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIEGQLVDSVVVRRDQLRYPVPKDFEQLM-GARIHCVERRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HLGMSGS + P K +H+H+ I+L N + + Y+DPR Sbjct: 60 IVNTDYK-HWLCHLGMSGSLRL--VDGDTPYK--KHDHLDIALANGRHLR-----YHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ + +P L LGPEP + F+ +L + + +KN +++ ++V G+ Sbjct: 110 RFGLVVWAGTTPQ-AHPLLCKLGPEPLGHHFSGEHLYAKSRGRKGAVKNFIMDSQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R + G + L Q IQ VL DAI GG++LRD+V Sbjct: 169 GNIYASECLFLAGIHPKRAAGRV----GLAR--YQALAQAIQTVLGDAITQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ EPC CG I V RS+++C CQ+ Sbjct: 223 NSDGQPGYFAQQLRVYGRAQEPC-PQCGSPIHTQVIGQRSSYFCKQCQR 270 >gi|307546413|ref|YP_003898892.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] gi|307218437|emb|CBV43707.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] Length = 305 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + ++ + + LR P + G + + RRAKYL Sbjct: 32 MPELPEVETTRRGIAPHVEAREIREVIVRQSRLRHPVPEDLADRLVGAHLGRLDRRAKYL 91 Query: 61 LIELEGNL--SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + G +++ HLGMSGS I P K H+HV + L + + Y+D Sbjct: 92 LMPVVGERGGTLLCHLGMSGSLRIARLG-ELPKK---HDHVDLVLDDGAILR-----YHD 142 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFGF+D ++ + L LGPEP +F+ L K+ +K L++ +V Sbjct: 143 PRRFGFIDWLDGDVARDRR-LAKLGPEPLSEAFDGERLYAMSRKRRLAVKPFLMDNAVVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P R+ + + T +L + I++VL AI GG++LRD Sbjct: 202 GVGNIYAAEALFLAGIDPRREAGRISRERYT------RLAEAIREVLAAAITQGGTTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V G GYF +VYG+ GEPC CG +R + R++ +C CQ+ Sbjct: 256 FVSGTGEPGYFAQRLNVYGRDGEPC-RRCGAELRLVTLGQRASVFCAACQR 305 >gi|295675408|ref|YP_003603932.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] gi|295435251|gb|ADG14421.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] Length = 276 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 151/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTATLRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E++ IVHLGM+G+ ++ H P +H+HV + + + Y DP Sbjct: 61 LFEIDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHVDWIFDD------FILRYRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E ++P L +LG EP +F+ + + ++K ALL IV Sbjct: 112 RRFGAVLWHPREEGDILEHPLLASLGVEPFSPAFSGAQMHRLTRGRKVSVKQALLAGDIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y+L+ + +V L AID GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYELLADAVRVTLAAAIDKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|262369235|ref|ZP_06062563.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] gi|262315303|gb|EEY96342.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] Length = 284 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 24/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ + V I + + +LR+ P S G+++I + RR+KY+ Sbjct: 1 MPELPEVETTKASLAPLL-DQQVLSIEVRQSSLRWPIPADLSKLV-GQRLIQLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +++ HLGMSGSF I C +H+H+ I + + Y+DPR Sbjct: 59 LAVFEQD-TMLWHLGMSGSFRI----CEVGETLRKHDHLIIRFED------VELRYHDPR 107 Query: 121 RFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L E S Q + TLGPEP FNA YL+ + K +K A+++ +V G Sbjct: 108 RFGCILWLDEYS---QTKLIDTLGPEPLSADFNAEYLSQKLKNKQVGIKVAIMDNHVVVG 164 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P + SL D + KL+ EI+++L AID GGS+LRDY Sbjct: 165 VGNIYATESLFNLGIHPAQVASSLTH------DQIEKLVVEIKRILQQAIDLGGSTLRDY 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 219 SNAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] Length = 273 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 151/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I L ++ ++ DI L + + F G+K++DV RRAK L Sbjct: 1 MPELPEVETIAAGLAPLVSGRSIRDIFLMQARVVRGDELEFQRRLLGRKVLDVRRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+G L ++ HL M+G + K ++ +H H+ + L + V ++D R Sbjct: 61 ILDLDGPLHLVFHLKMTGKVWVPD----KGVQPGKHTHLILDLGDEVY-----VFFDDQR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + + R LGPEP ++ T F + + +K+ LL+Q+++AGI Sbjct: 112 RFGYVTALTPPELESWDFYRGLGPEPL--HLSSQDFTDIFQGRKARIKSLLLDQQVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L D L L +Q+VL +AI AGGSS RDY Sbjct: 170 GNIYADEALYMAGIHPCTRAVDL------SGDQLEALHCSLQQVLQEAIQAGGSSFRDYR 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ F VYGK G PC CG + AGRS+ +C CQ Sbjct: 224 NALGVAGLFQENFKVYGKKGLPC-PECGANLESTKVAGRSSCFCPQCQ 270 >gi|311108753|ref|YP_003981606.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] gi|310763442|gb|ADP18891.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] Length = 275 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 152/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+T + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLTRLVIHESRMRWPIPPDLPATIAGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + IVHLGMSGS S A +H+HV + +DPR Sbjct: 61 LLRFEHG-TQIVHLGMSGSL----RSVAPGEFLRKHDHVEWIFEEAV------LRLHDPR 109 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG +P L LG EP D F+ +L F ++ +K LL V Sbjct: 110 RFGAVLWHPASDGPVDVHPLLAKLGIEPFDPRFDGAWLHRHFKNHSAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P KT + N +P +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRARINP--KTPA---NKLSPARC-ERLADMVRATLADALTSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC C IRRIVQ R+T+YC CQ+ Sbjct: 224 YVGATGEPGAYFEIHAAVYEREGQPC-RVCSTPIRRIVQGQRATYYCPKCQR 274 >gi|121999089|ref|YP_001003876.1| formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] gi|166215627|sp|A1WZG2|FPG_HALHL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121590494|gb|ABM63074.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] Length = 270 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + T+ + + ++ LR+ P AA G++++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLQVHLVGRTLQRVVVRQRQLRYPVPARVEAAVVGEEVVALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L G +++HLGMSGS + A+ +H+HV + L + + DPR Sbjct: 61 LIRLGGGAWLLLHLGMSGSLRL----VAETDAPGRHDHVDLVLNDGRAVR-----LTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + LR LGPEP ++F+ L + +K L++ +V G+ Sbjct: 112 RFGCL-LLGDGDPQDHRLLRRLGPEPLGSAFDGAVLHRAARGRRVAVKALLMDATVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R + + +L ++ VL A+ AGG++LRD+ Sbjct: 171 GNIYANEALFRAGIRPDRAAGRIARAR------YDRLAGAVRAVLEAALAAGGTTLRDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF SVYG + P CG +R+I A R T++C CQ+ Sbjct: 225 DGSGEPGYFAVNLSVYGASVCPV---CGGALRQIRLAQRGTWFCPRCQR 270 >gi|330831601|ref|YP_004394553.1| formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] gi|328806737|gb|AEB51936.1| Formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] Length = 270 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 160/294 (54%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID-----VSR 55 MPELPEVE+ R+ + + + VT + + LR+ P ++++D V R Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPIPGEI------QELVDLTIHRVRR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 RAKYLL+E + +I+ HLGMSGS + P + +H+HV I L N K R+ Sbjct: 55 RAKYLLLETDFGTAIL-HLGMSGSLRV--LDIGTPAE--KHDHVDIELENG---KLLRL- 105 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 NDPRRFG + L + L LGPEP ++F+A YL + +++ +K L++ + Sbjct: 106 -NDPRRFGAL-LWTREPAEAHALLAKLGPEPLTDAFSADYLQGRAKGRSTAIKQFLMDNQ 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY EAL+ A + P R ++ L L+ EI++VL +AI GG++ Sbjct: 164 VVVGVGNIYANEALYAAGIHPKRAVGNISAER------LGTLVAEIKRVLAEAIRQGGTT 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D+ DG GYF VYG+ G+PC +C ++ R+T +C++CQ+ Sbjct: 218 LKDFTSADGKPGYFVQQLQVYGRGGQPCF-HCHTLLTETRMGQRTTVFCSHCQR 270 >gi|256025635|ref|ZP_05439500.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 4_1_40B] gi|300948032|ref|ZP_07162172.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|300954471|ref|ZP_07166921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|301028394|ref|ZP_07191640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|301644301|ref|ZP_07244303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|307140333|ref|ZP_07499689.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H736] gi|312972080|ref|ZP_07786254.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|331644353|ref|ZP_08345482.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331655267|ref|ZP_08356266.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] gi|299878505|gb|EFI86716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|300318550|gb|EFJ68334.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|300452403|gb|EFK16023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|301077339|gb|EFK92145.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|310334457|gb|EFQ00662.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|315618662|gb|EFU99248.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3431] gi|323934820|gb|EGB31202.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1520] gi|323939606|gb|EGB35812.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E482] gi|331036647|gb|EGI08873.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331047282|gb|EGI19360.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] Length = 269 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + + N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMNNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|254286323|ref|ZP_04961282.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] gi|150423738|gb|EDN15680.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] Length = 269 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRLANSL------SLDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|303251764|ref|ZP_07337935.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249065|ref|ZP_07531072.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307258095|ref|ZP_07539847.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302649194|gb|EFL79379.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854353|gb|EFM86549.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306863458|gb|EFM95389.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 273 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + +P +H+HV + + T + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQEN-QQPAG--KHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQSE------RLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|229524827|ref|ZP_04414232.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297581674|ref|ZP_06943596.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] gi|229338408|gb|EEO03425.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297534081|gb|EFH72920.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] Length = 269 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|206559200|ref|YP_002229961.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] gi|238693090|sp|B4EAR7|FPG_BURCJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198035238|emb|CAR51112.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] Length = 275 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG IR+IVQ RST+YC CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPIRQIVQGQRSTYYCPTCQR 275 >gi|227510536|ref|ZP_03940585.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190188|gb|EEI70255.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 280 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L+ K + P F+ A + + I + RR KY Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLP-PEDFTNALKNQIIEKIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L I + L+I+ HL M G + +E P P +H H+ LT+ + YN Sbjct: 60 LFIRINNGLTIVSHLRMEGKYDVE------PEGTPLSKHTHIVFHLTDGRQLR-----YN 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q + Sbjct: 109 DTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNI 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E LW +K++P + +L + K + +I EI+K AID G+++ Sbjct: 169 AGLGNIYADEVLWLSKINPKQPVNTL--SVAELKLLRKSIIDEIKK----AIDGHGTTVH 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 223 SYSNAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|163858324|ref|YP_001632622.1| formamidopyrimidine-DNA glycosylase [Bordetella petrii DSM 12804] gi|229541069|sp|A9I6Y3|FPG_BORPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163262052|emb|CAP44354.1| fpg [Bordetella petrii] Length = 275 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 149/292 (51%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGKTLRRLLVRESRMRWPIPADLPGLLSGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + + IVHLGMSGS S +H+HV + T + +DPR Sbjct: 61 LLRFE-HGTQIVHLGMSGSL----RSVPAGEAPRKHDHVDWIFDHAT------LRLHDPR 109 Query: 121 RFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L LG EP D F+ +L QF + +K ALL V Sbjct: 110 RFGAVLWHPDTAGPIAAHPLLARLGIEPFDPRFDGAWLHSQFRNRAIAVKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P R + + +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTPARRISRAR------CARLADMVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G PC CG IRR+VQ R+T+YC CQK Sbjct: 224 YVGASGQPGSYFEIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYYCPSCQK 274 >gi|328950379|ref|YP_004367714.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] gi|328450703|gb|AEB11604.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] Length = 264 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 147/290 (50%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ L ++ + I H R+ + G+++ + RR K+L Sbjct: 1 MPELPEVETTRQALRPYLEGRAIRAIH-HTDPARY----RRTEDAVGRRVEVLRRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LEG L ++VHLGM+G F + + HV + L + +NDPR Sbjct: 56 IAALEGGLELVVHLGMTGGF-----------RFAEGPHVRVRL----EVPDRPLYFNDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +V + P L LGPEP ++F + +K LL Q++VAG+ Sbjct: 101 RFGRWWVVPAGAYREIPLLDRLGPEPLSDAFTLEGFREGLARTARGVKAVLLAQEVVAGL 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EALWRA + P R +L + +L I++VL +A+ AGGS+L+D Sbjct: 161 GNIYADEALWRAGVHPARPANTLEVGA------IARLYTAIREVLAEAVAAGGSTLQDGT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG++G FQ VYG+ G PC+ CG I + V AGR T +C CQ Sbjct: 215 YRRPDGALGRFQVQHKVYGRPGAPCV-RCGTPILKAVVAGRGTHFCPRCQ 263 >gi|229512786|ref|ZP_04402254.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] gi|229350296|gb|EEO15248.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] Length = 269 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|53718165|ref|YP_107151.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76810131|ref|YP_332171.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126441301|ref|YP_001057626.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 668] gi|126453315|ref|YP_001064872.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134279564|ref|ZP_01766276.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|167718022|ref|ZP_02401258.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei DM98] gi|167737037|ref|ZP_02409811.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 14] gi|167814146|ref|ZP_02445826.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 91] gi|167822670|ref|ZP_02454141.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 9] gi|167844242|ref|ZP_02469750.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei B7210] gi|167892753|ref|ZP_02480155.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 7894] gi|167901249|ref|ZP_02488454.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei NCTC 13177] gi|167909466|ref|ZP_02496557.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 112] gi|167917495|ref|ZP_02504586.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei BCC215] gi|217419604|ref|ZP_03451110.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242318008|ref|ZP_04817024.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254181862|ref|ZP_04888459.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|254187795|ref|ZP_04894307.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|254196842|ref|ZP_04903266.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|254258992|ref|ZP_04950046.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] gi|81690471|sp|Q63XL4|FPG_BURPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101297|sp|Q3JW82|FPG_BURP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215617|sp|A3NRA1|FPG_BURP0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215618|sp|A3N5K5|FPG_BURP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52208579|emb|CAH34515.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76579584|gb|ABA49059.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126220794|gb|ABN84300.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 668] gi|126226957|gb|ABN90497.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134248764|gb|EBA48846.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|157935475|gb|EDO91145.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|169653585|gb|EDS86278.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|184212400|gb|EDU09443.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|217396908|gb|EEC36924.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242141247|gb|EES27649.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254217681|gb|EET07065.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] Length = 276 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIF------DEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|39996100|ref|NP_952051.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|81702906|sp|Q74EG5|FPG_GEOSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39982865|gb|AAR34324.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|298505115|gb|ADI83838.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens KN400] Length = 271 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VT + LR P G+ I V RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHVTGRRVTAVTARAAKLRLPIPPELGERLTGRVIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L+ G+ + I+HLGM+G+ + P +P +++H+ + L ++ T ++R D Sbjct: 61 LLRC-GDGTAIIHLGMTGTLRV------APAGSPPGKYDHLDLVL-DDGRTLRFR----D 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG + L S +P L LGPEP FN YL + K+N+ +K L++ +IV Sbjct: 109 PRKFGLV-LWTGSDPLAHPLLAQLGPEPFPPLFNGSYLFSRSRKRNAAIKLLLMDNRIVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA++ P R SL + + L + VL DAI G ++L + Sbjct: 168 GVGNIYANEALFRARIHPERAAGSLSEED------CATLATAVGDVLRDAIAEGDTTLHE 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + GYF+ +VYG+TG+PC + CG I RI RST++C CQK Sbjct: 222 FIATEVPSGYFRINPAVYGQTGKPC-TVCGTPIARIRLGNRSTWFCPVCQK 271 >gi|256957262|ref|ZP_05561433.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|257077764|ref|ZP_05572125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294781290|ref|ZP_06746636.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|307267955|ref|ZP_07549343.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|256947758|gb|EEU64390.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|256985794|gb|EEU73096.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294451626|gb|EFG20082.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|306515596|gb|EFM84123.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|315032492|gb|EFT44424.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017] gi|315034274|gb|EFT46206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027] gi|315149640|gb|EFT93656.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012] gi|315174877|gb|EFU18894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346] gi|329577870|gb|EGG59291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467] Length = 280 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ KL Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-KLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|322513603|ref|ZP_08066701.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] gi|322120563|gb|EFX92463.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] Length = 273 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLQGKTIKQIVIRTNKLRWAISDELQQ-MQGAKIVSLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ I++HLGMSGS I E+ A +H+HV + + T + YND Sbjct: 60 ILHTTQG-DILIHLGMSGSLSILPENQQTAG-----KHDHVDLITQDGTILR-----YND 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG + T Q+ + LGPEP +F A YL + K +KN ++N IV Sbjct: 109 PRKFGCW--LWTQNAEQHELITRLGPEPLLEAFTAKYLFARSRNKTVAVKNFIMNNDIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY CE+L+ A + P T++L + +L++ I++VL AI GG++L+D Sbjct: 167 GVGNIYACESLFMAGIHPELATQNLTEKQ------CERLVKVIKEVLTKAIIQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG+ GE C ++C I V R++++C +CQ+ Sbjct: 221 FIQPDGKPGYFAQVLQVYGRKGEAC-NDCRTAIEAKVIGQRNSYFCPHCQE 270 >gi|227115115|ref|ZP_03828771.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 269 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 155/294 (52%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILSLS-DEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LIEL IIVHLGMSGS + E++ K H+HV + + + + Y D Sbjct: 60 LIELTRGW-IIVHLGMSGSLRVLPEYSEPEK------HDHVDLVMDSGKVLR-----YTD 107 Query: 119 PRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 PRRFG + D +ET L LGPEP + F+A YL K + +K +++ K Sbjct: 108 PRRFGAWLWTDNLETC-----SVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL +++ L+ I++VL +I+ GG++ Sbjct: 163 VVVGVGNIYASESLFAAGIHPDRTAGSLNESDAA------ILVGVIKQVLQLSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD++ DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 217 LRDFLQSDGKPGYFAQELRVYGRNGEPC-RTCGTPIEIAKHGQRSTFFCRRCQK 269 >gi|332638559|ref|ZP_08417422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Weissella cibaria KACC 11862] Length = 277 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + K + P F A G++I + RR KY Sbjct: 1 MPELPEVETVRRGLTRLVVGRTVQGTAVWWEKTVDGLSPEEFDAELAGRRIEAIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M G++ + + +H+ VT L + + ++Y D Sbjct: 61 LLFRFSGGMTMVSHLRMEGAYY----TVPAGTEPGKHDLVTFHLDDGID-----LLYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + Q L +GPEP +++ + Y+ +F K ++K LL+Q +AG Sbjct: 112 RKFGRMKLVPDAEALQVAGLAKIGPEPTESTLSLAYMVAEFGKSRMHVKPFLLDQSHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P L N +D L L I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHP------LTPANKLSEDELAVLRDNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VYG+ GEPCL CG + ++ A R T +C CQ Sbjct: 226 TTAFGEAGEFQNELQVYGRVGEPCL-RCGHPLEKMKVAQRGTTFCPVCQ 273 >gi|304411995|ref|ZP_07393605.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|307305890|ref|ZP_07585636.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] gi|304349545|gb|EFM13953.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|306911383|gb|EFN41809.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] Length = 271 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVPD-IAKQIIGQDIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP +FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCELP-EEAHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 219 KDFTNADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|163748879|ref|ZP_02156131.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] gi|161331653|gb|EDQ02458.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] Length = 271 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPHLVGQEVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + +II HLGMSGS I S P++ +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAGTTII-HLGMSGSLRIVPKST--PVE--KHDHIDLELASGKILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWSELP-EEAHPLLSKLGPEPLKDDFTPKYLFDSLKNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+ A + P Q DI L L+ +I+++L AI GG++L+D Sbjct: 169 GNIYANEALFAAGIHP--------QTEAGRLDIERLTILVTDIKQILASAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + DG GYF VYG+ GE C + CG ++ + R+T +C CQ+ Sbjct: 221 FTNADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEVRLGQRATVFCGICQQ 270 >gi|323524676|ref|YP_004226829.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] gi|323381678|gb|ADX53769.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] Length = 276 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 151/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E + IVHLGM+G+ ++ H P +H+HV + + + + DP Sbjct: 61 LFETDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHVDWIFDD------FILRFRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E +P L LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLAHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYGLLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|333012914|gb|EGK32291.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-304] Length = 269 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKQVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|219848489|ref|YP_002462922.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] gi|254789432|sp|B8G9X1|FPG_CHLAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219542748|gb|ACL24486.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] Length = 275 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L + + T+ + L + P F+A G++I V RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLTPPPPEFAALVAGRRIEAVGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+ ++ +HL MSG ++ + A + H H + L + R+I++D Sbjct: 61 LLLTLDAGWTLAIHLRMSGHLLVAEPAAA----DAPHVHFALDLDDGR-----RLIFDDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++++ GPEP + F L + + + +K LL+Q+++AG Sbjct: 112 RKFGRVHLLDSTGLLALDAAH--GPEPLTDDFTPAVLAERLRNRQAPIKALLLDQRLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A + P+ +L D + L I+ VL DAI GSSLR+Y Sbjct: 170 IGNIYANEALWLAGIHPLTPGGTLT------VDQIAALHHAIRLVLADAIANQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q F+VY + G+PC C I RIV A RSTF+C CQ Sbjct: 224 RDGYGRRGNYQEHFNVYDRVGKPC-PRCQTAIERIVVAQRSTFFCPLCQ 271 >gi|38492995|pdb|1R2Y|A Chain A, Mutm (Fpg) Bound To 8-Oxoguanine (Oxog) Containing Dna gi|38492998|pdb|1R2Z|A Chain A, Mutm (Fpg) Bound To 5,6-Dihydrouracil (Dhu) Containing Dna Length = 274 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 154/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MP+LPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + ++I HL M G + + S +P++ H HV T+ + + Y Sbjct: 60 KFLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +V Sbjct: 110 DVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 AGFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 TYVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|15640251|ref|NP_229878.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586313|ref|ZP_01676102.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121729455|ref|ZP_01682084.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|147674090|ref|YP_001218481.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|153820030|ref|ZP_01972697.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|153821781|ref|ZP_01974448.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|227080441|ref|YP_002808992.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|229506978|ref|ZP_04396486.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229509348|ref|ZP_04398831.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229516295|ref|ZP_04405743.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229606486|ref|YP_002877134.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254851351|ref|ZP_05240701.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255744033|ref|ZP_05417987.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262161924|ref|ZP_06030941.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|262168066|ref|ZP_06035765.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|298500863|ref|ZP_07010665.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] gi|21362548|sp|Q9KVC5|FPG_VIBCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|172047483|sp|A5F407|FPG_VIBC3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789454|sp|C3LQI3|FPG_VIBCM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9654629|gb|AAF93397.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549433|gb|EAX59461.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121628630|gb|EAX61105.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|126509434|gb|EAZ72028.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|126520677|gb|EAZ77900.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|146315973|gb|ABQ20512.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|227008329|gb|ACP04541.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|227012068|gb|ACP08278.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|229346721|gb|EEO11691.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229353663|gb|EEO18600.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229356083|gb|EEO21002.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229369141|gb|ACQ59564.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254847056|gb|EET25470.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255738298|gb|EET93689.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262023599|gb|EEY42301.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|262028302|gb|EEY46958.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|297540367|gb|EFH76426.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] Length = 269 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPLCEQKIAQRNTFFCPQCQ 268 >gi|312868208|ref|ZP_07728408.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] gi|311095953|gb|EFQ54197.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] Length = 274 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + + + K ++ D F G++I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILEKTIQSVEVKYAKMIQTDL-DAFCQDLPGQEIRAMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L +L +I HL M G + P++ +H HV T+ + ++Y D Sbjct: 60 LLFYLT-DLVLISHLRMEGKYFFYPDEV--PLR--KHAHVFFHFTDGST-----LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG Sbjct: 110 RKFGTMEVLVPELVDSYFLAKKIGPEPTEADFKDPAFQAALKKSKKPIKSALLDQKLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+RAK+ P R +SL + +E VL A+ GGS++R Y Sbjct: 170 LGNIYVDEVLYRAKVHPARLGQSLTAREAK------AIRKETIAVLAQAVKKGGSTIRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 224 SNAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|94984550|ref|YP_603914.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] gi|94554831|gb|ABF44745.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] Length = 289 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/301 (34%), Positives = 157/301 (52%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I H R+ +A G++I +SRR KYL Sbjct: 1 MPELPEVETTRRKIEPLLAGRIILNIA-HNAPQRY----RDTALAHGRRISGLSRRGKYL 55 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ L +L +IVHLGM+G F +E + H ++LT + Sbjct: 56 ILHLVPPEARSDEPHDLELIVHLGMTGGFRLE-----------EGPHTRVTLTTDAG--- 101 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG M +V P L +GPEP + F + + +K L Sbjct: 102 -QLYFNDPRRFGKMAVVPAGAYGGMPTLAAMGPEPLSDDFREEDFVRRAAWAGA-VKPWL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LWRA++ P + S + +L + I++V+ +A+ A Sbjct: 160 LSQKPVSGVGNIYADESLWRARIHPAQTNLSAPEAG--------RLYRAIREVMAEAVAA 211 Query: 232 GGSSLRD----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL D Y DG++G+FQ +VYG+TG+ C CG I+++V A R T +C C Sbjct: 212 GGSSLGDGPGNYRQHDGAVGFFQGQHAVYGRTGQLC-PRCGTPIQKMVLAQRGTHFCPAC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|296161532|ref|ZP_06844337.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] gi|295888176|gb|EFG67989.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] Length = 276 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E++ IVHLGM+G+ ++ H P +H+HV + ++ + Y DP Sbjct: 61 LFEIDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHV------DWIFDEFILRYRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYDLLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|91781717|ref|YP_556923.1| formamidopyrimidine-DNA glycosylase [Burkholderia xenovorans LB400] gi|122970731|sp|Q145W8|FPG_BURXL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91685671|gb|ABE28871.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia xenovorans LB400] Length = 276 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVEVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E++ IVHLGM+G+ ++ H P +H+HV + ++ + Y DP Sbjct: 61 LFEIDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHV------DWIFDEFILRYRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------ATAAGRVSLVRYDLLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|190151346|ref|YP_001969871.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264701|ref|ZP_07546281.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692363|sp|B3GZD6|FPG_ACTP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189916477|gb|ACE62729.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870013|gb|EFN01777.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 273 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + +P +H+HV + + + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQEN-QQPAG--KHDHVDLITQDGMVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P L N T K +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHP-----ELAAQNLTEKQC-ERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|327483101|gb|AEA77508.1| Formamidopyrimidine-DNA glycosylase [Vibrio cholerae LMA3894-4] Length = 269 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFISRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|145301060|ref|YP_001143901.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] gi|166215608|sp|A4STD1|FPG_AERS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|142853832|gb|ABO92153.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 270 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 160/294 (54%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID-----VSR 55 MPELPEVE+ R+ + + + VT + + LR+ P ++++D VSR Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEI------QELVDLTIHRVSR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 RAKYLL+E + + + HLGMSGS + + P + +H+HV I L N K R+ Sbjct: 55 RAKYLLLETDFGTADL-HLGMSGSLRV--LNIGTPAE--KHDHVDIELANG---KLLRL- 105 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 NDPRRFG + L + L LGPEP ++FNA YL + +++ +K L++ Sbjct: 106 -NDPRRFGAL-LWTREPAEAHALLAKLGPEPLTDAFNAEYLQGRAKGRSTAIKTFLMDNH 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY EAL+ A + P R ++ + L L+ EI++VL AI GG++ Sbjct: 164 VVVGVGNIYANEALYAAGIHPKRAAGNI------SAERLETLVAEIKRVLASAIQQGGTT 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D+ DG GYF VYG+ G+ C +C ++ I R+T +C++CQ+ Sbjct: 218 LKDFTSADGKPGYFVQQLQVYGRGGQACF-HCHTLLSEIRLGQRTTVFCSHCQR 270 >gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] gi|90101299|sp|Q3ABL4|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] Length = 263 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 153/293 (52%), Gaps = 34/293 (11%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE I+R L ++ K + ++ L + KN+ + F+ GK+I+ + RR Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLPKIIKNVSVE---EFTRRVVGKEIVALKRR 57 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYLLI+L G ++ VHL M+G +I K +H H L + + + Sbjct: 58 GKYLLIDLSGKETVTVHLRMTGKLLILPKGSPKD----KHTHAIFDLGD------LELHF 107 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND R+FG ++ P +GPEP ++ F YL + NLK LL+QKI Sbjct: 108 NDIRQFG-------GFSFEMP---EIGPEPLEDEFTPEYLKTKLKASQKNLKAVLLDQKI 157 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+ A LSP R SL ++ +L + I+K+L I+ G+S+ Sbjct: 158 IAGIGNIYADEILFEAGLSPKRIAASLSEDEAE------ELFKAIRKILALGIEYRGTSI 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYV + G FQ VYGK G C+ C ++ R AGRST YC +CQK Sbjct: 212 RDYVDAENQQGSFQRLLKVYGKNGSLCV-RCNNVLIRERHAGRSTHYCPHCQK 263 >gi|116625750|ref|YP_827906.1| formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|122252077|sp|Q01RU9|FPG_SOLUE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116228912|gb|ABJ87621.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 264 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ T + + LR P SA G+KI+ + R K++ Sbjct: 1 MPELPEVETVVRSLAPLVGRRIATAEFRNLRILRGGDPDLMSARLAGRKILSIKRYGKFI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +EG +++HLGM+G ++ S +H H ++ T ++++D R Sbjct: 61 VAVIEGGGHLMIHLGMTGKLLLGGPSG-------KHTHAVLTFDRGT------LLFDDSR 107 Query: 121 RFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG ++ E ++P + LGPEP + SF ++ + +K+ LLNQ + G Sbjct: 108 QFGCIEYSE-----EFPKRVARLGPEPMEISFED--FAADLKRRKTRIKSLLLNQTFIRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+RA + P T + KL I +VL +AI+AGGSS+ DY Sbjct: 161 VGNIYADEALFRAGIHPQALTSRIRIERAR------KLYDAIGEVLTEAIEAGGSSISDY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G+FQ + VY +TGEPCL NC IRR++ RS+ +C +CQK Sbjct: 215 VDAEGRSGFFQFSHRVYQRTGEPCL-NCKTPIRRVIVTQRSSHFCPHCQK 263 >gi|237810776|ref|YP_002895227.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] gi|237505017|gb|ACQ97335.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] Length = 276 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPVGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPPPAPA-KHDHV------DWIFDEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|187922596|ref|YP_001894238.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] gi|238689469|sp|B2SXG9|FPG_BURPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187713790|gb|ACD15014.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] Length = 276 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E++ IVHLGM+G+ ++ H P +H+H+ + ++ + Y DP Sbjct: 61 LFEIDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHI------DWIFDEFILRYRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E ++P L +LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLEHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y+L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYELLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|254247180|ref|ZP_04940501.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] gi|124871956|gb|EAY63672.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] Length = 331 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 57 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 116 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+HV + ++ + + DPR Sbjct: 117 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHV------DWIFDEFVLRFRDPR 167 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 168 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 227 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 228 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 281 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 282 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 331 >gi|320449520|ref|YP_004201616.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] gi|320149689|gb|ADW21067.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] Length = 265 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 143/290 (49%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ + + + HR R+ + G+++ + RR K+L Sbjct: 1 MPELPEVETTRRKLLPLFVGKRLLQLE-HRDPRRY----RHTERAEGQRVEGIRRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L ++VHLGM+G F +E + H V L + + ++DPR Sbjct: 56 LFALTEGWEMVVHLGMTGGFRLERSP---------HTRVAFQLEDRE------IFFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +V + P L LGPEP F LK LL Q++ AG+ Sbjct: 101 RFGRIWVVRKGDYQKIPLLLQLGPEPLSEDFRFHEFWLGLKGSQKPLKALLLEQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA+LSP R+ R L + +L ++KVL +A+ GGS+L D Sbjct: 161 GNIYADEALFRARLSPFRRGRELTEAEAQ------RLFAALKKVLAEALLLGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+TG PC CG I + V AGR T +C CQ Sbjct: 215 YQQPDGLPGSFQMRHAVYGRTGLPC-PVCGTPIAKRVVAGRGTHFCPRCQ 263 >gi|292486569|ref|YP_003529437.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|292897807|ref|YP_003537176.1| formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC 49946] gi|291197655|emb|CBJ44750.1| formamidopyrimidine-DNA glycosylase [DNA-(apurinic or apyrimidinic site) lyase] [Erwinia amylovora ATCC 49946] gi|291551984|emb|CBA19021.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|312170630|emb|CBX78893.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 269 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 150/293 (51%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNNRLRWPVSQEIHTLS-DQPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + +++ + Y DPR Sbjct: 60 LLELPTGW-IIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSHGKVLR-----YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP F A YL + + + +K L++ K+ Sbjct: 110 RFGAWLWCADLNGSSV------LSHLGPEPLSEGFCARYLFEKSRGRRTAIKPWLMDNKV 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++L Sbjct: 164 VVGVGNIYASESLFVAGILPDRPAMALSEQEAG------LLVSTIKAVLLRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD++ DG GYF VYG+ GEPC C I A RSTF+C CQK Sbjct: 218 RDFLQSDGKPGYFAQELQVYGREGEPC-RVCALPIESSKHAQRSTFFCRRCQK 269 >gi|296270739|ref|YP_003653371.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] gi|296093526|gb|ADG89478.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] Length = 294 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 157/305 (51%), Gaps = 36/305 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR---FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE+IRR L + + LH +++R D P A +G+ ++ RR Sbjct: 1 MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRRNTGDLP----ARLKGRPLLSAERR 56 Query: 57 AKYLLIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL + L E +++VHLGMSG ++ P H+ + L Sbjct: 57 GKYLWLPLGDGDPADPREAEEALVVHLGMSGQLLLTDRGA------PAERHLRVRLGFAD 110 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYP-PLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + R + D R FG M + + Y + P P+ + P+P + +F+ H+ ++ Sbjct: 111 DGPELRFV--DQRTFGHMLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFAHRLTRRR 168 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + LK ALL+Q +++G+GNIY EALWRA+L R T +L T +L+ +++ V Sbjct: 169 TGLKRALLDQSLISGVGNIYADEALWRARLHWARATETLTAAEVT------ELLAQVRAV 222 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L DAI GG+S YV+++G GYF + +VYG+ EPC CG +RR RS++ Sbjct: 223 LTDAIAQGGTSFDSLYVNVNGESGYFGRSLAVYGRQDEPC-PRCGAPVRRDPFMNRSSYS 281 Query: 284 CTYCQ 288 C CQ Sbjct: 282 CPKCQ 286 >gi|149182833|ref|ZP_01861294.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] gi|148849448|gb|EDL63637.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] Length = 274 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRF-DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + + + K ++ D F + +G+ I V RR K Sbjct: 1 MPELPEVETVRRTLAELVTGKRIKSVSVFWPKMVKLPDEVEEFKLSLQGETIQGVDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+++ + S++ HL M G + + + +H HV + T + Y D Sbjct: 61 FLILQTD-RYSLVSHLRMEGRYGV----FPGDEEVEKHTHVIFHFEDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP +F YLT + K +K LL+Q ++ Sbjct: 111 VRKFGTMHLFPKGEENLSLPLSQLGPEPFSPNFTVNYLTEKLAKTERAVKAVLLDQTVLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+ + P RK +S+ K + KL EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRSGIHPARKAKSV------KKSEMKKLHNEIIDTLSEAVEQGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ E C S CG+ I + V AGR T +C CQK Sbjct: 225 YVNSQGQIGMFQQQLFVYGRKNEECRS-CGKPIEKNVTAGRGTHFCPNCQK 274 >gi|291294733|ref|YP_003506131.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] gi|290469692|gb|ADD27111.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] Length = 268 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 153/292 (52%), Gaps = 30/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + LH+ R+ + G++++ SRR KYL Sbjct: 1 MPELPEVETTRRILEPYLLGQRIQQL-LHQDPARY----RNTERAEGRRVLGTSRRGKYL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+ NL +IVHLGM+G F E +H VT+ L + T + Y DPR Sbjct: 56 IIHLDENLELIVHLGMTGGFRFEPH---------RHTRVTLHLPHQT------LYYTDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +VE + L +GPEP + F + Q + +K LL Q+ VAG+ Sbjct: 101 RFGKWWVVEAGDYREIDLLCRMGPEPLSDDFTLAHF-QQALRTPRKIKEVLLAQEAVAGV 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY E+LW +++ P R SL +P+ + +L + I+ V+ A++AGGS+L D Sbjct: 160 GNIYADESLWLSQIHPERPAASL----SSPE--VRRLYKAIRVVMERAVEAGGSTLSDAS 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ + Y +TG+PC C I +IV GR T +C CQ+ Sbjct: 214 YRQPDGQPGYFQFQHNAYDRTGQPCKRKGCTGRIAKIVVGGRGTHFCPQCQQ 265 >gi|167036164|ref|YP_001671395.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] gi|189044669|sp|B0KN79|FPG_PSEPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166862652|gb|ABZ01060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] Length = 270 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELG----LPAAKHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPLNHEL--LLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTALREVKLGQRASVYCPRCQR 270 >gi|126172330|ref|YP_001048479.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|153002820|ref|YP_001368501.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] gi|166198748|sp|A3CYP7|FPG_SHEB5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198749|sp|A6WUE9|FPG_SHEB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|125995535|gb|ABN59610.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|151367438|gb|ABS10438.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] Length = 271 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVPD-IAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP +FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCELP-EEAHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 219 KDFTNADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|170691500|ref|ZP_02882665.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] gi|170143705|gb|EDT11868.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] Length = 276 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E + IVHLGM+G+ ++ H P +H+HV + ++ + + DP Sbjct: 61 LFETDAGW-FIVHLGMTGTLRVLRHVP--HPPAAAKHDHV------DWIFDEFILRFRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYGLLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G+PC CG IR+IVQ RST++C CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIRQIVQGQRSTYFCPTCQR 276 >gi|170734143|ref|YP_001766090.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] gi|169817385|gb|ACA91968.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] Length = 327 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 53 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 112 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 113 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 163 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 164 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 223 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 224 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 277 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 278 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 327 >gi|28948974|pdb|1NNJ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna gi|49258485|pdb|1PJJ|A Chain A, Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna Length = 271 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 145/287 (50%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL M G + + + +H+H+T+ + ++IY D R+F Sbjct: 62 EIGDDFRLISHLRMEGKYRLATLDAPRE----KHDHLTMKFADG------QLIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y + Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTYSAL 225 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 226 -GSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|207727840|ref|YP_002256234.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] gi|206591081|emb|CAQ56693.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] Length = 288 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 148/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + + ++VHLGM+G+ + P H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEV----PAAPGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMHARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|294651377|ref|ZP_06728695.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] gi|292822732|gb|EFF81617.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] Length = 281 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 157/291 (53%), Gaps = 28/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 9 MPELPEVETTKTSLLPLL-TQRVQSVKVLNASLRWPIPDNLEKLV-GQRLTALKRRSKYI 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C +H+H+ I + ++ Y+DPR Sbjct: 67 LAEFEQD-QMLWHLGMSGSFRL----CEPNDALRKHDHLIIDFEDQ------QLRYHDPR 115 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG ++D V Q + TLGPEP FNA YL + KKN +K AL++ +V Sbjct: 116 RFGCILWLDQVN-----QSKLIDTLGPEPLSEDFNARYLLEKLQKKNVGIKIALMDNHVV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ + P + +L K + KL+ E++++L AID GGS+LR Sbjct: 171 VGVGNIYATESLFNIGVHPAQPASTLT------KAQVEKLVIEVKRILKHAIDLGGSTLR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 225 DYSNAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 274 >gi|21730426|pdb|1K82|A Chain A, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730427|pdb|1K82|B Chain B, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730428|pdb|1K82|C Chain C, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730429|pdb|1K82|D Chain D, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna Length = 268 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 155/289 (53%), Gaps = 22/289 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR + + T+ + LR+ + + ++ V RRAKYLL Sbjct: 1 PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYLL 59 Query: 62 IEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +EL EG II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 109 RFGAW--LWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 167 GNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDFL 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 268 >gi|312868766|ref|ZP_07728958.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] gi|311095752|gb|EFQ54004.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] Length = 277 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 145/290 (50%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K + I ++ + F A G+ I D+ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKGRKINAIDVYYGKTITNDVEDFRQALIGQTIEDIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L NL+++ HL M G + +PI P +H HV T+ T + Y+D Sbjct: 61 LFRFSNNLTMVSHLRMEGKYY------NQPIGGPIDKHTHVVFQFTDGTE-----LCYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LVET + L+TLGPEP F + + + +K LLNQ+ VA Sbjct: 110 TRKFGRMTLVETGDEKTVGGLKTLGPEPTAADFKLAFFQDELGRSRGKIKPFLLNQRHVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW +K++P + SL TP D L I K L A G+++ Sbjct: 170 GLGNIYVDEVLWMSKINPEQPANSL-----TP-DQAAVLHDNIIKELAVATKYKGTTVHS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 224 FTNAFGDAGGFQERLNAYGRGGEKC-PRCGAKMVKIKVAQRGTTFCPHCQ 272 >gi|307262493|ref|ZP_07544138.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867870|gb|EFM99701.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 273 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + +P +H+HV + + T + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQEN-QQPAG--KHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P L N T K +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHP-----ELAAQNLTEKQ-CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|262371760|ref|ZP_06065039.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] gi|262311785|gb|EEY92870.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] Length = 273 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 164/290 (56%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V I ++ +LR+ P+ + G++++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLEQ-RVQSIQVYNSSLRWPIPNDLNKLI-GQRLMALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFERD-QMLWHLGMSGSFRL----CEANEELRKHDHLVIDFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + Q + TLGPEP ++FNA+YL + KN +K AL++ V G+ Sbjct: 108 RFGCILWLDQN--NQEKLIDTLGPEPLSDAFNAVYLFEKLSNKNVGIKIALMDNHNVVGV 165 Query: 181 GNIYVCEALWRAKLSPIR--KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E+L+ + P + T SL+Q + L+ E++++L AI+ GGS+LRD Sbjct: 166 GNIYATESLFNVGIHPAQPASTLSLVQ--------IESLVIEVKRILKHAIELGGSTLRD 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 218 YTNAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|107023731|ref|YP_622058.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia AU 1054] gi|116690818|ref|YP_836441.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] gi|122978692|sp|Q1BTH0|FPG_BURCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215614|sp|A0KAM1|FPG_BURCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|105893920|gb|ABF77085.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia cenocepacia AU 1054] gi|116648907|gb|ABK09548.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] Length = 275 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 275 >gi|262404958|ref|ZP_06081510.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] gi|262348797|gb|EEY97938.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] Length = 269 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL +I GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVSIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|165977434|ref|YP_001653027.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250371|ref|ZP_07336570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253680|ref|ZP_07535547.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|238687532|sp|B0BU16|FPG_ACTPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|165877535|gb|ABY70583.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650841|gb|EFL80998.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858916|gb|EFM90962.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 273 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + +P +H+HV + + T + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQEN-QQPAG--KHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P L N T K +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHP-----ELAAQNLTEKQC-ERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|160877565|ref|YP_001556881.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217975407|ref|YP_002360158.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|189044676|sp|A9KW47|FPG_SHEB9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789451|sp|B8EDQ9|FPG_SHEB2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160863087|gb|ABX51621.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217500542|gb|ACK48735.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|315269763|gb|ADT96616.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS678] Length = 271 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVPD-IAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG E + +P L LGPEP N+FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCELP-EEAHPLLAKLGPEPLTNAFNVTQLAAALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + DG GYF VY + GE C S CG ++ I R+T +C CQ Sbjct: 219 KDFTNADGKPGYFAQKLHVYSRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|148544470|ref|YP_001271840.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri DSM 20016] gi|184153835|ref|YP_001842176.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227363102|ref|ZP_03847237.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|325682792|ref|ZP_08162308.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] gi|148531504|gb|ABQ83503.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus reuteri DSM 20016] gi|183225179|dbj|BAG25696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227071820|gb|EEI10108.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|324977142|gb|EGC14093.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] Length = 276 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I ++ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L +L++I HL M G + +PI P +H HV T+ T + Y D Sbjct: 61 LFRFTNDLTMISHLRMEGRYY------NQPIGGPIDKHTHVVFEFTDGTE-----LCYQD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VA Sbjct: 110 TRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW ++P + +L N + +L + I K L AI G+++ Sbjct: 170 GLGNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 224 FTNAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|229521061|ref|ZP_04410482.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] gi|229341946|gb|EEO06947.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] Length = 269 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 146/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE S IVHLGMSGS I +H+HV + + + R+ YNDPR Sbjct: 60 IIETAVG-SAIVHLGMSGSLRILDGD----FPAARHDHVDLVMASGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|26991801|ref|NP_747226.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148550201|ref|YP_001270303.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida F1] gi|37999400|sp|Q88CQ5|FPG_PSEPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198734|sp|A5WAF9|FPG_PSEP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24986913|gb|AAN70690.1|AE016712_8 formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148514259|gb|ABQ81119.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas putida F1] gi|313501101|gb|ADR62467.1| MutM [Pseudomonas putida BIRD-1] Length = 270 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELG----LPAAKHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPLNHEL--LLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVYCPRCQR 270 >gi|319939215|ref|ZP_08013578.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] gi|319811611|gb|EFW07887.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] Length = 274 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADAFVLDLPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + L N +I HL M G ++ E K H+HV T+ +N ++Y D Sbjct: 61 IFYLT-NWVLISHLRMEGKYLFYPEEAQLTK------HSHVIFHFTDGSN-----LVYQD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ Y R LGPEP ++ F+ K +K LL+Q +VA Sbjct: 109 VRKFGTMELLRKERLTSYFTERKLGPEPTESDFHLPPFKAALKKSKKLIKPYLLDQTLVA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LWRA++ P R +SL + + L ++I VL I+ GGS++R Sbjct: 169 GLGNIYVDEVLWRAQIHPARVAQSLNRAE------MKHLREQIIAVLQLGIEKGGSTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 223 YRNALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|295696994|ref|YP_003590232.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] gi|295412596|gb|ADG07088.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] Length = 300 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPE PEVE IRR L ++ + L + +R P F+A G+ ++ RR KY Sbjct: 1 MPEWPEVEQIRRELAVLEGSRIAGVTVLCERTIRTPADPEEFAARLAGETWQEIGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL ++I HL M G + + P+ ++ V L + + + Y D Sbjct: 61 LLFHGL-RWTLISHLRMEGRYRL--VEAKTPVD--EYTRVIFHLEDGKDLR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG MD VE +PP+ +LGPEP D L + K +K LLNQ+++AG Sbjct: 111 RKFGTMDAVERRQWEVFPPIASLGPEPFDPQLTPEVLRRRLSGKG-RIKGLLLNQRVIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R + P R RSL TP + +L+ +++ +L +A+ AGG+++R Y Sbjct: 170 LGNIYVDEVLFRTGIHPERPGRSL-----TPAEA-ERLLAQMRALLQEALVAGGATVRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V DG G Q VYG+TG+PC CG I R V AGR T C CQ Sbjct: 224 VRSDGRPGLMQEHLFVYGRTGQPC-RVCGHSIERRVVAGRGTHICPVCQ 271 >gi|255020678|ref|ZP_05292740.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254969914|gb|EET27414.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 270 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L ++ T+T + +K LR P + RG+ + + RR KYL Sbjct: 1 MPELPEVEVTRLALAPHLEGQTLTGAVVRQKKLRQWVPPDLDSRLRGRVLNRLDRRGKYL 60 Query: 61 LIE-LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + + G L ++HLGMSGS + A + H+HV I L + + + DP Sbjct: 61 LADFVHGQL--LLHLGMSGSLRLLPQDMAATV----HDHVDILLGDGRCLR-----FRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + +P LR LGPEP +F+ L + + +K+ L++ V G Sbjct: 110 RRFGL--ILWNTEGAAHPLLRDLGPEPLAENFSGQVLYRRSRGRQQAVKSFLMDSHTVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAIDAGGSSLRD 238 +GNIY E+L+RA + P R G Y L I+ VL +AI GG++LRD Sbjct: 168 VGNIYATESLFRAGIDPRRAA-------GRISAARYDDLAMVIRTVLREAIAQGGTTLRD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF+ + YG+ GEPC+ CG +R GR+T +C YCQ Sbjct: 221 FFQPDGGNGYFRLSLQAYGREGEPCI-RCGGTLRGQRLGGRATVFCPYCQ 269 >gi|194466652|ref|ZP_03072639.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] gi|194453688|gb|EDX42585.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] Length = 276 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L +L++I HL M G + +PI P +H HV T+ T + Y D Sbjct: 61 LFRFTNDLTMISHLRMEGKYY------NQPIGGPIDKHTHVVFEFTDGTE-----LCYQD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VA Sbjct: 110 TRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW ++P + +L N + +L + I K L AI G+++ Sbjct: 170 GLGNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ+ YG G+ C CG + +I A R T +C CQ Sbjct: 224 FTNAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPRCQ 272 >gi|256617749|ref|ZP_05474595.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] gi|256597276|gb|EEU16452.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] Length = 280 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQVAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|197286978|ref|YP_002152850.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|238690077|sp|B4F0X6|FPG_PROMH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194684465|emb|CAR46215.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|301072215|gb|ADK56069.1| Fpg [Proteus mirabilis] gi|301072237|gb|ADK56090.1| Fpg [Proteus mirabilis] gi|312598039|gb|ADQ89973.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] gi|312598060|gb|ADQ89993.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] Length = 274 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 149/292 (51%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I P + P+ H I L + K R Y DPR Sbjct: 60 LIELNQGW-IIVHLGMSGSVRI------LPEEQPEEKHDHIDLVFR-DGKVLR--YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG DL +S+ L LGPEP FNA YL Q K +K L++ K+ Sbjct: 110 RFGAWLWCEDLATSSV------LAHLGPEPLSAQFNAQYLYQQSKNKKIAIKPWLMDNKL 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY EAL+ + + P RK SL + D+ L+ I+ VL +I+ GG++L Sbjct: 164 VVGVGNIYANEALFSSGIMPDRKASSLTEQEC---DV---LVNAIKTVLTRSIEQGGTTL 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D++ DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 218 KDFLQSDGKPGYFAQELFVYGRKDKACLI-CGHTIESIKQGQRSTFFCRHCQ 268 >gi|259503618|ref|ZP_05746520.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] gi|259168442|gb|EEW52937.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] Length = 277 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K+ + I ++ + F A G+ I DV RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKDRKINAIDVYYGKTITNDVEKFRQALIGQTIEDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L NL+++ HL M G + +PI P +H HV T+ + + Y+D Sbjct: 61 LFRFSNNLTMVSHLRMEGKYY------NQPIGGPIDKHTHVVFQFTDGSE-----LCYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+T + L+TLGPEP F + + H+ +K LLNQ+ VA Sbjct: 110 TRKFGRMTLVKTGDEKTVGGLKTLGPEPTAADFKLDFFRDELHRSRGKIKPFLLNQQHVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E LW +K++P + SL +P D + L I K L A G+++ Sbjct: 170 GLGNIYADEVLWMSKINPEQPANSL-----SP-DQVQALHDNIIKELAVATKYKGTTVHS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 224 FTNAFGDAGGFQERLNAYGRGGEKC-PRCGTKMVKIKVAQRGTTFCPHCQ 272 >gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] gi|189044668|sp|A5D0T6|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] Length = 276 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + + +T + L K +R F KKI+ V RR KY Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLPKVIRSPELSEFKETIADKKILKVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI L ++ VHL M+G + CA +H HV +L+N + + D Sbjct: 61 LLINLSEGYTLAVHLRMTGRLVY----CAGQDPPARHTHVIFNLSNGCQ-----LHFADM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T ++ LG EP + F +L + ++++ +K LL+Q +AG Sbjct: 112 RQFGRIWLVPTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+++P R +L TP++I +L + I+ +L + I+ G+++RD+ Sbjct: 172 LGNIYADEALHRARINPERLATTL-----TPREI-ARLYRAIRDLLQEGIENRGTTVRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G +Q VY + G+PC CG I + GRS++YC CQK Sbjct: 226 IDGNGQAGNYQEFLQVYNREGKPC-PRCGDKIAKKKVGGRSSYYCPTCQK 274 >gi|92115085|ref|YP_575013.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Chromohalobacter salexigens DSM 3043] gi|91798175|gb|ABE60314.1| DNA-(apurinic or apyrimidinic site) lyase [Chromohalobacter salexigens DSM 3043] Length = 281 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 150/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I + + LR P + G +I ++ RRAKYL Sbjct: 11 MPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRIGELGRRAKYL 70 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + G +++ HLGMSGS + P K H+HV + L + Y+DPR Sbjct: 71 LMPV-GAGTLLWHLGMSGSLRLARLG-DLPRK---HDHVDLVLEGGAILR-----YHDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+D ++ S P L LGPEP F+ L K+ +K L++ +V G+ Sbjct: 121 RFGFVDWLQGS-PLDDPRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGV 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L + + VL AI GG++LRD+V Sbjct: 180 GNIYASEALFLAGIDPRRAAGRISRER------YERLAEAARDVLAAAITQGGTTLRDFV 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF +VYG+ PC CG+++R + R++ +C +CQ+ Sbjct: 234 SGTGEPGYFAQRLNVYGRHDAPC-RRCGELLRLVTLGQRASVFCPHCQR 281 >gi|171318636|ref|ZP_02907782.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|172061757|ref|YP_001809409.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] gi|238689132|sp|B1YN48|FPG_BURA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171096144|gb|EDT41067.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|171994274|gb|ACB65193.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] Length = 275 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHAREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|227524688|ref|ZP_03954737.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] gi|227088172|gb|EEI23484.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] Length = 280 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 155/293 (52%), Gaps = 26/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L+ K + P F+ A + + I + RR KY Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLP-PEDFTNALKNQIIKKIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L I + L+I+ HL M G + +E P P +H H+ LT+ + YN Sbjct: 60 LFIRINNGLTIVSHLRMEGKYDVE------PEGTPLSKHTHIVFHLTDGRQLR-----YN 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q + Sbjct: 109 DTRKFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNI 168 Query: 178 AGIGNIYVCEALWRAKLSPIR--KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 AG+GNIY E LW +K++P + T S+++ K + +I EI++ AID G++ Sbjct: 169 AGLGNIYADEVLWLSKINPKQPVNTLSVVE----LKLLRKSIIDEIKR----AIDGHGTT 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + Y + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 221 VHSYSNAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK] gi|315445100|ref|YP_004077979.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|189044665|sp|A4TE57|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum PYR-GCK] gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 282 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T++ + +H R R + P +A I RR Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++VHLGMSG ++ P++N H + + L + T + Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLL------GPVRNENHLRIAVLLDDGTALS-----FV 109 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLV P+ + +P D F+ + + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E+LWRAK++ R +G K L +L+ V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADESLWRAKINGARLA------SGVSKAKLAELLDAATDVMTDALAQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSFYCPRCQ 277 >gi|317125434|ref|YP_004099546.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315589522|gb|ADU48819.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 292 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 158/294 (53%), Gaps = 23/294 (7%) Query: 1 MPELPEVEIIRRNLM--MVMKNMT---VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L+ +V +++T +T + + R+++ P + G + SR Sbjct: 1 MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAG--PEDLADRVSGTTVTAASR 58 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL + L+G+ ++I+HLGMSG ++ KP P+ H + + + R + Sbjct: 59 RGKYLWLVLDGDEALIIHLGMSGQMLV------KPADAPREKHCHAAFDFADDGPQLRFV 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + L +R + P+P + F+ + + + + S +K ALL+Q Sbjct: 113 --DQRTFGGLALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLDQS 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY EALWRA++ R SL K +L +++ ++V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADEALWRARVHGERVCASLT------KPVLSRVLDHAREVMAEALTQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G+ GYF + YG+ G PC CG +RR RS+F C CQ Sbjct: 225 FDALYVNVNGASGYFDRSLHAYGRDGTPC-DRCGARMRREQFMNRSSFSCPACQ 277 >gi|262379123|ref|ZP_06072279.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] gi|262298580|gb|EEY86493.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] Length = 276 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 162/290 (55%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 5 MPELPEVETTKKSLEPLLQQ-KVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 63 LAQFEHD-TMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + ET K P LGPEP +FN YL ++ K +K AL++ +V Sbjct: 112 RFGCILWLNHETQNKLIDP----LGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ ++ P + SL + + +L+ EI+++L AI+ GGS+LRD Sbjct: 168 GVGNIYATESLFNTRIHPAQPASSL------SYEQIDQLVIEIKRILKFAIELGGSTLRD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 222 YSNAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 270 >gi|257081124|ref|ZP_05575485.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] gi|256989154|gb|EEU76456.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] Length = 280 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHKADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|331685298|ref|ZP_08385884.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] gi|331077669|gb|EGI48881.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] Length = 269 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL + ++L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 167 VGNIYASESLFAAGIHPDRLASSL---SLAECELLARV---IKAVLLRSIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C CG I A R+TFYC CQK Sbjct: 221 LQSDGKPGYFAQELQVYGRKGESC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|317405473|gb|EFV85782.1| DNA glycosylase [Achromobacter xylosoxidans C54] Length = 281 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 149/292 (51%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ +T + +H +R+ P A G + + RR KYL Sbjct: 7 MPELPEVETTRRGIDAVITGRPLTRLVVHESRMRWPIPAELPALVGGHTVRECGRRGKYL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + + IVHLGMSGS S A +H+HV + +DPR Sbjct: 67 LLRFD-HGTQIVHLGMSGSL----RSVAPGEFLRKHDHVEWIFDQAV------LRLHDPR 115 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG +P L LG EP D F+ +L H F + +K LL V Sbjct: 116 RFGAVLWHPDADGPVENHPLLAKLGIEPFDPRFDGAWLHHHFKNHGAAIKQVLLAGMAVV 175 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P KT + N + +L ++ L DA+ +GGS+LRD Sbjct: 176 GVGNIYASESLFRARINP--KTPA----NKLSRARCDRLADMVRATLADALTSGGSTLRD 229 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC CG I+RIVQ R+T+YC CQK Sbjct: 230 YVGATGEPGAYFEIHAAVYERAGQPC-RVCGTPIKRIVQGQRATYYCPKCQK 280 >gi|290953522|ref|ZP_06558143.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] gi|295313214|ref|ZP_06803873.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] Length = 270 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 157/284 (55%), Gaps = 15/284 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ IK H+H+ ++L++N + ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKIK---HDHIVVTLSDNLS-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEAA------NLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + +G GYF +VYG+ + C C I+ +V A R+TF+ Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCYV-CNTKIQSLVIAQRNTFFS 269 >gi|29375464|ref|NP_814618.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227554990|ref|ZP_03985037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229548815|ref|ZP_04437540.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255971331|ref|ZP_05421917.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255973950|ref|ZP_05424536.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256761635|ref|ZP_05502215.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256960004|ref|ZP_05564175.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256964300|ref|ZP_05568471.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|257083793|ref|ZP_05578154.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|257089290|ref|ZP_05583651.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257415443|ref|ZP_05592437.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis AR01/DG] gi|257418474|ref|ZP_05595468.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257421125|ref|ZP_05598115.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|293383757|ref|ZP_06629664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|293388767|ref|ZP_06633260.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|307271879|ref|ZP_07553147.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|307278425|ref|ZP_07559500.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|312904439|ref|ZP_07763598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|312907027|ref|ZP_07766023.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|312952853|ref|ZP_07771715.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|312978715|ref|ZP_07790442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|39931263|sp|Q837G3|FPG_ENTFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29342924|gb|AAO80688.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227175872|gb|EEI56844.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229306044|gb|EEN72040.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255962349|gb|EET94825.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255966822|gb|EET97444.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256682886|gb|EEU22581.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256950500|gb|EEU67132.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256954796|gb|EEU71428.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|256991823|gb|EEU79125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|256998102|gb|EEU84622.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257157271|gb|EEU87231.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG] gi|257160302|gb|EEU90262.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257162949|gb|EEU92909.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|291078833|gb|EFE16197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|291081924|gb|EFE18887.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|295113920|emb|CBL32557.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterococcus sp. 7L76] gi|306504931|gb|EFM74126.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|306511385|gb|EFM80387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|310627012|gb|EFQ10295.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|310629369|gb|EFQ12652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|310632137|gb|EFQ15420.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|311288422|gb|EFQ66978.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|315145153|gb|EFT89169.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141] gi|315148037|gb|EFT92053.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244] gi|315152952|gb|EFT96968.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031] gi|315155182|gb|EFT99198.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043] gi|315157510|gb|EFU01527.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312] gi|315163061|gb|EFU07078.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645] gi|315167986|gb|EFU12003.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341] gi|315171782|gb|EFU15799.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342] gi|315574208|gb|EFU86399.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B] gi|315577338|gb|EFU89529.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630] gi|315581649|gb|EFU93840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A] gi|323480060|gb|ADX79499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62] Length = 280 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|90414930|ref|ZP_01222894.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] gi|90323986|gb|EAS40582.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] Length = 269 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + VT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVVGQIVTKIIVRNPKLRWPIPEEIQQ-IEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +I VHLGMSGS + S I +H+HV + L++ + YNDPR Sbjct: 60 LLHTDVGYAI-VHLGMSGSLRVLPVS----IPPEKHDHVDLVLSSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L ++ L LGPEP + F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGAWLWELPDLDHKV--LSQLGPEPLSDDFTAKYLQDRAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + + + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEISAEK------IALFVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|170700383|ref|ZP_02891393.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] gi|170134727|gb|EDT03045.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] Length = 275 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDIRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|255318652|ref|ZP_05359883.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] gi|255304334|gb|EET83520.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] Length = 272 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 162/290 (55%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 1 MPELPEVETTKKSLEPLLQQ-KVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 59 LAQFEHD-TMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 107 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + ET K P LGPEP +FN YL ++ K +K AL++ +V Sbjct: 108 RFGCILWLNHETQNKLIDP----LGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVV 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ ++ P + SL + + +L+ EI+++L AI+ GGS+LRD Sbjct: 164 GVGNIYATESLFNTRIHPAQPASSL------SYEQIDQLVIEIKRILKFAIELGGSTLRD 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 218 YSNAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 266 >gi|260912781|ref|ZP_05919267.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] gi|260633159|gb|EEX51324.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] Length = 270 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ T+ +K+ +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGFIIEKIVVRQPKLRWMVSEELKQITQ-QKVTGLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I S + +H+H+ I + N + YNDPR Sbjct: 60 IIHTE-QCYIIGHLGMSGSLRI--VSPQDTVD--KHDHLDIVMNNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTDNLEEFHL--FLKLGPEPLSEEFNADYLWKKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + + +L++++++VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPEKAAGSLTKAQCS------QLVEQVKQVLTTAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG + ++ R++FYC CQK Sbjct: 222 QPDGRPGYFSQKLLVYGNKDKPC-PKCGTKVESLMIGQRNSFYCPKCQK 269 >gi|322389988|ref|ZP_08063527.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] gi|321143301|gb|EFX38740.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] Length = 288 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + + + K ++ D F G++I + RR KY Sbjct: 15 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDL-DAFCQDLPGQEIRVMGRRGKY 73 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L +L +I HL M G + P++ +H HV T+ + ++Y D Sbjct: 74 LLFYLT-DLVLISHLRMEGKYFFYPDEV--PLR--KHAHVFFHFTDGST-----LVYEDV 123 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG Sbjct: 124 RKFGTMEVLIPELVDSYFLAKKIGPEPTEADFKEPAFQVALKKSKKPIKSALLDQKLVAG 183 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+RAK+ P R +SL + E VL A++ GGS++R Y Sbjct: 184 LGNIYVDEVLYRAKVHPARLGQSLTAREAK------AIRNETIAVLAQAVEKGGSTIRSY 237 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 238 SNAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 286 >gi|222475256|ref|YP_002563672.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] gi|222419393|gb|ACM49416.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] Length = 292 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 150/287 (52%), Gaps = 22/287 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 14 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + H +P +H+HV + L + V++NDPR Sbjct: 74 VFVLSRGERVMFHLGMSGR--MAHV---RPYVREKHDHVALLLDGG-----FHVVFNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV Y+ R +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 124 RFGAVLLVNFQ-AYENIASR-IGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 179 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ G FQ F VY + G+PC + CG I + GRSTF+C C Sbjct: 233 IPTGAAGGFQQHFMVYQRAGQPC-NVCGARILSERRGGRSTFFCALC 278 >gi|148976962|ref|ZP_01813617.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] gi|145963836|gb|EDK29096.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] Length = 258 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 139/267 (52%), Gaps = 20/267 (7%) Query: 22 TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFI 81 T+ + LR+D P G+ I +SRRAKYLLIE + + IVHLGMSGS Sbjct: 11 TIKTLTFRTPKLRWDIPQELKK-LEGQVIRAISRRAKYLLIETDTG-TAIVHLGMSGSLR 68 Query: 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT 141 + +H+HV + LTN + YNDPRRFG + ++ + L Sbjct: 69 VLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPRRFGAW--LWSAPDEVHSVLLG 117 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 GPEP + FNA Y+ + K+ +K +++ K+V G+GNIY EAL+ A++ P+R Sbjct: 118 SGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSARIHPLRSA- 176 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 N K L EI++VL AI GG++L+D+ DG GYF VYGK GE Sbjct: 177 -----NKVTKAEWILLTDEIKQVLATAIKQGGTTLKDFSQADGKPGYFAQELQVYGKAGE 231 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 C S C +I+ + R+TFYC CQ Sbjct: 232 KCPS-CEALIQELKIGQRNTFYCEECQ 257 >gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|166215635|sp|A0QV21|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 154/295 (52%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H R R + P +A +I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ PI++ +H + L + T + + Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLL------GPIRDTRHLRIAAVLDDGTA-----LSFV 109 Query: 118 DPRRFGFMDLVE--TSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG L E T P P+ + +P D F+ + K+S +K LL+Q Sbjct: 110 DQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR K++ R +L P+ L +L+ +V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADEALWRTKINGARIAAAL------PRRRLAELLDAAAEVMTDALGQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSFYCPRCQ 277 >gi|93279440|pdb|2F5N|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic1 gi|93279443|pdb|2F5O|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling G:c Base Pair Ic3 gi|93279446|pdb|2F5P|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic2 Length = 274 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + ++I HL M G + + S +P++ H HV T+ + + Y Sbjct: 60 KFLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +V Sbjct: 110 DVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 AGFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 TYVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|307286687|ref|ZP_07566773.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|306502165|gb|EFM71449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|315165260|gb|EFU09277.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302] Length = 280 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + + +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKYEFHQVDD----EIAKHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|186475088|ref|YP_001856558.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] gi|238689441|sp|B2JCP3|FPG_BURP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|184191547|gb|ACC69512.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] Length = 276 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 152/292 (52%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRRVERVDVRTPALRWPIPPGFARLLHGRLVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P +H+HV + + + + DPR Sbjct: 61 LFEIDEGW-FIVHLGMTGTLRVLR-NVPHPPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + S +P L LG EP SF+ L + + ++K ALL +IV Sbjct: 113 RFGAVLWHPRSAGDVLDHPLLADLGVEPFAPSFSGALLHRKTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSLR 237 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+LR Sbjct: 173 GVGNIYASESLFRAGIRPTTPA-------GRISLVRYDLLADAVRVTLAAAIEKGGSTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V +G GYFQ + VY + G+PC CG I++IVQ RST+YC CQ+ Sbjct: 226 DFVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIKQIVQGQRSTYYCPTCQR 276 >gi|46143899|ref|ZP_00133897.2| COG0266: Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209444|ref|YP_001054669.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae L20] gi|166215606|sp|A3N3S8|FPG_ACTP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126098236|gb|ABN75064.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 273 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ I++HLGMSGS I + +P +H+HV + + + YNDPR Sbjct: 60 ILHTTQG-DILIHLGMSGSLGILQEN-QQPAG--KHDHVDLITQDGMVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGCW--LWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A+L P L N T K +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAELHP-----ELAAQNLTEKQC-ERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C ++CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEAC-NDCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|229546724|ref|ZP_04435449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256854275|ref|ZP_05559639.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|307275296|ref|ZP_07556439.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|307290894|ref|ZP_07570784.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|229308073|gb|EEN74060.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256709835|gb|EEU24879.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|306497964|gb|EFM67491.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|306507930|gb|EFM77057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|315029748|gb|EFT41680.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000] Length = 280 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQIALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|332139465|ref|YP_004425203.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693292|sp|B4S2C6|FPG_ALTMD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|327549487|gb|AEA96205.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 269 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P A G+K+ V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITRVVVRERRMRWPIPQEV-AKVEGQKVTAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S P+ +H+HV I L+ + +NDPR Sbjct: 60 LIETAQG-TLILHLGMSGKLRVIDAST--PVI--KHDHVDIVLSTGKCLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + P L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGA--VLYQAPDTHIPMLDNLGPEPLTDDFDDTRLFTLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R G YK L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAA-------GNISAARYKSLTATIKQVLAKAIEQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC + CG+ I V R+TF+CT CQ+ Sbjct: 221 AQTDGKPGYFAQHLNVYGRKGEPCEA-CGKAIESKVIGQRNTFFCTRCQR 269 >gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] Length = 274 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNV----VPRGEDQGKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEESTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL D + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLT------TDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|226951692|ref|ZP_03822156.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] gi|226837557|gb|EEH69940.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] Length = 273 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLL-TQRVQSVKVLNASLRWPIPDNLEKLV-GQRLTALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CEPNDALRKHDHLIIDFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q + TLGPEP FNA YL + KKN +K AL++ IV G+ Sbjct: 108 RFGCILWLDPD--NQSKLIDTLGPEPLSEDFNANYLREKLSKKNVGIKIALMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L K + KL+ E++++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNIGVHPAQPASTLT------KVQVEKLVIEVKRILKHAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|167585427|ref|ZP_02377815.1| formamidopyrimidine-DNA glycosylase [Burkholderia ubonensis Bu] Length = 276 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 154/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + T+ A +H+H+ + ++ + Y DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPTAGAP-PAAAKHDHI------DWIFDEFVLRYRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F+ L + ++ ++K ALL IV Sbjct: 113 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRSVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----AAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG +R+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|294138884|ref|YP_003554862.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] gi|293325353|dbj|BAJ00084.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] Length = 271 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 151/290 (52%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLVGQQVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + + +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAG-TTIVHLGMSGSLRI----VPRSTQVEKHDHIDLELASGKILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EEAHPLLSKLGPEPLKDNFTPKYLFDSLRNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+ A + P Q DI L L+ +++++L AI GG++L+D Sbjct: 169 GNIYANEALFAAGIHP--------QTEAGRLDIERLTILVTQVKQILASAIKQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + DG GYF VYG+ G+ C + CG ++ I R+T +C CQ Sbjct: 221 FTNADGKPGYFAQKLHVYGRGGDTC-TQCGNLLSEIKLGQRATVFCGICQ 269 >gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 284 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 155/292 (53%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++R L+ + TV+D+ L ++LR P F+ RG+ ++D RR Sbjct: 1 MPELPEVEVVRLGLVDHVVGRTVSDVRVLDARSLRRHLPGPVDFADRLRGRTVVDACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +I + +P+H V + L + T R+ + Sbjct: 61 KYLWLPLDDGSALTAHLGMSGQMLI----GTEQTPDPRHLRVGLDLDDGT-----RLHFV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + + + +P D +F+A + + ++ + +K ALL+Q +V Sbjct: 112 DQRIFGGLAVSDQVSDGVPAAMAHIARDPLDPAFDAEEFSARLRRRQTGVKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWR L R TR L + + L++ + V+ A++ GG+S Sbjct: 172 SGIGNIYADEALWRVPLHYARNTRHLRRAE------IDALVEHVTDVMRAALEQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GEPC C +RR RS+F+C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLHAYGREGEPC-DRCTTPMRRSPFMNRSSFWCPACQ 276 >gi|312901579|ref|ZP_07760852.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] gi|311291374|gb|EFQ69930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] Length = 280 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLASFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWHAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|257086218|ref|ZP_05580579.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|256994248|gb|EEU81550.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|315027065|gb|EFT38997.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137] Length = 280 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLSGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWHAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|227543927|ref|ZP_03973976.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300909676|ref|ZP_07127137.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] gi|227186078|gb|EEI66149.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300893541|gb|EFK86900.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] Length = 276 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L +L++I HL M G + +PI P +H HV T+ T + Y D Sbjct: 61 LFRFTNDLTMISHLRMEGKYY------NQPIGGPIDKHTHVVFEFTDGTE-----LCYQD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VA Sbjct: 110 TRKFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLNQRHVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW ++P + +L + + +L + I K L AI G+++ Sbjct: 170 GLGNIYVDEVLWMTGINPEQPANTLTASQ------ITELRKNIIKELATAIKYKGTTVHS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 224 FTNAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|116333678|ref|YP_795205.1| formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] gi|116099025|gb|ABJ64174.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] Length = 286 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ T+ + + + F+A +KI + RR KYL Sbjct: 1 MPELPEVETVRRGLTRLVQGATIAHVEVRYPKMVTPDADVFTAELISRKIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L G+L+++ HL M G + ++ P +P +H HV LT+N + Y D Sbjct: 61 LFRFSGDLTMVSHLRMEGKYDVQ------PEGSPVSKHTHVIFHLTDNRELR-----YTD 109 Query: 119 PRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M LV T + P L LGPEP + Y+ F K + +K LL+Q + Sbjct: 110 TRKFGRMQLVPTGEETTLAPSLGKLGPEPTAETLTLAYMVKIFGKSHKVVKPFLLDQTRI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E LW +K++P+ +L TP L +L Q I + AI G+++ Sbjct: 170 AGLGNIYADEVLWLSKINPLTPVDTL-----TPSQ-LSELRQNIIDEMALAIGGHGTTVH 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN VYG+ GEPC CG + +I A R T +C +CQ Sbjct: 224 SFSTAFGEAGQFQNQLHVYGREGEPC-ERCGTELVKIKVAQRGTHFCPHCQ 273 >gi|322391813|ref|ZP_08065278.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] gi|321145293|gb|EFX40689.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] Length = 274 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ +++I + + K ++ D + F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKIDL-YEFKRELPGQVIQSMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + +I HL M G + + +H H+ I T+ ++Y D Sbjct: 60 LIFYLSDKV-LISHLRMEGKYFY----YPDQVPERKHAHLFIQFTDGGT-----LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG Sbjct: 110 RKFGTMELLAPELLETYFLSKKLGPEPTEQDFDLPTFQKALQKSKKPIKSHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LWRAK+ P R + SL K+ E KVL A++ GGS++R Y Sbjct: 170 LGNIYVDEVLWRAKIHPSRLSNSLTAQEAR------KVHDETIKVLGQAVEKGGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S CG MI +I GR T +C CQ+ Sbjct: 224 TNAFGEDGTMQEFHQVYDKAGQEC-SRCGAMIEKIQLGGRGTHFCPTCQR 272 >gi|253999709|ref|YP_003051772.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] gi|253986388|gb|ACT51245.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] Length = 272 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTMRGLAPLV-GQPVAKVVIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++HLGMSG + A+ +H+H + + + DPR Sbjct: 60 LAQFDTGY-LMLHLGMSGRICL----LAQDEPAAKHDHFDLHFADGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + Q+ L LGPEP +++F+ +L QF +++ +KNA+++ +V G+ Sbjct: 110 RFGAV-LWAGAEPEQHALLSVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L + +L EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPQTPANQLS------RQACDRLAAEIKATLTDALAAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYFQ + Y +TGE C C I+ + RSTF+C CQ Sbjct: 223 GADGNPGYFQQEYFTYARTGEAC-KICSTPIQNVRLGQRSTFFCPRCQ 269 >gi|326405934|gb|ADZ63005.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis CV56] Length = 272 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRDLEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + S P++ +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL--ASLNVPME--KHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 225 AL-GSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|28378223|ref|NP_785115.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257325|sp|Q88WV4|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28271058|emb|CAD63963.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 274 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNV----VPRGEDQGKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL D + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLT------TDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|115352909|ref|YP_774748.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria AMMD] gi|115282897|gb|ABI88414.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia ambifaria AMMD] Length = 284 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 70 LFEVDAGW-FIVHLGMTGTLRV-LPAAGVPVAA-KHDHI------DWIFDEFVLRFRDPR 120 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 121 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 181 GVGNIYASESLFRAGIRPTTAAGKV----SLPR--YERLADAVRATLADAIERGGSTLRD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 235 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 284 >gi|296876082|ref|ZP_06900136.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] gi|296432793|gb|EFH18586.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] Length = 274 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + + + K ++ D F G++I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDL-DAFRQDLPGQEIRVLGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 LL L +L +I HL M G + P + P +H H+ T+ + ++Y Sbjct: 60 LLFYLT-DLVLISHLRMEGKYFF------YPDEVPFRKHAHIFFHFTDGST-----MVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+++ Y + +GPEP + F K +K+ALL+QK+V Sbjct: 108 DVRKFGTMEVLVPEFIDSYFLTKKIGPEPTEADFKEQAFQAALKKSKKPIKSALLDQKLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E L+RAK+ P R +SL + +E VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLYRAKVHPARLGQSLTAREAK------AIRKETIAVLAQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 222 SYSNAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|116511212|ref|YP_808428.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11] gi|116106866|gb|ABJ72006.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactococcus lactis subsp. cremoris SK11] Length = 272 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I + RR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGILRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ ++ ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPRE----KHDHLTMKFSDG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVIPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++ L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKEANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 AL-GSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|307728386|ref|YP_003905610.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] gi|307582921|gb|ADN56319.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] Length = 276 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 151/293 (51%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRKVERVEVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L E + IVHLGM+G+ ++ H A +H+HV + + + + DP Sbjct: 61 LFETDSGW-FIVHLGMTGTLRVLRHVPHAP--AAAKHDHVDWIFDD------FILRFRDP 111 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 112 RRFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV-LIDAIDAGGSSL 236 G+GNIY E+L+RA + P G + Y L+ + +V L AI+ GGS+L Sbjct: 172 VGVGNIYASESLFRAGIRP-------TTAAGRVSLVRYGLLADAVRVTLAAAIEKGGSTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V +G GYFQ + VY + G+PC C IR+IVQ RST++C+ CQ+ Sbjct: 225 RDFVGSNGESGYFQLDYFVYDRAGQPC-RVCATPIRQIVQGQRSTYFCSTCQR 276 >gi|146328737|ref|YP_001210018.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] gi|166215622|sp|A5EXK6|FPG_DICNV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146232207|gb|ABQ13185.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] Length = 272 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 159/291 (54%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L ++ T+T + + LR + +I +++RRAKYL Sbjct: 1 MPELPEVETCKKGLRPLLCQKTITAVDVRAARLREPLDAIALSQLIHCQITEITRRAKYL 60 Query: 61 LIEL-EGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +I + +++++VHLGMSGS ++ T +PIK +H+H+ I+L + Y + Y+D Sbjct: 61 IININREDIAVLVHLGMSGSLRVLPQT---EPIK--KHDHIIITLNDG-----YSLRYHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + ++ L+ LG EP D+S L K+ + + ++NQ I+ Sbjct: 111 PRRFGLFTVFHAQKPHRL--LQHLGIEPLDDSCTGDVLHQHCQKRKIKINSLIMNQNIIV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ + + P R ++L L+ +I+ +L AI GG++LRD Sbjct: 169 GIGNIYATEALFLSGIRPDRPAQTLSAAECA------SLMAQIKTLLTAAIARGGTTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ VYGK+G+ C CG ++ + + R T YC +CQ+ Sbjct: 223 FSAPDGHAGYFQQQLHVYGKSGQHC-PKCGNILEDLKISNRGTVYCPHCQR 272 >gi|312797351|ref|YP_004030273.1| Formamidopyrimidine-DNA glycosylase [Burkholderia rhizoxinica HKI 454] gi|312169126|emb|CBW76129.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Burkholderia rhizoxinica HKI 454] Length = 285 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 151/292 (51%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + + I V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPYVAGRRVQRVEVRNFALRWPVPATLARELEQRVIHKVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL+ +IVHLGM+G+ + A P P H I + ++R DPR Sbjct: 70 LFELDDGW-LIVHLGMTGTLRVLRNLPALP---PAARHDHIDWVFDEFVMRFR----DPR 121 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++P L +LG EP ++F+ L + + ++K AL+ IV Sbjct: 122 RFGAVLWHPRASGDVLEHPLLASLGVEPFSSAFSGALLHRRTRGRTVSIKQALMAGDIVV 181 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLR 237 G+GNIY E+L+RA + P + P+ Y+L+ + I+ L AID GGS+LR Sbjct: 182 GVGNIYASESLFRAGIRP----STPAGRVSLPR---YELLADAIRATLAAAIDKGGSTLR 234 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V G GYFQ + VY + G PC + CG IR IVQ RST+YCT CQ+ Sbjct: 235 DFVGSHGESGYFQLDYFVYDRAGRPCHA-CGVPIRHIVQGQRSTYYCTRCQR 285 >gi|312963651|ref|ZP_07778132.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] gi|311282160|gb|EFQ60760.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] Length = 270 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + T + +H HV I L + + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVETG----MPAAKHEHVDIELESGLSLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSQDPHNHELLIRLGPEPLTDLFDGERLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAA------GGISRGRYLKLAVEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQ 269 >gi|313891294|ref|ZP_07824912.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] gi|313120361|gb|EFR43482.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] Length = 273 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVVGKCIESVTVKVPKMIVSNPETFAGDLAGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +I HL M G +++ + + +H HV + + ++Y D R Sbjct: 61 IFRFS-DLLMISHLRMEGKYLLFEGA----VPENKHFHVFFHFRDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F ++K LL QK+VAG+ Sbjct: 111 KFGTLELIARDGLDLYFSQRKLGPEPTKNEFKLKIFETALRLSKKSIKPLLLEQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P+R L K + ++ + +L AID GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLAADL------KKAEIKRIHDQTVAILAFAIDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T YC CQK Sbjct: 225 NTLGMDGSMQDYLQVYGQTGKPC-PRCGSAILKLKVGGRGTHYCPKCQK 272 >gi|15672335|ref|NP_266509.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] gi|13878494|sp|Q9CIK4|FPG_LACLA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12723222|gb|AAK04451.1|AE006272_5 formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] Length = 272 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + S P++ +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL--ASLNVPME--KHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 225 AL-GSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|149922617|ref|ZP_01911045.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816503|gb|EDM76000.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 286 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 146/296 (49%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR L V + NLR + H RG V RR Sbjct: 1 MPELPEVESVRRGLARARLKTPVVKLWRSSFNLRTGKNWLRKHEGLEQLRGATPGPVRRR 60 Query: 57 AKYLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KY+L + EG L +++HLGMSG + +PI + H H + ++ + Sbjct: 61 GKYILWHMQGADEGELVLLIHLGMSGRCGVARAD--QPIVD--HTHFIATFADDRQLR-- 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + DPRRFG + + Y+ P+ LGPEP F+ L K L++ALL Sbjct: 115 ---FVDPRRFGGLKVGTRETIYEREPVAALGPEPLSEDFDGAVLEAALGKSKRALRDALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAGIGNIY EA + A+L+P+R SL + + + KL + VL + G Sbjct: 172 DQRAVAGIGNIYAVEACFEARLNPLRPAASLSRRSWS------KLADALVLVLERGVRNG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++L+D+ ++ G +G Q+ VYG+ GEPC CG+ + V RS CT CQ Sbjct: 226 GTTLKDFRNVVGEVGRNQDDLRVYGRGGEPC-PRCGRRLADFVSQNRSGVMCTRCQ 280 >gi|297565906|ref|YP_003684878.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] gi|296850355|gb|ADH63370.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] Length = 274 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 103/293 (35%), Positives = 144/293 (49%), Gaps = 31/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + T+ + H R+ + G+K++ +RR KY+ Sbjct: 1 MPELPEVETTRRILEPYLLGQTIQKLS-HSDPTRY----RHTELAHGRKVLGTTRRGKYM 55 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +LEG L I+HLGM+G F HT H +T+ L T + Y DP Sbjct: 56 LWQLEGGLEAIIHLGMTGGFRFTPHT----------HTRLTVELPGRT------LYYTDP 99 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG +VE + L +GPEP F +K LL Q+ VAG Sbjct: 100 RRFGKWWVVEAGNYREIDLLGRIGPEPLSQEFTLPQFQRVLAGTRRRIKEVLLGQEAVAG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 IGNIY E+LW++++ P R +L P ++ +L + I+ V+ A++AGGS+L D Sbjct: 160 IGNIYADESLWQSRIHPERPANTL-----KPAEV-KRLYKAIRDVMGRAVEAGGSTLSDN 213 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G GYFQ + YG+ G+ C C I RIV GR T +C CQ+ Sbjct: 214 SYQQPTGESGYFQFEHNAYGRPGQRCKRPGCTGKIARIVVGGRGTHFCPNCQR 266 >gi|208807998|ref|ZP_03250335.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] gi|208727799|gb|EDZ77400.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] Length = 270 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVA 178 RRFG + T + L LGPEP + FN YL + K K +K L++ K+V Sbjct: 109 RRFGAW--LWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKEKKRTIKPWLMDNKLVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R SL + ++L ++I+ VL+ +I+ GG++L+D Sbjct: 167 GVGNIYASESLFAAGIHPDRLASSL---SLAECELLARVIK---AVLLRSIEQGGTTLKD 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 221 FLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 270 >gi|53724080|ref|YP_104600.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121599146|ref|YP_991435.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124384583|ref|YP_001027489.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10229] gi|167001041|ref|ZP_02266842.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|238561326|ref|ZP_00442180.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|254175289|ref|ZP_04881950.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|254201689|ref|ZP_04908053.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|254207021|ref|ZP_04913372.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|254357500|ref|ZP_04973774.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|262193291|ref|YP_001082455.2| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10247] gi|81684913|sp|Q62FC7|FPG_BURMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215615|sp|A2S6C0|FPG_BURM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215616|sp|A1UZN2|FPG_BURMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52427503|gb|AAU48096.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121227956|gb|ABM50474.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124292603|gb|ABN01872.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10229] gi|147747583|gb|EDK54659.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|147752563|gb|EDK59629.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|148026564|gb|EDK84649.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|160696334|gb|EDP86304.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|238524786|gb|EEP88217.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|243063112|gb|EES45298.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|261835059|gb|ABO05590.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10247] Length = 272 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPPPAPA-KHDHV------DWIFDEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP F+A L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEP----FSAALLFGRTRGRTVSVKQALLAGDIVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 169 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLADAIERGGSTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 223 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 272 >gi|327534460|gb|AEA93294.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF] Length = 280 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 153/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] Length = 291 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATR--GKKIIDVSRRA 57 MPELPEVE++RR L + TV + LH + +R P A R G+++ RR Sbjct: 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL ++L G +++ HLGMSG +++ P+ P H+ + + + + R + Sbjct: 61 KYLWVDLSGGEAVLAHLGMSGQMLVQ------PVGAPDEKHLRVRVVFEDDGPELRFV-- 112 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + +LVE + + + +P D F+A + +++K ALL+Q Sbjct: 113 DQRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY E+LWRA+L +R T L +L+ +V+++A+ GG+ Sbjct: 173 TLVSGVGNIYADESLWRARLHGLRPTAKLTTAKTA------ELLGHATQVMLEALGQGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + +VYG+ PC + CG I R RS++ C CQ Sbjct: 227 SFDALYVNVNGQSGYFDRSLAVYGQEDRPC-ARCGTAIVREPFMNRSSYSCPRCQ 280 >gi|134296994|ref|YP_001120729.1| formamidopyrimidine-DNA glycosylase [Burkholderia vietnamiensis G4] gi|166215619|sp|A4JHZ1|FPG_BURVG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134140151|gb|ABO55894.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia vietnamiensis G4] Length = 275 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPADLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPVA-GVPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ Y + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFAYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|227513545|ref|ZP_03943594.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] gi|227083418|gb|EEI18730.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] Length = 280 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 154/292 (52%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L+ K + P F+ A + + I + RR KY Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLP-PEDFTNALKNQIIKKIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L I + L+I+ HL M G + +E P P +H H+ LT+ + YN Sbjct: 60 LFIRINNGLTIVSHLRMEGKYDVE------PEGTPLSKHTHIVFHLTDGRQLR-----YN 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG ++LV+T + L+T+GPEP + Y+ F K +K LL+Q + Sbjct: 109 DTRKFGRINLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNI 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSL 236 AG+GNIY E LW +K++P + +L + +L K +I EI++ AID G+++ Sbjct: 169 AGLGNIYADEVLWLSKINPKQPVNTL---SVVELKLLRKSIIDEIKR----AIDGHGTTV 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 222 HSYSNAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|193078273|gb|ABO13237.2| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 274 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|288553688|ref|YP_003425623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus pseudofirmus OF4] gi|120474|sp|P19210|FPG_BACFI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39475|emb|CAA37877.1| unnamed protein product [Bacillus firmus] gi|288544848|gb|ADC48731.1| formamidopyrimidine-DNA glycosylase [Bacillus pseudofirmus OF4] Length = 274 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ T+ I + N+ + F + I + RR K Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL E + ++ ++ HL M G + + +P+ P H HV T+ + Y D Sbjct: 61 FLLFEFD-DIVMVSHLRMEGRYGLYEKE--EPL--PPHTHVIFHFTDGEELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + L + F K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P R SL K+ + L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRARIHPERLAHSL------SKEEMAVLHKAIVSTLEEAVEMGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ EPC CG I + V GR T +C CQ Sbjct: 225 YVNGQGEMGMFQQKLGVYGRKNEPC-RQCGTDILKTVVGGRGTHFCPNCQ 273 >gi|93279449|pdb|2F5Q|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc2 gi|93279452|pdb|2F5S|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc1 Length = 274 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 153/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MP+LPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + ++I HL M G + + S +P++ H HV T+ + + Y Sbjct: 60 KFLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YR 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +V Sbjct: 110 DVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 AGFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 TYVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|239501755|ref|ZP_04661065.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB900] Length = 274 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NKKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGC--ILWLTPETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|167835381|ref|ZP_02462264.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis MSMB43] Length = 276 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVQRVDVRTAMLRWPVPAGFAELLRLREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+HV + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPNDAPP-PAPAKHDHV------DWIFDEFVLRFRDPR 112 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLAAAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAAIRQIVQGQRSTYFCPNCQR 276 >gi|329896521|ref|ZP_08271579.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] gi|328921738|gb|EGG29111.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] Length = 271 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N + ++ + LR+ P ++A G + + V RRAKY+ Sbjct: 1 MPELPEVETTCRGIEPHVLNKPICNVLVRDTRLRWPVPADLASALVGGQFLRVERRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ ++ HLGM+GS I + +P+K H+HV I + + Y+DPR Sbjct: 61 VLHHTDGF-VLAHLGMTGSMRI--VAAGEPVKT--HDHVDICFDDGAILR-----YHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L TLGPEP + F+ L + K +K +++ K+V G+ Sbjct: 111 RFGSIHWIAGQ-DLGHPLLDTLGPEPLSDDFSGRALYARSRGKTQAVKLFIMDAKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L Q I+++L AI GG++LRD+V Sbjct: 170 GNIYANEALFAAGIDPRRAAGKVSLAR------YQDLAQHIKRILSYAIARGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ +VYG+ G PC++ C + + + R+T +CT CQ+ Sbjct: 224 GGDGKPGYFKQELTVYGRAGLPCVT-CSKPLHEVRLGQRTTVFCTACQR 271 >gi|297191815|ref|ZP_06909213.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] gi|297151083|gb|EFH30953.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] Length = 286 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ LH + +R P F+A G+ + D RR Sbjct: 1 MPELPEVEVVRRGLQSWVSGRTIADVQVLHPRAIRRHLPGAQDFAARLTGRTVGDARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + L + + SI+ HLGMSG ++ EH + +H + I T+ T+ + Sbjct: 61 KYLWLPLADTDTSILGHLGMSGQLLVQPEHAD------DEKHLRIRIRFTDPLATE---L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + L E + L + +P D F+ + + +K ALL+Q Sbjct: 112 RFVDQRTFGGLSLHENAPDGLPDVLAHIARDPLDPLFDDAAFHTALRARRTTVKRALLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EALWRAKL R T +L + P+ + +L++ +++V+ A+ GG+ Sbjct: 172 SLISGVGNIYADEALWRAKLHYERPTATLTR----PRSV--ELLRHVREVMTAALAVGGT 225 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 226 TFDSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 280 >gi|113972208|ref|YP_736001.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-4] gi|117922515|ref|YP_871707.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. ANA-3] gi|123129981|sp|Q0HDC3|FPG_SHESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198751|sp|A0L2N2|FPG_SHESA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113886892|gb|ABI40944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. MR-4] gi|117614847|gb|ABK50301.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. ANA-3] Length = 271 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLVIRNASLRWPVPE-LAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + +P L LGPEP ++FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCQLP-EEAHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 219 KDFTNAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|322509311|gb|ADX04765.1| mutM [Acinetobacter baumannii 1656-2] Length = 274 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|184159399|ref|YP_001847738.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|332876239|ref|ZP_08444014.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] gi|183210993|gb|ACC58391.1| Formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|323519338|gb|ADX93719.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii TCDC-AB0715] gi|332735511|gb|EGJ66563.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] Length = 274 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|169794826|ref|YP_001712619.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|215482373|ref|YP_002324555.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|301510336|ref|ZP_07235573.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB058] gi|332852280|ref|ZP_08434085.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332870503|ref|ZP_08439267.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] gi|169147753|emb|CAM85616.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|213988590|gb|ACJ58889.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|332729410|gb|EGJ60750.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332732240|gb|EGJ63508.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] Length = 274 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|166215633|sp|A0QJ66|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 283 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 152/296 (51%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + +++VHLGMSG ++ P+ HV IS + T + + Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAV--------PRAEHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DL+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|322385832|ref|ZP_08059475.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] gi|321270117|gb|EFX53034.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] Length = 274 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRIRYAKMIGTGVDAFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGEV-LVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEPYFAARKLGPEPTDSEFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAQIHPARPAASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGIPIEKIKLGGRGTHLCPHCQK 272 >gi|241661900|ref|YP_002980260.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] gi|240863927|gb|ACS61588.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] Length = 291 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/303 (35%), Positives = 151/303 (49%), Gaps = 26/303 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLIPHITERRIVRVVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIEL--EGNLS----------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LIE E S +++HLGM+G+ + T+ + H+HV I L T Sbjct: 61 LIECMPEAEQSGGCAETAGGWLLIHLGMTGTLRVLETAVPPGL----HDHVDIELAGATG 116 Query: 109 TKKYRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + Y DPRRFG + + ++P LR LG EP D F+ ++ + + Sbjct: 117 VP-VTLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL IV G+GNIY E+L+RA + P + G P+ L + I+ L Sbjct: 176 IKSALLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRI----GRPR--YAALAEAIRATLA 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DAI GGS+LRD+V DG GYFQ VY + G PC CG +R+IVQ RSTFYC Sbjct: 230 DAIARGGSTLRDFVGSDGQSGYFQLDAFVYDRAGLPC-RVCGTPVRQIVQGQRSTFYCPT 288 Query: 287 CQK 289 CQ+ Sbjct: 289 CQR 291 >gi|114049458|ref|YP_740008.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] gi|123130915|sp|Q0HPK4|FPG_SHESR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113890900|gb|ABI44951.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] Length = 271 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLIVRNASLRWPVPE-LAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YND 118 LI+ + SI VHLGMSGS I+ H + P++ +H+H+ + L N R++ +ND Sbjct: 60 LIDTDAGTSI-VHLGMSGSLRILPHDT---PVE--KHDHIDLVLANG------RILRFND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + + +P L LGPEP ++FN L K +K L++ IV Sbjct: 108 PRRFGAWLWCQLP-EEAHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVV 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY EAL+ A + P + + DI L L+ E++++L AI GG++L Sbjct: 167 GVGNIYANEALFAAGIHPEAEAGKI--------DIERLTVLVAEVKQILAHAIKQGGTTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D+ + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 219 KDFTNAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|327470595|gb|EGF16051.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK330] Length = 274 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLF----YPDEVPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLSHFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|229593163|ref|YP_002875282.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] gi|259647147|sp|C3K3N6|FPG_PSEFS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229365029|emb|CAY53194.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] Length = 270 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----LPAAKHEHVDIELESGMALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSQDPHNHELLLRLGPEPLTELFDGDRLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R G + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAA------GGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQR 270 >gi|152965345|ref|YP_001361129.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] gi|189044663|sp|A6W7S6|FPG_KINRD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151359862|gb|ABS02865.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] Length = 308 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/315 (33%), Positives = 158/315 (50%), Gaps = 42/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV+ LH + R P A TRG + D RR Sbjct: 1 MPELPEVEVVRRGVARWVVGRTVSSARFLHPRVTRRHVAGPDDAGARTRGLVVADAVRRG 60 Query: 58 KYLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + L +++VHLGMSG ++E P+ H+ T + + Sbjct: 61 KYLWLPLATPDGRAEEAMVVHLGMSGQLLVEAADA------PEEKHLRAVWTFDDGGEDL 114 Query: 113 RVIYNDPRRFGFMDLV-----------------ETSLKYQYP-PLRTLGPEPADNSFNAI 154 R + D R FG + +V + S P P+ + +P D +F+ Sbjct: 115 RFV--DQRTFGGIAVVPLVATPDGGPGGLGETPDGSWSGSMPAPVAHIARDPLDPAFDDA 172 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + ++ + LK ALL+Q +V+G+GNIY EALWRAKL R TRS+ TP Sbjct: 173 VFARRLRERTTGLKRALLDQTLVSGVGNIYADEALWRAKLHYARPTRSV-----TPA-QA 226 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L+ +++V+ A+DAGG+S YV+++G+ GYF + +VYG+ G PC CG ++RR Sbjct: 227 AALLAGLREVMTAALDAGGTSFDSLYVNVNGASGYFDRSLAVYGQEGRPC-PRCGALVRR 285 Query: 274 IVQAGRSTFYCTYCQ 288 RS+F C CQ Sbjct: 286 DAFMNRSSFSCPVCQ 300 >gi|319946541|ref|ZP_08020776.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] gi|319747287|gb|EFV99545.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] Length = 274 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L ++ T+ + + + K ++ D F G++I + RR KY Sbjct: 1 MPELPEVETVRLGLEKLILGKTIQSVEVKYPKMIQTDL-DAFRQDLPGQEIRAMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L +L +I HL M G + P++ +H HV T+ + ++Y D Sbjct: 60 LLFYLT-DLVLISHLRMEGKYFFYPDEV--PLR--KHAHVFFHFTDGST-----LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+++ Y + +GPEP + F K +K+ALL+QK+VAG Sbjct: 110 RKFGTMEVLVPEFIDSYFLAKKIGPEPTEADFKEPAFQAALKKSKKPIKSALLDQKLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+RAK+ P R +SL + + +E VL A++ GGS++R Y Sbjct: 170 LGNIYVDEVLYRAKVHPARLGQSLTARE------VKAIRKETIAVLAQAVEKGGSTIRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 224 SNAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|78067597|ref|YP_370366.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] gi|90101298|sp|Q39CU4|FPG_BURS3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77968342|gb|ABB09722.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] Length = 275 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTEMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P+ +H+H+ + ++ + + DPR Sbjct: 61 LFEVDAGW-FIVHLGMTGTLRVLPAD-GLPVAA-KHDHI------DWIFDEFVLRFRDPR 111 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPT----TAAGKVSLPR--YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC C IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCNTPIRQIVQGQRSTYFCPTCQR 275 >gi|218962135|ref|YP_001741910.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] gi|167730792|emb|CAO81704.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] Length = 267 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 160/292 (54%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ I +L V+K T+ I C + + + P +R + + RR K Sbjct: 1 MPELPEVQSIINDLEKVLKGKTIKTIECYYSGTVITNCLPEDNPFPSRA---LAIKRRGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++I LE + ++I+HL M+G I + T C +P+K + I L NN + D Sbjct: 58 YIIIMLERDNALIIHLRMTGKLIYD-TFCGEPLK---YERARIILENNEVLH-----FID 108 Query: 119 PRRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG + + + ++++ PPL G EP + F L + H K + +K AL++QKI+ Sbjct: 109 IRTFGKIVICSQKNIEHCLPPL---GLEPFSDDFTPKALKEKMHGKKAPIKIALMDQKII 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCE L+RA ++P + + + N + K+IQ+ ++VL +AID GG+S+ Sbjct: 166 AGLGNIYVCEILYRAGINPEKPANKITRKN------IVKIIQQTKEVLTEAIDKGGTSIS 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY ID G FQN VY K P G + R+ Q GRSTFYC CQK Sbjct: 220 DYRRIDDKPGSFQNFLQVYQKQFCP----LGHKVLRLKQGGRSTFYCPICQK 267 >gi|33594050|ref|NP_881694.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|161609281|ref|NP_887446.2| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] gi|39931242|sp|Q7VUG7|FPG_BORPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33564124|emb|CAE43396.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|332383467|gb|AEE68314.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis CS] Length = 275 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 147/294 (50%), Gaps = 25/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + + IVHLGMSGS + E + K H+HV + + +D Sbjct: 61 LLRFDHGVQ-IVHLGMSGSLRRVPEQEAPRK------HDHVDWVFDHAV------LRLHD 107 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 PRRFG E +P L LG EP D F+ +L F + +K ALL Sbjct: 108 PRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDA 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+RA + P R+ Q + +L I+ L DA+D+GGS+L Sbjct: 168 VVGVGNIYASESLFRAGIDP----RTAAQRVSAAR--CDRLAAAIRATLSDALDSGGSTL 221 Query: 237 RDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 222 RDYVGASGEPGAYFAIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYFCPSCQK 274 >gi|260557193|ref|ZP_05829409.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] gi|260409299|gb|EEX02601.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] Length = 274 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|81429015|ref|YP_396015.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] gi|90101304|sp|Q38VS5|FPG_LACSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78610657|emb|CAI55708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] Length = 278 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 141/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + TV+ I + + + F+A G++I V RR KYL Sbjct: 1 MPELPEVENVRRGLETLAVGKTVSAIDIRWSKIIVNPDEVFTAGLVGQQITAVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+++ HL M G + + AK +H HV T+ + Y D R Sbjct: 61 LIRFGEQLTVVSHLRMEGKYEV----VAKEAPISKHTHVIFEFTDGQQMR-----YLDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + L+ LGPEP +F + K + +K LL+QK+V G+ Sbjct: 112 KFGRMQLIETGQENTVAGLKDLGPEPTPTTFLKADFYQRLQKHHKAIKPLLLDQKVVTGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW + + P L + +L EI L AI+ GG+++ ++ Sbjct: 172 GNIYVDETLWLSHIHPETPANDLTRAETD------RLHDEIIAELELAINHGGTTVNTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ VYGK G PC CG I +I A R T +C CQ Sbjct: 226 NATGHAGAFQEMLHVYGKKGVPC-ERCGTPIEKIKVAQRGTHFCPKCQ 272 >gi|262281147|ref|ZP_06058929.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] gi|262257378|gb|EEY76114.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] Length = 274 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWAIPDDVHKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H I +++ + Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHFIIRF------EEHELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + + Q + TLGPEP N FNA YL + K+ K AL++ +V G+ Sbjct: 108 RFGC--ILWLNPETQGKLIDTLGPEPLSNDFNAEYLASKLKNKSVGTKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAADL------SLEQIEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ G+ C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGQMCV-NCETTLENLKLGQRASVFCPECQ 266 >gi|310641224|ref|YP_003945982.1| formamidopyrimidine-DNA glycosylase (fapy-DNA glycosylase) [Paenibacillus polymyxa SC2] gi|309246174|gb|ADO55741.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa SC2] Length = 276 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++V K++ + L R R D F+ G +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIDAFAMELAGHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+G L ++ HL M G + + S P++ +H HV + T + Y D Sbjct: 61 FLRILLDG-LVLVSHLRMEGRYGL--YSQDDPVE--KHTHVIFHFKDGTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQSYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLR 237 GIGNIYV E+L++A + P + +SL D ++++ E I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSL-------TDSQFRVLHEAIVSTLGASIQVGGSSIK 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 224 SFVNGQGKTGDFQHQLQIYGRNAKPCM-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|166198746|sp|A4FMJ7|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 29/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATR--GKKIIDVSRRA 57 MPELPEVE++RR + + TV+++ LH +++R P ATR G+ + RR Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60 Query: 58 KYLLIELEGNL-------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KY+ +EL G +++ HLGMSG +++ P + P H+ + + Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQ------PDEAPDETHLRVRFRFDDGGP 114 Query: 111 KYRVIYNDPRRFGFMDLVE--TSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + R + D R FG + L E + P P+ + P+P + F+ + K+ + + Sbjct: 115 QLRFV--DQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMRKRRTGV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q +V+GIGNIY EALWRAKL R T +L + + +L ++ +Q Sbjct: 173 KRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQA--RTLLVAAVEVMQA---- 226 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ AGG+S D YV+++G GYF + +VYG+ G PC CG +RR RS++ C Sbjct: 227 ALTAGGTSFDDLYVNVNGESGYFDRSLAVYGQAGLPC-PRCGTPVRRDAFMNRSSYSCPR 285 Query: 287 CQ 288 CQ Sbjct: 286 CQ 287 >gi|257869279|ref|ZP_05648932.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] gi|257803443|gb|EEV32265.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] Length = 280 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ N T+ ++ + + + P F+A +G++ RR K Sbjct: 1 MPELPEVETVRRGLEKLILNKTIKEMEIRWPRI-IESPEVPIFAAMLKGQQFQAFDRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L+ +L + +I HL M G + E +H HV T+ + + Y Sbjct: 60 FLIFKLT-DYDLISHLRMEGKYEFFEKEGVPD-----KHTHVIFQFTDGSE-----LHYR 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M LVE Y + LGPEP F T K +K LL+QK+V Sbjct: 109 DVRKFGRMTLVEKDQSSTYKGIMQLGPEPLPELFLLTDFTRDLKKSKKAIKPLLLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EALW AK+ P + +L N ++L++ I + VL A++AGG+++R Sbjct: 169 TGLGNIYVDEALWEAKIHPEQSAATL---NEAEINLLHRAIID---VLARAVEAGGTTIR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G+FQ + VYG+TG PC+ CG I + A R T YC +CQ+ Sbjct: 223 TYLNALGEAGHFQVSLHVYGQTGNPCV-RCGTPIVKTKVAQRGTHYCPFCQQ 273 >gi|187927361|ref|YP_001897848.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|309779938|ref|ZP_07674692.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] gi|229541081|sp|B2UES0|FPG_RALPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187724251|gb|ACD25416.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|308921297|gb|EFP66940.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] Length = 291 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 146/303 (48%), Gaps = 26/303 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLLPHITGRRIVRAVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIELEGNLS------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LIE + +++HLGM+G+ + T P+ H+HV I L T Sbjct: 61 LIECVPEVEQSGRAADTVGGWLLIHLGMTGTLRVLET----PVPPGLHDHVDIELAGATG 116 Query: 109 TKKYRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + Y DPRRFG + + ++P LR LG EP D F+ ++ + + Sbjct: 117 VH-VTLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL IV G+GNIY E+L+RA + P + + L I+ L Sbjct: 176 IKSALLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALADAIRATLA 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DAI GGS+LRD+V DG GYFQ VY + G PC + CG IR+IVQ RSTF C Sbjct: 230 DAIARGGSTLRDFVGSDGQSGYFQLEAFVYDRAGLPCRA-CGTPIRQIVQGQRSTFCCPT 288 Query: 287 CQK 289 CQ+ Sbjct: 289 CQR 291 >gi|307329835|ref|ZP_07608990.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] gi|306884564|gb|EFN15595.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] Length = 310 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 24/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ LH + +R P F+A RG++ V RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + + + + ++ HLGMSG +++ P + P H+ I + + + Sbjct: 61 KYLWLPFDDDAAAEAVLAHLGMSGQLLVQ------PAEAPDEKHLRIRV-RFADAAGTEL 113 Query: 115 IYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG + D V L+ + + +P D +F+ ++ + +K AL Sbjct: 114 RFVDQRTFGGLSLHDTVPGDLEGLPDAIAHIARDPLDPAFDEAAFHTALRRRRTTIKRAL 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ Sbjct: 174 LDQSLISGVGNIYADEALWRARLHYDRPTATLARPRAA------ELLGHVREVMTAALAV 227 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF+ + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 GGTSFDSLYVNVNGESGYFERSLDAYGRENEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 285 >gi|266618589|pdb|3GPP|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-T224p Complex gi|266618607|pdb|3GQ5|A Chain A, Sequence-Matched Mutm Interrogation Complex 5 (Ic5) Length = 273 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 21/291 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 PELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRP 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|332362411|gb|EGJ40211.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1056] Length = 274 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIDQVRVCYAKMIGTGADSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRAK+ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAKIHPARPADSL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|258515628|ref|YP_003191850.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] gi|257779333|gb|ACV63227.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] Length = 275 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L + + T+ ++ + R F G+KI +SRR KY Sbjct: 1 MPELPEVETIKRTLEPKLTGQSFTEALIYLPTIIRIPGIEEFKKEIVGQKIKSISRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L NL++I HL M+G I H +PI +H H+ + L + + + D Sbjct: 61 LTINLSNNLALIFHLRMTGRLIYCHAD--EPI--VKHTHLILKLDSGNELR-----FIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV L+ LGPEP D F +L + ++ + +K LL+Q +AG Sbjct: 112 RQFGRIWLVSVQKLNTVSGLKDLGPEPFDKKFTREFLKKELRRRRTRIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA++ P + +L + KL I++VL + I+ G++ RDY Sbjct: 172 LGNIYADEALHRARIHPEKLACNLTARETS------KLFITIREVLEEGINNRGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q +Y + G+PCL C I RI +GRS+++C CQK Sbjct: 226 VDGNGQAGSNQELLQIYNREGQPCL-KCKTTIVRIKISGRSSYFCPSCQK 274 >gi|170719527|ref|YP_001747215.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] gi|229541079|sp|B1J2M4|FPG_PSEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169757530|gb|ACA70846.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] Length = 270 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVQLG----LPAAKHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L + +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPLNHEL--LLRLGPEPLTDLFDGERLFQLSRGRTMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRTRYLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG +R R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGMPC-KLCGTTLREAKLGQRASVYCPRCQR 270 >gi|320352499|ref|YP_004193838.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] gi|320121001|gb|ADW16547.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] Length = 279 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 154/297 (51%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----HHFSAATRGKKIIDVSR 55 MPELPEVE+ RR L+ + TV + LR P H +A ++I + R Sbjct: 1 MPELPEVEVTRRGLLAPLSGRTVVRVSWSAHRLRGPIPRKLLQEHIAA----QQIRTIDR 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSG--SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 RAKYLL+ + +++HLGM+G I T+ K H+H+ + L N + + Sbjct: 57 RAKYLLLRMVNGAVLVIHLGMTGKLGLIQGQTTLHK------HDHLVLHLDNGLDVR--- 107 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 +ND RRFG + + Q R G EP +F A L + +K+ L Sbjct: 108 --FNDSRRFGSIVVWPPDHAAQLEADFSRKEGLEPFGPAFIADNLLALARGRRVAVKSLL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 +N +++AGIGNIY E L+ A+++P + L + ++IQE +++L AIDA Sbjct: 166 MNSRLIAGIGNIYANEILFAARIAPQQPAHLLTEKE------WGRIIQESRRILQLAIDA 219 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGSS+ D++ + G GYFQ +VYG+ PC CGQ I + +Q GR+T++C CQ Sbjct: 220 GGSSISDFLGVSGHPGYFQLQLAVYGRKDAPC-PRCGQAILKTIQGGRATYHCPGCQ 275 >gi|172058210|ref|YP_001814670.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] gi|229541071|sp|B1YKA0|FPG_EXIS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171990731|gb|ACB61653.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] Length = 276 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 150/291 (51%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + T++ + H K +R F A + ++I V RR K+ Sbjct: 1 MPELPEVETVRRSLERTVSGKTISSVKVFHPKMIRGMEVAPFVDALKQERIERVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL + ++ HL M G + + I+ +H HV T+ + + YND Sbjct: 61 LLFTFD-RFYLVSHLRMEGKYF----PYPQAIEKDKHTHVIFRFTDGSE-----LHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVA 178 R+FG M+L E PPL L EP D +F A L KK S +K +LL+Q I Sbjct: 111 RKFGTMELREKETAMSVPPLAQLEREPFDPTFTAEVLAENLIRKKRSPIKTSLLDQSIFL 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+ A++ P+ K +L ++ + ++ VL A+++GGS++R Sbjct: 171 GLGNIYVDETLFAARVHPLTKAGALTLDD------ISRIHAAGVDVLAKAVESGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G FQ +VYG+TG PC CG I +I GR T +C CQ+ Sbjct: 225 YVSPTGK-GEFQLQLAVYGQTGAPC-PRCGTAIEKIKVGGRGTHFCPTCQQ 273 >gi|260892909|ref|YP_003239006.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] gi|260865050|gb|ACX52156.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] Length = 269 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L + + + + R + + P GK I VSRR K+L Sbjct: 1 MPELPEVETIRRQLAEKVIGARIKRVEVRRAAVMTN-PIPGLDLLSGKTITGVSRRGKWL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LEG+L+++ HLGM+G + E + P H H+ I L R+ + D R Sbjct: 60 WLSLEGDLALLFHLGMTGQLVWEEEG-----ELPPHTHLLIELDRG------RLRFTDFR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ Y LGPEP +F+ YL + + +K LL QK VAG+ Sbjct: 109 RFGRVRLGKSEEIRDYLE-EKLGPEPLSPAFSVSYLKNALARSRRPIKALLLEQKAVAGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L + D + +L + I+ VL + I G+S+R+YV Sbjct: 168 GNIYTDEALFLAGIDPRRPACTLTE------DEVKRLHEAIKGVLAEGIRHRGTSIRNYV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G VYG+ G+PC CG I++I +GR T +C +CQ Sbjct: 222 DAEGTPGEHSLFLRVYGREGQPC-PRCGTPIKKIKLSGRGTHFCPHCQ 268 >gi|300859742|ref|ZP_07105830.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] gi|300850560|gb|EFK78309.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] Length = 280 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F + I + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLASQTIEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPAEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|171780160|ref|ZP_02921064.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281508|gb|EDT46943.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 273 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 149/292 (51%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F + G+ I + RR K Sbjct: 1 MPELPEVETVRRGLERLIVGREIVSVDVRVP-KMVKTDL-SAFESDLLGQTIQSIGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ L+ + II HL M G +++ EH + +H H+ L + + ++Y Sbjct: 59 YLLLNLDEQV-IISHLRMEGKYLLFEHQ-----VPEDKHFHIFFGLDDGST-----LVYK 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+LV + Y R LGPEP F+ T + +K LL+Q +V Sbjct: 108 DVRKFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LW AK+ P R Q N K + L EI ++L I GGS++R Sbjct: 168 AGLGNIYVDEVLWAAKIHPER------QANSLQKAEINLLHDEIIRILQLGIKKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKT EPC C I +I GR T +C CQK Sbjct: 222 TYQNALGENGTMQEYLQVYGKTDEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|152977704|ref|YP_001343333.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] gi|171472905|sp|A6VKA1|FPG_ACTSZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150839427|gb|ABR73398.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] Length = 270 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + + I + + LR++ S + +K+ +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLDGFYIEKIIVRQPKLRWEVSPELSQISH-QKVTALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I S P+ +H+H+ I + N + YNDPR Sbjct: 60 IIHTAQGY-IIGHLGMSGAVRI--VSPDSPVN--KHDHLDIVMNNGKIMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP FN+ YL + KK + +K+ ++N +V GI Sbjct: 110 RFGAWFWTENL--DEFPLFAKLGPEPLSGEFNSDYLFKKSRKKPTAVKSFIMNNAVVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L++ L P + + + L + I+K L AI GG++L+D++ Sbjct: 168 GNIYANEVLFQCGLHPEKPAGKITKTQAA------LLTETIKKELTRAIAQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC CGQ I R+++ C +CQK Sbjct: 222 QPDGKPGYFVQELQIYGKKGCPC-PKCGQKIESFTVGQRNSYVCLHCQK 269 >gi|281490900|ref|YP_003352880.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] gi|281374658|gb|ADA64178.1| Formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] Length = 272 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + S P++ +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL--ASLNVPME--KHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW K+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLEKIHPEKMANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 225 AL-GSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|33595501|ref|NP_883144.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis 12822] gi|39931245|sp|Q7W185|FPG_BORPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33565579|emb|CAE40222.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis] Length = 275 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 146/294 (49%), Gaps = 25/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + + IVHLGMSGS + E + K H HV + + +D Sbjct: 61 LLRFDHGVQ-IVHLGMSGSLRRVPEQEAPRK------HGHVDWVFDHAV------LRLHD 107 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 PRRFG E +P L LG EP D F+ +L F + +K ALL Sbjct: 108 PRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDA 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY E+L+RA + P R+ Q + +L I+ L DA+D+GGS+L Sbjct: 168 VVGVGNIYASESLFRAGIDP----RTAAQRVSAAR--CDRLAAAIRATLSDALDSGGSTL 221 Query: 237 RDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 222 RDYVGASGEPGAYFAIHAAVYERAGLPC-RVCGAPIRRLVQGQRATYFCPSCQK 274 >gi|113460292|ref|YP_718352.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 129PT] gi|123131889|sp|Q0I0X6|FPG_HAES1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|112822335|gb|ABI24424.1| DNA-(apurinic or apyrimidinic site) lyase [Haemophilus somnus 129PT] Length = 270 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 +I E II HLGMSGS I P NP +H+H I + N + YND Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRIV------PHDNPVNKHDHFDIVMNNGKLLR-----YND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V Sbjct: 108 ARRFG--AWLWTNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D Sbjct: 166 GVGNIYANEILFLCGLHPQKIAKTLTKKQAE------QLVFTIKQVLNEAIEQGGTTLKD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 220 FLQPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|45644628|gb|AAS73016.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC20E09] Length = 269 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + + +H +NLR+ KK+ +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINK-FENKRLLKVIIHNRNLRWKVDRIIEKKIDNKKVRSISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + +L I++HLGMSG+ I+ + K H+H K ++I+ND R Sbjct: 60 LIQFK-DLFIMLHLGMSGNLRIQKNNNNYFKK---HDHAEFVF------KDEKIIFNDVR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + Y + ++ LG EP + F+ YL N +K L++QK + G+ Sbjct: 110 RFGSIHLTKNP--YDHKLIKDLGIEPLSDQFDKDYLYRICSNSNLQIKKLLMDQKKIVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP R I N + KD L I+ VL +AI+ GG++L+D+ Sbjct: 168 GNIYASESLFLSNISPER-----ICNRLSVKD-CSNLSNSIKAVLNEAINMGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF+ +VYG+ G+PC S C +I + + RS+F C+ CQ Sbjct: 222 SADGNQGYFKIKLNVYGRDGQPCNS-CNNIITKKIIGQRSSFMCSECQ 268 >gi|262282702|ref|ZP_06060470.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] gi|262261993|gb|EEY80691.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] Length = 274 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVDKTIEQVQVRYAKMIGTGVDSFIHDLPGQAIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPSRPAASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I +GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLSGRGTHLCPHCQK 272 >gi|330813300|ref|YP_004357539.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486395|gb|AEA80800.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] Length = 286 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 155/296 (52%), Gaps = 20/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI ++ L +++ +TDI + +LR+ +F KKI ++RR+KYL Sbjct: 1 MPELPEVEITKKTLQKYVQDQYITDIKIKNYSLRYKINKNFRKNVVKKKIKKITRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII-------EHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + L I+HLGM+G ++ + + + +HNH+ KKY Sbjct: 61 IFHLSDKTFFIIHLGMTGRILVGKNNTLLDTSFYSSNSSINKHNHLYFFF------KKYV 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 +IYND RRFGF+ + L LG EP S N Y + ++KN L++ Sbjct: 115 MIYNDTRRFGFIKFYTEQELLRSSHLIHLGVEPLSKSLNFSYFKERIKGFKKSIKNTLMD 174 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + G+GNIYV EAL+ +K+SP R + + N K I + V GG Sbjct: 175 QSFICGLGNIYVNEALFISKISPGRMSFKIKDNEIILLIKSIKKILKKSIVF------GG 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+++D+ + +G G FQN F VYGK G+ C S+C +I+R V + R+TF+CT CQ Sbjct: 229 STIKDFHNSEGKSGQFQNFFKVYGKEGQGCPRSSCKGIIQRSVISSRATFFCTKCQ 284 >gi|326330625|ref|ZP_08196929.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951466|gb|EGD43502.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 289 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L V+ V LH + +R F+ +G+ + RR Sbjct: 1 MPELPEVEVVRAGLERHVLGARIVAVDVLHPRPVRRHLAGASAFADELKGRVLTGARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ P +P H+ + + + + + Sbjct: 61 KYLWLPLDSGDALMAHLGMSGQMLVQ------PPASPDERHLRVRIRLEGAAEGRELRFV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + + P+P + +F+A + + S +K LLNQ ++ Sbjct: 115 DQRMFGGLSISPGGAELP-PEIAHIAPDPLEAAFDAEAVVRWVRRSASGIKRILLNQTVI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R L PK + +L+ + V+ +A+ GG+S Sbjct: 174 SGVGNIYADEALWRAKLHGERPGERLT----APK--VRELLGHVHDVMTEALAQGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ + + YG+ GEPC CG +RRI RS+++C CQ Sbjct: 228 ALYVNVNGESGYFERSLAAYGREGEPC-DRCGAPMRRIAFMNRSSYFCPTCQ 278 >gi|50913780|ref|YP_059752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] gi|73919596|sp|Q5XDE4|FPG_STRP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50902854|gb|AAT86569.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] Length = 275 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLKALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAVLLSSKKTIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NTLGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|225181343|ref|ZP_03734787.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] gi|225167924|gb|EEG76731.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] Length = 274 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEVE IR L V+ + + D P TR GK++ RR K Sbjct: 1 MPELPEVETIRCGLEQVLPGRVFAAVEIGYGGSIKD-PAAADVMTRLPGKRVTGTGRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL I L+ + +++HL M+G + + +H HV S T+ + + ++D Sbjct: 60 YLQIFLDDDSVLVIHLRMTGQLVFNEGAAV----TDKHTHVVFSFTDGST-----LAFSD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + V S L TLGPEP F+ YL + K+ +K LLNQ+ +A Sbjct: 111 IRKFGTIWWVPISRLDHIKGLATLGPEPLSADFHFSYLNREVEKRTVTIKALLLNQQFLA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L RA++ P RK RSL + L I++VL +AI+ G+S+ D Sbjct: 171 GLGNIYADEILHRAQILPQRKARSLSRQE------RQHLFSAIREVLAEAIECRGTSMSD 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G++G FQN VYG+ + C C + I R AGR T YCT CQ Sbjct: 225 YRDSAGALGEFQNRLQVYGRRDQDC-PRCQKKISRSKVAGRGTHYCTSCQ 273 >gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 151/295 (51%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H R R + +A +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAV--------PRADHVRISALLDDGTV---LSFA 109 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLVE P+ L +P D F+A + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG+ Sbjct: 170 QVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGQGC-RRCGAVMRREKFMNRSSFYCPKCQ 277 >gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81700438|sp|Q73VL9|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10] Length = 283 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + +++VHLGMSG ++ P+ HV IS + T + + Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAV--------PRAEHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DL+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R ++ L ++ +V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIAATMTGRQ------LTAVLDAAAEVMRDALAQGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|227520125|ref|ZP_03950174.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] gi|227072415|gb|EEI10378.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] Length = 280 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ ++ + + + P F G+ + RR K Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRI-IESPEVDVFQGQLAGQTSEGIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L N +I HL M G + E I +H HV + T+ T + Y D Sbjct: 60 FLIFKLSDN-DMISHLRMEGKY--EFHQADDEIA--KHTHVMFTFTDGTQLR-----YLD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V Sbjct: 110 VRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL P ++ L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAQIHPEQPADSL-----KPVEVA-TLYQAIIDVLARAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ A +VYG+TG PC + CG I + A R T YC CQ+ Sbjct: 224 YLNALGEAGTFQVALNVYGQTGLPC-NRCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|15674603|ref|NP_268777.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71910221|ref|YP_281771.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] gi|21362547|sp|Q9A131|FPG_STRP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|13621714|gb|AAK33498.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71853003|gb|AAZ51026.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] Length = 275 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|255658137|ref|ZP_05403546.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] gi|260849444|gb|EEX69451.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] Length = 274 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEIIR+ L + T+ DI L R+ L++ P F + GK++ + RR K Sbjct: 1 MPELPEVEIIRQYLDEQLPGRTIACADILLTRQ-LKYPEPEAFQSLVAGKRMKGMRRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL++L+ +I+ HL M+GS + + P N + + + +++ D Sbjct: 60 YLLLDLQDGSTIVFHLRMTGSLVYD------PSGNQRDAYARMVFHLAGGGA---LVFAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG + + L++LGPEP +F YL + +K+ LL+Q+ +A Sbjct: 111 VRTFGCVYGFAAGEEIAVSGLQSLGPEPLSEAFTPAYLAQAIRGRKQPIKSFLLDQRRIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+ A + P R+ SL Q KL IQ VL D + GG++ R+ Sbjct: 171 GLGNIYADESLFLAGIHPRREAGSLTQAE------CKKLAAAIQHVLRDGLADGGTTFRN 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + +G G Q VY + G+PC CG+ I +I GR T +C YCQ Sbjct: 225 YRNGEGGYGRHQEHLCVYHRAGKPC-PTCGRPIEKITVGGRGTHFCPYCQ 273 >gi|188591113|ref|YP_001795713.1| formamidopyrimidine-DNA glycosylase [Cupriavidus taiwanensis LMG 19424] gi|238692929|sp|B2AGU2|FPG_CUPTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170938007|emb|CAP62991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase/ DNA lyase [Cupriavidus taiwanensis LMG 19424] Length = 290 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 105/305 (34%), Positives = 154/305 (50%), Gaps = 33/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ A + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPGLEACLAHRLVRRIERRGKYL 60 Query: 61 LIE-LEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNN------ 106 L+E + + + ++VHLGM+G+ + P P H+H + L Sbjct: 61 LLECISADAAQPPGWLLVHLGMTGTLRV------LPEAPPPGMHDHFDLLLDAGPAPGML 114 Query: 107 TNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 +T R + DPRRFG + L E L +P L TLG EP D +F+ +L + Sbjct: 115 ADTIVLR--FRDPRRFGAILWTTLPEAELA-SHPLLSTLGIEPFDPAFDGAWLHRHTRGR 171 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++ +K LL+ IV G+GNIY E+L+RA + P L + +L Q ++ Sbjct: 172 SAAIKTVLLSGAIVVGVGNIYASESLFRAGIRPTTAAGRLSRAR------CDRLAQAVRD 225 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L AI+ GGS+LRD+V DG+ GYFQ VY + G PC C +R+IVQ RSTFY Sbjct: 226 TLAQAIERGGSTLRDFVGSDGASGYFQLDCFVYDRAGLPC-RVCATPVRQIVQGQRSTFY 284 Query: 284 CTYCQ 288 C CQ Sbjct: 285 CPKCQ 289 >gi|19745616|ref|NP_606752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|56808814|ref|ZP_00366528.1| COG0266: Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M49 591] gi|94988038|ref|YP_596139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94991924|ref|YP_600023.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209558972|ref|YP_002285444.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] gi|24211705|sp|Q8P250|FPG_STRP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|19747744|gb|AAL97251.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|94541546|gb|ABF31595.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94545432|gb|ABF35479.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209540173|gb|ACI60749.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] Length = 275 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L K ++ D F+ G+ I V RR KY Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDL-ETFALTLPGQIIQSVGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI+L G L ++ HL M G +++ + + +H HV L N + ++Y D Sbjct: 60 LLIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG DL+ S + R LGPEP +F +K LL+Q +VAG Sbjct: 110 RKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 170 LGNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 224 RNALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|266618586|pdb|3GP1|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-V222p Complex Length = 273 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 151/291 (51%), Gaps = 21/291 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 PELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS+ R Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTPRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM 2228] Length = 276 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 157/293 (53%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPELPEVE + + L +++N VT++ + KN+ +P + F G KI V RR Sbjct: 1 MPELPEVETVVKGLGPLIRNKKVTEVEIREKNM-IAYPKNNIKAFKKDLLGAKIEKVKRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY++IEL ++++HL M+G +++ + +H HV SL + + + Sbjct: 60 GKYIIIELNNYKNLVIHLRMTGKLLVKEVKDFRD----KHTHVIFSLDDGQEIR-----F 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 N+ R+FG + L++ Q L TLGPEP ++ + F + + +K+ LLNQK Sbjct: 111 NNIRKFGRVYLIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLLLNQKF 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+RA + P R L + + K+ +Y ++EI L I GG+S Sbjct: 171 IAGIGNIYADEILFRAAILPDRTADQLSE---SEKEAIYYNMREI---LQKGIIYGGTSF 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYV+ G G FQ V+ + + C CG I++I +GRST++C CQK Sbjct: 225 SDYVNAFGEKGSFQEELRVHQREEKKCYQ-CGTKIKKIKISGRSTYFCPQCQK 276 >gi|170717422|ref|YP_001783367.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] gi|189044662|sp|B0UUX0|FPG_HAES2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168825551|gb|ACA30922.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] Length = 270 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 +I E II HLGMSGS I P NP +H+H I + N + YND Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRIV------PHDNPVNKHDHFDIVMNNGKLLR-----YND 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V Sbjct: 108 ARRFG--AWLWTNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVV 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D Sbjct: 166 GVGNIYANEILFLCGLHPQKIAKTLTKKQTE------QLVFTIKQVLNEAIEQGGTTLKD 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 220 FLQPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|116490733|ref|YP_810277.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290890153|ref|ZP_06553235.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] gi|116091458|gb|ABJ56612.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290480197|gb|EFD88839.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] Length = 274 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +N + D+ + L F G + + RR K+L Sbjct: 1 MPELPEVETVRRGLKKYFENEKIKDLKIIYPKLLDSDRTEFIEKVVGSTVSRIDRRGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ NL+I+ HL M G + +E A P K H + L N +V Y+D R Sbjct: 61 LFRLDNNLTIVSHLRMEGRYSVEAAQEA-PHK---HTEMIFELENGK-----QVFYDDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M LV++ + + + ++GPEP ++ Y ++ K +K LL+Q VAG Sbjct: 112 KFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKALLLDQNNVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW +++SP+R T + + L + I + L AI+ GGS++ + Sbjct: 172 IGNIYADEVLWLSEISPLRPTNEISEEEAD------NLRENIIRELAFAIENGGSTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ YG+ G+PC + G++I +I A R T YC CQK Sbjct: 226 IDASGHTGRMQDKLHAYGRAGQPCERDGGELI-KIRVAQRGTTYCPKCQK 274 >gi|262368041|pdb|3JR4|A Chain A, Mutm Interrogating An Extrahelical G gi|262368044|pdb|3JR5|A Chain A, Mutm Lesion Recognition Control Complex With N174c Crosslinking Site Length = 273 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 21/291 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 P+LPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G G IYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 GFGCIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|94993817|ref|YP_601915.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|139474273|ref|YP_001128989.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] gi|94547325|gb|ABF37371.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|134272520|emb|CAM30783.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] Length = 275 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L K ++ D F+ G+ I V RR KY Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDL-ETFALTLPGQIIQSVGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI+L G L ++ HL M G +++ + + +H HV L N + ++Y D Sbjct: 60 LLIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG DL+ S + R LGPEP +F +K LL+Q +VAG Sbjct: 110 RKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 170 LGNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 224 RNALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|71903062|ref|YP_279865.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] gi|90101320|sp|Q48UU6|FPG_STRPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71802157|gb|AAX71510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] Length = 275 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPGTASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|332358722|gb|EGJ36545.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK355] Length = 274 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLKRLVVGKTIGQVRIRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADSL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|306973332|ref|ZP_07485993.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|307081038|ref|ZP_07490208.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] gi|308214424|gb|EFO73823.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|308357235|gb|EFP46086.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|308361244|gb|EFP50095.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] Length = 289 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 151/302 (50%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+T++ +H R R D P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHMTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|21730465|pdb|1KFV|A Chain A, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna. gi|21730466|pdb|1KFV|B Chain B, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna Length = 271 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 142/287 (49%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRXVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL G + + + +H+H+T + ++IY D R+F Sbjct: 62 EIGDDFRLISHLRXEGKYRLATLDAPRE----KHDHLTXKFADG------QLIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y + Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTYSAL 225 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 226 -GSTGKXQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|309800253|ref|ZP_07694429.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] gi|308116106|gb|EFO53606.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] Length = 274 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ K + DI + K ++ D F G+++ + RR K Sbjct: 1 MPELPEVETVRRGLEKLILGKKIASLDI-RYPKMIKTDL-DQFQKELHGQELQSMGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L + +I HL M G ++ + +H HV I + ++Y D Sbjct: 59 YLLFYLTDKV-LISHLRMEGKYLY----YPDQVPERKHAHVLIHFEDGGT-----LVYED 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VA Sbjct: 109 VRKFGTMELLAPELLEAYFLSKKLGPEPTEQDFDLEIFRGALKKSKKPIKSHLLDQTLVA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LWRAK+ P R + SL KL + +VL A++ GGS++R Sbjct: 169 GLGNIYVDEVLWRAKVHPARTSNSLSAQEAR------KLHDQTIEVLGQAVEKGGSTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 223 YTNAFGEDGTMQDFHQVYDKAGQAC-SRCGSIIEKIQLGGRGTHFCPKCQR 272 >gi|293607619|ref|ZP_06689953.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] gi|292814052|gb|EFF73199.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] Length = 275 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 147/297 (49%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLKRLVIHEARMRWPIPTDLPALIGGRDVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + IVHLGMSGS S A +H+HV N + +DPR Sbjct: 61 LLRFEHG-TQIVHLGMSGSL----RSVAPGEFLRKHDHVEWIFENAV------LRLHDPR 109 Query: 121 RFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG +P L LG EP D F+ +L F + +K LL V Sbjct: 110 RFGAVLWHADADGPIDAHPLLAKLGIEPFDPRFDGAWLHRHFKNHGAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-----KLIQEIQKVLIDAIDAGG 233 G+GNIY E+L+RA+++P TP + L +L ++ L DA+ +GG Sbjct: 170 GVGNIYASESLFRARINP-----------KTPANKLSLARCERLADMVRATLADALTSGG 218 Query: 234 SSLRDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRDYV G G YF +VY + G+PC C IRR VQ R+T+YC CQ+ Sbjct: 219 STLRDYVGATGEPGAYFDIHAAVYEREGKPC-RVCETPIRRFVQGQRATYYCPKCQR 274 >gi|332367335|gb|EGJ45070.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1059] Length = 274 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDGFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|266618598|pdb|3GPY|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 3 (Lrc3) gi|266618604|pdb|3GQ4|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 5 (Lrc5) Length = 273 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 21/291 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 P+LPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 224 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|94265145|ref|ZP_01288909.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|94267032|ref|ZP_01290675.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452266|gb|EAT02912.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93454384|gb|EAT04685.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 343 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 160/336 (47%), Gaps = 61/336 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR----GKKIIDVSRR 56 MPELPEVE++RR L ++ + +I +LR P AA R G I V RR Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDNIETSGLSLRRPVPL---AALRELAVGAVITGVERR 78 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS-------------- 102 AKYLL+ L+ +++HLGM+G T+ +P + +H+H+ I Sbjct: 79 AKYLLLHLDNGALLVIHLGMTGKLYPAATT--EPPR--KHDHLVIKMGTDLFFTSATPET 134 Query: 103 ----LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLT 157 L N + + V +ND RRFG + + + P L LGPEP D F A YL Sbjct: 135 TPGMLVKNKSVPIFEVRFNDCRRFGLVAVYGSEEAVAPPLLVGLGPEPLDKRQFTAAYLH 194 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 ++ + +KN L++ ++V GIGNIY E L+ A +SP L + +L Sbjct: 195 RCCRQRRTPIKNLLMDNRVVVGIGNIYANEILFAAGISPFAPAARLGRLRAG------RL 248 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG--------- 268 + +++L AI AGG+++ D+ + G GYFQ +VYG+ G PC C Sbjct: 249 VAAARQILTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPDDGADQPP 307 Query: 269 ---------------QMIRRIVQAGRSTFYCTYCQK 289 MI R +QAGR+TF+C CQK Sbjct: 308 AAGATAAKKVAKGAAPMIERRMQAGRATFFCPRCQK 343 >gi|299768861|ref|YP_003730887.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] gi|298698949|gb|ADI89514.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] Length = 274 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDIQKLI-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSADFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCI-NCETTLENLKLGQRASVFCPQCQ 266 >gi|121534306|ref|ZP_01666130.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] gi|121307076|gb|EAX47994.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] Length = 274 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE+PEVE IRR L +V + + I L R +++ F A G+KI + RR K Sbjct: 1 MPEMPEVETIRRTLADKVVGRRIEAVKIDLPRL-VKWPSVSEFKEAVTGRKIERLDRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL LE +L ++VHL M+G ++ + H+ L NN +IY D Sbjct: 60 YLLFRLEHDLVMVVHLRMTGRLYY----VPAGYQHDKFTHIVFDLDNNDA-----LIYAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G + + + + L T+GPEP F Y K+ S++K LLNQ+++ Sbjct: 111 SRTLGTLYAIHLADLGRIAGLATMGPEPLSPEFTFDYFRMMLKKRQSSIKAVLLNQQLIG 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L A ++P R SL +D KL + I +V+ + I GG+S RD Sbjct: 171 GLGNIYVDESLAVAGIAPTRPAASL------SEDETQKLYRAINQVIEEGIAHGGTSFRD 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G Q+ VYG+ G+PC CG I R AGR T +C CQ+ Sbjct: 225 YRDGVGQTGSHQHYLRVYGRKGQPC-QRCGMPIVRTEVAGRGTHFCPICQR 274 >gi|94989918|ref|YP_598018.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] gi|94543426|gb|ABF33474.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] Length = 275 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + + L K ++ D F+ G+ I V RR KY Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDL-ETFALTLPGQIIQSVGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI+L G L ++ HL M G +++ + + +H HV L N + ++Y D Sbjct: 60 LLIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG DL+ S + R LGPEP +F +K LL+Q +VAG Sbjct: 110 RKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 170 LGNIYVDEVLWVAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 224 RNALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|257898349|ref|ZP_05678002.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] gi|257836261|gb|EEV61335.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] Length = 278 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPLFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK+I +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----CPKEI-EQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|296117606|ref|ZP_06836190.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295969337|gb|EFG82578.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 270 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 152/297 (51%), Gaps = 35/297 (11%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE++RR L +V +I R N D P A + + V+RR K Sbjct: 1 MPELPEVEVVRRGLEPHIVDHAFKSVEILHPRANRGQDEP--LGALLHNRVVSAVARRGK 58 Query: 59 YLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL EL+G+ + +HLGMSG I HT + +H + LT+ + Sbjct: 59 YLWCELDGHTEREDDVLFMHLGMSGQLRIGHT-------DSKHVRIRAHLTDGVDLS--- 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG+ LV K + +G +P F+ + + K +++K ALL+ Sbjct: 109 --FIDQRTFGYW-LVAPKAKIDH-----IGHDPLSPDFDIVAAARKLRTKKTHVKTALLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q I +GIGNIY EALWRA +SP+RK L+Q + + ++V+++A+ GG Sbjct: 161 QTIASGIGNIYADEALWRAHVSPLRKANRLLQREAV------AIYEAAKEVMLEALAQGG 214 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +S YV+++G GYF + VYG+T EPC CG I R+V RS+ +C CQ+ Sbjct: 215 TSFDALYVNVNGESGYFARSLHVYGRTDEPC-DTCGGPISRVVLNARSSHFCPLCQR 270 >gi|289667980|ref|ZP_06489055.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 227 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 91/245 (37%), Positives = 139/245 (56%), Gaps = 22/245 (8%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTN 105 G I +V RRAKYLLI+ + S ++HLGMSGS ++ + + H+HV ISL N Sbjct: 3 GAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPR-----SHDHVDISLQN 57 Query: 106 NTNTKKYRVI-YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 RV+ +NDPRRFG L+ S + L LGPEP ++F YL + + Sbjct: 58 G------RVLRFNDPRRFGC--LLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRR 109 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +K L++Q +V G+GNIY E+L RA +SP+R+ + D +L ++ + Sbjct: 110 AAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKV------SLDRYRRLADAVKDI 163 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L AI GG++LRD++ DG+ GYF+ +VYG+ GEPC CG++++ R+T +C Sbjct: 164 LAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWC 222 Query: 285 TYCQK 289 CQ+ Sbjct: 223 GSCQR 227 >gi|257884460|ref|ZP_05664113.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257887243|ref|ZP_05666896.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|293377606|ref|ZP_06623795.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] gi|293571801|ref|ZP_06682817.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|257820298|gb|EEV47446.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257823297|gb|EEV50229.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|291608055|gb|EFF37361.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|292643606|gb|EFF61727.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] Length = 278 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK+I +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEI-EQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|227551618|ref|ZP_03981667.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257895779|ref|ZP_05675432.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] gi|227179295|gb|EEI60267.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257832344|gb|EEV58765.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] Length = 278 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFVAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK+I +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEI-EQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|160900861|ref|YP_001566443.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] gi|160366445|gb|ABX38058.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] Length = 276 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 103/295 (34%), Positives = 155/295 (52%), Gaps = 27/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ RR + + + L K LR+ P + G+ + V RR Sbjct: 1 MPELPEVEVTRRAFAAQIAGARIESVALG-KPLRWPLGIAPELLA----GRDVHGVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGS--FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYLL+EL L +++HLGMSGS F+ H + P H+H + T K + Sbjct: 56 KYLLMELSEGL-LMLHLGMSGSLRFVAPHEAPLGPAGT--HDHFDL------QTSKGLLR 106 Query: 116 YNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +DPRRFG M + S + L LG EP D+SF+ + +K LLN Sbjct: 107 LHDPRRFGAVMYVAAESDPWARRLLDHLGMEPLDDSFSFETFRAGLKASRTPIKQLLLNG 166 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V G+GNIY E L+ A+++P + + P+ + +L +EI++VL A++ GG+ Sbjct: 167 SVVVGVGNIYASEVLFMARIAPTQPACEV-----GPRKV-RRLFEEIRRVLALAVEQGGT 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +LRD+ DG G+FQ VYG+ G PC ++CG ++ + Q RST++C CQK Sbjct: 221 TLRDFSAPDGMAGHFQLQAKVYGREGLPC-THCGSPVQMLRQGQRSTYFCARCQK 274 >gi|325696174|gb|EGD38065.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK160] Length = 274 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLF----YPDEVPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLEAYFAARKLGPEPTDSDFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPNCQK 272 >gi|302342357|ref|YP_003806886.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] gi|301638970|gb|ADK84292.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] Length = 272 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + ++ F+ GK I +R K L Sbjct: 1 MPELPEVECVRRTLEPAVLGRAIVAVQINYAKAVLPDARAFADGLGGKSITATARHGKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ + +HL M+G I+ A H H I L + + + Y D R Sbjct: 61 ILGLDQGAFMTIHLRMTGQVIV-----ADQAPQADHIHARIDLDDGQS-----LFYRDMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ + Q PL +GP+ + A + LKN LL+Q+++AG+ Sbjct: 111 KFGRLNYCPDAQALQNGPLANMGPDALE--LEAEAFATLVGARGGKLKNVLLDQRVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA LSP+ R+L D L +L + +++ L++A++ GGSS+R+++ Sbjct: 169 GNIYADESLHRAGLSPLADPRAL------SADDLDRLHRALRQTLLEALEQGGSSVRNFM 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ++ VY +TG+PC CGQ + RIV AGR T +C CQ+ Sbjct: 223 DAHGRAGTFQHSHRVYRRTGQPC-PVCGQPVERIVVAGRGTHFCPACQE 270 >gi|240169619|ref|ZP_04748278.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 283 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 151/296 (51%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V K MT + R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLAAHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + +++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWLTLNSPDSALVVHLGMSGQMLLGVV--------PRSDHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV P+ L +P D F+A + K+S LK LLN Sbjct: 110 ADQRTFGGWLLADLVTVDGSVVPAPVAHLARDPLDPRFDARAVVEVLRGKHSELKRQLLN 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK++ R +L + L ++ +V+ +A+ GG Sbjct: 170 QEVVSGIGNIYADEALWRAKVNGARVAATLTRRQ------LGAVLDAAAEVMREALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ G+ C CG +IRR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGRDGQNC-RRCGAVIRREKFMNRSSFYCPRCQ 278 >gi|258652106|ref|YP_003201262.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] gi|258555331|gb|ACV78273.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] Length = 285 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 143/293 (48%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L+ + + + +H P F A G+ + DV RR Sbjct: 1 MPELPEVETVRRGLLTHLAGRRIRTVRVHHDRAVRRHPGGPDDFQAVLAGRLVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++ HLGMSG F + A PI P H H+ I + + + + Sbjct: 61 KYLWWALDDGDAVLAHLGMSGQFRV--AGPAGPIPEPLHPHLRIRF--DFDDAGPSLDFL 116 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M + + + +P D F+A K + +K ALL+Q +V Sbjct: 117 DQRTFGGMTYAPGGAELPAA-IAHIARDPLDPEFSAAGAVAALRHKRTGIKRALLDQTVV 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R T L + ++ +V+ DA+ GG+S Sbjct: 176 SGVGNIYADEALWRARMHFDRPTERLTRPQAA------TVLAAATEVMTDALAVGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + +VYG+ PC CG IRR RS+++C CQ+ Sbjct: 230 ALYVNVNGESGYFDRSLNVYGRADRPC-PRCGTPIRRSAFMNRSSYWCPRCQR 281 >gi|256831105|ref|YP_003159833.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] gi|256580281|gb|ACU91417.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 160/292 (54%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L +++ + ++ LH LR P G+ I VSRRAK Sbjct: 1 MPELPEVETIARGLHTLVQGRRIREV-LHFTPSVLRAGNPGSLP----GRTITYVSRRAK 55 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTNNTNTKKYRVIYN 117 LL+ L+ + HL M+G + A P ++ P+H H+ L + R+I+ Sbjct: 56 LLLVHLDQGECLAFHLKMTGRVWV-----ASPGQDLPKHTHLVCELEG-----RDRLIFE 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D RRFGF + + + LGPEP ++ + L + + + +K+ LLNQ ++ Sbjct: 106 DTRRFGFFGIYGPQDIEAWSFYQNLGPEPLQSTAEDLAL--RLGARRAGVKSLLLNQTVL 163 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E+L+ A++ P SL N K + +L E+Q++L++AI AGGS++ Sbjct: 164 AGIGNIYADESLFAARIHPA----SLAANIPLAKRV--QLCSELQRILLEAIAAGGSTIS 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY + G G FQ++F VYGK G+PC + CG+ ++ AGR++ +C CQK Sbjct: 218 DYRNAYGKSGIFQDSFEVYGKKGQPCPA-CGRALKAEQIAGRTSTHCPRCQK 268 >gi|293556213|ref|ZP_06674803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] gi|291601632|gb|EFF31894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] Length = 278 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLKRLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK++ +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEV-EQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG +I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTLIVKTKVAQRGTHYCPNCQR 273 >gi|104779568|ref|YP_606066.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] gi|166198732|sp|Q1IGF3|FPG_PSEE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|95108555|emb|CAK13249.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] Length = 270 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G+ I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLVGQRVSRVVVRDRRLRWPIPEDLDVRLSGQCIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELG----LPAAKHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPLNHEL--LIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVFCPKCQR 270 >gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 286 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 153/299 (51%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H R R + P +A +I RR Sbjct: 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60 Query: 58 KYLLIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + L+G + +++VHLGMSG ++ P+ +HV IS + T Sbjct: 61 KYLWLVLDGPGQPDTALVVHLGMSGQMLLGEV--------PRADHVRISALLDDGTV--- 109 Query: 114 VIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG DLVE P+ L +P D F+ + +K+S +K Sbjct: 110 LSFADQRTFGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHSEIKRQ 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALWRAK++ R +L + L ++ +V+ DA+ Sbjct: 170 LLDQTVVSGIGNIYADEALWRAKVNGARIAATLSRRR------LGAVLDAAAEVMRDALS 223 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 QGGTSFDSLYVNVNGQSGYFDRSLDAYGREGQNC-RRCGAVMRREKFMNRSSFYCPKCQ 281 >gi|325687307|gb|EGD29329.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK72] Length = 274 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 145/292 (49%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L L G + ++ HL M G ++ E C +H HV T+ ++Y Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLFYPDEVPEC-------KHAHVFFETTDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ Y R LGPEP + F + +K LL Q +V Sbjct: 108 DVRKFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EALWRA++ P+R SL P ++ +L ++I +VL I+ GS++R Sbjct: 168 VGLGNIYVDEALWRARIHPVRPAASL-----KPAEV-RRLREQIIEVLQLGIEKRGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 222 TYRNALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|170016692|ref|YP_001727611.1| formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] gi|169803549|gb|ACA82167.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] Length = 280 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + + F + RR KYL Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E A P K H + L++N V YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPRE-ATPHK---HTEIIFELSDNRA-----VFYNDTR 111 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T K P L LGPEP + + Y+ F K +K+ LL+Q +AG Sbjct: 112 RFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTAFAKSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T SL + +L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTNSL------SRTVLAVLRQNIIDEMARAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG ++ +I R T +C +CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTIMSKIKVGQRGTTFCPFCQ 273 >gi|169632504|ref|YP_001706240.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii SDF] gi|229464467|sp|B0VRV3|FPG_ACIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169151296|emb|CAO99994.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii] Length = 274 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ E C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAREMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|256847514|ref|ZP_05552960.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] gi|256716178|gb|EEU31153.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L + + I ++ + F A G+ I V RR KYL Sbjct: 1 MPEMPEVETVRRGLNEIADGQQIIGIDVNYGKTIENDVEGFREALVGQTIEHVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M GS+ + T P+ +H HV N T+ + Y D R Sbjct: 61 LFRFSNHLTMISHLRMEGSYFKQKTGM--PVD--KHTHVIFHFKNGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Y LRT+GPEP + F Y HK +K LLNQ VAG+ Sbjct: 112 KFGRMRLVTTGEEMNYGGLRTIGPEPTEQDFKLDYFERILHKSRGKIKPFLLNQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L K + +I+EI A + G+++ Y Sbjct: 172 GNIYCDEVLWMSKINPEQAANTLTHEQA--KTLRENIIKEI----ATATEHKGTTVHTYK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ+ Y GE C CG + +I A R T YC +CQ+ Sbjct: 226 NAFGDAGGFQDYLKAYDHGGEKC-PRCGTKMVKIKVAQRGTTYCPHCQE 273 >gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS] gi|166215636|sp|A3PXU1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. JLS] Length = 296 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 157/306 (51%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIELEG-----------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L+G +++++VHLGMSG ++ PI P+ +H+ I+ + Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLL------GPI--PKEDHLRIAALLD 112 Query: 107 TNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + K Sbjct: 113 DGTA---LSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY EALWRAK++ R SL + PK L +++ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTK----PK--LAEILDHAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMRDALGQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|313884925|ref|ZP_07818677.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] gi|312619616|gb|EFR31053.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] Length = 282 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 152/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR L + +T+ + ++ + D +S +G+ I + RRA Sbjct: 1 MPELPEVETNRRGLAQCVTGLTIDQVDIYWPRIVKTEMDL-LKWSQELQGRTIERMDRRA 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL+ L L+++ HL M G + +K +H H+ ++ T+ + + Y Sbjct: 60 KYLIFVLSQGLALVSHLRMEGKYFYYPVDQIPEVKG-KHVHLIMTFTDGSQLQ-----YQ 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG +L+ + Y + +GPEP SF K + +K ALL+QK+V Sbjct: 114 DVRKFGRFELMPQTELADYFKAKKIGPEPTPESFKLDGFYASLGKISRAIKPALLDQKLV 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL++A++ P+ + L + + +L I VL A++AGG+++R Sbjct: 174 AGLGNIYVDEALFQAQIHPLTPAKDLSYDQAS------RLHAAIIDVLARAVEAGGTTIR 227 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G G FQ +VYG+T +PC CG I ++V R T YC CQ Sbjct: 228 TYLNSLGEAGSFQVQLAVYGQTDQPC-PRCGHPIEKMVVGQRGTHYCPICQ 277 >gi|308068369|ref|YP_003869974.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305857648|gb|ADM69436.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa E681] Length = 276 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++V K++ + L R R D F+ +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIQAFAMELADHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+G L ++ HL M G + + S P++ +H HV + T + Y D Sbjct: 61 FLRILLDG-LVLVSHLRMEGRYGL--YSQHDPVE--KHTHVIFHFKDGTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV E+L++A + P + +SL + + L + I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSLTDSQ------FHVLHEAIVSTLGASIQVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 225 FVNGQGKTGDFQHQLQIYGRNAKPCI-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|328946707|gb|EGG40845.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1087] Length = 274 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDVFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLFYLDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|307821985|ref|ZP_07652217.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] gi|307736551|gb|EFO07396.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] Length = 271 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 145/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + + LR+ P S G I VSRRAKYL Sbjct: 1 MPELPEVETTCRGIAPHIEGQIIKQVIIRQPKLRWPVPETLSQTLTGLSIQSVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++++HLGMSGS I T +H+H+ + T + +NDPR Sbjct: 61 LFSTTSG-TVLLHLGMSGSLRIMSTDQTVG----KHDHIDFIFNDGTILR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T ++ L+ LGPEP FN L + +K+ +++ IV G+ Sbjct: 111 RFGAV-LWTTEPAAEHQLLKNLGPEPLLPDFNGELLYSLSRNRTIAVKSFIMDSHIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R Q KL + I+ VL AI GG++LRD+V Sbjct: 170 GNIYANEALFMAGIQPTR------QAGKVSLARYQKLAECIRVVLQQAIQQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ VYG+ G PC+ C Q + I A RST +C CQ+ Sbjct: 224 NEVGKPGYFQQQLKVYGRAGLPCV-GCNQPLTEIRIANRSTVFCPNCQR 271 >gi|148265694|ref|YP_001232400.1| formamidopyrimidine-DNA glycosylase [Geobacter uraniireducens Rf4] gi|189044594|sp|A5G7Q9|FPG_GEOUR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146399194|gb|ABQ27827.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens Rf4] Length = 271 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 147/293 (50%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR + G+ I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLPLQPDLDSILSGRIISAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I+HLGM+G+ + +H+H+ + L + + DPR Sbjct: 61 LVRFTAG-TLILHLGMTGNLRLVQAD----TPPGRHDHLDLVLNSGLCLR-----LTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLR-TL----GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RF T + PLR TL GPEP F+ YL + + +K +++ + Sbjct: 111 RF------STIVWTHDDPLRHTLLAKHGPEPLTGDFSGDYLYTKSRGRRITVKQFIMDSR 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GNIY CEAL+RA + P +L + +L I++VL DAI +GGS+ Sbjct: 165 VLAGVGNIYACEALFRAGIHPETPAGALSTTH------CLRLADTIKEVLTDAIASGGST 218 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L D++ +G GYF +FSVYG+ PC CG IRR Q GRST++C CQ Sbjct: 219 LGDFLVSEGKPGYFPMSFSVYGRNDAPC-PGCGAPIRRSRQGGRSTYFCDRCQ 270 >gi|225868141|ref|YP_002744089.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] gi|225701417|emb|CAW98513.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] Length = 281 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V K + + + K ++ D HF G+++ V RR K Sbjct: 10 MPELPEVETVRRGLERLVVGKQIAAVTVKVP-KMVKTDL-EHFVMTIPGQQVQGVDRRGK 67 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL + G L +I HL M G +++ A + + +H HV +++T+ + ++Y D Sbjct: 68 YLLFDF-GQLVMISHLRMEGKYLL----FADTVPDHKHFHVFLTMTDGST-----LVYQD 117 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG +L+ S + R LGPEP +F ++K LL+Q +VA Sbjct: 118 VRKFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVA 177 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW AK+ P R++ SL K + ++ E ++L I+ GGS++R Sbjct: 178 GLGNIYVDEVLWAAKVHPERRSASL------KKAEIKRIHDETIRILQLGIEKGGSTVRT 231 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 232 YQNTLGMNGSMQHYLMVYGQTGKPC-QRCGAAIVKLKVGGRGTHVCPRCQR 281 >gi|293611034|ref|ZP_06693333.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826686|gb|EFF85052.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 274 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + ++ HLGMSGSF + T ++ +H+H+ I + ++ Y+DPR Sbjct: 59 LAKFEQD-QMLWHLGMSGSFRL--TEPNDELR--KHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNPETQGKL--IDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|325123355|gb|ADY82878.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQKLV-GQRLTGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + T ++ +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL--TEPNDELR--KHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + + Q + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGC--ILWLNRETQGKLIDTLGPEPLSDDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMRQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|324993806|gb|EGC25725.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK405] gi|324994875|gb|EGC26788.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK678] Length = 274 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y +R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAVRKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|325570070|ref|ZP_08145995.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] gi|325156898|gb|EGC69069.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] Length = 280 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ N T+ +I R + P FSA +G++ RR K Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPI-FSALLKGQRFEKFERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L + +I HL M G + + PI + +H HV T+ + Y+D Sbjct: 60 FLIFKLT-DYDLISHLRMEGKYKYFESD---PIVD-KHTHVIFHFTDGSQLN-----YHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+ Y + LGPEP F + +K LL+QK+V Sbjct: 110 VRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+AK+ P + SL+ T D+L++ I + VL +++AGG+++R Sbjct: 170 GLGNIYVDEALWQAKIHPEQPADSLMP---TEVDVLHEAIID---VLERSVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ + +VYG+TG PC CG I +I A R T +C CQK Sbjct: 224 YLNALGEAGKFQMSLNVYGQTGNPC-GRCGTPIVKIKVAQRGTHFCPQCQK 273 >gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289553286|ref|ZP_06442496.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] gi|297635544|ref|ZP_06953324.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732543|ref|ZP_06961661.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659875|ref|ZP_07816755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319490|gb|ACT24093.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289437918|gb|EFD20411.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] Length = 289 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 151/302 (50%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H R R D P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|302537166|ref|ZP_07289508.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446061|gb|EFL17877.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 289 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + LH + +R F+A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVAAVEVLHPRAVRRHLAGGPDFAARLAGQTIGVPRRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTKKYRV 114 KYL + LEG +LS++ HLGMSG +++ P P H+ I L ++T T+ + Sbjct: 61 KYLWLPLEGRDLSVLGHLGMSGQLLVQ------PADAPDEKHLRIRLRFADDTGTE---L 111 Query: 115 IYNDPRRFGFMDLVET---SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG + L ET S + + + +P D F+ K + +K AL Sbjct: 112 RFVDQRTFGGLSLHETVPGSAEGLPDVIAHIARDPLDPLFDEGAYHLALRAKRTTVKRAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ Sbjct: 172 LDQSLISGVGNIYADEALWRARLHYERPTATLTRPRSA------ELLTHVREVMNAALAV 225 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 226 GGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 283 >gi|71279847|ref|YP_266979.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] gi|90101300|sp|Q48AD4|FPG_COLP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71145587|gb|AAZ26060.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] Length = 271 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V+++ + K LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVEVCRLGISPHVIAQEVSEVIIRNKRLRWPIPDEVCSAV-GLPVLKVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ ++++HLGMSG+ +IE + P+ +H+H + + + + NDP Sbjct: 60 LLRFSTG-TLLLHLGMSGTIRVIEQDT---PVA--KHDHFDLVFKHGKSLR-----LNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L + + + L LGPEP + F YL + + +K L+N +V G Sbjct: 109 RRFGAV-LWLANDEDELGLLAKLGPEPLSDDFAEGYLFSKAKNRKVPIKTFLMNNHVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL++A + P K + + ++ + L I+KVL AI GG++L+D+ Sbjct: 168 VGNIYANEALFQAGILPTAKAKDIDEHR------MNSLTAIIKKVLSAAIAQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + VYG+ GE C++ C ++ I Q+ RS+ +C CQ+ Sbjct: 222 TQADGRPGYFAQSLMVYGRAGEACVT-CKTKLQEIRQSNRSSVFCPSCQQ 270 >gi|15610061|ref|NP_217440.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15842470|ref|NP_337507.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31794101|ref|NP_856594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638806|ref|YP_979030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662769|ref|YP_001284292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148824114|ref|YP_001288868.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969553|ref|ZP_02551830.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404900|ref|ZP_03417081.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412767|ref|ZP_03421479.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215428369|ref|ZP_03426288.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431872|ref|ZP_03429791.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215447188|ref|ZP_03433940.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754677|ref|ZP_03533473.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558948|ref|ZP_03538024.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|224991298|ref|YP_002645987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254233015|ref|ZP_04926342.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|254551998|ref|ZP_05142445.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187944|ref|ZP_05765418.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260202060|ref|ZP_05769551.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260206244|ref|ZP_05773735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289444480|ref|ZP_06434224.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448590|ref|ZP_06438334.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289571112|ref|ZP_06451339.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289575630|ref|ZP_06455857.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289746724|ref|ZP_06506102.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289751593|ref|ZP_06510971.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289755038|ref|ZP_06514416.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289759047|ref|ZP_06518425.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289763101|ref|ZP_06522479.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|298526394|ref|ZP_07013803.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|306781123|ref|ZP_07419460.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|306785761|ref|ZP_07424083.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|306789801|ref|ZP_07428123.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|306794614|ref|ZP_07432916.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|306798858|ref|ZP_07437160.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|306804703|ref|ZP_07441371.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|306808896|ref|ZP_07445564.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|306968995|ref|ZP_07481656.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|307085636|ref|ZP_07494749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|54037118|sp|P64151|FPG_MYCBO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040772|sp|P64150|FPG_MYCTU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215634|sp|A1KMR9|FPG_MYCBP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215638|sp|A5U6T0|FPG_MYCTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789445|sp|C1AG40|FPG_MYCBT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3261604|emb|CAA98987.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|13882775|gb|AAK47321.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619696|emb|CAD96636.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121494454|emb|CAL72935.1| Probable formamidopyrimidine-dna glycosylase fpg [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124602074|gb|EAY61084.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|148506921|gb|ABQ74730.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium tuberculosis H37Ra] gi|148722641|gb|ABR07266.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis F11] gi|224774413|dbj|BAH27219.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289417399|gb|EFD14639.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421548|gb|EFD18749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289540061|gb|EFD44639.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289544866|gb|EFD48514.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289687252|gb|EFD54740.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289692180|gb|EFD59609.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289695625|gb|EFD63054.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289710607|gb|EFD74623.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|289714611|gb|EFD78623.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298496188|gb|EFI31482.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|308326063|gb|EFP14914.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|308329541|gb|EFP18392.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|308333734|gb|EFP22585.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|308337091|gb|EFP25942.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|308340903|gb|EFP29754.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|308344740|gb|EFP33591.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|308348720|gb|EFP37571.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|308353416|gb|EFP42267.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|308364863|gb|EFP53714.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|323718536|gb|EGB27707.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CDC1551A] gi|326904539|gb|EGE51472.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis W-148] Length = 289 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 151/302 (50%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H R R D P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + TS + +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTSA----EVDKHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL D + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTD------DQIKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|213964684|ref|ZP_03392884.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] gi|213952877|gb|EEB64259.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] Length = 287 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 152/296 (51%), Gaps = 16/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + D ++ P F TRG+ ++ RR Sbjct: 1 MPELPEVESVRRGLDTYVVGGRIDDSFVYNARAVRRQPGGAAEFIGRTRGRTVVASDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K++ + L+ + +I +HLGMSG +E + +H + + ++ + +N Sbjct: 61 KFMWLTLDDDSAIAIHLGMSGQLRVEAPYTPNTLSG-RHTRAAFDIAL-PDGARHLINFN 118 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG++ +LVE+ ++ P + P+ + + + + L H+ K S +K LLNQ Sbjct: 119 DQRTFGWVWACELVESHGRFVPEPAAKIAPDLLEPTVDVVALAHRMMKSRSPIKAVLLNQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 IV+GIGNIY E LW AK+ L L KL++E Q VL A+ AGG+ Sbjct: 179 NIVSGIGNIYADEMLWAAKVDGRVPACDLSVRR------LAKLLREGQSVLERALAAGGT 232 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YVH++G GYF+ + + YG+ GEPC CG+ I R+ RS++ C CQ+ Sbjct: 233 SFDALYVHVNGESGYFERSLNAYGQEGEPC-PRCGRAIVRLPFGNRSSYLCPTCQR 287 >gi|260548865|ref|ZP_05823087.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] gi|260408033|gb|EEX01504.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] Length = 274 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDIQRLV-GQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQD-QMLWHLGMSGSFRL----CQPNDEFRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGC--ILWLNPETQGKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ Y + GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYSRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|157150267|ref|YP_001450016.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] gi|157075061|gb|ABV09744.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] Length = 274 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-MVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL+Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFVAALSRSKKPIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWR ++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRVRIHPARPAASL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGNPIEKIKLGGRGTHLCPHCQK 272 >gi|320547275|ref|ZP_08041567.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] gi|320448079|gb|EFW88830.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] Length = 273 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 146/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F G+ + R K Sbjct: 1 MPELPEVETVRRGLERLIVGRKIVSIDVRVP-KMIKTDLTA-FETDIIGQTFQSIGRCGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L+ + II HL M G +++ + +H H L N + ++Y D Sbjct: 59 YLLLNLDRQV-IISHLRMEGKYLLFEDE----VPENKHFHTFFKLDNGST-----LVYQD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL+E Y R LGPEP + +F+ Q +K LL+Q +V Sbjct: 109 VRKFGTMDLLEKEQVADYFRQRKLGPEPTETAFDLATFAKQLKASKKVIKPYLLDQTLVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AK+ P R + SL + + L I ++L I GGS++R Sbjct: 169 GLGNIYVDEALWAAKIHPKRTSDSLSDSE------ISLLRDSIIRILQLGIAKGGSTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VYGKTGEPC C I +I GR T +C CQK Sbjct: 223 YQNALGENGSMQDFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|225870911|ref|YP_002746858.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] gi|225700315|emb|CAW94602.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] Length = 297 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTIPGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ P P+H H + LT + ++Y D R Sbjct: 85 LFDF-GQLVMISHLRMEGKYLLF------PDTVPEHKHFHVFLTMTDGST---LVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + R LGPEP +F +K LL+Q +VAG+ Sbjct: 135 KFGTFDLLPKAELAAFFQKRQLGPEPTKQTFQLKTFEAALLASKKTIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P R++ SL K + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAARVHPERRSASL------KKAEIKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQK Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPC-QRCGTSIVKLKVGGRGTHVCPRCQK 296 >gi|226199567|ref|ZP_03795124.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] gi|254296087|ref|ZP_04963544.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|157806100|gb|EDO83270.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|225928448|gb|EEH24478.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] Length = 273 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 149/288 (51%), Gaps = 17/288 (5%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + P +H+HV ++ + + DPRRFG Sbjct: 61 VDAGW-FIVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIF------DEFVLRFRDPRRFG 112 Query: 124 --FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 + + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 113 AVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVVGVG 172 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E+L+RA + P + P+ +L ++ L DAI+ GGS+LRD+V Sbjct: 173 NIYASESLFRAGIRPT----TAAGRVSLPR--YERLADAVRATLADAIERGGSTLRDFVG 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 SNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 273 >gi|290477292|ref|YP_003470213.1| formamidopyrimidine DNA glycosylase [Xenorhabdus bovienii SS-2004] gi|289176646|emb|CBJ83455.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus bovienii SS-2004] Length = 269 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 150/293 (51%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLTGNVIQYSEVRNSRLRWPVSEQIMKLA-DQPVLSVRRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + P K H+HV + + + + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRILLNE-SPPEK---HDHVDLIMADGKILR-----YTDP 108 Query: 120 RRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RRFG +L E S+ L LGPEP ++F+ YL K + +K L++ K Sbjct: 109 RRFGAWLWSDNLDECSV------LAHLGPEPLSDAFDGEYLYTLSRHKKTVIKPWLMDNK 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY EAL+ A + P R SL Q Y L I+++L +I+ GG++ Sbjct: 163 VVVGVGNIYANEALYVAHILPERPVNSLTQEEA------YLLADTIKQILHRSIEQGGTT 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L+D++ DG GYF VYGK GE C CG+ I I RSTF+C CQ Sbjct: 217 LKDFLQSDGKPGYFAQELFVYGKKGELC-PTCGEKIESIKLGQRSTFFCRQCQ 268 >gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS] gi|123369434|sp|Q1BAM5|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215637|sp|A1UED7|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS] Length = 296 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIEL-----------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L E +++++VHLGMSG ++ PI P+ +H+ I+ + Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLL------GPI--PKEDHLRIAALFD 112 Query: 107 TNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + K Sbjct: 113 DGTA---LSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY EALWRAK++ R SL + PK L +++ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLTK----PK--LAEILDHAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMRDALGQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 4207] Length = 304 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 151/302 (50%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H R R D P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 127 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 128 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 297 Query: 287 CQ 288 CQ Sbjct: 298 CQ 299 >gi|330466267|ref|YP_004404010.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] gi|328809238|gb|AEB43410.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] Length = 285 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 150/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + H + +R HF+ G+ ++DV RR Sbjct: 1 MPELPEVETVRQGLARWVTGRRIESVEVRHPRAVRRHVAGGAHFADVLAGRTVLDVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ P P+ H+ + + + R + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQ------PATAPEEPHLRVRFRFTDDGPELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGATLPAE-IAHIARDPLDPQFSDADFVTAMRRRRTEVKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA L R T +L + +L+ ++ VL +AI AGG+S Sbjct: 172 SGVGNIYADEALWRAGLHGTRPTDALT------GPAVRRLLGHVRDVLTEAITAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + +VYG+ G+PC CG IRR RS++ C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLNVYGREGQPC-RRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|261207883|ref|ZP_05922568.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289566951|ref|ZP_06447355.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|294617838|ref|ZP_06697449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] gi|260078266|gb|EEW65972.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289161250|gb|EFD09146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|291595911|gb|EFF27193.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] Length = 278 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK++ +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEV-EQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|195978526|ref|YP_002123770.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975231|gb|ACG62757.1| formamidopyrimidine-DNA glycosylase MutM [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 296 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTILGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ + + + +H HV +++T+ + ++Y D R Sbjct: 85 LFDF-GQLVMISHLRMEGKYLL----FSDTVPDQKHFHVFLTMTDGST-----LVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S + R LGPEP +F ++K LL+Q +VAG+ Sbjct: 135 KFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R++ SL K + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAAKVHPERRSASL------KKAEIKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPC-QRCGAAIVKLKVGGRGTHVCPRCQR 296 >gi|119470584|ref|ZP_01613287.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] gi|119446285|gb|EAW27562.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] Length = 269 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +KN VT + ++ ++R+ P G + ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHIKNQVVTKVNIYNASMRWPVPDDVYQ-LEGLTVTNIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E S I+HLGMSG+ + S +P+K +H+HV N+ K R+ NDPR Sbjct: 60 LLHCELG-STILHLGMSGNLRVVDKS--EPLK--KHDHVEFVFAND---KALRL--NDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ L LGPEP ++F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEVHKL--LSKLGPEPLTDNFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PCL+ C + I RST +C++CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCLT-CDNELEEIRLGQRSTVFCSHCQK 269 >gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus ATCC 19977] gi|238688908|sp|B1MDL2|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus] Length = 286 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 30/300 (10%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRR 56 MPELPEVE++RR L +V K + T + H + +R + G++I RR Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIAST-LVYHERAVRRQSGGAVELAGLLAGQQISGTGRR 59 Query: 57 AKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + LEG+ +++VHLGMSG +I PI PQH + +L + + Sbjct: 60 GKYLWLTLEGSSGAQALVVHLGMSGQMLI------GPISRPQHLRIAATLDDGSVLS--- 110 Query: 114 VIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG DLV P+ + +P D F + + K++ +K A Sbjct: 111 --FVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEIKRA 168 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+G+GNIY EALW+A++ R T +G + L +++ V+ A+ Sbjct: 169 LLDQTVVSGVGNIYADEALWQARVHGRRLT------DGMSRAKLTEVLDSAAAVMRLALA 222 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S D YV+++G GYF + YG+ GEPC CG+ +RR RS+++C CQ+ Sbjct: 223 QGGTSFDDLYVNVNGESGYFDRSLEAYGREGEPC-RRCGRAMRREAFMNRSSYFCPSCQR 281 >gi|159897723|ref|YP_001543970.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] gi|238687075|sp|A9B0X2|FPG_HERA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159890762|gb|ABX03842.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] Length = 273 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 156/290 (53%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L +V + K + P F+ A ++I V RRAK Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLIEL+ + ++IVHL M+G ++ + +P +H HV ++L N + ++D Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLV--VAADEPAD--RHTHVVVALDNGRELR-----FHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG LV+ S + LGPEP + F + +K + +K LL+Q ++A Sbjct: 112 PRKFGRWSLVDRSGVAALN--QRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW AK+ P+R SL N + +L + I+ VL ++I+ G++L + Sbjct: 170 GVGNIYADEALWLAKIHPLRSANSLNANE------IAELFEAIKTVLRNSIEHRGTTLVN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G+ G Q YG+TGEPC CG I RIV A RST C CQ Sbjct: 224 YRDAYGASGENQYHLEAYGRTGEPC-RRCGTPIERIVVAQRSTHICPVCQ 272 >gi|69246665|ref|ZP_00604055.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257878418|ref|ZP_05658071.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257882836|ref|ZP_05662489.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257889383|ref|ZP_05669036.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257894396|ref|ZP_05674049.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|258614817|ref|ZP_05712587.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium DO] gi|260560007|ref|ZP_05832185.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|293559953|ref|ZP_06676461.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|294623285|ref|ZP_06702150.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|314937781|ref|ZP_07845098.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|314941673|ref|ZP_07848553.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|314948921|ref|ZP_07852290.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] gi|314950961|ref|ZP_07854028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|314992963|ref|ZP_07858359.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|314996410|ref|ZP_07861453.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|68195139|gb|EAN09597.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257812646|gb|EEV41404.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257818494|gb|EEV45822.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257825743|gb|EEV52369.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257830775|gb|EEV57382.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|260073842|gb|EEW62166.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|291597313|gb|EFF28499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|291606041|gb|EFF35467.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|313589392|gb|EFR68237.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|313592486|gb|EFR71331.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|313596816|gb|EFR75661.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|313599564|gb|EFR78407.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|313642812|gb|EFS07392.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|313644711|gb|EFS09291.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] Length = 278 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HCELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK++ +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEV-EQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|269127638|ref|YP_003301008.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] gi|268312596|gb|ACY98970.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] Length = 297 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 31/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV LH + +R F+A G I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAAEVLHPRAVRRHVGGAADFTARLIGNTIGAARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L EG +I+ HLGMSG ++ + A+ H+ + LT + R + Sbjct: 61 KYLWLPLAEGGGAIVAHLGMSGQLLVGDPARAR------QRHLRVRLTFTDGSHDLRFV- 113 Query: 117 NDPRRFGFMDLVE-----------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 D R FG + + E + P+ + P+P + +F+ ++ + Sbjct: 114 -DQRTFGHLMVAELVPDAFGRAGKEAEAAVPAPVAHIAPDPLEPAFDDEAFYRALRRRRT 172 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K ALL+Q +++G+GNIY EALWRA+L R T +L + + ++++ +++V+ Sbjct: 173 GIKRALLDQSLISGVGNIYADEALWRARLHWARATENLTRAE------VSRVLEGVREVM 226 Query: 226 IDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ AGG+S R YV+++G GYF+ + YG+ GEPC + CG IRR V RS++ C Sbjct: 227 TAALAAGGTSFDRLYVNVNGESGYFERSLEAYGRRGEPC-TRCGTPIRRDVFMNRSSYSC 285 Query: 285 TYCQ 288 CQ Sbjct: 286 PKCQ 289 >gi|226356606|ref|YP_002786346.1| formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] gi|226318596|gb|ACO46592.1| putative formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] Length = 276 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 152/305 (49%), Gaps = 51/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF--SAATRGKKIIDVSRRAK 58 MPELPEVE RR + ++K + + + D PH + + G+++ +SRR K Sbjct: 1 MPELPEVETTRRKIEPLLKGRVI-------QRVEHDSPHRYRDTHLAEGRRVRGLSRRGK 53 Query: 59 YLLIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 YL+++L +L +IVHLGM+G F +E +H VT+S T Sbjct: 54 YLMLQLVAADAADEDPHDLELIVHLGMTGGFRLE---------GGKHTRVTLSTDGGT-- 102 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--- 166 + ++D RRFG M +V P L +GPEP F +F K + Sbjct: 103 ----LHFDDSRRFGKMAVVRPGEYKTMPTLAGMGPEPLSEDFR----EQEFVKAAAQCGA 154 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+QK V+G+GNIY E+LW A++ P +TR D +L Q I++V+ Sbjct: 155 VKPWLLSQKPVSGVGNIYADESLWMARIHPA-QTR-------LKADEARRLYQAIREVMT 206 Query: 227 DAIDAGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A++AGGS+L D Y DG G FQ + Y + G+PC CG I +IV R T +C Sbjct: 207 AAVEAGGSTLSDGTYQQHDGVSGLFQFSHRAYAREGQPC-ERCGTSIEKIVLGQRGTHFC 265 Query: 285 TYCQK 289 CQK Sbjct: 266 PQCQK 270 >gi|294615647|ref|ZP_06695502.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] gi|291591476|gb|EFF23130.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] Length = 278 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 153/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L PK++ +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTL-----RPKEV-EQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|332358992|gb|EGJ36813.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK49] Length = 274 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + + + K ++ D F G++I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQMDL-DAFRQDLLGQEIRSMRRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + +I HL M G ++ + + +H HV +T+ ++Y D Sbjct: 60 LLFYLTDKV-LISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ Y R LGPEP + F + +K LL Q +V G Sbjct: 110 RKFGTMELLRKDQLESYFAARKLGPEPTEADFLLEPFAAALGRSKKPIKPYLLEQTLVVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 170 LGNIYVDEALWRARIHPARPADSL-----KPAEV-KQLREQIIEVLQLGIEKRGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC + CG I +I GR T C +CQK Sbjct: 224 RNALGEDGTMQDFLQVYGKTGHPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|330812395|ref|YP_004356857.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380503|gb|AEA71853.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----MPAAKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPFNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAA------GGISRARYLKLAIEIKRILAHAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGELC-KVCGTGLREIRLGQRASVWCPRCQ 269 >gi|324991455|gb|EGC23388.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK353] Length = 274 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFHLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|238855719|ref|ZP_04646015.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260665505|ref|ZP_05866352.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|282934758|ref|ZP_06339998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|238831665|gb|EEQ24006.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260560773|gb|EEX26750.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|281301169|gb|EFA93473.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] Length = 275 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +R+ L ++ T+ + N+ F + KKII + R AK+L Sbjct: 1 MPEMPEVETVRKTLTELVLGKTIEKAKVWYPNIIIGDSESFCNQLKKKKIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 L L N++I+ HL M G + + A P + +H+HV T+ T+ + YND Sbjct: 61 LFRLSDNITIVSHLRMEGKYRL-----ATPHEEKNKHDHVEFIFTDGTSLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LVET + Q ++ LGPE F Y K N+K LL+Q +V+G Sbjct: 111 RKFGRMQLVETGTEKQKTGIKKLGPEALSEGFTLSYFQRALRNKKKNIKAVLLDQNVVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E LW +K++P R SL D + L + I +V+ AI A G+++ + Sbjct: 171 LGNIYADETLWLSKINPERPGNSL------SCDEITSLYKAINQVISQAIKAHGTTVHSF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G +Q VYG+ G+ C CG +++ AGR T +C CQ+ Sbjct: 225 LDAEGQTGGYQKYLKVYGRAGKKCF-RCGATLQKNHIAGRGTTFCPKCQE 273 >gi|254284042|ref|ZP_04959010.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] gi|219680245|gb|EED36594.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] Length = 268 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 149/290 (51%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +V + + LR+ P G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHVIGQSVVAVDVRDSRLRWPVPDDLDRLV-GGRFTAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + + +++HLGMSGS + S P+ H+HV I L++ + Y+DPR Sbjct: 60 LLDHDHGV-LMIHLGMSGSLRL--VSADTPVMF--HDHVDIGLSSGLTLR-----YHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V+ + L LGPEP F+ L + + + +K +++ +IV G+ Sbjct: 110 RFGSFHWVDDD---HHALLDHLGPEPLSGDFDGALLYRRSRGRKTAVKQFVMDGRIVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKT-RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY EAL+ A + P R R ++ T D I++VL AI+ GG++LRD+ Sbjct: 167 GNIYANEALFMAGIRPDRAAGRVALKRYETLGD-------AIKQVLGGAIEQGGTTLRDF 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V DGS GYF +VYG+ +PC C + GRST +C CQ+ Sbjct: 220 VGGDGSPGYFAQQLAVYGRARQPC-RRCESALTETRLGGRSTVFCKTCQR 268 >gi|306827856|ref|ZP_07461125.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] gi|304429965|gb|EFM33005.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] Length = 275 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLLAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|118582007|ref|YP_903257.1| formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] gi|166198725|sp|A1AV29|FPG_PELPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118504717|gb|ABL01200.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] Length = 267 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + V + + LR P A +G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERDITGKQVQQVLVRAPKLRLPVPPELEEALKGRTVRAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E +IVHLGM+G + HT P +H+HV I T+ + + ++DPR Sbjct: 61 LLECEAGW-LIVHLGMTGFLRLLHT----PQLPGKHDHVDIVFTDGSVLR-----FHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + SL ++P L +GPEP +F+ YL + +K ++N IVAG+ Sbjct: 111 KFGTIAWTTDSLD-KHPLLAGIGPEPLTAAFSGAYLFRVSRTRRVVVKLLIMNMAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL + +L I++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRAASSLSRTE------CERLAVTIREVLQESIDLGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G++ Y AF VYG+ C ++CG + + RST +C CQ+ Sbjct: 220 VEEGTVTYHPLAFDVYGRGHGTC-TSCGGALEAVRLGNRSTVFCPRCQQ 267 >gi|300780911|ref|ZP_07090765.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300532618|gb|EFK53679.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 278 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 155/297 (52%), Gaps = 30/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L + T + LH + +R + + G + RR K+ Sbjct: 1 MPELPEVEVVRRGLDTHIVGSTFDTVEVLHPRAVRGN-DVDLTEILPGLSVTGTGRRGKF 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-SLTNNTNTKKYRVIYND 118 + +EL +++VHL MSG I+ + +P H+ I +L + + + + + D Sbjct: 60 MWLELSDGAAVMVHLRMSGQMIVGEPGL---VDSP---HLRIRALMHGVGSAPFELDFID 113 Query: 119 PRRFG------FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R FG +D + ++ + + P+P + F+ + KKN +K LL Sbjct: 114 QRTFGSWQYTQLIDGIPAAIPH-------IAPDPFETDFDPVATARAIRKKNVAIKTVLL 166 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +V+GIG+IY EA+W A + P RK R+L Q + +L++E + V+ A+ AG Sbjct: 167 DQSVVSGIGSIYADEAMWAAWIKPTRKGRALRQRDAV------RLLEESRAVMARALQAG 220 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+S YV+++G+ GYF + + YG+ EPC + CG I R V GRS+++C CQ Sbjct: 221 GTSFDSLYVNVNGASGYFSRSLNAYGQADEPC-ARCGTPIARTVVNGRSSYFCPVCQ 276 >gi|125718413|ref|YP_001035546.1| formamidopyrimidine-DNA glycosylase [Streptococcus sanguinis SK36] gi|125498330|gb|ABN44996.1| Formamidopyrimidine-DNA glycosylase, putative [Streptococcus sanguinis SK36] Length = 274 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLF----YPDEVPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP F ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLETYFTARKLGPEPTAADFLLPPFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASL-----KPAEV-KRLREQIIEVLQLGIEKKGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|256784972|ref|ZP_05523403.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289768865|ref|ZP_06528243.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|7531122|sp|Q9ZBQ6|FPG_STRCO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|4007732|emb|CAA22416.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|289699064|gb|EFD66493.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 286 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 153/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ LH + +R P F+ + +I SRR Sbjct: 1 MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + +++ HLGMSG +++ P + P H+ I + + + + Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQ------PHETPAEKHLRIRV-RFADALGTELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +TS + + +P D F+ H +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTSADGLPDVIAHIARDPLDPLFDDEAFHHALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGMPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|312898330|ref|ZP_07757720.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] gi|310620249|gb|EFQ03819.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] Length = 273 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 150/292 (51%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHR--KNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +R L V+ T+T DI L R KN + FS A G V R+ Sbjct: 1 MPELPEVETVRATLEPVLTGRTITHIDITLPRLIKNATVEA---FSKALSGCTFTAVGRK 57 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +G+ ++VHL M+GS I + A P+ H+ L K + Y Sbjct: 58 GKYLRLCTDGSSDLLVHLRMTGSLIYD----AAGNNRPKTAHIVFHL------DKGLLYY 107 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + K LGP+ ++ A YL + + +K+ LL+Q + Sbjct: 108 CDVRTFGCLWLAKPGEKTGISGYDDLGPDANSSAVTADYLREKMKASSRTVKSFLLDQTV 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYV EAL+ A + P R+ N K+ +L + I VL + I+ GG+++ Sbjct: 168 LAGLGNIYVDEALFLAGIRPSRRC------NHIGKERTQRLAKAIHTVLAEGIEYGGTTI 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD+V+ G G Q +VYG+ G PC CG +I+ + Q GR T YC +CQ Sbjct: 222 RDFVNGSGREGENQENLAVYGREGTPC-KTCGTLIKYVKQGGRGTHYCPHCQ 272 >gi|300721240|ref|YP_003710510.1| formamidopyrimidine DNA glycosylase [Xenorhabdus nematophila ATCC 19061] gi|297627727|emb|CBJ88253.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus nematophila ATCC 19061] Length = 269 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 151/295 (51%), Gaps = 34/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNIIQYAEVRNSRLRWPVSEQIMKLS-DRPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSF--IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+EL EG II+HLGMSGS ++E K H+HV + + + + Y Sbjct: 60 LLELPEG--WIIIHLGMSGSLRILLEERPPEK------HDHVDLIMADGKTLR-----YT 106 Query: 118 DPRRFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG DL + S+ L LGPEP + F+ YL K + +K L++ Sbjct: 107 DPRRFGAWLWSDDLNKCSV------LSHLGPEPLFDQFDGEYLYSLSRNKKTAIKPWLMD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 K+V G+GNIY EAL+ A + P R SL Q + L I+++L +I+ GG Sbjct: 161 NKVVVGVGNIYANEALFVAHILPERPVHSLTQQEA------HLLADIIKQILHRSIEQGG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++L+D++ DG GYF VYGK GE C S CG+ I I RSTF+C CQ Sbjct: 215 TTLKDFLQSDGKPGYFAQELFVYGKKGELC-SKCGEKIECIKLGQRSTFFCRQCQ 268 >gi|269836816|ref|YP_003319044.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269786079|gb|ACZ38222.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L + T+ + L + P F A G++I D RR K Sbjct: 1 MPELPEVENVRRSLTAAVDGTTIAAVRLGAFTGCIAAPEPDAFVARVTGRRITDFGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLI L+ +I VHL M+G + TS P +H+H+T L + + ++D Sbjct: 61 YLLIALDSGDTIAVHLRMTGELTV--TSPDTPTG--KHHHLTFVLDDGRELR-----FSD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L+ R+LGPEP D+ F A ++ +K LL+Q +A Sbjct: 112 TRKFGRLTLLTPDEAAALD--RSLGPEPLDDRFTAERFAAMLAARSRAVKPLLLDQTFLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A++ P+R SL + +L+ I+ L AI+ GG++LRD Sbjct: 170 GVGNIYADEALFAARIHPLRPANSLTLDEAA------RLLDSIRVTLAAAIERGGTTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G G Q+ ++Y + G+PC CG+ I R+V R T +C CQ Sbjct: 224 YRDGLGRPGNNQHYLNIYHRAEGDPC-PRCGEPIARLVVVQRGTRFCPRCQ 273 >gi|289643137|ref|ZP_06475266.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] gi|289507029|gb|EFD27999.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] Length = 284 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 152/292 (52%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + H + +R F+A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERTLPGRTIATVAVAHPRAVRRHAAGAADFAAVLTGRTIEAACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG ++ T + P H+ + T + ++ R + Sbjct: 61 KYLWLALDSGAALLGHLGMSGQLLVVAT------EKPDETHLRVRFTFSDAGRELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + +V P + + +P D F+ ++ + +K ALL+Q +V Sbjct: 113 DQRTFGGLAVVPADAGVPAP-IAHIARDPLDPGFSDAGFVAAVRRRRTGIKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY E+LWRA L R T +L + L +L+Q +++VL++A+ AGG+S Sbjct: 172 SGIGNIYADESLWRAGLHYARPTGTLTRGE------LNRLLQSVREVLLEALHAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV ++G G F + +VYG+ G PC + C IRR RS+F C CQ Sbjct: 226 ALYVSVNGESGLFDRSLAVYGRAGLPC-TRCETPIRRDAFMNRSSFTCPRCQ 276 >gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 273 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVTTPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTIMSHLRMEGKFRLMDEKDEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP N+F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGENETRSIKKLGPEPLTNTFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E + AK+ P R SL +N K I I ++ +A+ GGS++R Sbjct: 169 AGIGNIYADEICFEAKVQPERPANSL--SNKEIKRIFEATIS----IMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTGEPCVV-CGTPIEKIKLNGRGTHFCPHCQK 273 >gi|21909883|ref|NP_664151.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28896419|ref|NP_802769.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] gi|25090293|sp|Q8K8D0|FPG_STRP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21904070|gb|AAM78954.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28811670|dbj|BAC64602.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] Length = 275 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLL----FPDEVPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P +T S N K +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHP--ETASSRLNKAEIK----RLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|153871079|ref|ZP_02000340.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] gi|152072453|gb|EDN69658.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] Length = 272 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + K LR+ P + +KI + RR KYL Sbjct: 1 MPELPEVETIRRGIATYTVGKKIKIAIVREKRLRWAVPDILTTILPNQKIQKIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E N I++HLGMSGS + + P+K +H+H+ I T++ + + Y+DPR Sbjct: 61 LLECS-NGHILIHLGMSGSLWVLPSD--TPLK--KHDHIDIVFTDD-----FCLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + + +P L LG EP +F YL H K+ +KN +++ IV GI Sbjct: 111 RFGCM-LWTSEPVFDHPLLVKLGIEPLSATFTGKYLHHHAKKRRIVVKNYIMDSHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ L ++I++VL AI+ GG++LR++ Sbjct: 170 GNIYANEALFLAGIHPTCAAGSISLKR------YQHLAKKIKEVLHKAIEMGGTTLRNFS 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQAGRSTFYCTYCQ 288 G GYF+ + VYG+ G C+ +I ++I Q R+T+YC CQ Sbjct: 224 DSTGKPGYFKQSLCVYGRAGLACVQCHNTIIVKKIGQ--RATYYCPMCQ 270 >gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylase [Mycobacterium vanbaalenii PYR-1] gi|166215640|sp|A1T737|FPG_MYCVP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119955982|gb|ABM12987.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium vanbaalenii PYR-1] Length = 293 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 150/306 (49%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + +H R R + P +A I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGRTVTAVRVHHPRAVRRHEAGPADLTARLLDTTITGTGRRG 60 Query: 58 KYLLIEL-----------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L E N +++VHLGMSG ++ P NH+ I+ + Sbjct: 61 KYLWLTLGDGADEPLARRESNFALVVHLGMSGQMLLGDV--------PNANHLRIAALLD 112 Query: 107 TNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + +K Sbjct: 113 DGTT---LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRDAVVKVLRRK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY E+LWRAK++ R +G + L +L+ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADESLWRAKINGARLA------SGVSRAKLAELLGAAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMTDALAQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716] Length = 279 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + T + +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTGA----EVDKHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL D + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTD------DQIKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|226310993|ref|YP_002770887.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|254789429|sp|C0Z7Z0|FPG_BREBN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226093941|dbj|BAH42383.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 276 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L ++ T+ + +H + + D F + G+ I D+ RRAK Sbjct: 1 MPELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ L ++ ++ HL M G + + P++ +H HV T+ T + Y D Sbjct: 61 FIQFFLNEDV-LVSHLRMEGRYGVYQAD--DPVE--KHTHVVFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL + PL LG EP D SF L +++ +K LLNQ+ + Sbjct: 111 VRQFGTMDLFPKGKETTIGPLAKLGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L++A + P + L T K+++ +L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDESLFKAGIHPEKPAGKL-----TDKEVI-RLHESIVSTLQEAVEQGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ + VYG+ E C + CG I R V GR T C CQK Sbjct: 225 YVNGQGEMGMFQQSLLVYGRKDEAC-TKCGAEIIRFVVGGRGTHICPDCQK 274 >gi|333024193|ref|ZP_08452257.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332744045|gb|EGJ74486.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 284 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 154/295 (52%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV LH +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHLAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + L+G +++ HLGMSG +++ H + A+ +H V I + T+ + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAE-----RHLRVRIGFEDALGTE---LR 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L ET + + +P D F+ +K + +K ALL+Q Sbjct: 113 FVDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQS 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +++G+GNIY EALWRA+L R T L + P+ +L+ ++ V+ A+ GG+S Sbjct: 173 LISGVGNIYADEALWRARLHYDRPTAGLTR----PR--TDELLGHVRDVMNAALAVGGTS 226 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|327463080|gb|EGF09401.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1] gi|327474681|gb|EGF20086.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK408] gi|327490239|gb|EGF22027.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1058] Length = 274 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D F + +K LL Q +V G+ Sbjct: 111 KFGTMELLNKDQLEFYFAARKLGPEPTDADFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA+L P R + SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARLHPARPSASL-----KPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC + CG I +I +GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGHPC-ARCGSPIEKIKLSGRGTHLCPRCQK 272 >gi|312864546|ref|ZP_07724777.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] gi|311099673|gb|EFQ57886.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] Length = 273 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T+ + + L F G+ + + RR KYL Sbjct: 1 MPELPEVENVRRGLERQILGKTIKTVKVTYPKLVRTGVEDFQLLLPGQTVQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL G L II HL M G + + + + +H H + T+ T ++Y D R Sbjct: 61 IFELTGGL-IISHLRMEGKYFL----FSDQLPTNKHFHAFFTFTDGTT-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+ + S + Y + LGPEP +F + + +K+ LL+Q +VAG+ Sbjct: 111 KFGTMEYLPKSQEAAYFLSKKLGPEPTKETFKLAPFERTLVESHRPIKSYLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW AK+ P R++ SL P +I +L + ++L + I GGS++R Y Sbjct: 171 GNIYADEVLWAAKVHPERRSDSL-----RPAEI-KRLHDQTIRILQEGIKRGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ GE C S CG I +I GR + YC CQK Sbjct: 225 NTLGEDGSMQDFLEVYGREGELC-SRCGSTIEKIKVGGRGSHYCPKCQK 272 >gi|47779378|gb|AAT38607.1| predicted formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium eBACHOT4E07] Length = 269 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 158/291 (54%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + +I +H +LR+ + S ++ K I ++SRRAKY+ Sbjct: 1 MPELPEVETTVRAISK-FQNKILKEIIVHNAHLRWKVDKNISQLSKNKLIKEISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN---PQHNHVTISLTNNTNTKKYRVIYN 117 LI + S+++HLGMSG I++ I N +H+H+ + K ++++N Sbjct: 60 LIHFNDS-SLMIHLGMSGKLRIQN------IGNNFFKKHDHIELIFD------KEKIVFN 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D RRFG + ++ ++ + LG EP FN YL KN ++K +++QK+V Sbjct: 107 DTRRFGSIHFTKSFKNHRL--IENLGVEPLSREFNKDYLFEICRIKNISIKKLIMDQKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ AK+ P R ++ + +L I++VL AI GG++L+ Sbjct: 165 VGVGNIYASESLFLAKIKPNRLSKKISLKECD------QLTNAIKRVLRYAIRKGGTTLK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ DGS GYF +VY + E C NC I+++ R++F+C CQ Sbjct: 219 DFYSADGSEGYFNLNLNVYDREDENC-KNCKSKIKKVTIGQRASFFCDSCQ 268 >gi|110835444|ref|YP_694303.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] gi|122959249|sp|Q0VLB7|FPG_ALCBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110648555|emb|CAL18031.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] Length = 269 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHLQGRILKSVTVREPRLRWPVSEAIYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE +++HLGMSG+ + P++ +H+HV + L + + +NDPR Sbjct: 60 LIELEHG-QLLIHLGMSGTLRVVDMDL--PLR--KHDHVDLLLDSGKVLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + L++LGPEP +SFN +L + + +K+ +++ V G+ Sbjct: 110 RFG--SVLFQGGDQPHSLLQSLGPEPLSDSFNGQWLFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLRDY 239 GNIY E+L+ A + P R G Y+ + E I++VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAA-------GRISLARYQALAEAIKRVLAQAIEAGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PC+ C +++ RST YC CQ+ Sbjct: 221 TRADGQPGYFAQSLNVYGRAGQPCV-QCDAILKADRHGQRSTAYCPQCQR 269 >gi|145593839|ref|YP_001158136.1| formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] gi|189044675|sp|A4X4F8|FPG_SALTO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145303176|gb|ABP53758.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] Length = 287 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 152/293 (51%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + ++ LH + +R HF+ R + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTDRRIAEVQVLHPRAVRRHAAGAAHFADVLRETTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ P P H+ + + + R + Sbjct: 61 KYLWLPLDSGDAVVGHLGMSGQLLLQ------PAAAPDETHLRVRFRFADDGPELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + + ++ + P + + +P D F+ ++ + +K ALL+Q + Sbjct: 113 DQRTFGGLSV--SAGGAELPTEIAHIARDPLDPEFSDATFVAALRRRRTEIKRALLDQTL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +G + +L+ ++ VL +A+ GG+S Sbjct: 171 LSGVGNIYADEALWRARLHGTRPT------DGLTGPAVLRLLGHVRDVLGEAVKEGGTSF 224 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG+ +RR RS+F C CQ Sbjct: 225 DALYVNVNGESGYFDRALNVYGRADQPC-RRCGEPVRREAFMNRSSFSCPRCQ 276 >gi|302522138|ref|ZP_07274480.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|318056549|ref|ZP_07975272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actG] gi|318076723|ref|ZP_07984055.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actF] gi|302431033|gb|EFL02849.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 284 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 154/295 (52%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV LH +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEGNL-SIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + L+G +++ HLGMSG +++ H + A+ +H V I + T+ + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPAE-----RHLRVRIGFDDALGTE---LR 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L ET + + +P D F+ +K + +K ALL+Q Sbjct: 113 FVDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQS 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +++G+GNIY EALWRA+L R T L + P+ +L+ ++ V+ A+ GG+S Sbjct: 173 LISGVGNIYADEALWRARLHYDRPTAGLTR----PR--TDELLGHVRDVMNAALAVGGTS 226 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|322374469|ref|ZP_08048983.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] gi|321279969|gb|EFX57008.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] Length = 274 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ + + + K ++ D F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEVRYPKMIKTDL-DEFRKEVPGRVIESIGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L+ + +I HL M G + P + P+ H HV I + + ++Y Sbjct: 60 LLFYLKDKV-LISHLRMEGKYFY------YPDQVPERKHAHVLIHFEDGST-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFVSKKLGPEPIEQDFDLQSFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T ++ L Q I VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTL-----TAEEALAIHDQTI-AVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|325694808|gb|EGD36713.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK150] Length = 274 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLF----YPDEVPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|306825397|ref|ZP_07458737.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432335|gb|EFM35311.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 274 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ I + + K ++ D F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDL-DEFQREVPGQVIESIGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + +I HL M G + I +H HV I + ++Y D Sbjct: 60 LLFFLTDKV-LISHLRMEGKYFY----YPDQIPERKHAHVLIHFEDGGT-----LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ L Y + LGPEP + +F+ K +K+ LL Q +VAG Sbjct: 110 RKFGTMELLAPDLLDAYFVSKKLGPEPREKNFDLQSFQVALAKSKKPIKSHLLAQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LWRA++ P R ++SL + T + + VL A++ GGS++R Y Sbjct: 170 LGNIYVDEVLWRAQVHPARPSQSLTEEEAT------AVHDQTIAVLGQAVEKGGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 224 TNAFGEDGTMQDFHQVYDKTGQAC-SRCGTIIEKFQLGGRGTHFCPQCQR 272 >gi|51244765|ref|YP_064649.1| formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] gi|81692916|sp|Q6APT2|FPG_DESPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50875802|emb|CAG35642.1| probable formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] Length = 277 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 154/292 (52%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF-SAATRGKKIIDVSRRAKY 59 MPELPEVEII R + ++ T+ + K LR P + GK+I + RR KY Sbjct: 1 MPELPEVEIILRGISPLICGRTIVAVGGSGKQLRLPLPLPELNRDASGKEITRLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + I L +++HLGM+G + A+ +H+H L NN +++R YND Sbjct: 61 ISIFLNDGGILVLHLGMTGQLGVFPKEQARA----KHDHFWCRLDNN---QEFR--YNDT 111 Query: 120 RRFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + + S Q + LGPEP +F A YL K+ +KN +++ IV Sbjct: 112 RRFGSIRFLPAGKSRMLQESLYQKLGPEPLGETFTADYLRRAAEGKSLAIKNFIMDSHIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E+L++A + P R +S+ Q KL + IQ++L+ AID GGS++ Sbjct: 172 VGIGNIYANESLFKAAIHPARSVQSIEQEE------WEKLARCIQQILLHAIDCGGSTIS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ G GYFQ F VYGK PC +C I GR++F+C CQ+ Sbjct: 226 DFVNAKGGQGYFQMNFKVYGKKSLPC-PHCQGPISSEKIGGRASFFCPSCQR 276 >gi|94266953|ref|ZP_01290604.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452358|gb|EAT02983.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 342 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 156/332 (46%), Gaps = 54/332 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + + +LR P G I V RRAKY Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDSVEASGLSLRRPVPLAALCELAVGAVITGVERRAKY 81 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS----------------- 102 LL++L+ +++HLGM+G T+ +P + +H+H+ I Sbjct: 82 LLLQLDNGSLVVIHLGMTGKLYPAATT--EPPR--KHDHLVIKMGTDLFFTSTTPEATPG 137 Query: 103 -LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-NSFNAIYLTHQF 160 L N + + V +ND RRFG + + P L LGPEP D F A YL Sbjct: 138 MLVKNKSVPIFEVRFNDCRRFGLVAVYGPGEAVAPPLLVGLGPEPLDKQQFTAAYLHRCC 197 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ + +KN L++ ++V GIGNIY E L+ A +SP + + +L+ Sbjct: 198 RQRRTPIKNLLMDNRVVVGIGNIYANEILFAAGISPFTSAARIGRRR------AGRLVAA 251 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG------------ 268 +++L AI AGG+++ D+ + G GYFQ +VYG+ G PC C Sbjct: 252 ARQILTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPGYADHPPAAGA 310 Query: 269 -----------QMIRRIVQAGRSTFYCTYCQK 289 +I R +QAGR+TF+C CQ+ Sbjct: 311 ATTKKVAKGVKPVIERQIQAGRATFFCPRCQR 342 >gi|257875614|ref|ZP_05655267.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] gi|257809780|gb|EEV38600.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] Length = 280 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 155/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ N T+ +I R + P FSA +G++ RR K Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPI-FSALLKGQRFEKFERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L + +I HL M G + E+ + PI + +H HV T+ + ++ Y+D Sbjct: 60 FLIFKLT-DYDLISHLRMEGKY--EYFE-SDPIVD-KHTHVIFHFTDGS-----QLNYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+ Y + LGPEP F + +K LL+QK+V Sbjct: 110 VRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+AK+ P + SL TP + L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAKIHPEQPADSL-----TPAEANV-LHQAIIDVLERAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 224 YLNALGEAGKFQMSLNVYGQTGNPC-GRCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|307703776|ref|ZP_07640717.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] gi|307622611|gb|EFO01607.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] Length = 274 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ K ++ +I + K ++ D F G+ I + RR K Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEIT-YPKMIKTDL-DEFQKEVSGQVIESMGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIY 116 YLL L + +I HL M G + P + P+ H HV I + ++Y Sbjct: 59 YLLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFIRFEDGGT-----LVY 106 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q + Sbjct: 107 EDVRKFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTL 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E LWRA++ P R +++L T ++ L Q I VL A++ GGS++ Sbjct: 167 VAGLGNIYVDEVLWRAQVHPARPSQTL-----TAEEALAIHDQTI-AVLGQAVEKGGSTI 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R Y + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 221 RTYTNAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|238063284|ref|ZP_04607993.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885095|gb|EEP73923.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 285 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + H + +R P HF+ G+ + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAGVEVRHPRAIRRHLAGPAHFADVLAGRTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +I+ HLGMSG +++ + A + H+ + + + R + Sbjct: 61 KYLWLPLNSGDAIVGHLGMSGQLLLQPATAADEL------HLRVRFRFADDGPELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG L ++ + PP + + +P D F+ ++ + +K ALL+Q + Sbjct: 113 DQRTFG--GLAVSAGGAELPPEIAHIARDPMDPGFSDGAFVAALLRRRTEVKRALLDQTL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+GIGNIY EALWRAKL + T L +LI ++ VL +A+ GG+S Sbjct: 171 VSGIGNIYADEALWRAKLHGAQPTDQLTAPAAQ------RLIGHVRDVLGEAVKEGGTSF 224 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A + YG+ GEPC CG +RR RS++ C CQ Sbjct: 225 DALYVNVNGESGYFDRALNAYGREGEPC-RRCGTPLRREAFMNRSSYSCPRCQ 276 >gi|332304442|ref|YP_004432293.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171771|gb|AEE21025.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 270 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 25/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + K LR+ P A G ++ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQQIKRVVVRHKQLRWLVPDEVHLA-EGLRVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + SII+HLGMSG I ++ P+ +H+H+ I L N + +ND R Sbjct: 60 FIDTDAG-SIILHLGMSGKLRIVNSDT--PV--IKHDHLDIVLANGVCLR-----FNDAR 109 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + D+ E + + LGPEP F+ L K+ +KN +++ K+V Sbjct: 110 RFGACLWQDVSEPEIGM----IAALGPEPLTADFDGQRLYDLSRTKSVAVKNFIMDNKVV 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A + P + + + K L I+ VL AI+ GG++L+ Sbjct: 166 VGVGNIYANEALFIAGIDPRKAAKKV------SKKTYLALGDIIKDVLAKAIEQGGTTLK 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ DG+ GYF VYG+ GE C C I+ + R+TF+C CQ Sbjct: 220 DFTQADGNPGYFAQHLRVYGRKGEAC-EVCASEIQSVTLGQRNTFFCEQCQ 269 >gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 289 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 155/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ ++ LH + +R F+A +G + RR Sbjct: 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + + S++ HLGMSG +++ A + +H + IS ++ T+ + + Sbjct: 61 KYLWLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T SL + +L+ I+ V+ A+ AGG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTASLTRPRSA------ELLGHIRDVMNAALAAGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|254426970|ref|ZP_05040677.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] gi|196193139|gb|EDX88098.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] Length = 269 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 155/290 (53%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +T + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHVQGRILTSVTVREPRLRWPVSEALYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE +++HLGMSG+ + P++ +H+HV + L + + +NDPR Sbjct: 60 LIELEHG-QVLIHLGMSGTLRV--VDATLPLR--KHDHVDLLLDSGKALR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + + + L++LGPEP +FN + + + +K+ +++ V G+ Sbjct: 110 RFG--TVLFQAGEEPHSLLQSLGPEPLSEAFNGERMFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSLRDY 239 GNIY E+L+ A + P R G Y+ + E I+ VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAA-------GRISLARYQALAEAIKVVLARAIEAGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PCL C +++ RST YC CQ+ Sbjct: 221 TRADGQPGYFAQSLNVYGRAGQPCL-QCEAILKADRHGQRSTAYCPQCQR 269 >gi|293365237|ref|ZP_06611954.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] gi|291316687|gb|EFE57123.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] Length = 288 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ K ++ +I + K ++ D F G+ I + RR K Sbjct: 15 MPELPEVETVRRGLEKLILGKKISSVEIT-YPKMIKTDL-DEFQKEVSGQVIESMGRRGK 72 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIY 116 YLL L + +I HL M G + P + P+ H HV I + ++Y Sbjct: 73 YLLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFIRFEDGGT-----LVY 120 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q + Sbjct: 121 EDVRKFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTL 180 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E LWRA++ P R +++L T ++ L Q I VL A++ GGS++ Sbjct: 181 VAGLGNIYVDEVLWRAQVHPARPSQTL-----TAEEALAIHDQTI-AVLGQAVEKGGSTI 234 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R Y + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 235 RTYTNAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 286 >gi|323351177|ref|ZP_08086833.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] gi|322122401|gb|EFX94112.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] Length = 274 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFHLTGGV-LISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSL-----KPTEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|317129904|ref|YP_004096186.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] gi|315474852|gb|ADU31455.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] Length = 278 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ N T+ D+ + + D F G+ D+ RR K Sbjct: 1 MPELPEVETVKRTLKKLILNETIKDVRVSWPKIIKEPDDIDEFRLKLIGQTFHDIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ L+ + ++I HL M G + I + +P K H HV L +N + Y D Sbjct: 61 FLVFLLD-DYALISHLRMEGRYGI-FSEDEEPDK---HTHVRFILESNKELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y + PL LG EP N F L H +K N+K LL+Q V Sbjct: 111 VRKFGTMHLFPKGEEYNHLPLIQLGVEPFSNEFTPERLYHLLNKTTRNIKATLLDQTYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P + L N+ + KL + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRANIHPEVASNELNTND------VKKLHKSIVDTLEEAVNMGGSSIKT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ G C CG I + V +GR T C CQK Sbjct: 225 YVNGQGEMGMFQQTLYVYGRKGMEC-KVCGDEIVKNVVSGRGTHTCPSCQK 274 >gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L + + TV + LH + +R DF H +G +I Sbjct: 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRL----KGHRIGTP 56 Query: 54 SRRAKYLLIELEG-NLSIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTNNTNTKK 111 SRR KYL + LE + SI+ HLGMSG +++ HT+ + +H + + T+ +T+ Sbjct: 57 SRRGKYLWLPLEDTDQSILAHLGMSGQLLVQPHTA-----PDEKHLRIRVRFTDALDTE- 110 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + L + + + + +P D F+ +K S +K AL Sbjct: 111 --LRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRAL 168 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY EALWRA+L R T +L + P+ + L+ ++ V+ A+ Sbjct: 169 LDQSLISGVGNIYADEALWRARLHYERPTATLTR----PRTL--SLLGHVRDVMNAALAV 222 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 223 GGTSFDSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRPWMNRSSYYCPKCQR 280 >gi|160914227|ref|ZP_02076448.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] gi|158433854|gb|EDP12143.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] Length = 275 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 143/290 (49%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + D + N+ F R KKI R KYL Sbjct: 1 MPELPEVETVVRTLEHQLQQIEIMDCRVLWDNIIAMDTQAFIETIRHKKIQGYHRHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G+ IVHL M G F ++ A +H HV SL++ + Y+D R Sbjct: 61 MFDL-GSYDFIVHLRMEGKFYVQ----APQEPYDKHTHVIFSLSDGRELR-----YHDTR 110 Query: 121 RFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M L YQ YP +GP+ D A L HKK + LK LL+Q ++AG Sbjct: 111 KFGKMVLYPKLENYQEYPCFAHIGPDAFDEELCADSLYRMLHKKKTYLKAVLLDQSVMAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + ++ P K L + + LI E +++L AI AGG+++R Y Sbjct: 171 IGNIYADEICYAMRMHPETKISHLRKKD------FAVLITETRRILSGAIRAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + GE C NC I++I AGR T+YC CQK Sbjct: 225 TSSLGVDGRFQLKLKVHARKGEAC-PNCQGEIKKITVAGRGTYYCPTCQK 273 >gi|256823439|ref|YP_003147402.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] gi|256796978|gb|ACV27634.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] Length = 269 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + +T + +++ LR+ + G D+ RRAKY+ Sbjct: 1 MPELPEVETTKNGLAPHIVGKRITAVNIYQPQLRWPVAEEATTLV-GLVSSDIERRAKYM 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L S+++HLGMSG+ ++ S K +H+H + + T + +NDP Sbjct: 60 LWHFSTG-SLVMHLGMSGTMRVVSAQSALK-----KHDHFEVVFDDRTALR-----FNDP 108 Query: 120 RRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG +LK L LGPEP + F+ YL K+ +KNA+++ K+V Sbjct: 109 RRFGAILWQPKGETLKV----LSQLGPEPLSDDFDGQYLHQALTKRKGAIKNAVMDNKVV 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ + + P R N L I+ VL AI GG++L+ Sbjct: 165 VGVGNIYASESLFMSGIHPKRAA------NKVSLARCKLLAGFIKTVLEKAIGEGGTTLK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DGS GYF +VYG+ PC + CG +I++ V RS+FYC CQ+ Sbjct: 219 DFTQTDGSPGYFAQQLNVYGRADLPC-NQCGAIIKKQVIGQRSSFYCPKCQR 269 >gi|257454005|ref|ZP_05619279.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] gi|257448483|gb|EEV23452.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] Length = 296 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 153/295 (51%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ +L ++ N TV + + + LR+ P + ++ID+ RRAKYL Sbjct: 1 MPELPEVQTTATSLQPLL-NQTVEKVSVFQPKLRWVVPDDLVSLI-DYQLIDIERRAKYL 58 Query: 61 LIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ +G + +++HLGMSGS P+ + H + LT N K ++ Y+ Sbjct: 59 ILTFKGGAAQKKLLIHLGMSGSL------QQHPVGFDKRKHDHVILTFNDGKKLTQLHYH 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL----KNALLN 173 DPRRFG + ++ Y+ + LG EP F+A YL H H + + K+ ++ Sbjct: 113 DPRRFGMLLWLD---DYEDKLITHLGVEPLSEDFSADYLYHHIHNRKKPIERPIKSVIMA 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IV G+GNIY E+L+ +K+ P+ + L L+ I++VL +I+ GG Sbjct: 170 QEIVVGVGNIYATESLFLSKIHPLTPAHLIGHEQ------LTTLVAHIRQVLQTSIEKGG 223 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+L+D+ DG GYFQ VYG G C S CG I + R++ +C CQ Sbjct: 224 STLKDFTVADGQTGYFQQTLLVYGHKGADCPS-CGTTIDNVKINQRASTFCPTCQ 277 >gi|91226564|ref|ZP_01261288.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] gi|91189038|gb|EAS75320.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] Length = 252 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/272 (34%), Positives = 138/272 (50%), Gaps = 20/272 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M T+ LR+D P G+ I +SRRAKYLLIE + IVHLGMS Sbjct: 1 MVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYLLIETNTG-TAIVHLGMS 58 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P K H+HV + L++ + YNDPRRFG + + + Sbjct: 59 GSLRVLDADFP-PAK---HDHVDLKLSSGKILR-----YNDPRRFG--AWLWCAPGESHA 107 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L +GPEP FNA Y+ + K +K +++ K+V G+GNIY E+L+++++ P Sbjct: 108 VLANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGVGNIYANESLFKSRIHPS 167 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R L L++ I+ L AI GG++L+D+ DG GYF VYG Sbjct: 168 RPAGKLTSQE------WRLLVENIKMTLEIAITQGGTTLKDFAQADGKPGYFAQELLVYG 221 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 K GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 KPGEPC-PECGERLQELKIGQRNTFFCSECQK 252 >gi|327460965|gb|EGF07298.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1057] Length = 274 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDRFVHDLPGQTIEMIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + ++ HL M G ++ + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LVSHLRMEGKYLFYPDE----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLFPPFAAALSCSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R +N P ++ +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPA-----DNLKPAEV-KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|258512306|ref|YP_003185740.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479032|gb|ACV59351.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 285 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 153/293 (52%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL +L+ + ++ HL M G + + + S P+ H HV L + + Y Sbjct: 61 LLFQLD-QVLLVSHLRMEGRYAVANPS------EPELPHTHVVFRLASGRELR-----YA 108 Query: 118 DPRRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R+FG MD V LK + P L LGPEP D + + L ++ + + +K+ LL+Q+ Sbjct: 109 DVRQFGTMDAV---LKGEPLPKGLAELGPEPFDPALDGAALHERWRGRRAPIKSLLLDQR 165 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYV EAL+ A + P L + L L++EI+ VL AI GGSS Sbjct: 166 QIAGLGNIYVDEALFAAGIHP------LTPAGAVGAEELGVLLREIRDVLARAIREGGSS 219 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +R + G G FQ +VYG+ GEPC CG I++I AGR T C CQ Sbjct: 220 VRSFRDGYGRHGGFQIQLAVYGRAGEPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|239944598|ref|ZP_04696535.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ LH +++R F+A RG ++ RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E + S++ HLGMSG +++ P P H+ I + + + + + Sbjct: 61 KYLWVPIEEASASLLGHLGMSGQLLVQ------PADAPDEKHLRIRMRFD-DALGTELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRAKL R T +L + PK +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRAKLHYDRPTATLTR----PKSA--ELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC + C +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-NRCSTPMRRRAWMNRSSYYCPRCQR 280 >gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023] Length = 273 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENDEVTK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E ++AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFKAKVRPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKTGEPC+ CG I ++ GR T +C +CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTGEPCVV-CGTPIEKMKLNGRGTHFCPHCQK 273 >gi|293569013|ref|ZP_06680326.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] gi|291588446|gb|EFF20281.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] Length = 278 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 150/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + L K + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + +I HL M G + + T PI +H HV + + + YND Sbjct: 61 LIFHLD-HYELISHLRMEGKY--QFTKENTPID--KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRSKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|94676562|ref|YP_588638.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166215610|sp|Q1LTS6|FPG_BAUCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|94219712|gb|ABF13871.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 269 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR + + + + LR+ + +++I + RRAKYL Sbjct: 1 MPELPEVEIIRRGIEPWVVGHIIQRAEIRNNQLRWPIDQEI-ISIHQRRVISLKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L II+H GMSG I A + +H+H+ + ++NN + Y DPR Sbjct: 60 LMQLHHGW-IIIHFGMSGRLRI----LAHMLPPEKHDHIDLIMSNNCILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L +L + L LG EP + F+ +L + K+ +K L+ K+V GI Sbjct: 110 RFGAW-LWSNNLD-KMSILNNLGVEPLSDQFDGHWLFTKSRNKSLLIKQFLMTNKLVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + SL + L + I+ +L+ +I+ GG++LRD++ Sbjct: 168 GNIYANEALFAAGILPSRASCSLKEQEAL------LLARSIKAILLSSIEEGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G F VYG+ GEPC + CG+ I+ RS+F+C CQ Sbjct: 222 QSDGRDGLFAKKLQVYGRHGEPCYT-CGEFIQIAKYGQRSSFFCPSCQ 268 >gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262] gi|21362544|sp|Q92BF1|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262] Length = 273 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVTK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVHPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTGEPCVI-CGTPIEKIKLNGRGTHFCPHCQK 273 >gi|270292906|ref|ZP_06199117.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] gi|270278885|gb|EFA24731.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] Length = 274 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ + + + K ++ D F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKRISSLEIRYPKMIKTDL-EEFQKELPGQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFQFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLEAYFISKKLGPEPKDQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R ++SL + + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARSSQSLTAEEASA------IHDQTIAVLRQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKAGQEC-SRCGTLIEKIQLGGRGTHFCPQCQR 272 >gi|329117411|ref|ZP_08246128.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] gi|326907816|gb|EGE54730.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] Length = 274 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L +++ ++ + + N+ ++D F A +G+ I VSRR KY Sbjct: 1 MPELPEVETVRRGLEQLVRGKVISQVTVKVPNMVKYDC-LAFELALKGQTIEAVSRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L G L +I HL M G +++ + P+ +H HV + T+ + ++Y D Sbjct: 60 LIFDL-GQLVMISHLRMEGKYLLFNDFV--PVN--KHFHVFFTFTDGST-----LVYQDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG +L+E S ++ + +GPEP F +K LL+Q +VAG Sbjct: 110 RKFGTFNLIEKSQLDRFFLEKKIGPEPTKADFKLKPFERALLSSQKIIKPWLLDQSLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P++ + SL K + ++ + +L ++ GGS++R Y Sbjct: 170 LGNIYVDEVLWAAKVHPMKLSNSL------KKAEIKRIHDQAIAILALGVEMGGSTVRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ +PC CG I++I AGR T +C CQK Sbjct: 224 QNTLGMNGSMQDYLMVYGQKDKPC-PRCGTAIQKIKVAGRGTHFCPRCQK 272 >gi|311898537|dbj|BAJ30945.1| putative formamidopyrimidine-DNA glycosylase/AP lyase [Kitasatospora setae KM-6054] Length = 285 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 144/296 (48%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + LH + +R FSA RG+ + + RR Sbjct: 1 MPELPEVEVVRRGLARWAAGRTVAEARVLHPRAVRRQAGGADEFSALLRGRTLGEPQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L LS+I HLGMSG +++ A + H + T+ ++ Sbjct: 61 KYLWVPLGDGLSMIGHLGMSGQLLVQEPEMA----DSPHLRARLRFTDGGTELRF----V 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLG---PEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + + E R+L +P D F+ K + +K ALL+Q Sbjct: 113 DQRTFGGLAVEEAEDGDPEATPRSLAHIARDPLDARFDDDAFARALRAKRTTVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR++L R T +L + +L+ + V+ A+ GG+ Sbjct: 173 TLVSGVGNIYADEALWRSRLHFDRPTATLT------RPAALELLGHARDVMTAALAVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF YG+ GEPC CG +RR RS++ C CQ+ Sbjct: 227 SFDSMYVNVNGESGYFSRDLDAYGREGEPC-RRCGTPMRRDAWMNRSSYSCPKCQR 281 >gi|152994665|ref|YP_001339500.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] gi|189044664|sp|A6VSY6|FPG_MARMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150835589|gb|ABR69565.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] Length = 272 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + ++ + + + LR+ S+ G++I +SRR KY+ Sbjct: 1 MPELPEVETTLRGIEPKLVGRSLARVDIRQPKLRWLITPELSSEMVGEEITHLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYND 118 I ++IVHLGMSGS P + P H+HV ++ +Y D Sbjct: 61 GIHTSKG-TLIVHLGMSGSLYF------VPAETPPLFHDHVDFCFADDDVWLRY----TD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + L T +++ ++ LGPEP + FNA L + + +K +++ K+V Sbjct: 110 PRRFGAI-LWTTEDWHEHELIKHLGPEPLSDMFNADMLYVRAKGRKVPIKTFIMDSKVVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL++A + P R ++ K L +L++ I+ VL AI GG++L+D Sbjct: 169 GVGNIYANEALFKAGIRPDRLAGNI------SKARLARLVECIKVVLAAAIKQGGTTLKD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V DG GYF+ +VYG+ + C+ C + ++ I QA RST +C CQ Sbjct: 223 FVGGDGKPGYFKQELAVYGRANKACVI-CSKPLKEIRQAQRSTVFCINCQ 271 >gi|169831563|ref|YP_001717545.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] gi|169638407|gb|ACA59913.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] Length = 276 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 144/290 (49%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I R+L + + V L K + P F+ G+KI+ +SRR KY Sbjct: 1 MPELPEVETIVRDLGARLTGLMVERAEVLLPKVVAAPAPEEFARLIAGRKILGLSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LIEL +I+HL M+G + +T+ +P P+H H+ + L + + D Sbjct: 61 ILIELSRGWVLILHLRMTGQLV--YTTVLEPF--PKHTHLVLHLDQGV------LRFTDL 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG LV + P LR LG EP F + + +K LL+Q + G Sbjct: 111 RQFGRASLVPAREVRRVPGLRELGVEPLGAEFVKEDFIRKLARSRRMIKPLLLDQTFLTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 +GNIY EAL RA + P R+ L + GT LY+ I+E VL + + G+S++ Sbjct: 171 LGNIYTDEALHRAGIHPERRAADLDTREAGT----LYRAIRE---VLAEGVAFRGTSVQH 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV G G FQ VYGK G PC CG I RI GR T YC CQ Sbjct: 224 YVDGSGQRGRFQEILRVYGKKGVPC-PVCGVPIERIRCGGRGTHYCPECQ 272 >gi|326318315|ref|YP_004235987.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375151|gb|ADX47420.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 271 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ RR + M + + L K+LR+ P G +++ V RR Sbjct: 1 MPELPEVEVTRRGIADAMAGAVIESVVLG-KSLRWPLGCAPEDLH----GLRVVAVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIY 116 KYLL++L+ + +++HLGMSGS + ++ ++P H+H ++ + T K Sbjct: 56 KYLLLDLDRGM-LLIHLGMSGSLRFDRST-----ESPGAHDHFLMATSRGTLRLK----- 104 Query: 117 NDPRRFGFMDLVETSLKYQYPPL-RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + ++ Q L LG EP ++F +K LL + Sbjct: 105 -DPRRFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGR 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+ Sbjct: 164 AVVGVGNIYASEALFLAGIRPTARASSIGPLRAR------RLHEAIRTVLARAVERGGST 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 218 LRDFAGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|291302738|ref|YP_003514016.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290571958|gb|ADD44923.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 280 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 149/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + +TD+ + H + +R P F A G I RR Sbjct: 1 MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + L+ +++ HLGMSG +IE P P H+ I L + + R + Sbjct: 61 KFLWLPLDSGDALLCHLGMSGQLLIE------PPDKPDGPHLRIRLVFDQAEHQLRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M LV + + P+ D +F+ + + + +K ALL+Q ++ Sbjct: 113 DQRTFGEM-LVSPDGAELPGEIAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQSLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L ++ L + +L++ I++V A++AGG+S Sbjct: 172 SGVGNIYADEALWRARLHGNHPSQELSDA------VARELVEHIREVFDAALNAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G GYF + +VYG+ EPC CG + RI RS+F+C CQ Sbjct: 226 ALYVNTNGESGYFDRSLAVYGRAEEPC-RRCGTPVERIKFTNRSSFHCPSCQ 276 >gi|315612999|ref|ZP_07887910.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] gi|315315109|gb|EFU63150.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] Length = 274 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 147/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ +++I + + K ++ D F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEITYPKMIKTDL-KEFQKEVPGQVIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALSKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKTGQAC-SRCGAVIEKFQLGGRGTHFCPQCQR 272 >gi|271969196|ref|YP_003343392.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] gi|270512371|gb|ACZ90649.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] Length = 288 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + LH + +R P FS+ +G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRVIAHAEVLHPRAIRRHVPGAEEFSSRLKGRTIGSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIY 116 KYL + L+G+ +I+ HLGMSG ++ +P P+ H V I T+ ++ Sbjct: 61 KYLWLPLDGSDAILAHLGMSGQLLV-----VEPGSAPERHLRVRIGFTDGGPDLRF---- 111 Query: 117 NDPRRFGFMDLVETSLKYQYP---PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + + + P P+ + +P + F+ + + + +K ALL+ Sbjct: 112 VDQRTFGHVLVTAMAHSGGRPVPEPITHIAADPFEEHFDEDLFGRRLRARQTEVKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L R T +L + PK + +L+ ++V+ A+ GG Sbjct: 172 QSLISGVGNIYADEALWRARLHGARPTGALTR----PK--IAELLGAAREVMAAALSEGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + +VYG+ EPC CG I R RS++ C CQ Sbjct: 226 TSFDSLYVNVNGESGYFDRSLAVYGRRDEPC-PRCGAPIIRESFMNRSSYSCPRCQ 280 >gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E P K H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETV-PYK---HTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLPYMKAVFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P KT + + + + +I EI++ AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHP--KTPANVLDEVQLSVLRANIISEIKR----AIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|257865987|ref|ZP_05645640.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257872320|ref|ZP_05651973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] gi|257799921|gb|EEV28973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257806484|gb|EEV35306.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] Length = 280 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 155/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ N T+ +I R + P FSA +G++ RR K Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPI-FSALLKGQRFEKFERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ +L + +I HL M G + E+ + PI + +H HV T+ + ++ Y+D Sbjct: 60 FLIFKLT-DYDLISHLRMEGKY--EYFE-SDPIVD-KHTHVIFHFTDGS-----QLNYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+ Y + LGPEP F + +K LL+QK+V Sbjct: 110 VRKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVT 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW+A++ P + SL TP + L Q I VL A++AGG+++R Sbjct: 170 GLGNIYVDEALWQAEIHPEQPADSL-----TPAEANV-LHQAIIDVLERAVEAGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 224 YLNALGEAGKFQMSLNVYGQTGNPC-GRCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|172040469|ref|YP_001800183.1| hypothetical protein cur_0789 [Corynebacterium urealyticum DSM 7109] gi|238066642|sp|B1VG60|FPG_CORU7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171851773|emb|CAQ04749.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 289 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 23/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + D+ + H + +R A G +I + RR Sbjct: 1 MPELPEVEVVRRGLEEHLSDGVIHDVDVRHPRAVRAQPGGAAELVALLDGARIQSIERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY+ + L ++ VHLGMSG +I E + A P HV IS + K + + Sbjct: 61 KYMWLVLNNGRALFVHLGMSGQMLIHEASDPALPT-----THVRISARVDVGEKDLVLSF 115 Query: 117 NDPRRFGFMDLVETSLKYQ-----YP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG + P P+ + P+P + F+ + + K +++K A Sbjct: 116 VDQRTFGQWQVTPVVADPHGGFTGVPVPVAHIAPDPFEAVFDPAVVARRLRAKKTDVKRA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 +L+Q +V+GIGNIY EALW A ++P R+TR + Q + ++++ V+ A+ Sbjct: 176 ILDQTLVSGIGNIYADEALWAAGVAPSRRTRGMRQRDAV------AVLEQAGAVMRRALA 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + + YG+ G+PC CG+ I R+ RS+ +C CQ Sbjct: 230 QGGTSFDSLYVNVNGASGYFARSLNAYGRAGKPC-PRCGEPIVRVQWTNRSSHFCPQCQ 287 >gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 277 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E P K H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETV-PYK---HTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P KT + + + + +I EI++ AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHP--KTPANVLDEVQLSVLRANIISEIKR----AIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|322372544|ref|ZP_08047080.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] gi|321277586|gb|EFX54655.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] Length = 273 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVLGRTILSVEVKVPKMVKTSYQSFLNELPGQRIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLL----FTDQVPTNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F + + +K LL+QK+VAG+ Sbjct: 111 KFGTFDLLSKNQEEAYFTKKKLGPEPTKKAFKYASFERALMRSDKPIKPLLLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPAREL------SKAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|322387709|ref|ZP_08061318.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] gi|321141576|gb|EFX37072.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] Length = 288 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 143/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ +++I + + K ++ D F G+ I + RR KY Sbjct: 15 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKTDL-DEFQKEMPGQVIQTMGRRGKY 73 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + +I HL M G + + +H HV I + ++Y D Sbjct: 74 LLFYLSDKV-LISHLRMEGKYFY----YPDQVPERKHAHVLIHFEDGGT-----LVYEDV 123 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG Sbjct: 124 RKFGTMELLAPELLEAYFISKKLGPEPTEKDFDLGSFKLALKKSKKTIKSHLLDQTLVAG 183 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LWRAK+ P R + SL K+ E VL A++ GGS++R Y Sbjct: 184 LGNIYVDEVLWRAKVHPSRTSNSLTAQEAR------KVHDETINVLGQAVEKGGSTIRTY 237 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S C +I +I GR T +C CQ+ Sbjct: 238 TNAFGEDGTMQEFHQVYDKAGQAC-SRCETIIEKIQLGGRGTHFCPKCQR 286 >gi|167464952|ref|ZP_02330041.1| formamidopyrimidine-DNA glycosylase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382877|ref|ZP_08056712.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153146|gb|EFX45601.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 286 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 152/293 (51%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHR---KNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE ++R L ++V K + ++ L R K L + F+ G+ I + R Sbjct: 1 MPELPEVETVKRTLNELVVGKTIEQVEVRLSRIIQKPLNIE---EFALLLEGQTIERIDR 57 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R K+L + + ++ HL M G + + ++ P++N H HV T+ T+ + Sbjct: 58 RGKFLKF-IFTDYVLVSHLRMEGRYGVYLSN--DPVEN--HTHVLFHFTDGTDLR----- 107 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D R+FG M L + PPL LG EP D +F H K + +K LLNQ+ Sbjct: 108 YKDVRQFGTMHLFPKGQEELDPPLNKLGLEPLDETFTFERFYQTIHHKTTRIKPLLLNQE 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 + G+GNIYV EAL+ A + P +T L + L KL + I L ++D GGSS Sbjct: 168 YIVGVGNIYVDEALYTAGIHPETETHLLTKKE------LRKLHEAIVHTLQSSVDVGGSS 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ YV+ G +G FQ+ +YG+T E C + CG +I ++V GR T C CQ Sbjct: 222 IKSYVNGQGEMGMFQHQLKIYGRTSELC-TQCGGVIVKMVVGGRGTHICPTCQ 273 >gi|290957119|ref|YP_003488301.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260646645|emb|CBG69742.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 286 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/294 (30%), Positives = 155/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D+ LH + +R P F+ +G +I + RR Sbjct: 1 MPELPEVEVVRRGLARWVAHRTVADVEVLHPRAIRRHLAGPEDFAHRLKGHRIGEPGRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E ++++ HLGMSG +++ A + +H + + ++ T+ + + Sbjct: 61 KYLWLPVEDTGIAVLAHLGMSGQLLVQPHEAA----DEKHLRIRVRFADDLLTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+A +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDAEAFHQALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTAGFTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGQSGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPTCQR 280 >gi|218288810|ref|ZP_03493073.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] gi|218241168|gb|EED08344.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] Length = 285 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL +L+ + ++ HL M G + + + S P+ H HV L + + Y Sbjct: 61 LLFQLD-QVLLVSHLRMEGRYAVANPS------EPELPHTHVVFRLASGRELR-----YA 108 Query: 118 DPRRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R+FG MD V LK + P L LGPEP D + + L ++ + + +K+ LL+Q+ Sbjct: 109 DVRQFGTMDAV---LKGEPLPKGLAELGPEPFDPALDGTALHERWRGRRAPIKSMLLDQR 165 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYV EAL+ A + P L + L L++EI+ VL AI GGSS Sbjct: 166 QIAGLGNIYVDEALFAAGIHP------LTPAGAVGAEELGVLLREIRDVLARAIGEGGSS 219 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +R + G G FQ +VYG+ G+PC CG I++I AGR T C CQ Sbjct: 220 VRSFRDGYGRHGGFQIQLAVYGRAGQPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|297181411|gb|ADI17600.1| formamidopyrimidine-DNA glycosylase [uncultured delta proteobacterium HF0130_19C20] Length = 272 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + +++ + + R N ++ D F G+K V+RRAK Sbjct: 1 MPELPEVETVVRELSNEILGDSISSVDIFRNNPIVQGDL-EAFQKQLIGRKFKYVTRRAK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYN 117 YL+ L + ++ H+ M+G FI+ PI P ++N V L + +I++ Sbjct: 60 YLIFHLHPHGFMVAHMRMTGKFIV-----CDPIDMPSKYNRVWFHLKSGR-----LMIFD 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG +++ E + L LG EP N Y + +K+ LL+QKI+ Sbjct: 110 DVRCFGTLEVYENLSDSK--ALNKLGIEPFSEDLNVNYFKSKVSSSKREIKSILLDQKII 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E L+R+K+SP+R + ++ + ++I+ Q VL +AI+ G+++ Sbjct: 168 AGLGNIYVSEILFRSKISPLRTSETIRNKEWS------QIIKYTQSVLEEAIENNGTTIS 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ +D G FQ VY KT +PC +CG I+RIVQ RSTF+C CQ+ Sbjct: 222 NFRRVDEKTGKFQKFLKVYDKTEKPC-PDCGIPIQRIVQQQRSTFFCPECQQ 272 >gi|302865862|ref|YP_003834499.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315502407|ref|YP_004081294.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] gi|302568721|gb|ADL44923.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315409026|gb|ADU07143.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] Length = 285 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 147/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + + H + +R P HF+ G+ + V RR Sbjct: 1 MPELPEVETVRVGLAQWVIGRRIAAVEVRHPRAVRRHAPGGAHFADVLAGRTVTGVQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ P+ H+ + + + R + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQ------PVGAADELHLRVRFRFADDGPELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + + +P D F+ +K + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGAELPAE-IAHIARDPMDPEFSDEAFVAALRRKRTEIKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R +L + +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRAKLHGTRPADALT------RPAALRLLGHVRDVLAEAIKQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + YV+++G GYF + + YG+ GEPC CG IRR RS++ C CQ Sbjct: 226 ELYVNVNGESGYFDRSLNAYGREGEPC-PRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|295836306|ref|ZP_06823239.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295825948|gb|EFG64563.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 284 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 154/295 (52%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV LH +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + L+G +++ HLGMSG +++ H + A+ +H + I + T+ + Sbjct: 61 KYLWLPLDGAGEAVLAHLGMSGQLLVQPHAAPAE-----KHLRLRIGFDDALGTE---LR 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L ET + + +P D F+ +K + +K ALL+Q Sbjct: 113 FVDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTAIKRALLDQS 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +++G+GNIY EALWRA+L R T SL + P+ +L+ ++ V+ A+ GG+S Sbjct: 173 LISGVGNIYADEALWRARLHYDRPTASLTR----PR--TDELLGHVRDVMNAALAVGGTS 226 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG IRR RS++YC CQ+ Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPIRRDAWMNRSSYYCPKCQR 280 >gi|307709150|ref|ZP_07645609.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] gi|307620096|gb|EFN99213.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] Length = 274 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR L ++ ++ I + + K ++ D F G+ I + RR KY Sbjct: 1 MPELPEVETIRRGLEKLILGKKISSIEIRYPKMIKTDL-DEFQKEVPGQIIESMERRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFQFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP+ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFISKKLGPEPSKQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|307704700|ref|ZP_07641599.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] gi|307621747|gb|EFO00785.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] Length = 274 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 148/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ + + + K ++ D + F G+ I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEIRYPKMIKTDL-NEFQKELPGQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPYQVPERKHAHVFFQFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFISKKLGPEPSEQDFDVQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKAGQECV-RCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378] Length = 273 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVTK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R +L + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVHPERAANTLSDKE------INRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTGEPCVI-CGTPIEKIKLNGRGTHFCPHCQK 273 >gi|300113180|ref|YP_003759755.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] gi|299539117|gb|ADJ27434.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] Length = 271 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLFLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II HLGMSGS + T+ P K H+H+ I L + + +NDPR Sbjct: 61 LLNCTQG-TIIFHLGMSGSLRLV-TNNTPPAK---HDHLDILLNSGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP ++ F+ YL + + +K ++N +IV GI Sbjct: 111 RFGSVSWTQAN-PVHHPLLEILGPEPLESLFDGHYLFKHSRHRRAPVKVFIMNHRIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + G + +L I+ VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHPRRSAGRI----GLAR--YQRLADTIKTVLDNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +Y + PC CG IR R+++YC CQ Sbjct: 224 TSDGKPGYFVHQLQIYNRNAHPC-PVCGTPIRLERIGQRASYYCPRCQ 270 >gi|218662133|ref|ZP_03518063.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli IE4771] Length = 176 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 78/164 (47%), Positives = 103/164 (62%), Gaps = 10/164 (6%) Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTISLT 104 + RRAKYLL++L+ ++I HLGMSGSF IE + ++ K+ +H+HV L Sbjct: 15 LGRRAKYLLVDLDDGNTLISHLGMSGSFRIEEGAVSETPGEFHHARSKDEKHDHVIFHLE 74 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K Sbjct: 75 GGGGPR--RVVYNDPRRFGFMDIVGRADLAAHPFFRDLGPEPTGNELGATYLAERFRDKA 132 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 LK+ALL+QK +AG+GNIYVCEALWR+ LSPIR +L+ G Sbjct: 133 QPLKSALLDQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGG 176 >gi|120612253|ref|YP_971931.1| formamidopyrimidine-DNA glycosylase [Acidovorax citrulli AAC00-1] gi|120590717|gb|ABM34157.1| DNA-(apurinic or apyrimidinic site) lyase [Acidovorax citrulli AAC00-1] Length = 271 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + L K+LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIADAVAGAVIESVVLG-KSLRWPL-GRAPEDLHGLRVVAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ + +++HLGMSGS + ++ A H+H ++ + T K DPR Sbjct: 59 LLDLDRGM-LLIHLGMSGSLRFDRSADAPG----AHDHFLMATSRGTLRLK------DPR 107 Query: 121 RFGFMDLVETSLKYQYPPL-RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + ++ Q L LG EP ++F +K LL + V G Sbjct: 108 RFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTARASSIGPLRAR------RLHEAIRAVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 222 AGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|332687081|ref|YP_004456855.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] gi|332371090|dbj|BAK22046.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] Length = 274 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ L + + F G+KI + RR K+ Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLWSRIIEQPEVETFQKQLIGQKIKRIDRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + E PI +H HV + ++++ + Y D Sbjct: 61 LIFKLT-NWDLISHLRMEGKY--ETHQKDDPIT--KHTHVIFTFSDDSQLR-----YLDI 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L+ +Y + LGPEP +F+ K + +K LL QK+V G Sbjct: 111 RKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + + +L + I +L A+ AGG+++R Y Sbjct: 171 LGNIYVDEALWTAKIHPEKPANTLSVSE------VNRLHKAIIDILTQAVKAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+ +PC + C I++I A R T +C +CQK Sbjct: 225 LNALGEAGTFQLALNVYGQKDKPC-ACCATPIQKIKVAQRGTHFCPHCQK 273 >gi|323699537|ref|ZP_08111449.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. ND132] gi|323459469|gb|EGB15334.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans ND132] Length = 272 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L + T+ + + + G+ I V RRAK L Sbjct: 1 MPELPEVEVIARGLDASVTGRTIESVEVPGLTRLSEPEETLVPKVLGRTITHVRRRAKVL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ HL M+G + A+ +H+ + L + + + + D R Sbjct: 61 LVELDNGSTLAFHLKMTGRVVHGPKRAAQ-----RHDRILFHLDDGSM-----LYFADMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG++ + L GPEP + + A L + +N +K LLNQ +VAG+ Sbjct: 111 KFGYVRCFAADELDCWDFLCKAGPEPLETAPEA--LAERVTGRNCAIKALLLNQSVVAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA ++P +TR + +D +L +Q VL AI GSS+ DYV Sbjct: 169 GNIYADESLFRAGINP--ETR----GSRVGRDRAVRLFTALQAVLRQAIAENGSSISDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQN+F+VYG+ GEPC + CG+ +R + AGR++ +C CQ+ Sbjct: 223 NAHGDAGAFQNSFNVYGRKGEPCRA-CGETLRAVTVAGRTSTFCPRCQR 270 >gi|306829344|ref|ZP_07462534.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] gi|304428430|gb|EFM31520.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] Length = 274 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ K ++ DI + K ++ D F G+ I + RR K Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVDI-RYPKMIKTDL-EEFQKELAGQVIESMGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L + +I HL M G + + + +H HV + ++Y D Sbjct: 59 YLLYYLTDKV-LISHLRMEGKYFY----YSDQVPERKHAHVFFHFEDGGT-----LVYED 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VA Sbjct: 109 VRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQSFQAALAKSKKPIKSHLLDQTLVA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Sbjct: 169 GLGNIYVDEVLWRAQVHPARPSQTLTAEEASA------IHDQTIAVLGQAVEKGGSTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 223 YTNAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|88859719|ref|ZP_01134359.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] gi|88818736|gb|EAR28551.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] Length = 271 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 146/294 (49%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ + +H LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMLLKTIRTVRVHHWQLRWPVPKEMEQLA-GQTITAIERRAKYL 59 Query: 61 -LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ G ++I+HLGMSG+ I K + +H+H+ I L + + NDP Sbjct: 60 QLVTPIG--TVILHLGMSGNLRI----VDKAVALKKHDHIEIELESGLVLR-----LNDP 108 Query: 120 RRFGFMDLVETSLKYQYPP-----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 RRFG + +Q P LGPEP ++FN L Q K + +K +++ Sbjct: 109 RRFG-------ACLWQAPGETHSVFAKLGPEPLTDAFNPEQLFEQAKNKKTAIKQFIMDN 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K V G+GNIY EAL++AK+ P L + L+ I++ L AI GG+ Sbjct: 162 KFVVGVGNIYANEALFKAKIHPQTPAGQLQLAD------FVALVPIIKQTLAQAITQGGT 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +L+D+ DG GYF VYG+ G+PC+ C ++ I RST +C CQ Sbjct: 216 TLKDFAQTDGKPGYFAQELQVYGRKGKPCV-QCDTVLLEIRLGQRSTVFCPSCQ 268 >gi|93117329|gb|ABE99582.1| fpg [Neisseria meningitidis H44/76] Length = 250 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 139/254 (54%), Gaps = 14/254 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ TV + L + LR+ G++++ RRAKYLLI + + +++HLGMS Sbjct: 5 IEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQTGV-LLIHLGMS 63 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS I S + + +H+HV I ++ T + Y DPR+FG + E ++ +P Sbjct: 64 GSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GIEEHHP 117 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L LGPEP +F A YL + + +K AL++ +V G+GNIY E+L+RA +SP Sbjct: 118 LLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAGISPH 177 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG Sbjct: 178 RPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYG 231 Query: 258 KTGEPCLSNCGQMI 271 + +PC CG ++ Sbjct: 232 RHNQPC-PRCGGLV 244 >gi|300173771|ref|YP_003772937.1| formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] gi|299888150|emb|CBL92118.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] Length = 287 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L L F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIVGGQITQVHLLYPKLINGDSQAFITGVTNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E +P K H + L + + RV YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVESIE-TRPYK---HTEIIFELLD-----QRRVFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + P L LGPEP + Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVDIFSRSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T++L L L + I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTKTLTVRE------LSLLRENIIAEMKRAIAHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTTMVKIKVGQRGTTFCPACQ 273 >gi|46907795|ref|YP_014184.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47093101|ref|ZP_00230878.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] gi|67460686|sp|Q71ZA3|FPG_LISMF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46881064|gb|AAT04361.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47018541|gb|EAL09297.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] Length = 273 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGKPIEKIKLNGRGTHFCPNCQK 273 >gi|145637250|ref|ZP_01792911.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269502|gb|EDK09444.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 251 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 142/270 (52%), Gaps = 22/270 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEEL-ITLKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I E II HLGMSGS I+ S +H+H+ I + N + YNDP Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID-----KHDHIDIVMNNGKLLR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG E + LGPEP + FNA YL + +K++ LK L++ +V G Sbjct: 109 RRFGAWLWTENLDDFHL--FLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D+ Sbjct: 167 VGNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 + DG GYF VYG +PC CG+ Sbjct: 221 LQPDGRPGYFAQELLVYGNKDKPC-PKCGR 249 >gi|322419618|ref|YP_004198841.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] gi|320126005|gb|ADW13565.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] Length = 270 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 144/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I V RR KYL Sbjct: 1 MPELPEVEVTRLGITSHLTGARIAALSVHSPKLRAMVPAGLAGLLAGETIRCVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ S+++HLGM+G ++ TS P H+H + L + + ND Sbjct: 61 ILTCASG-SLLLHLGMTGHLRLVPATSAPGP-----HDHFDLRLESGLTLR-----LNDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + Q+ L+ +GPEP +FNA L + L+ L++ +VAG Sbjct: 110 RRFGSIHFTAAD-PLQHRLLKKIGPEPLTAAFNAEGLYRLSRNRKVALQRFLMDSAVVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+R +L P SL + T +L+ I++ L D+I AG SS+ D+ Sbjct: 169 IGNIYAAESLFRCRLFPETPAGSLTLADCT------RLVDAIKETLSDSIAAGRSSM-DF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + YF VYG+ GEPC CG IRR RSTF+C CQ+ Sbjct: 222 RRQEERLAYFPQELYVYGREGEPC-RECGSPIRRGRLGNRSTFFCAACQR 270 >gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] Length = 281 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 153/300 (51%), Gaps = 30/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR---GKKIIDVSRRA 57 MPELPEVE I R L + VT + + + P +A + G+ I V RRA Sbjct: 1 MPELPEVETIARALAPGLTGRAVTGLVVPDPKV-LAGPRTKAAFAKNLVGRPITTVDRRA 59 Query: 58 KYLLI------ELEGNLSIIV--HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K LL+ E+ G+ + ++ HL M+G F I S P+ P+ + + L + Sbjct: 60 KLLLVRLGPRPEVAGDAAAVLAFHLKMTGRFHI--ASADAPV--PERARLLVDLNDGQA- 114 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++++D RRFG L + +LGPEP D + A T ++++ +K Sbjct: 115 ----LVFSDLRRFGTARLFSPEGLAAWDFYASLGPEPWDMTPEA--FTTALSRRSTRIKA 168 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++AGIGNIY E+L A + P + + + KL+ IQ V+ AI Sbjct: 169 VLLDQTVIAGIGNIYADESLHAAGIHPETRAGDISPSRAE------KLLAAIQAVIARAI 222 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGS++RDY DG G FQN F+VYGK GEPC +CG + + AGR++ +C CQK Sbjct: 223 AAGGSTIRDYRTPDGVEGGFQNEFAVYGKAGEPC-PDCGTKLVAVKVAGRTSTFCPTCQK 281 >gi|187477042|ref|YP_785066.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] gi|123514466|sp|Q2KYB7|FPG_BORA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115421628|emb|CAJ48138.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] Length = 275 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 144/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P + + ++ RR KYL Sbjct: 1 MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + I VHLGMSGS A +H+HV + + +DPR Sbjct: 61 LLRFEHGVQI-VHLGMSGSL----RRVAMDEAPRKHDHVDWVFDHAI------LRLHDPR 109 Query: 121 RFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L LG EP D F+ +L F K +K ALL V Sbjct: 110 RFGAVLWHPNTDGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+RA + P R+ P+ +L Q ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASECLFRAGIDP----RTPAGKLSRPR--CERLAQAVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G C CG IRR+VQ R+T++C +CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLAC-RVCGTPIRRLVQGQRATYFCPHCQK 274 >gi|307706468|ref|ZP_07643277.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] gi|307618178|gb|EFN97336.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] Length = 274 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ I + + K ++ D F G+ + + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDL-DQFQKELPGQVVESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + + HL M G + P + P+ H I ++Y D Sbjct: 60 LLFYLTDKV-LTSHLRMEGKYFY------YPDQVPERKHAHIFFQFEDGGT---LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG Sbjct: 110 RKFGTMELLAPDLLDAYFISKKLGPEPREQDFDVQVFQAALTKSKKPIKSHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LWRA++ P R +++L T + +I VL A++ GGS++R Y Sbjct: 170 LGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQIIAVLGQAVEKGGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 224 TNAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|93117321|gb|ABE99578.1| fpg [Neisseria meningitidis] Length = 258 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 143/270 (52%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|322411307|gb|EFY02215.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 275 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + N+ F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPNMVKSDLRIFLQILPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 MFDF-GQTVLVSHLRMEGKYLL----FPDEVPEQKHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLPDFFAQRKLGPEPRKETFKLKPFEVALQSSKKRIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL K + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSL------KKAEIKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|325690758|gb|EGD32759.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK115] Length = 274 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G + +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTGGV-LISHLRMEGKYLFYPDA----VPERTHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAEAK------RLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-ARCSSPIEKIKLGGRGTHLCPHCQK 272 >gi|325283264|ref|YP_004255805.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] gi|324315073|gb|ADY26188.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] Length = 271 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 44/300 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF--SAATRGKKIIDVSRRAK 58 MPELPEVE RR + ++ T+ DI R P + + G+ +++ RR K Sbjct: 1 MPELPEVETTRRKIAPLVTGRTIVDI-------RHLSPKKYPDTGLAHGRTVLEPQRRGK 53 Query: 59 YLLIEL-EG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL++ L +G + +IVHLGM+G F +E H +T+ L + Sbjct: 54 YLILPLAQGPDAAPDRELIVHLGMTGGFRLEEGP---------HTRLTLQLDSG------ 98 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + +NDPRRFG + +V+ P L +GPEP ++SF + Q K +K LL Sbjct: 99 ELHFNDPRRFGRVRVVQAGDYAALPTLAAMGPEPLEDSFE-LEAFAQAAAKAGAVKPWLL 157 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIY EALWRA++ P ++ S Q +L +++V+ +A++ G Sbjct: 158 SQRPVAGVGNIYADEALWRARIHPAQRHLSAEQAA--------RLHAAVREVMREAVELG 209 Query: 233 GSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL +Y DG G FQ + YG+ G+PC CG I + V R T +C CQ Sbjct: 210 GSSLGNGVSNYRQHDGDWGGFQLQHAAYGRGGQPC-PRCGTTIEKTVLGQRGTHFCPQCQ 268 >gi|16803604|ref|NP_465089.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes EGD-e] gi|224501496|ref|ZP_03669803.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-561] gi|284801955|ref|YP_003413820.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284995097|ref|YP_003416865.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] gi|21362541|sp|Q8Y6W7|FPG_LISMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16410993|emb|CAC99642.1| mutM [Listeria monocytogenes EGD-e] gi|284057517|gb|ADB68458.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284060564|gb|ADB71503.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] Length = 273 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + K+I ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSL-----SDKEI-KRIFKATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +QN VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQNKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|315303333|ref|ZP_07873959.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] gi|313628294|gb|EFR96801.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] Length = 273 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + +H K ++ P F G+++ V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKINQVIVHVPKMIKNTPPDEFVHMLVGQEMEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNET----DEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + K+I L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSL-----SNKEIKL-LFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGK GEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKIGEPCVI-CGTQIEKIKLNGRGTHFCPNCQK 273 >gi|15805520|ref|NP_294216.1| formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] gi|6458179|gb|AAF10070.1|AE001908_5 formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] Length = 291 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 149/303 (49%), Gaps = 46/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEVE RR + +++ T+ I D PH + R G+++ ++RR K Sbjct: 12 MPELPEVETTRRKIEPLLRGKTIERIV-------HDAPHRYRNTERAHGRQVRGLTRRGK 64 Query: 59 YLLI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 YLL+ + +L +IVHLGM+G F +E H VT L + Sbjct: 65 YLLLHLAAADAAEDEPHDLELIVHLGMTGGFRLEEGP---------HTRVTFELGSGE-- 113 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ +NDPRRFG + V P L +GPEP + F + +K Sbjct: 114 ---KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFV-ALAARCGPVKP 169 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+QK V+G+GNIY E+LW A+L P +TR G +L + I++V+ A+ Sbjct: 170 WLLSQKPVSGVGNIYADESLWHARLHPA-QTRLNADEAG-------RLYRAIREVMAAAV 221 Query: 230 DAGGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 D GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C Sbjct: 222 DKGGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPC-DRCGTPIEKIVLGQRGTHFCP 280 Query: 286 YCQ 288 CQ Sbjct: 281 VCQ 283 >gi|114567528|ref|YP_754682.1| DNA-formamidopyrimidine glycosylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317553|sp|Q0AVE3|FPG_SYNWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114338463|gb|ABI69311.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 268 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 25/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ NL ++ + + ++ + R+++ + T G+ I + SRR KYL Sbjct: 1 MPELPEVETIKNNLQEILP-LRIKELEIRREDILRCRDYALEELT-GQIIEEASRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ ++ L ++ HLGMSG I E T+ +P H HV I L K+ +++Y D Sbjct: 59 ILAVDNGLFLVFHLGMSGRLYIQEEETTVLEP-----HVHVIIHLD-----KRLKLLYQD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + L++ + + LG EP F YL + + +KN LLNQ +++ Sbjct: 109 ARRFGGLWLLKDTQCF----FSRLGKEPLSEEFCPRYLEQVLQGRQTAIKNLLLNQNLIS 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ A + P R+ SL + ++I L I++VL +I G++ RD Sbjct: 165 GIGNIYADEALFMAGIRPDRQAASL-----SVREI-EGLCCGIKEVLAKSIKYRGTTFRD 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G FQN VYG+ + C NCGQ ++R GRS+ YC CQ+ Sbjct: 219 YRDGKRQPGEFQNHLQVYGRFNQAC-PNCGQPLKRSRIGGRSSHYCEKCQQ 268 >gi|284992410|ref|YP_003410964.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] gi|284065655|gb|ADB76593.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] Length = 292 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 30/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----RKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L + +V + +H R++L + HF AA G+ + R Sbjct: 1 MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHL--EGAEHFVAALTGRTLTAAHR 58 Query: 56 RAKYLLIEL-EGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 R KYL + L EG+ +++ HLGMSG ++E KP + P H+ T Sbjct: 59 RGKYLWLPLAEGDGTPAGQALVAHLGMSGQLLVE-----KPTQ-PDETHLRARFTFTDGG 112 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 ++ R + D R FG + + +T PP + + +P D +F+ + + ++ + +K Sbjct: 113 RELRFV--DQRTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTEVK 170 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q ++ G+GNIY E+LWRA+L R T L + + L++ ++ VL ++ Sbjct: 171 RALLDQTLIGGVGNIYADESLWRARLHGNRPTDRLTRAQ------VGALLEGVRDVLHES 224 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV ++G GYF +VYG+ PC CG I R RS++ C C Sbjct: 225 LAQGGTSFDSLYVDVNGQSGYFSRHLAVYGQADRPC-PRCGTPIVRESFMNRSSYSCPQC 283 Query: 288 Q 288 Q Sbjct: 284 Q 284 >gi|223940228|ref|ZP_03632088.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] gi|223891115|gb|EEF57616.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] Length = 284 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 110/308 (35%), Positives = 147/308 (47%), Gaps = 44/308 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEI+ R+L ++ N +TD+ + R K L A G + +SRR KY Sbjct: 1 MPELPEVEILVRHLAPLITNKKITDVEIRRSKVLAPTTASDLEEALTGARFTHLSRRGKY 60 Query: 60 LLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 LL L+ L ++ HLGM+G + K P+H V + L R Sbjct: 61 LLFFLKSPRMQCPLQLLGHLGMTGRMYL----LPKNAGLPKHAAVILGLGRE------RF 110 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++ D R FG L SL LGPEP F Y H + +K LL+Q Sbjct: 111 VFEDTRYFGRFTLDTRSLA-------ALGPEPWSPEFTDEYFHHALKRSTQPVKVKLLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGG 233 +VAG+GNIY EAL+RA +SP +R + K I K L + IQ+VL AI G Sbjct: 164 SLVAGVGNIYASEALYRAGISPKLSSRKI-------KPIQAKHLRKAIQEVLEQAIQCGS 216 Query: 234 SSLRDYVHIDGSIGYF------------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + D+V I+G G+F Q VY + G+ C CG I+R VQA RST Sbjct: 217 TLPLDFVGIEGKNGHFYYGSAGDSSEFYQERLLVYDRLGQSC-GKCGAGIKRFVQAARST 275 Query: 282 FYCTYCQK 289 FYC CQ+ Sbjct: 276 FYCPRCQR 283 >gi|311696384|gb|ADP99257.1| formamidopyrimidine-DNA glycosylase [marine bacterium HP15] Length = 245 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 142/258 (55%), Gaps = 19/258 (7%) Query: 32 NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 +LR+ P G+ I V RRAKYL + ++ ++IVHLGMSGS I T P+ Sbjct: 7 SLRWPVPADLGEKLEGQVIKSVDRRAKYLFLNMDRG-TVIVHLGMSGSLRII-TDNTPPL 64 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 H+H+ ++L + + +NDPRRFG +++ ++P + LGPEP F Sbjct: 65 ---THDHIDVALQSGVILR-----FNDPRRFGCWLWADSA--EEHPLITHLGPEPLAPEF 114 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 N +L KN+ +K+ +++ ++V G GNIY EAL+++ + P RK + Sbjct: 115 NGAHLFRLSRGKNTPVKSFIMDNQVVVGAGNIYANEALFKSGIHPRRKAGRI------SL 168 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 D ++L + I++ L AI GG++LRD+V+ DG GYF + VYG+ G+PC CG + Sbjct: 169 DRYHRLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGRGGQPC-KECGAPL 227 Query: 272 RRIVQAGRSTFYCTYCQK 289 + I RST YC CQ+ Sbjct: 228 KEIRMNNRSTVYCPRCQR 245 >gi|306831910|ref|ZP_07465065.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425836|gb|EFM28953.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 296 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F G+ ++ RR K Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVP-KIVKTDLVA-FETEILGQTFQNIGRRGK 81 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L + II HL M G +++ + + + +H HV L + + ++Y D Sbjct: 82 YLLLMLNKQV-IISHLRMEGKYLL----FPEQVPDNKHFHVLFQLDDGST-----LVYQD 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V Sbjct: 132 VRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVV 191 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Sbjct: 192 GLGNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGISKGGTTIRT 245 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 246 YHNAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|226224165|ref|YP_002758272.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Clip81459] gi|225876627|emb|CAS05336.1| Putative formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 273 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|313633102|gb|EFS00002.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067] gi|313637952|gb|EFS03260.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171] Length = 273 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNET----DEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + K+I L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSL-----SNKEIKL-LFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGKTGEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKTGEPCVI-CGTQIEKIKLNGRGTHFCPNCQK 273 >gi|94970892|ref|YP_592940.1| formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94552942|gb|ABF42866.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 272 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 158/295 (53%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L T+ + + K + G KI V R K+ Sbjct: 1 MPELPEVETVANGLNKRAAGTTIESVWIGEKKQPLKSSARAIAKMLEGAKITLVRRVGKH 60 Query: 60 LLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ +L E I+HLGM+GS ++ P+ P+H H+ L++ K+ R Sbjct: 61 IVADLAEPDGEPRGQWIIHLGMTGSTLVVDPDT--PL--PKHTHLIAKLSSG---KELRF 113 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + DPR FG + + S + P G EP S F +N+ +K+ALLNQ Sbjct: 114 V--DPRMFGKLAVRAKSDVFAAP-----GLEPLTVSLED--FQKLFRGRNTPIKSALLNQ 164 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EAL+RA + P R+ +SL + + L +L +++ +VL +A++ GGS Sbjct: 165 ALLSGVGNIYADEALFRAGIRPRRRAKSLSRAD------LTRLHEKVGEVLREAVELGGS 218 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+ DYV +G+ G+FQ +VY +TGEPC + C + I+R+V AGRS+ YC CQK Sbjct: 219 SVNDYVDAEGNEGFFQLRHNVYQRTGEPCFT-CKKPIKRVVIAGRSSHYCQNCQK 272 >gi|55820699|ref|YP_139141.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116627506|ref|YP_820125.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMD-9] gi|81676735|sp|Q5M576|FPG_STRT2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55736684|gb|AAV60326.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116100783|gb|ABJ65929.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Streptococcus thermophilus LMD-9] gi|312278025|gb|ADQ62682.1| Formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus ND03] Length = 273 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIIISHLRMEGKYLL----FTDQVPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P N K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPA------NKLSKAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|55822590|ref|YP_141031.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] gi|81676585|sp|Q5M0P0|FPG_STRT1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55738575|gb|AAV62216.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] Length = 273 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIIISHLRMEGKYLL----FTDQVPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKELGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P N K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPA------NKLSKAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|24211712|sp|Q9RX22|FPG_DEIRA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 280 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 149/303 (49%), Gaps = 46/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEVE RR + +++ T+ I D PH + R G+++ ++RR K Sbjct: 1 MPELPEVETTRRKIEPLLRGKTIERIV-------HDAPHRYRNTERAHGRQVRGLTRRGK 53 Query: 59 YLLI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 YLL+ + +L +IVHLGM+G F +E H VT L + Sbjct: 54 YLLLHLAAADAAEDEPHDLELIVHLGMTGGFRLEEGP---------HTRVTFELGSGE-- 102 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ +NDPRRFG + V P L +GPEP + F + +K Sbjct: 103 ---KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFV-ALAARCGPVKP 158 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+QK V+G+GNIY E+LW A+L P +TR G +L + I++V+ A+ Sbjct: 159 WLLSQKPVSGVGNIYADESLWHARLHPA-QTRLNADEAG-------RLYRAIREVMAAAV 210 Query: 230 DAGGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 D GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C Sbjct: 211 DKGGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPC-DRCGTPIEKIVLGQRGTHFCP 269 Query: 286 YCQ 288 CQ Sbjct: 270 VCQ 272 >gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATR--GKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ LH + +R P A R G+ ++ RR Sbjct: 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE +++I+VHLGMSG +++ + + + +H + L + + + + Sbjct: 61 KYLWLVLEPSSVAIVVHLGMSGQMLVQDPT----VPDEKHLRIRARLESGIDLR-----F 111 Query: 117 NDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV + + +P D F+ + K++ +K ALL+ Sbjct: 112 VDQRTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHTEIKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+G+GNIY EALWRA++ R T L P+ L L+ + V+ +A+D GG Sbjct: 172 QTVVSGVGNIYADEALWRAEIHGNRPTDKL----SGPR--LRVLLDAARDVMTEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ PC CG IRR RS++ C CQ Sbjct: 226 TSFDALYVNVNGQSGYFDRSLNAYGQENLPC-RRCGAPIRREKFMNRSSYSCPKCQ 280 >gi|288905821|ref|YP_003431043.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] gi|288732547|emb|CBI14119.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] Length = 273 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F G+ ++ RR K Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVP-KIVKTDLVS-FETEILGQTFQNIGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L + II HL M G +++ + + + +H HV L + + ++Y D Sbjct: 59 YLLLMLNKQV-IISHLRMEGKYLL----FPEQVPDNKHFHVLFQLDDGST-----LVYQD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V Sbjct: 109 IRKFGTMELLYPNQIEAYFQKKNLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Sbjct: 169 GLGNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 223 YHNAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|306834024|ref|ZP_07467145.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] gi|304423812|gb|EFM26957.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] Length = 296 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F G+ ++ RR K Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVP-KIVKTDLVA-FETGILGQTFQNIGRRGK 81 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L + II HL M G +++ + + + +H HV L + + ++Y D Sbjct: 82 YLLLMLNKQV-IISHLRMEGKYLL----FPEQVPDNKHFHVLFQLDDGST-----LVYQD 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V Sbjct: 132 VRKFGTMELLYLNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVV 191 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Sbjct: 192 GLGNIYVDEALWAAKIHPERVSSSLTDSE------IALLHDEIIQILQLGIVKGGTTIRT 245 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 246 YHNAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|254383290|ref|ZP_04998643.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] gi|194342188|gb|EDX23154.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] Length = 286 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 153/295 (51%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH---HFSAATRGKKIIDVSRR 56 MPELPEVE++RR L + T+ D+ LH + +R P F+A RG+ + RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVR-RHPAGGVDFAARLRGETVGVPQRR 59 Query: 57 AKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + L G +LS++ HLGMSG +++ P P H+ I + + + + Sbjct: 60 GKYLWLPLAGRDLSVLGHLGMSGQLLVQ------PADAPDEKHLRIRVRFD-DAAGTELR 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + + + + +P D F+ K S +K ALL+Q Sbjct: 113 FVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRALLDQS 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +++G+GNIY EALWRA+L R T +L + + +L+ ++ V+ A+ GG+S Sbjct: 173 LISGVGNIYADEALWRARLHYERPTATLT------RPLSAELLGHVRDVMNAALAVGGTS 226 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 227 FDSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|93117325|gb|ABE99580.1| fpg [Neisseria meningitidis] Length = 255 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/264 (34%), Positives = 141/264 (53%), Gaps = 14/264 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ TV + L + LR+ G++++ RRAKYL++ + + +++HLGMS Sbjct: 6 IEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LLIHLGMS 64 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS I S + K +H+HV I ++ T + Y DPR+FG + E ++ +P Sbjct: 65 GSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GIEEHHP 118 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+RA +SP Sbjct: 119 LLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFRAGISPH 178 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG Sbjct: 179 RPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYG 232 Query: 258 KTGEPCLSNCGQMIRRIVQAGRST 281 + +PC CG ++ + R T Sbjct: 233 RHNQPC-PQCGGLVVKETLGQRGT 255 >gi|331266547|ref|YP_004326177.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] gi|326683219|emb|CBZ00837.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] Length = 274 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 145/292 (49%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ I + + K ++ D F G+ I V RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDL-DEFQREVPGQVIESVGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L N +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLT-NKVLISHLRMEGKYFY------YPDQVPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFISKKLGPEPKEQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAAEAS------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C S CG +I + GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKAGQAC-SRCGTLIEKFQLGGRGTHFCPQCQR 272 >gi|325978855|ref|YP_004288571.1| formamidopyrimidine-DNA glycolase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178783|emb|CBZ48827.1| fpg [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 273 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++V + + D+ + K ++ D F G+ ++ RR K Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVP-KIVKTDLVS-FETEILGQTFQNIGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L + II HL M G +++ + + + +H HV L + + ++Y D Sbjct: 59 YLLLMLNKQV-IISHLRMEGKYLL----FPEQVPDNKHFHVLFQLDDGST-----LVYQD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V Sbjct: 109 IRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Sbjct: 169 GLGNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 223 YHNAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 276 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 146/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + N+T+ D + N+ + P F A +GK I R KY Sbjct: 1 MPELPEVETVVRTLEHQLGNVTIKDCHVLWDNIIAYPTPQTFCAQIKGKTIQHYERYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L G++ I H+ M G F I+ + +P +H HV L + + Y+D Sbjct: 61 LLFDL-GSMMWIAHMRMEGKFYIQKSD--EPYD--KHVHVLFDLQDGRQLR-----YHDT 110 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L E +QYP + +G + D YL H HK+ LK ALL+Q ++A Sbjct: 111 RKFGKMYLYEKRKDIHQYPCFQNIGLDAFDERLTPTYLYHALHKRKIVLKAALLDQSVIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + + P K L + + +L+QE +++L AI GG+++R Sbjct: 171 GIGNIYADEICFALGMHPETKIYHLRKKD------FERLLQETRRILQGAIRYGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C C I++I A R T YC CQ+ Sbjct: 225 YTSSLGVDGRFQLKLKVHAKKGEKC-PVCQGEIKKITVATRGTCYCPTCQR 274 >gi|227530467|ref|ZP_03960516.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] gi|227349572|gb|EEJ39863.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] Length = 280 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I +H + F + G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAGRKINGIDVHYGKTITNDVEQFRQSLIGQTIETVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYND 118 L +L+++ HL M GS+ +P+ P +H HV T+ T + Y D Sbjct: 61 LFRFSNHLTMVSHLRMEGSYY------TQPVDAPIDKHTHVVFKFTDGTE-----LCYRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV+T + L+T+GPEP F Y + +K LLNQ+ +A Sbjct: 110 TRKFGRMTLVKTGDEMTVGGLKTIGPEPTAADFKIDYFKRILQRSRGKIKPFLLNQRHIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LW +K++P + +L + + +IQE+ + AI+ G+++ Sbjct: 170 GLGNIYVDEVLWMSKINPEQPANTLTDKQ--IQTLHDNIIQELSR----AIEYKGTTVHT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ + YG G+ C CG + +I R T +C +CQ Sbjct: 224 FKNAFGDAGAFQEQLNAYGHGGDLC-PRCGTKMVKIKVNQRGTTFCPHCQ 272 >gi|326382853|ref|ZP_08204543.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326198443|gb|EGD55627.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 295 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 +PELPEVE IR L + +V D+ LH + R P S RGK+ RR Sbjct: 3 VPELPEVETIRLGLSAHLSGRSVRDVEVLHPRAARRHVGGPIDLSNRLRGKRFEGAERRG 62 Query: 58 KYLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KY+ + + ++++VHLGMSG +I P+ H + + L + + Sbjct: 63 KYMWLLASDSADEVAVVVHLGMSGQMLIAEQGAEDPV----HLRIRVPLDDGHELR---- 114 Query: 115 IYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG DLV+T + + + P+P +++F+ + ++++ +K A+ Sbjct: 115 -FVDQRTFGGWHLDDLVDTGPRRLPESVAHIAPDPFEDAFDRGAVIDSLRRRDTEIKRAI 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY E+LWRA+L R+TR G P+ L L+ +V+ +AI Sbjct: 174 LDQTVISGVGNIYADESLWRAELHGRRRTR------GIPRARLGDLVDHATQVMGEAIKV 227 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S D YV+++G GYF+ + + YG+ G C M+R RS+F+C CQ+ Sbjct: 228 GGTSFDDLYVNVNGQSGYFERSLNAYGREGLLCRRCETPMVREAFM-NRSSFFCPTCQR 285 >gi|68536282|ref|YP_250987.1| formamidopyrimidine-DNA glycosylase [Corynebacterium jeikeium K411] gi|90101301|sp|Q4JUY8|FPG_CORJK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68263881|emb|CAI37369.1| mutM [Corynebacterium jeikeium K411] Length = 288 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 37/307 (12%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE++RR L +V + T +C H + +R P ++ R + V RR K Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVC-HPRAVRSGEPEVLVSSLRDATVTAVKRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP--IKNPQHNHVTISLTNNTNTKKYRVIY 116 +L ++ + + VHLGMSG ++ A+P +++P H + L++ + + Sbjct: 60 FLWLDFGEDFLLQVHLGMSGQMLV-----AEPGQVQSP-HVRIRAGLSDGRE-----LCF 108 Query: 117 NDPRRFGFMDL-------------VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 D R FG L V + + + + +P + F+A + K Sbjct: 109 VDQRTFGEWRLEKAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMKSK 168 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LLNQ++V+GIGNIY EAL+ A + P R++ +L+ + L++++Q + Sbjct: 169 RAAVKTVLLNQEVVSGIGNIYADEALFLAGVRP-RRSAALLS-----RPTLHRVLQSAAE 222 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ A++ GG+S YV+++G+ GYF + +VYG+ GEPC CG I+R+V GRST Sbjct: 223 VMECALEQGGTSFDSLYVNVNGASGYFSRSLNVYGRGGEPC-KRCGAPIKRVVVGGRSTH 281 Query: 283 YCTYCQK 289 YC CQ+ Sbjct: 282 YCATCQR 288 >gi|254824377|ref|ZP_05229378.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] gi|293593612|gb|EFG01373.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] Length = 273 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGKPIEKIKLNGRGTHFCPNCQK 273 >gi|93117333|gb|ABE99584.1| fpg [Neisseria meningitidis] Length = 249 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 140/260 (53%), Gaps = 14/260 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + + ++ Sbjct: 1 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LL 59 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 60 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 114 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 AGISPHRPANRL------KKKECALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 227 Query: 252 AFSVYGKTGEPCLSNCGQMI 271 ++VYG+ +PC CG ++ Sbjct: 228 EYTVYGRHNQPC-PQCGGLV 246 >gi|323126769|gb|ADX24066.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 275 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 VFDF-GQTVLVSHLRMEGKYLL----FPDEVPEQKHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL K + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERPSFSL------KKAEIKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC S CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPCPS-CGQAISKLKVGGRGTHICPKCQK 272 >gi|289167814|ref|YP_003446083.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] gi|288907381|emb|CBJ22218.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] Length = 274 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 147/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ ++ I + + K ++ D F G+ + + RR KY Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDL-DEFRKEVPGQIVESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFQFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQAFQTALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVYPARPSQTLTAEEMT------AIRDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C S CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGTMQDFHQVYDKTGKEC-SRCGTLIEKIQLGGRGTHFCPNCQR 272 >gi|109896382|ref|YP_659637.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas atlantica T6c] gi|123361457|sp|Q15ZV5|FPG_PSEA6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109698663|gb|ABG38583.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudoalteromonas atlantica T6c] Length = 270 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + I + K LR+ P A G K+ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQHIEQIIVRHKQLRWWVPDDVHLA-EGHKVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + SII+HLGMSG I ++ P+ +H+H+ I LTN + +ND R Sbjct: 60 FIDTDAG-SIILHLGMSGKLRIVNSE--TPVI--KHDHIDIVLTNGVCLR-----FNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + + + LGPEP + F+ L KN +KN +++ K+V G+ Sbjct: 110 RFGAC-LWQRVGDPEIGMIAALGPEPLTSDFDGQRLYDLSRTKNVPVKNFIMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + + + + L I++VL AI+ GG++L+D+ Sbjct: 169 GNIYANESLFIAGIDPRKAAKKVSKKS------YLALGDIIKQVLAKAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF VYG+ G+ C C I+ + R+TF+C CQK Sbjct: 223 QADGNPGYFAQHLRVYGRKGQAC-EVCESEIQSVTLGQRNTFFCEQCQK 270 >gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] Length = 285 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPE+PEVE +RR L ++ V+ + + + F G+++ V R K Sbjct: 2 MPEMPEVETVRRGLEEIVIGKIVSSVTVTWPRIIQAEGGVEAFETRMPGQQLEKVGRVGK 61 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL ++ I HL M G ++ E T P+ Q+ HV LT+ + + Y D Sbjct: 62 FLLFYWT-EVTWIAHLRMEGKYLYESTES--PVD--QYTHVICHLTDGHDLR-----YRD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + +VE + LGPEP D +F+ YL +F K ++K LL+Q ++A Sbjct: 112 VRKFGRIHMVEKADTEAEIAKLKLGPEPNDLTFD--YLQKRFDKTTRSIKAVLLDQGVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ AK+ P + RSL + +I E ++++ AI+ GG+++R Sbjct: 170 GIGNIYADEILFAAKIHPEQSARSLYDEE------IQAIITESRRIMASAIEVGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G F + YGK G+PC CG I +I A R T +C YCQ+ Sbjct: 224 YTNTFGENGQFADYLKAYGKKGQPC-PRCGTEIEKISVAKRGTHFCPYCQR 273 >gi|29829206|ref|NP_823840.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|39931257|sp|Q82JU0|FPG_STRAW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29606312|dbj|BAC70375.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 155/298 (52%), Gaps = 27/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L + + TV D+ LH + +R DF H +G+++ Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHTAGGEDFAHRL----KGRRVGVP 56 Query: 54 SRRAKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 SRR KYL + LE + +++ HLGMSG +++ CA + +H + + + T+ Sbjct: 57 SRRGKYLWLPLETTDTAVLAHLGMSGQLLVQPHDCA----DERHLRIRVRFADALGTE-- 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + D R FG + L +T+ + + +P D F+ +K + +K ALL Sbjct: 111 -LRFVDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDAAFHEALRRKRTTVKRALL 169 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +++G+GNIY EALWRA++ R T G + +L+ ++ V+ A+ G Sbjct: 170 DQSLISGVGNIYADEALWRARIHYERPT------AGFTRPRTAELLGHVRDVMNAALAVG 223 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 224 GTSFDSLYVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|93117323|gb|ABE99579.1| fpg [Neisseria meningitidis] Length = 258 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/270 (32%), Positives = 144/270 (53%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|299822774|ref|ZP_07054660.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] gi|299816303|gb|EFI83541.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T+ + +H + P F G++I V RR K+ Sbjct: 1 MPELPEVENVRTTLERQVIGKTIDQVIVHVPKMIHGLPADEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 LL +L + +I+ HL M G F + P P +H H+ T+ T + + Sbjct: 61 LLFDLT-DCTILSHLRMEGKFRV------YPETEPTTKHTHIIFHFTDQTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M + + L+ LGPEP F + K +K ALL+QK+V Sbjct: 109 DVRKFGTMQVAAKHQEETTNSLQKLGPEPLSAHFELAAFASKLKKTTRAVKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + A++ P+R L + L + +K++ A++AGGSS+R Sbjct: 169 AGVGNIYADEICFEAEVLPMRGGNELSDAE------VAALYEATKKIIGIAVEAGGSSIR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G +Q+ VYG+TGE CL CG + +I GR T +C CQK Sbjct: 223 TYENSQGKKGNYQDFLKVYGRTGEKCL-RCGGTVEKIKLNGRGTHFCRGCQK 273 >gi|47096729|ref|ZP_00234314.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|224499778|ref|ZP_03668127.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland 1988] gi|254828201|ref|ZP_05232888.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|254898269|ref|ZP_05258193.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161] gi|254912238|ref|ZP_05262250.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] gi|254936565|ref|ZP_05268262.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|47014913|gb|EAL05861.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|258600589|gb|EEW13914.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|258609160|gb|EEW21768.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|293590214|gb|EFF98548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|254831965|ref|ZP_05236620.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S] Length = 273 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKK------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|221135337|ref|ZP_03561640.1| Formamidopyrimidine-DNA glycosylase [Glaciecola sp. HTCC2999] Length = 270 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + T+ I + LR+ P +T G I V+RRAKYL Sbjct: 1 MPELPEVEVSRQGIEPGLVGQTIESIQIRTPKLRWPVPTEI-LSTHGHVIRSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + S+I+HLGM+G + S P+K +H+H+ I+LTN + +ND R Sbjct: 60 FINTDVG-SVILHLGMTGYLRV--FSQNTPLK--KHDHLDINLTNGQCLR-----FNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG L + + + LGPEP + F +L + + +K +++ K V G+ Sbjct: 110 KFGAC-LWQGVDDEPHVLISALGPEPLTDDFTIDHLYTRAQGRTCTVKQFIMDNKHVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK++P R + K L I++VL AI GG++L+D+ Sbjct: 169 GNIYANEALFLAKIAPKRAAGKV------SKARYATLTGYIKEVLAAAIAQGGTTLKDFS 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF+ +VYG++GEPC C I+ + R+TF+C CQ+ Sbjct: 223 QVDGNPGYFRLHLNVYGRSGEPC-RRCHTPIKSQMIGQRNTFWCPSCQR 270 >gi|284032687|ref|YP_003382618.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] gi|283811980|gb|ADB33819.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+ + LH + +R P F+A+ +G+ +RR Sbjct: 1 MPELPEVEVVRRGLADFTTGRTIDAVEVLHPRPVRRHLAGPDDFAASLKGQTFAAPARRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++ HLGMSG F ++ P+ P H+ I + + R + Sbjct: 61 KYLWLPLRSGDAVLAHLGMSGQFRVQ------PVGAPDEKHLRIRFRFADDGGEVRFL-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + E + + + +P D F+ ++ + LK ALL+Q +V Sbjct: 113 DQRMFGGLSYSEGGAELPGE-IAHIARDPFDPLFDLDAFVAGIRRRKTGLKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL + T +L +++ + V+ +A+D GG+S Sbjct: 172 SGVGNIYADEALWRAKLHYAKATETLKPLQAR------EILGHARAVMSEALDVGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ +VYG+ G C + G+ IRR RS+F C CQ Sbjct: 226 ALYVNVNGESGYFERGLAVYGQEGSGCPRD-GRPIRREPFMNRSSFRCPKCQ 276 >gi|254852187|ref|ZP_05241535.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|254931504|ref|ZP_05264863.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|255520154|ref|ZP_05387391.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-175] gi|300764770|ref|ZP_07074760.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|258605492|gb|EEW18100.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|293583056|gb|EFF95088.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|300514446|gb|EFK41503.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|328474917|gb|EGF45717.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 220] gi|332312006|gb|EGJ25101.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. Scott A] Length = 273 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|326561880|gb|EGE12215.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 7169] Length = 302 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 44/311 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDSLV-GFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYR 113 L++ ++++HLGMSGS + I P +H+HV I N ++ K Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSL-------QQHINEPPRKHDHVLIDFAN-SHGKIIT 110 Query: 114 VIYNDPRRFG---------FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-----Q 159 + Y+DPRRFG ++D T ++ L LGPEP F+A YL + Sbjct: 111 LHYHDPRRFGMILWVVNDDYIDQPNTYARF----LAHLGPEPLSEDFDANYLIRYIMRPK 166 Query: 160 FHKK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 H+K N +K+ +++Q +V G+GNIY E+L+ + + P+ L+ +D L +L Sbjct: 167 SHQKPLNKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY-LVH-----EDKLVRL 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I+++L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I + Sbjct: 221 THHIKQILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESC-ATCGSLLENIKIS 279 Query: 278 GRSTFYCTYCQ 288 GR++ YC CQ Sbjct: 280 GRASVYCPNCQ 290 >gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] gi|238689243|sp|B2HJJ6|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] Length = 292 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 148/305 (48%), Gaps = 35/305 (11%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V K MT + R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEG----------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL + L+ + +++VHLGMSG ++ P+ HV IS + Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGV--------PRAEHVRISAVLDD 112 Query: 108 NTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 T + + D R FG DLV P+ L +P D F+ + K+ Sbjct: 113 GTV---LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKH 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V Sbjct: 170 SEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADV 223 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FY Sbjct: 224 MREALAKGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFY 282 Query: 284 CTYCQ 288 C CQ Sbjct: 283 CPRCQ 287 >gi|78222421|ref|YP_384168.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] gi|90101303|sp|Q39WD1|FPG_GEOMG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78193676|gb|ABB31443.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] Length = 267 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LRF P + G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERELTGKRIDRVVVRTPKLRFPIPQELHVSLPGRTVRSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E +IVHLGM+G F+ A P K H+H+ I + T + ++DPR Sbjct: 61 LFDCETGW-LIVHLGMTG-FLRLVAGTAPPGK---HDHLDIVFADGTVLR-----FHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T +P L +GPEP +F+ YL + +K L+N IVAG+ Sbjct: 111 KFGTVAWT-TDAPATHPLLAAIGPEPLTATFDGAYLFAVTRTRRVAVKQLLMNAAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL G P+ +L + +++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRPASSL----GRPE--CERLARTVREVLQESIDQGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ Y F VYG+ + C + CG + I RST +C CQ Sbjct: 220 VEEETVAYHPLNFDVYGRGTDAC-TRCGGALEEIRLGNRSTVFCPRCQ 266 >gi|290893965|ref|ZP_06556941.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] gi|290556503|gb|EFD90041.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] Length = 273 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFDDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFSTGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|123967891|ref|YP_001008749.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. AS9601] gi|166198730|sp|A2BPD1|FPG_PROMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123198001|gb|ABM69642.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. AS9601] Length = 292 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 154/311 (49%), Gaps = 41/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP F R I RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEICRYST-VAFPTNKEEFIKGLRNSLIYKWDRRG 59 Query: 58 KYLLIEL---------------EGNLSIIVHLGMSGSF-IIEHTSCAKPIKNP-QHNHVT 100 KYL+ +L + N ++VHL M+G F IE++S NP +H V Sbjct: 60 KYLIAQLKEVQNEHTQLPLENSQNNGFLVVHLRMTGYFKFIENSS------NPCKHTRVR 113 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 NN + Y D R FG M + + SL L +LGPEP FNA YL Sbjct: 114 FFDKNNNELR-----YIDVRSFGQMWWINNDLSLNKIIKGLGSLGPEPFSKDFNANYLKK 168 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL Sbjct: 169 VISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLK 222 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R G Sbjct: 223 ESIVTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERQKITG 281 Query: 279 RSTFYCTYCQK 289 RST +C CQK Sbjct: 282 RSTHWCPKCQK 292 >gi|298242821|ref|ZP_06966628.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] gi|297555875|gb|EFH89739.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] Length = 308 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 148/312 (47%), Gaps = 33/312 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R L + T+ + + + P F A G+ I V RR K+ Sbjct: 1 MPELPEVEYTARQLQASIVGATIREAQVFWERIIAHPLPEDFCAQISGRTIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII------------EHTSCAKPIKNPQHNHVTISLTNNT 107 LL++L G +I+H M+G+F++ E + A + P T + Sbjct: 61 LLLDLSGEGLLIIHRRMTGNFLLLEPGWTLDTSLRERDAQAWSTRGPSFTLETDGSQAYS 120 Query: 108 NTKKY-----------RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 + Y +++ D R+FG + L + S + + LR LGPEP +FN L Sbjct: 121 SEMNYCRVCFILEDGRNLLFTDQRKFGRVSLWQRSQEEEV--LRGLGPEPLSEAFNIEGL 178 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + S +K LL+Q ++AG+GNIY EAL+ A++ P R SL + Sbjct: 179 AQALAHRRSPIKQVLLDQTVIAGVGNIYADEALFHARIHPRRAANSLTSQE------IAS 232 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L + + VL+ AI+ GG+S Y + G G N VY + G+PC + CG +I RIV Sbjct: 233 LHEAVVSVLLKAIEHGGTSFSSYRDLWGEAGDNYNHVHVYKQAGKPC-TRCGTLIERIVV 291 Query: 277 AGRSTFYCTYCQ 288 A RST +C CQ Sbjct: 292 AQRSTHFCPVCQ 303 >gi|302558161|ref|ZP_07310503.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302475779|gb|EFL38872.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 286 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 155/300 (51%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L + + TV D LH + +R DF H +G ++ Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHARAVRRHLAGADDFAHRL----KGHRVGVP 56 Query: 54 SRRAKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH--VTISLTNNTNTK 110 RR KYL + LE + S++ HLGMSG +++ P P H V + T++ +T+ Sbjct: 57 RRRGKYLWLPLEDTDQSVLAHLGMSGQLLVQ------PHAAPDEKHLRVRVRFTDSLDTE 110 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + L + + + + + +P D F+ + + +K A Sbjct: 111 ---LRFVDQRTFGGLSLHDNTPEGLPDVIAHIARDPLDPLFDEEAFHRALRSRRTTIKRA 167 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++G+GNIY EALWRA++ R T + P+ +L L+ ++ V+ A+ Sbjct: 168 LLDQSLISGVGNIYADEALWRARIHYERPTAGFTR----PRTLL--LLGHVRDVMNAALS 221 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 222 QGGTSFDSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|251781944|ref|YP_002996246.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390573|dbj|BAH81032.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 275 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 VFDF-GQTVLVSHLRMEGKYLL----FPDEVPEQKHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL K + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSL------KKAEIKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|166215639|sp|A0PQ49|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans Agy99] Length = 292 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 148/305 (48%), Gaps = 35/305 (11%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V K MT + R R + P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEG----------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL + L+ + +++VHLGMSG ++ P+ HV IS + Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGV--------PRAEHVRISAVLDD 112 Query: 108 NTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 T + + D R FG DLV P+ L +P D F+ + K+ Sbjct: 113 GTV---LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKH 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V Sbjct: 170 SEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADV 223 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FY Sbjct: 224 MREALAKGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFY 282 Query: 284 CTYCQ 288 C CQ Sbjct: 283 CPRCQ 287 >gi|320334927|ref|YP_004171638.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] gi|319756216|gb|ADV67973.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] Length = 270 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 147/298 (49%), Gaps = 42/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEVE RR L ++ T+ I D P + R G+ + D++RR K Sbjct: 1 MPELPEVETTRRKLEPLLLGRTIVRI-------EHDAPDKYRDTHRAHGRVVRDLTRRGK 53 Query: 59 YLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 Y+L L E + +IVHLGM+G F E P H VT+ +T + Sbjct: 54 YILARLQDPDGHEDDAELIVHLGMTGGFRYE--------PGP-HTRVTL------HTDEG 98 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + Y D R+FG +V+ P L +GPEP + F A+ + +K LL Sbjct: 99 AIYYQDARKFGKWAVVDPGAYASMPTLAGMGPEPLGDDF-AVDAFVRAAATCGPVKPWLL 157 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q VAG+GNIY E+LWRA++ P ++ +L D +L I++V+ +A+ AG Sbjct: 158 SQVPVAGVGNIYADESLWRARIHPAQRRLTL--------DEATRLHAAIREVMAEAVQAG 209 Query: 233 GSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L D Y DG G FQ + Y + GEPC + CG I + V A R T +C CQ Sbjct: 210 GSTLSDGTYAQPDGLSGLFQQQHNAYARDGEPC-ARCGTTITKSVLAQRGTHHCPACQ 266 >gi|217964289|ref|YP_002349967.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|217333559|gb|ACK39353.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|307571145|emb|CAR84324.1| mutM [Listeria monocytogenes L99] Length = 273 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFDDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCIV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|332534465|ref|ZP_08410304.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] gi|332036118|gb|EGI72594.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] Length = 269 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++N VT + ++ ++R+ P G + + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVQNQVVTKVNIYNASMRWPVPDDVYQ-LEGLIVTSIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E S I+HLGMSG+ + S +P+K +H+HV N K R+ NDPR Sbjct: 60 LLHCELG-STILHLGMSGNLRVVDKS--EPLK--KHDHVEFIFGNG---KALRL--NDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ L LGPEP + F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEVHKL--LSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC++ C + I RST +C+ CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCMT-CENELEEIRLGQRSTIFCSNCQK 269 >gi|157412690|ref|YP_001483556.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9215] gi|166988462|sp|A8G2Y9|FPG_PROM2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157387265|gb|ABV49970.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9215] Length = 293 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 108/310 (34%), Positives = 157/310 (50%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP+ F + +RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDST-VAFPNKKEDFIGGLNNSLLYKWNRRG 59 Query: 58 KYLLIELE----------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 KYL+ EL+ N +IVHL M+G F + S A+P K H I Sbjct: 60 KYLIAELKKLGNENGRFPLEKFSKNNGFLIVHLRMTGYFKFINNS-AQPCK-----HTRI 113 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQ 159 + +N N + + Y D R FG M ++ L L +LGPEP F+ IYL Sbjct: 114 RVFDNKNNE---LRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKV 170 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + Sbjct: 171 ISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKE 224 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I VL ++I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GR Sbjct: 225 SIVTVLKNSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERKKISGR 283 Query: 280 STFYCTYCQK 289 ST +C CQK Sbjct: 284 STHWCPKCQK 293 >gi|319440518|ref|ZP_07989674.1| hypothetical protein CvarD4_02017 [Corynebacterium variabile DSM 44702] Length = 290 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRG---KKIIDVSRR 56 MPELPEVE++RR L + T+ LH + +R P +A G +I + RR Sbjct: 1 MPELPEVEVVRRGLAEHITGATIVGTEVLHPRAVRGQ-PGGAAALEAGLEDARITALRRR 59 Query: 57 AKYLLIELE-----------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 KYL I+LE ++VHLGMSG ++ + +P H + L Sbjct: 60 GKYLWIDLEYPRGGQGSGQSSGRCLLVHLGMSGQMLLGEPG---QVTSP-HLRIRSLLVT 115 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 +T ++ + + D R FG +L + P+ + +P D +F+A + KK S Sbjct: 116 DTG-RELELSFVDQRTFGRWELTAPGVT---DPVPHIAVDPLDAAFDAAHTARVIRKKRS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +V+GIGNIY EALW A++ P +K ++ Q + + L+ +V+ Sbjct: 172 EIKRVLLDQTVVSGIGNIYADEALWAAQVHPRKKATAMRQTD------VISLLDAATEVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ AGG++ D YV+++G+ GYF + +VYG+ GEPC CG + R RS+ +C Sbjct: 226 TRALAAGGTTFDDLYVNVNGASGYFSRSLNVYGREGEPC-PRCGTPVVREQWTNRSSHFC 284 Query: 285 TYCQK 289 CQ+ Sbjct: 285 PECQR 289 >gi|119717504|ref|YP_924469.1| formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|166215641|sp|A1SLU7|FPG_NOCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119538165|gb|ABL82782.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardioides sp. JS614] Length = 295 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + LH + +R D P F+AA G++I RR Sbjct: 1 MPELPEVEVVRAGLERHVLGATIARVDVLHPRPVRRDLRGPAGFAAALTGRRIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ P P H+ + L + + + Sbjct: 61 KYLWLPLDNGDALLGHLGMSGQLLVQ------PPDAPDERHLRVRLALEGADEGRELRFV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + P + + +P D F+ + ++ S +K LL+Q ++ Sbjct: 115 DQRMFGGLSVSAGGADLP-PEIAHIARDPLDPEFDDDDFVRRVRRRTSGVKRQLLDQNLI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R L + +L+ ++V++ A+ GG+S Sbjct: 174 SGVGNIYADEALWRARIHGERPGDRLTATR------VRELLAHAREVMLAALGEGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GE C CG IRR+ RS+++C CQ Sbjct: 228 ALYVNVNGESGYFDRSLHAYGREGEAC-ERCGTPIRRVAFMNRSSYFCPVCQ 278 >gi|282861355|ref|ZP_06270420.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] gi|282564013|gb|EFB69550.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] Length = 285 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 154/296 (52%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ LH + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVEDVDVLHPRAVRRHIAGGPDFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTKKYRV 114 KYL I L E + S++ HLGMSG +++ P + P H+ I + ++ T+ + Sbjct: 61 KYLWIPLDEVSASLLGHLGMSGQLLVQ------PSEAPDEKHLRIRVRFADDLGTE---L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + L + + + + +P D +F+ + + +K ALL+Q Sbjct: 112 RFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHTALRLRRTTVKRALLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EALWR++L R T +L + +L+ ++ V+ +A+ GG+ Sbjct: 172 SLISGVGNIYADEALWRSRLHYERPTATLTRPRTA------ELLGHVRDVMREALAQGGT 225 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF + YG+ EPC CG +RR RS++YC CQ+ Sbjct: 226 SFDSLYVNVNGQSGYFDRSLDAYGREDEPC-HRCGTPMRRRPWMNRSSYYCPRCQR 280 >gi|317506413|ref|ZP_07964218.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] gi|316255293|gb|EFV14558.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + LH + R +AA G+ ++ V RR Sbjct: 1 MPELPEVEVVRRGLAEELAGARLRQVRVLHPRAARRHPGGGALLAAALAGRDVLAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G S+++HLGMSG F I NP H + L + + + Sbjct: 61 KYLWLVLDGEDSVVMHLGMSGQFRIGEEGMPG---NPNHLRIEADLADGRTLQ-----FF 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG F L E + P+ + +P D F+ + + K S +K LL+Q Sbjct: 113 DQRTFGGWEFAPLKEVDGELVPVPVAHIARDPFDPKFDPVQAARRIRAKRSAIKRVLLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY E+LWRA+L R L Q L+ E+ V+ ++I GG+ Sbjct: 173 TVLSGVGNIYADESLWRARLHGERPAAELGQRKAV------ALLGEVASVVHESITEGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G F + +VYG+ G+PC CG IRR RS+ +C CQK Sbjct: 227 SFDSLYVNVNGESGQFSDWLAVYGQEGKPC-RRCGAAIRREAFMNRSSHFCPKCQK 281 >gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc fallax KCTC 3537] Length = 275 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 139/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L ++ + +I + + K + D P F T + + RR KY Sbjct: 1 MPELPEVETVRSGLEKLIVGGEIANIRVPYPKVIMGDAPA-FIQGTLASQFTAIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L +I+ HL M G + +E P+ P H H I + YND Sbjct: 60 LFLRLSNQRTIVSHLRMEGQYSVE------PLDAPLHKHTEIVFELADGRALF---YNDT 110 Query: 120 RRFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG M L ET L + P L LGPEP + Y+ F K +K+ LL+Q +A Sbjct: 111 RRFGRMTLAETGLEQIAVPTLAKLGPEPITTDLHLEYMIQIFAKSKKPVKSFLLDQTKIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW++K+ P L + L L I + AI G+++ Sbjct: 171 GIGNIYADEVLWQSKIHPETPANELDPSQ------LAILRDSIISEIALAIKHHGTTVHS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ G +G FQN VYG++G PCL CG + +I R T +C CQ Sbjct: 225 FSNVFGEVGQFQNQLEVYGRSGLPCL-RCGTPLVKIRVGQRGTTFCPKCQ 273 >gi|313608605|gb|EFR84469.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-208] Length = 273 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFDDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + K+I + + + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFEAKVCPERAANSL-----SDKEIKH-IFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|254526097|ref|ZP_05138149.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] gi|221537521|gb|EEE39974.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] Length = 293 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 109/310 (35%), Positives = 157/310 (50%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP F + + +RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDST-VAFPSKKEDFIGGLQNSLLYKWNRRG 59 Query: 58 KYLLIELE--GNLS--------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 KYL+ EL+ GN + +IVHL M+G F S A+P K H I Sbjct: 60 KYLIAELKKLGNENGRFPLEKFSKKNGFLIVHLRMTGYFKFIDCS-AQPCK-----HTRI 113 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQ 159 + +N N + + Y D R FG M ++ L L +LGPEP F+ IYL Sbjct: 114 RVFDNKNNE---LRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKV 170 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + Sbjct: 171 ISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKE 224 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GR Sbjct: 225 SIVTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKAC-RKCGNLIERKKISGR 283 Query: 280 STFYCTYCQK 289 ST +C CQK Sbjct: 284 STHWCPKCQK 293 >gi|169833803|ref|YP_001694415.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] gi|168996305|gb|ACA36917.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] Length = 285 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 12 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 70 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 71 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 118 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 119 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 178 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 179 AGLGNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 232 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GRST +C CQ+ Sbjct: 233 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRSTHFCPNCQR 283 >gi|326563315|gb|EGE13582.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 46P47B1] gi|326563430|gb|EGE13695.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 12P80B1] gi|326565969|gb|EGE16130.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 103P14B1] gi|326568897|gb|EGE18966.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC1] gi|326575382|gb|EGE25307.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 101P30B1] gi|326576529|gb|EGE26437.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis CO72] gi|326578000|gb|EGE27864.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis O35E] Length = 302 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 44/311 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDSLV-GFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYR 113 L++ ++++HLGMSGS + I P +H+HV I + ++ K Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSL-------QQHINEPPRKHDHVLIDFAD-SHGKIIT 110 Query: 114 VIYNDPRRFG---------FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-----Q 159 + Y+DPRRFG ++D T ++ L LGPEP F+A YL + Sbjct: 111 LHYHDPRRFGMILWVVNDDYIDQPNTYARF----LAHLGPEPLSEDFDANYLIRYIMRPK 166 Query: 160 FHKK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 H+K N +K+ +++Q +V G+GNIY E+L+ + + P+ L+ +D L +L Sbjct: 167 SHQKPLNKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY-LVH-----EDKLVRL 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I+++L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I + Sbjct: 221 THHIKQILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESC-ATCGSLLENIKIS 279 Query: 278 GRSTFYCTYCQ 288 GR++ YC CQ Sbjct: 280 GRASVYCPNCQ 290 >gi|93117327|gb|ABE99581.1| fpg [Neisseria meningitidis] Length = 245 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/257 (34%), Positives = 138/257 (53%), Gaps = 14/257 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYLLI + + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQTGV-LL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + + +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCG 268 ++VYG+ +PC CG Sbjct: 230 EYTVYGRHNQPC-PQCG 245 >gi|300783720|ref|YP_003764011.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299793234|gb|ADJ43609.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 289 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 144/296 (48%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + + T+ + LH + +R F+ G ++ RR Sbjct: 1 MPELPEVEVVRLGLQVHVAGRTIREAEVLHPRAIRRHALGAEDFTQRLAGTRVEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ P P H+ + L + + R + Sbjct: 61 KYLWLELSDKEALLAHLGMSGQMLVQ------PEGAPDEKHLRVRLRFEDDGPELRFV-- 112 Query: 118 DPRRFGFM---DLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + DL + + P + + +P D F+ + + +K ALL+ Sbjct: 113 DQRTFGGLALDDLSDIGSEVLLPDTIAHIARDPMDPEFDLDAAVRALRSRRTEVKRALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA+L R T L G +L+ V+ A+ AGG Sbjct: 173 QTLVSGIGNIYADEALWRARLHWARPTEKLTMAKGR------ELLSAASDVMNAALGAGG 226 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ G PC CG IRR RS+F C CQ Sbjct: 227 TSFDALYVNVNGQSGYFDRSLDAYGQEGMPC-HRCGTAIRREPFMNRSSFSCPRCQ 281 >gi|296112372|ref|YP_003626310.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|295920066|gb|ADG60417.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|326571870|gb|EGE21875.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC8] Length = 302 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 44/311 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDSLV-GFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYR 113 L++ ++++HLGMSGS + I P +H+HV I + ++ K Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSL-------QQHINEPPRKHDHVLIDFAD-SHGKIIT 110 Query: 114 VIYNDPRRFG---------FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-----Q 159 + Y+DPRRFG ++D T ++ L LGPEP F+A YL + Sbjct: 111 LHYHDPRRFGMILWVVNDDYIDQPNTYARF----LAHLGPEPLSEDFDANYLIRYIMRPK 166 Query: 160 FHKK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 H+K N +K+ +++Q +V G+GNIY E+L+ + + P+ L+ +D L +L Sbjct: 167 SHQKPLNKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY-LVH-----EDKLVRL 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I+++L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I + Sbjct: 221 THHIKQILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESC-ATCGSLLENIKIS 279 Query: 278 GRSTFYCTYCQ 288 GR++ YC CQ Sbjct: 280 GRASVYCPNCQ 290 >gi|158312992|ref|YP_001505500.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] gi|229541073|sp|A8L594|FPG_FRASN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158108397|gb|ABW10594.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] Length = 291 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-----HFSAATRGKKIIDVSR 55 MPELPEVE++RR L + TV ++ +H +LR H HF+A+ G+ + R Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVH--HLRAVRRHLAGADHFAASLVGQTVATARR 58 Query: 56 RAKYLLIELEGNL--------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 R KYL + L + +++ HLGMSG ++ P +P H+ + Sbjct: 59 RGKYLWLGLTPSEPGGPAVGDALLGHLGMSGQLLV------VPADSPDQVHLRVRFRFTD 112 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 ++ R + D R FG + +V + P + + P+P F+ ++ + L Sbjct: 113 EGRELRFV--DQRTFGGLAVVSGGAELPAP-IAHIAPDPLSVDFDPERFADALRRRRTGL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q +++G+GNIY E LW A+L R T ++ + +L+ ++ V+ Sbjct: 170 KRALLDQTLISGVGNIYADEGLWAARLHYARPTETVTRAEA------LRLLDAVRTVMTA 223 Query: 228 AIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ AGG+S R YV +G G F+ + VYG+ G+ C S C IRR RS+F C Sbjct: 224 ALAAGGTSFDRLYVSTEGVSGLFERSLEVYGRGGQAC-SRCASTIRRDAFMNRSSFSCPA 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|326569197|gb|EGE19258.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC7] Length = 302 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 162/311 (52%), Gaps = 44/311 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVKHPRLRYDIAKDLDSLV-GFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYR 113 L++ ++++HLGMSGS + I P +H+HV I + ++ K Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSL-------QQHINEPPRKHDHVLIDFAD-SHGKIIT 110 Query: 114 VIYNDPRRFG---------FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-----Q 159 + Y+DPRRFG ++D T ++ L LGPEP F+A YL + Sbjct: 111 LHYHDPRRFGMILWVVNDDYIDQPNTYARF----LAHLGPEPLSEDFDANYLIRYIMRPK 166 Query: 160 FHKK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 H+K N +K+ +++Q +V G+GNIY E+L+ + + P+ L+ +D L +L Sbjct: 167 SHQKPLNKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY-LVH-----EDKLVRL 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I+++L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I + Sbjct: 221 THHIKQILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESC-ATCGSLLENIKIS 279 Query: 278 GRSTFYCTYCQ 288 GR++ YC CQ Sbjct: 280 GRASVYCPNCQ 290 >gi|148238875|ref|YP_001224262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] gi|147847414|emb|CAK22965.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] Length = 283 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 148/299 (49%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + DI + R P RG+K+ SRR K Sbjct: 1 MPELPEVETVRRGLANRLQSFVIDDIEVLRDRAVASPGGPQALRLGLRGQKVGAWSRRGK 60 Query: 59 YLLIELEG------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ +L N VHL M+G F T P + +H V + NT Sbjct: 61 YLVAQLHDPQTGHCNGVWGVHLRMTGQFQWHPT----PTEPCRHTRVRL-----WNTAGE 111 Query: 113 RVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V S+ L+ LGPEP FNA YL + ++K A Sbjct: 112 ELRFVDLRSFGEMWFVPQNVSIDAVMTGLQRLGPEPFSEEFNATYLEQKLKGSTRSIKAA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG GNIY E+L+ A ++P RK L P+ L +L + VL +I Sbjct: 172 LLDQAVVAGAGNIYADESLFAAGIAPHRKAGEL----NLPE--LERLCTCLVDVLEMSIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGG++ D+ ++G G + SVY +TG+PCL+ CG I R GRST +C CQ+ Sbjct: 226 AGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPCLA-CGTPIERQRLGGRSTHWCPVCQR 283 >gi|289434844|ref|YP_003464716.1| hypothetical protein lse_1479 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171088|emb|CBH27630.1| fpg [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 273 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNET----DEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK-VLIDAIDAGGSSLRD 238 IGNIY E + AK+ P R SL + K+I KL+ E K ++ +A+ GGS++R Sbjct: 171 IGNIYADEICFEAKVRPERAANSL-----SNKEI--KLVFEATKNIMTEAVALGGSTVRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q VYGKTGEPC+ C I +I GR T +C CQK Sbjct: 224 YVNSQGELGRYQEKLKVYGKTGEPCVI-CRTQIEKIKLNGRGTHFCPNCQK 273 >gi|225873850|ref|YP_002755309.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792432|gb|ACO32522.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 280 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 41/305 (13%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + + + + + R+ + D P +A G++I V R K Sbjct: 1 MPELPEVETVAQGVHERAHGQRILAAEFSRAREPFKTD-PDTMAAVLTGQRIARVHRVGK 59 Query: 59 YLLIELE-----------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 +++ +LE + IVHLGM+G + +++ + P+ P H H +SL++ Sbjct: 60 HIVFDLETPRPPKGKAEPADHQWIVHLGMTGRLL--YSAASVPV--PPHTHGRLSLSSGH 115 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIYLTHQFHKKN 164 + + D RRFG M L + + Q P G EP + F A+ F + Sbjct: 116 ELR-----FVDARRFGRMGL-HSGARAQ--PFSGPGSEPLHISPEDFAAL-----FRGRK 162 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++K ALLNQK++ G+GNIY E+L+ A + P R SL ++ L KL +Q+V Sbjct: 163 LSIKAALLNQKLLHGVGNIYADESLYWAGIRPTRIAGSL------SRERLLKLHAALQQV 216 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L AI+ GGSS+ DYV DG G+FQ VY + GEPC + C IR++V AGR T YC Sbjct: 217 LRKAIELGGSSVSDYVDADGVRGFFQLEHRVYDRAGEPCRA-CAAEIRKMVHAGRGTHYC 275 Query: 285 TYCQK 289 CQ+ Sbjct: 276 PRCQR 280 >gi|93117331|gb|ABE99583.1| fpg [Neisseria meningitidis] Length = 247 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 14/257 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + + ++ Sbjct: 4 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LL 62 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E Sbjct: 63 IHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 116 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 117 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 176 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L K L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 177 AGISPHRPANRL------KKKECALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 230 Query: 252 AFSVYGKTGEPCLSNCG 268 ++VYG+ +PC CG Sbjct: 231 EYTVYGRHNQPC-PQCG 246 >gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ LH + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + E + S++ HLGMSG ++ +P P H+ I + + + + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLV------RPADAPDEKHLRIRMRFD-DALGTELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRSA------ELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|322376465|ref|ZP_08050958.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] gi|321282272|gb|EFX59279.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] Length = 274 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 147/293 (50%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L +++ K ++ +I H K ++ D F G+ + + RR K Sbjct: 1 MPELPEVETVRCGLEKLILGKKISSIEIRYH-KMIKTDL-DEFQKEVPGQVVELMGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIY 116 YLL L + +I HL M G + P + P+ H HV I + ++Y Sbjct: 59 YLLFYLTDKV-LISHLRMEGKYFY------YPDQAPERKHAHVLIHFEDGGT-----LVY 106 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M+L+ L Y + +GPEP + F+ K +K+ LL+Q + Sbjct: 107 EDVRKFGTMELLSPDLLDAYFISKKIGPEPIEQDFDVQVFQAALTKSKKPIKSHLLDQTL 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E LWRA++ P R +++L + + VL A+D GGS++ Sbjct: 167 VAGLGNIYVDEVLWRAQVHPARPSQTLTVAEAIA------IHDQTIAVLSQAVDKGGSTI 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R Y + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 221 RTYTNAFGEDGTMQDFHQVYDKAGQEC-SRCGTVIEKIQLGGRGTHFCPQCQR 272 >gi|315282487|ref|ZP_07870891.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] gi|313613871|gb|EFR87611.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] Length = 273 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL +L N +I+ HL M G F + E+ +K H H+ ++T + + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVSK------HTHIIFHFEDHTELR-----FL 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+V Sbjct: 109 DVRKFGTMEVTSKYGEAETRSIKKLGPEPLTEAFTLADFATGVKKTSRAIKTALLDQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E + AK+ P R SL + K+I ++ + + ++ +A+ GGS++R Sbjct: 169 AGVGNIYADEICFAAKVRPERAANSL-----SDKEI-KRIFEATKSIMTEAVALGGSTVR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +Q+ VYGK GE C+ CG I +I GR T +C CQK Sbjct: 223 TYVNSQGKLGQYQDKLKVYGKAGESCVI-CGTPIEKIKLNGRGTHFCPNCQK 273 >gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689009|sp|B1VYY1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ LH + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + + E + S++ HLGMSG ++ +P P H+ I + + + + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLV------RPADAPDEKHLRIRMRFD-DALGTELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPETIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRSA------ELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|328885313|emb|CCA58552.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 286 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ LH + +R F+A G++ RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVTEVEVLHPRAVRRHPAGGADFAARLTGQRFEVARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L E S++ HLGMSG +++ A + +H + I ++ T+ + + Sbjct: 61 KYLWLPLAESGTSVLGHLGMSGQLLVQPEGAA----DEKHLRIRIRFDDSAGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDQTPAGLPDVIGHIARDPLDPEFDDAAFQSALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYDRPTATLTRPRSA------ELLGHIRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 280 >gi|262202010|ref|YP_003273218.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] gi|262085357|gb|ACY21325.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFS--AATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+ + LH + R R K + V RR Sbjct: 1 MPELPEVETVRRGLADHLVGRTIRKVEVLHPRAARRHVGGDLDLIGRLRNKSVTGVRRRG 60 Query: 58 KYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL +++ +++VHLGMSG +I P H H+ I + + + + Sbjct: 61 KYLWLDVADARDRAAVVVHLGMSGQMLIARAGA------PDHTHLRIRASLDDGNE---L 111 Query: 115 IYNDPRRFGFM---------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + D R FG D V S + + +P D F+A + K+S Sbjct: 112 RFVDQRTFGGWHVDDYAEPEDAVAQSSSLLPTSVAHIARDPFDPDFDAEATVSRIRTKHS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +++G+GNIY EALWRA+L R +G + L +L+ + V+ Sbjct: 172 EIKRVLLDQTVISGVGNIYADEALWRARLYGGRVA------DGISRPKLRELLTAVSDVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 +A+ GG+S YV+++G GYF+ + + YG+ G+PC CGQM+RR RS+++C Sbjct: 226 GEALAVGGTSFDALYVNVNGQSGYFERSLNAYGRAGQPC-RRCGQMMRRESFMNRSSYFC 284 Query: 285 TYCQK 289 CQ+ Sbjct: 285 PRCQR 289 >gi|239982551|ref|ZP_04705075.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291454393|ref|ZP_06593783.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] gi|291357342|gb|EFE84244.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] Length = 286 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 150/296 (50%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +V LH + +R F+ G + RR Sbjct: 1 MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTKKYRV 114 KYL + ++ +++ HLGMSG +++ P + P H+ + L ++ T+ + Sbjct: 61 KYLWLPVDDAPFAVLAHLGMSGQLLVQ------PGEAPDEKHLRVRLRFADDLGTE---L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + L +T + + +P D F+ ++ + +K ALL+Q Sbjct: 112 RFVDQRTFGGLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+D GG+ Sbjct: 172 SLISGVGNIYADEALWRSRLHYDRPTATLTRPRSA------ELLTHIRAVMTAALDVGGT 225 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF + YG+ GEPC CG IRR RS+++C CQ+ Sbjct: 226 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-DRCGTPIRRRPWMNRSSYFCPRCQR 280 >gi|225854474|ref|YP_002735986.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] gi|225723258|gb|ACO19111.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] Length = 274 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ + K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQYALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|330980019|gb|EGH78285.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 240 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 19/258 (7%) Query: 32 NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 LR+ P G++I+ V RRAKYLLI+ E ++I HLGMSG+ + + Sbjct: 2 RLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIQAEVG-TLISHLGMSGNLRLVEAG----L 56 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 +H HV I L + + Y DPRRFG M + + + + L LGPEP + F Sbjct: 57 PALKHEHVDIELESGLALR-----YTDPRRFGAM--LWSLDPHNHELLIRLGPEPLTDLF 109 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 110 DGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRAR---- 165 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG + Sbjct: 166 --YLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTTL 222 Query: 272 RRIVQAGRSTFYCTYCQK 289 R + R++ YC CQ+ Sbjct: 223 REVKLGQRASVYCPKCQR 240 >gi|148656079|ref|YP_001276284.1| formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] gi|166198744|sp|A5UUN1|FPG_ROSS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148568189|gb|ABQ90334.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] Length = 273 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 32/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--------PHHFSAATRGKKIID 52 MPELPEV++ +L + + + + R D+ P F G+++ Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRV------ERLDWTRMVETPSPDEFITLLAGRQVHG 54 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 RRAK++L+ L+G ++ +HL MSGS ++ A P K H H+ + L + Sbjct: 55 WGRRAKWILLFLDGGWTLALHLRMSGSLTVQPAD-APPDK---HTHLVLRLDDGRQ---- 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V + DPR+FG L++ + G EP N+F L + +K LL Sbjct: 107 -VFFRDPRKFGRARLLDADGRAALDAAH--GDEPLSNAFTVERLAELLRGRKRAIKPLLL 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++AGIGNIY EALWRA++ P+R L D + L I+ L A+ G Sbjct: 164 DQAVIAGIGNIYADEALWRARIHPLRPASDL------SADEVAALHDGIRAALRQALTNG 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY + G+ G Q+ F+ Y + G+PC CG I + V A R T YC CQ+ Sbjct: 218 GSTLRDYRNSYGTRGTNQDHFNAYDREGQPC-PRCGATIIKTVVAQRGTHYCPECQR 273 >gi|51891987|ref|YP_074678.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] gi|81692172|sp|Q67R59|FPG_SYMTH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|51855676|dbj|BAD39834.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + + +I R+ D P F+A G D+ RR K Sbjct: 1 MPELPEVETVRRTLCPRVVGRRIRRVEILTPRQIYHPD-PATFAADLEGAVFDDIERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L G ++ HL MSG + C P+H HV L + + Y D Sbjct: 60 YLLFRL-GPRILVAHLRMSGHLYV----CGPEAPRPRHLHVVFHLDDGGELR-----YAD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG L+ + P L LGPEP F L + +++++K ALLNQ +VA Sbjct: 110 QRKFGGFHLLGPGGEGMPPGLANLGPEPLSPEFTPQVLAERLAGRHTSIKAALLNQALVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A++ P R+ SL TP ++ +L I++VL+ A++ G++ Sbjct: 170 GLGNIYADEALFCARIHPAREAGSL-----TPAEV-ERLHGCIRRVLLRAVERRGTTFSL 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y +G+ G + V+ + GEPC CG IR++ A R T +C CQ Sbjct: 224 YRDGEGNEGDMYDELQVFDRAGEPC-PVCGTPIRKVAVAQRGTHFCPRCQ 272 >gi|171920356|ref|ZP_02931689.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902783|gb|EDT49072.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 275 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N + YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKF---YYQAKEEWFNLAHTHIIIEFNNGMQLR-----YNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL +F K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKFKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P +++ N T KD K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFP-----TILAKNLTLKD-YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPC-QICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] Length = 306 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L +++ + + + + K ++ D F G+ SRR KY Sbjct: 1 MPELPEVETVVRTLELLIPDRRIEHVEVRVPKMIQMD-AGEFCRRLEGQHFRRFSRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +++ ++ I H+ M G F ++ +P+ +H HV L + T + Y+D Sbjct: 60 LIFQMD-DVYFIAHMRMEGKFYVQRPE--EPLS--KHIHVIFDLDDGTQLR-----YHDT 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+E + ++ LGPEP D+ FN Y K+ +K LL+Q VAG Sbjct: 110 RKFGTMELMELNGDLRH--FHELGPEPFDDEFNPDYCRAFLKKRRVPIKQVLLDQSFVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + ++ P ++ L + T L + +++L AI+AGGSS+R Y Sbjct: 168 IGNIYANEICFALRIDPRKRCDQLTKAQIT------ALPEITRQILSLAIEAGGSSIRSY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+G+ GE C CG I++I A R T+YC +CQK Sbjct: 222 TSSLGVTGRFQLQIQVHGREGEAC-PLCGGPIKKIAVAQRGTYYCPHCQK 270 >gi|320008313|gb|ADW03163.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC 33331] Length = 285 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 150/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + LH + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L E + S++ HLGMSG +++ + +H + I + T+ + + Sbjct: 61 KYLWVPLDEADSSLLGHLGMSGQLLVQPEDAV----DEKHLRIRIRFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T SL + +L+ ++ V+ +A+D GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTASLTRPRTA------ELLGHVRAVMREALDQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|168494399|ref|ZP_02718542.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] gi|183575665|gb|EDT96193.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] Length = 274 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|281356218|ref|ZP_06242711.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] gi|281317587|gb|EFB01608.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] Length = 274 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 156/290 (53%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E I R L + + + + +R SA G++IIDV RRA+Y+ Sbjct: 1 MPELPEAENIGRALKRALVERRIVKVEVFTPAMREPLTPLLSAGLEGRRIIDVRRRARYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++EL+ +++H GMSG +E + +H HV + L + + +R + R Sbjct: 61 VVELDDGRGLLMHFGMSGVVRVESPE----VPRRKHEHVFLHLDDG---RAFR--FECTR 111 Query: 121 RFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RF + + E +P L LG EP ++FN YL + + +KN ++N +IV G Sbjct: 112 RFSVLKVCELPRPGGWPSELDALGVEPLTDAFNGNYLYEKSRGRTGCVKNFIMNNEIVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++SP+R+T S+ + + ++ + +++L AI+ GG+S+ D+ Sbjct: 172 IGNIYATETLYASEVSPLRETGSVTREECS------RIAECAKRILARAIELGGTSISDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++DGS G F +VYG+ G+ C CG+ I GRS+ +C CQK Sbjct: 226 LNVDGSEGKFALELAVYGRKGQAC-PKCGERIEMRKLGGRSSCFCPVCQK 274 >gi|307127479|ref|YP_003879510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] gi|306484541|gb|ADM91410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] Length = 274 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQIHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|33866493|ref|NP_898052.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8102] gi|39931216|sp|Q7U4V2|FPG_SYNPX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633271|emb|CAE08476.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Synechococcus sp. WH 8102] Length = 278 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 143/294 (48%), Gaps = 23/294 (7%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + ++C R F G ++ SRR K Sbjct: 1 MPELPEVETVRRGLADRLSLFEIERVEVCRSRAIASSGGVAAFLVGLTGARVGTWSRRGK 60 Query: 59 YLLIELEGNLSII-VHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 YL+ LE N I VHL M+G F IE +P H V N N + R + Sbjct: 61 YLMAALEPNRGIWGVHLRMTGQFQWIE-----EPSTPCTHTRVRFW---NANGHELRFV- 111 Query: 117 NDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG M V + L P L LGPEP +F+A YL Q + +K ALL+Q Sbjct: 112 -DVRSFGEMWWVPPDVELTVGIPGLARLGPEPFSEAFSAPYLKRQLKNSSRPIKTALLDQ 170 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +VAG+GNIY E+L+ A + P+ L L +L + +VL +I AGG+ Sbjct: 171 ALVAGVGNIYADESLFSAGIPPLTPAGRLTLAQ------LERLRSSLVEVLTTSIGAGGT 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D+ ++G G + VY + GEPC CG +IRR +GRST +C CQ Sbjct: 225 TFSDFRDLEGVNGNYGGQAWVYRRGGEPC-RRCGTIIRRDKLSGRSTHWCPTCQ 277 >gi|319761702|ref|YP_004125639.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|330823573|ref|YP_004386876.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] gi|317116263|gb|ADU98751.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|329308945|gb|AEB83360.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] Length = 271 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 150/293 (51%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ RR L + T+ + L K+LR+ P + G++++ V RR Sbjct: 1 MPELPEVEVTRRGLADAIGGATIRAVALG-KSLRWPLGLAPGELA----GQRVLAVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL++L+ L +I HLGMSGS H P + P H+H + T + + Sbjct: 56 KYLLLDLQQGLLLI-HLGMSGSLRFAH---GLPQRGP-HDHFDMETDRGT------LRLH 104 Query: 118 DPRRFGFMDLVETSLKYQYPPL-RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + Q L TLG EP F+ +K LL ++ Sbjct: 105 DPRRFGAVVWAAGEDDPQARKLLGTLGVEPLGEDFDFQAFHAALRASRMPIKQLLLAGRV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY CE L+ A++ P + ++ +L I++VL A++ GGS+L Sbjct: 165 VVGVGNIYACEVLFLARIRPTMRASAIGSQRAR------RLHGAIREVLARAVERGGSTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ +DG+ G+FQ +VYG+ G PC CG +R + Q RST++C CQ+ Sbjct: 219 RDFSGVDGNAGHFQAEANVYGREGLPC-RQCGTPVRLLRQGQRSTYFCPNCQR 270 >gi|227488593|ref|ZP_03918909.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091487|gb|EEI26799.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 273 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L +++ + V+ LH + R + G++I RR K+ Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAARST--EALAPRLAGREICGTGRRGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L+G ++++HL MSG I T A+P+ H + L T V + D Sbjct: 59 LWLVLDGAEALVIHLRMSGQMRITQT--ARPVS--PHTRIVAELDGLT------VQFVDQ 108 Query: 120 RRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG L E L P L + P+ D S + + + LK ALLNQ IV+ Sbjct: 109 RTFGSWSLSE--LVGGLPVTLAHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVS 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LWRA+L P R+TRS + + L +L+ Q V+ DA+ GG+S + Sbjct: 167 GIGNIYADEMLWRARLHP-RQTRSHVSPH-----RLTELLLAGQDVMRDALAQGGTSFDE 220 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 221 LYVNVNGESGYFDRSLNAYGKAGLPC-DRCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|255325274|ref|ZP_05366380.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] gi|255297839|gb|EET77150.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + + R N D P S GK++ V+RR K Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEP--LSGLLIGKEVAAVARRGK 58 Query: 59 YLLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +E G S + +HLGMSG I T + H ++ L+ Sbjct: 59 FMWLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTT-------DSPHLRISAQLSGGVE--- 108 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG+ L + + +G +P + F+ + + K + +K AL Sbjct: 109 --LSFVDQRTFGYW------LYAPWAKISHIGIDPLEPDFDIVATARRLRAKKTAVKTAL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ Sbjct: 161 LDQTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLESAQEVMTAALKV 214 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 215 GGTSFDSLYVNVNGESGYFSRSLAAYGRAGQPC-QRCGTPLERCVISGRSTHFCPHCQ 271 >gi|315640781|ref|ZP_07895883.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] gi|315483536|gb|EFU74030.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] Length = 276 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 141/292 (48%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + ++ + + + G+ + + RR K+ Sbjct: 1 MPELPEVETVRRGLEQLVIGKTIQSVSVYWDRMIEGGDKEKVAFELVGQTVEAIQRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSG--SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+ N +I HL M G F + T +K H HV T+ + + Y Sbjct: 61 LIFRYTAN-DLISHLRMEGKYEFFPQETPPSK------HTHVIFHFTDGSE-----LHYQ 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG LV +Y + LGPEP ++ F K +K LL QK+V Sbjct: 109 DVRKFGRFALVAKGKSAEYAGIAKLGPEPTNDQFLLGAFQQGLAKSKKAVKPLLLEQKLV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EALW+AK+ P R +L + L Q I VL A+ AGG+++R Sbjct: 169 TGLGNIYVDEALWQAKIHPERLACTLTTDESIA------LHQAIIDVLGKAVIAGGTTIR 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G FQ A YG+ G+PC S CG +I + A R T +C CQK Sbjct: 223 TYHNALGEAGTFQVALHAYGQQGKPC-SRCGTLIVKTKVAQRGTHFCPNCQK 273 >gi|221231733|ref|YP_002510885.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] gi|220674193|emb|CAR68721.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] Length = 274 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARSSQTLTAEEATA------IHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|289672463|ref|ZP_06493353.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 19/258 (7%) Query: 32 NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI 91 LR+ P G++I+ V RRAKYLLI E ++I HLGMSG+ + + Sbjct: 5 RLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIRAEVG-TLISHLGMSGNLRLVEAG----L 59 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 +H HV I L + + Y DPRRFG M + + + + L LGPEP + F Sbjct: 60 PALKHEHVDIELESGLALR-----YTDPRRFGAM--LWSLDPHNHELLIRLGPEPLTDLF 112 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 113 DGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRAR---- 168 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG + Sbjct: 169 --YLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTTL 225 Query: 272 RRIVQAGRSTFYCTYCQK 289 R + R++ YC CQ+ Sbjct: 226 REVKLGQRASVYCPKCQR 243 >gi|124268417|ref|YP_001022421.1| formamidopyrimidine-DNA glycosylase [Methylibium petroleiphilum PM1] gi|124261192|gb|ABM96186.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylibium petroleiphilum PM1] Length = 279 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 150/300 (50%), Gaps = 33/300 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R +L+ ++ + + + K LR+ S G++++DV+RR KYL Sbjct: 1 MPELPEVEVTRLSLVDRLRGAEIAGVRVG-KPLRWPLGCAPSTLV-GRRLLDVNRRGKYL 58 Query: 61 LIELEG-------NLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L + +++HLGMSGS + H P +H ++ ++ Sbjct: 59 WFALGARPGVAADDGGLLLHLGMSGSLNLSTHAEPPGP-----WDHFDLATSHGL----- 108 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPP---LRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + DPRRFG V +S + + L LG EP + F A L + + +K Sbjct: 109 -LRLTDPRRFGAA--VWSSSRDEGAAGKLLAGLGVEPLEAGFTAALLHARLRGRRVAVKQ 165 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL IV G+GNIY EAL+ A + P + +L+ ++ VL A+ Sbjct: 166 ALLAGDIVVGVGNIYASEALFLAGIDPRTPGHRISLAR------CERLVDAVRAVLARAV 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+ G G FQN VYG+ GEPC + CG +RRIVQ RST++C +CQ+ Sbjct: 220 AVGGSTLRDFRDAHGLGGAFQNEARVYGREGEPC-TTCGGTVRRIVQGQRSTYFCPHCQR 278 >gi|297559195|ref|YP_003678169.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843643|gb|ADH65663.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 284 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 147/294 (50%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + LH + +R P F+A G+ RR Sbjct: 1 MPELPEVEVVRRGLAEHALGRTVGAVEVLHPRAVRRYLPGPADFAARLSGRVPTAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +++ P P H+ + L + T+ + + Sbjct: 61 KYLWLVLDNGEMLLTHLGMSGQMLVQ------PEGKPDERHLRVRLPLSDGTE---LRFV 111 Query: 118 DPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + + ++ P + + +P D F A + + +K ALL+Q + Sbjct: 112 DQRTFGHLMVDVPGVREDVPSSVDHIALDPLDPDFVAEDFVRALRARRTEVKRALLDQSL 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R TR L +L+ + +V+ +A++ GG++ Sbjct: 172 ISGVGNIYADEALWRSRLHWARSTRELSDAEAV------ELLGHVGQVMNEALEVGGTTF 225 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF+ + YG+ PC CG +I R RS++ C CQ+ Sbjct: 226 DGLYVNVNGESGYFERGLNAYGRRDRPC-GRCGALIVREAFMNRSSYSCPTCQR 278 >gi|311739749|ref|ZP_07713584.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305565|gb|EFQ81633.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + + R N D P S GK++ V+RR K Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEP--LSGLLIGKEVAAVARRGK 58 Query: 59 YLLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +E G S + +HLGMSG I T + H ++ L+ Sbjct: 59 FMWLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTT-------DSPHLRISAQLSGGVE--- 108 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG+ L + + +G +P + F+ + + K + +K AL Sbjct: 109 --LSFVDQRTFGYW------LYAPWAKISHIGIDPLEPDFDIVATARRLRAKKTAVKTAL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ Sbjct: 161 LDQTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLEAAQEVMAAALKV 214 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 215 GGTSFDSLYVNVNGESGYFSRSLAAYGRAGQPC-QRCGTPLERCVISGRSTHFCPHCQ 271 >gi|224476780|ref|YP_002634386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421387|emb|CAL28201.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 290 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/310 (35%), Positives = 159/310 (51%), Gaps = 41/310 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-----CLHRKNL-------RFDFPHHFSAATRGK 48 MPELPEVE ++R + ++ N + ++ ++ K + + D P F + G Sbjct: 1 MPELPEVEHVKRGIEPLVLNQRIEEVEFSNAVINGKEIGKDTIIKQIDLPM-FKLYSEGY 59 Query: 49 KIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLT 104 KI V RR+KY+L +E N ++ HLGMSG F + T + N +H HV L+ Sbjct: 60 KITRVERRSKYILFHIETNDDQRVLVSHLGMSGGFFVVDTLDDIIVPNYKKHWHVNFKLS 119 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ----- 159 N ++IY+D RRFG ++ + + + PEP D + A + HQ Sbjct: 120 NGK-----QLIYSDIRRFG--EIKNVADLSAHSSFSDMAPEPFDENAFA-HFKHQLETKT 171 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 +HKK +K +L+ K++AG GNIY CEAL+ AK++P R SL N+ K ++ Sbjct: 172 YHKKP--IKQVILDHKVIAGCGNIYACEALFNAKINPERSADSL--NDDEQK----RVFD 223 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 E+ KVL I+ GG+S+ Y H DG G QN VY K P CG I+ V AGR Sbjct: 224 EVVKVLRLGIENGGTSISSYRHADGKTGQMQNYLQVYKKKVCPV---CGGPIQTKVIAGR 280 Query: 280 STFYCTYCQK 289 +T YC CQK Sbjct: 281 NTHYCPQCQK 290 >gi|307708605|ref|ZP_07645069.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] gi|307615354|gb|EFN94563.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] Length = 274 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTNLDEFQKEVPGQIVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYND 118 L L + +I HL M G + P + P+ H HV + ++Y D Sbjct: 61 LFCLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFQFEDGGT-----LVYED 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M+L L Y + LGPEP++ F+ K +K+ LL+Q +VA Sbjct: 109 VRKFGTMELFAPDLLEAYFISKKLGPEPSEQEFDLQVFQAALAKSKKPIKSHLLDQTLVA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Sbjct: 169 GLGNIYVDEVLWRAQVHPARPSQTLTTEEAS------AIHDQTISVLGQAVEKGGSTIRT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY K G+ C + CG +I ++ GR T +C CQ+ Sbjct: 223 YTNAFGEDGTMQDFHQVYDKAGQEC-ARCGTVIEKMQLGGRGTHFCPNCQR 272 >gi|146386274|gb|ABQ23941.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis] Length = 273 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTIKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ P++ H T ++Y D R Sbjct: 61 IFHFT-DLVMVSHLRMEGKYLLFEGGI------PENKHFH---FFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L K + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASEL------KKAEVKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|145590096|ref|YP_001156693.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048502|gb|ABP35129.1| DNA-(apurinic or apyrimidinic site) lyase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 278 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 157/296 (53%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + + ++ T++ I + LR+ P G+KI ++RR KYL Sbjct: 1 MPELPEVEVTKLGIAPHLQGRTISAIKVIDGRLRWPVPKSLPQILPGQKIQSIARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE +++HLGM+G+ + +S +P+K H+ VT + + +DPR Sbjct: 61 LLELEKG-CLLIHLGMTGTLRVLPSS--EPLK--LHDRVTFEFG------RLSLRLHDPR 109 Query: 121 RFGFMDLVETSLKYQY---PPLRTLGPEPADNSFNAIYLT---HQFHKKNS-NLKNALLN 173 +FG + L +K P L LG EP ++F T +Q +K S +K LL Sbjct: 110 KFGAV-LWHPKIKGPVESNPLLLKLGVEPFSSAFEGELGTGILYQASRKRSVAVKQFLLA 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + V G+GNIY E+L+ A + P + L + + +L ++ +L AIDAGG Sbjct: 169 GQAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQCS------RLASAVRSILKKAIDAGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+L+D+V+ DG G+F VY + G PC C I++IVQ RST++C CQK Sbjct: 223 STLKDFVNSDGDPGHFTVQSKVYDRKGLPC-KVCKTPIQQIVQGQRSTYFCPVCQK 277 >gi|225856628|ref|YP_002738139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] gi|225725435|gb|ACO21287.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] Length = 274 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 148/293 (50%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L +++ K ++ +I H K ++ D F + I + RR K Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYH-KMIKTDL-EEFQRELPSQIIESMGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIY 116 YLL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 59 YLLFCLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFRFEDGGT-----LVY 106 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q + Sbjct: 107 EDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTL 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++ Sbjct: 167 VAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATA------IHDQTIAVLGQAVEKGGSTI 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 221 RTYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|253752113|ref|YP_003025254.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|253753938|ref|YP_003027079.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|253755187|ref|YP_003028327.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251816402|emb|CAZ52033.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|251817651|emb|CAZ55399.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251820184|emb|CAR46549.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|319758489|gb|ADV70431.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14] Length = 275 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ +I HL M G + A + +H H + + + ++Y D R Sbjct: 61 LIYLTDHV-LISHLRMEGKY----NFFADQVPANKHFHAFFTFIDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L D + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQL------STDQVADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|159036824|ref|YP_001536077.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] gi|189044672|sp|A8M661|FPG_SALAI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157915659|gb|ABV97086.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] Length = 287 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 145/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + ++ + H + +R HF+ G + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ P P H+ + + + R + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQ------PGAAPDEAHLRVRFRFADDGPELRFV-- 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSAGGAEMPTE-IAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQTLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R +G +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRARLHGARPA------DGLTGPAALRLLGHVRDVLGEAIKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG +RR RS++ C CQ Sbjct: 226 ALYVNVNGESGYFDRALNVYGRADQPC-RRCGTPVRREAFMNRSSYSCPRCQ 276 >gi|228478179|ref|ZP_04062787.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] gi|228249858|gb|EEK09128.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] Length = 273 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSVEVKVPKMIKTSYDSFLHDLPGLTVQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ + +H H+ +L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLL----FTDQVPANKHFHLFFTLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F +K+ LL QK+VAG+ Sbjct: 111 KFGTFDLLAKNQEEVYFARKKLGPEPTKKAFKYAPFERALMTSAKPIKSLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPAREL------SKAAMKRVHDRTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|332202825|gb|EGJ16894.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41317] Length = 274 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|149019561|ref|ZP_01834880.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] gi|147930936|gb|EDK81916.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] Length = 274 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQIHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|227543197|ref|ZP_03973246.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181006|gb|EEI61978.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 273 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L +++ + V+ LH + R + G++I RR K+ Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAARST--EALAPRLAGREICGTGRRGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L+G ++++HL MSG I T A+P+ H + L T V + D Sbjct: 59 LWLVLDGAEALVIHLRMSGQMRITQT--ARPVS--PHTRIVAELDGLT------VQFVDQ 108 Query: 120 RRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG L E L P L + P+ D S + + + LK ALLNQ IV+ Sbjct: 109 RTFGSWSLSE--LVDGLPVTLAHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVS 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LWRA+L P R+TRS + + L +L+ Q V+ DA+ GG+S + Sbjct: 167 GIGNIYADEMLWRARLHP-RQTRSHVSPH-----RLTELLLAGQDVMRDALAQGGTSFDE 220 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 221 LYVNVNGESGYFDRSLNAYGKAGLPC-DRCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|149006353|ref|ZP_01830065.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|168485922|ref|ZP_02710430.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225861143|ref|YP_002742652.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298229554|ref|ZP_06963235.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254477|ref|ZP_06978063.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503020|ref|YP_003724960.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|147762130|gb|EDK69092.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|183570931|gb|EDT91459.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225727344|gb|ACO23195.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298238615|gb|ADI69746.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|327389248|gb|EGE87593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA04375] gi|332075586|gb|EGI86054.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17545] Length = 274 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|33860886|ref|NP_892447.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931224|sp|Q7V2X4|FPG_PROMP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633828|emb|CAE18787.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 292 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 43/312 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL------RFDFPHHFSAATRGKKIIDVS 54 MPELPEVE +RR L +KN + + + R++ + DF + + + Sbjct: 1 MPELPEVETVRRGLEQKLKNFIIKRVEICRESTVAYPIDKIDFIEGLQNSL----LYKWN 56 Query: 55 RRAKYLLIELEGNLS---------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 RR KYL+ EL+ +S ++VHL M+G F +T + NP H Sbjct: 57 RRGKYLIAELKKTVSNNNDANEISFVENGVLVVHLRMTGYFTFNNT-----LTNPCK-HT 110 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLT 157 I L +N N + + Y D R FG M V L L TLGPEP SFN YL Sbjct: 111 RIRLFDNNNNE---LRYIDVRSFGQMWWVRDGLSPNNIIKGLGTLGPEPFSESFNVNYLK 167 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 K ++K+ LL+Q I+AGIGNIY E+L+ A +SP R+ R++ +N + +L Sbjct: 168 KVISNKTRSIKSILLDQTIIAGIGNIYADESLYSAGISPFREARTINKNE------IKRL 221 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + + VL +I AGG++ D+ ++G G F +VY +TG+ C C +I R + Sbjct: 222 RRAVVDVLKKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKC-RQCKNLIERQKIS 280 Query: 278 GRSTFYCTYCQK 289 GRST +C CQK Sbjct: 281 GRSTHWCRKCQK 292 >gi|225728858|ref|YP_002735122.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] gi|222113497|emb|CAR41256.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] Length = 273 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTVKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ P++ H T ++Y D R Sbjct: 61 IFHFT-DLVMVSHLRMEGKYLLFEGGI------PENKHFH---FFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L K + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASEL------KKAEVKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|148998594|ref|ZP_01826034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|168575632|ref|ZP_02721568.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|307067627|ref|YP_003876593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] gi|147755592|gb|EDK62639.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|183578675|gb|EDT99203.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|306409164|gb|ADM84591.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] Length = 274 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDTYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|148992895|ref|ZP_01822514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|168490211|ref|ZP_02714410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|147928347|gb|EDK79363.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|183571439|gb|EDT91967.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|332073303|gb|EGI83782.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17570] Length = 274 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARSSQTLTAEEATA------IHDQTIAVLNQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|332285378|ref|YP_004417289.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] gi|330429331|gb|AEC20665.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] Length = 258 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 23/276 (8%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M + + ++ +R+ P +A G K++ RR KYLLI E II HLGMS Sbjct: 1 MTGKQLKNFVVYEPRMRWPIPDGLAATISGHKVLSCERRGKYLLINFEHGTQII-HLGMS 59 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG---FMDLVETSLKY 134 GS S A+ +H+H + R + +DPRRFG + D + + Sbjct: 60 GSLRRVPASEARR----KHDHAEWIFDDA------RFLLHDPRRFGAVLWHDAAQGPVA- 108 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 +P L LG EP D F + YL + + +K LL IV G+GNIY E+L+ A++ Sbjct: 109 NHPLLAKLGIEPFDAQFTSSYLYERLRGRTQAIKQTLLAGDIVVGVGNIYASESLFLARI 168 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAF 253 +P SL + L+Q IQ L +A+++GGS+LRDYV+ G G YF Sbjct: 169 NPRTAAGSLSRAR------CQALMQAIQITLRNALESGGSTLRDYVNATGEPGAYFALHS 222 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +VY K+G+PC C I+RI+Q R+T+YC CQ+ Sbjct: 223 AVYEKSGQPC-QLCATPIKRIIQGQRATYYCPKCQR 257 >gi|15902916|ref|NP_358466.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116515925|ref|YP_816340.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|148988414|ref|ZP_01819861.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|168491059|ref|ZP_02715202.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225858763|ref|YP_002740273.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|29611712|sp|Q8DQ33|FPG_STRR6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15458476|gb|AAK99676.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116076501|gb|ABJ54221.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|147926095|gb|EDK77169.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|183574637|gb|EDT95165.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225720028|gb|ACO15882.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|332076244|gb|EGI86710.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41301] Length = 274 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|171060164|ref|YP_001792513.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] gi|238689107|sp|B1Y3P5|FPG_LEPCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170777609|gb|ACB35748.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] Length = 276 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 151/298 (50%), Gaps = 32/298 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ R L+ + TV + L K LR+ P + G++I +++RR Sbjct: 1 MPELPEVEVTRLGLVDRIGGATVRALQLG-KPLRWPIGVAPQQLA----GQRIGELARRG 55 Query: 58 KYLLIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KY+ + L+ + ++ HLGMSGS E P P H+HV + T + Sbjct: 56 KYIWMPLQDGSTPAGGLLWHLGMSGSLRFEAQ---LPPPGP-HDHVELV------TDRGS 105 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + DPRRFG + + SL+ L LG EP ++ F A L + +K AL Sbjct: 106 LRLTDPRRFGAV-VWSPSLQAGCAARLLGGLGVEPLEDGFTASVLHQGLRGRRVAIKQAL 164 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L IV G+GNIY EAL+ A + P + L +L+Q I++VL A+ A Sbjct: 165 LAGDIVVGVGNIYCSEALFVAGIDPRLAAQRLSLAR------CERLVQAIRQVLRQALMA 218 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+ G G FQ VY + +PC CG ++RRIVQ R+T++C CQ+ Sbjct: 219 GGSTLRDFRDAHGMGGAFQLQAQVYDRADQPC-RRCGALVRRIVQGQRATYFCPVCQR 275 >gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] Length = 286 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 154/291 (52%), Gaps = 19/291 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + T+ ++ LH + +R F+A +G + RR KYL Sbjct: 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + + S++ HLGMSG +++ A + +H + IS ++ T+ + + D Sbjct: 61 WLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGTE---LRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L + + + + +P D +F+ K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T SL + P+ +L+ I+ V+ A+ AGG+S Sbjct: 174 VGNIYADEALWRARLHYERPTASLTR----PRSA--ELLGHIRDVMNAALAAGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 277 >gi|256397116|ref|YP_003118680.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] gi|256363342|gb|ACU76839.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] Length = 290 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 28/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV LH + +R D P F+A G ++ RR Sbjct: 1 MPELPEVEVVRRGLERWAVGRTVAAAEVLHPRAIRRHPDGPEDFAARAAGLTLLSAERRG 60 Query: 58 KYLLIEL-EGNLSI----IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + L EG S+ HLGMSG +++ P P H+ I T + + Sbjct: 61 KFLWLPLGEGETSVGEAVTGHLGMSGQLLLQ------PSGTPDEKHLRIRFTFADDGPEL 114 Query: 113 RVIYNDPRRFGFMDL--VETSLKYQYPPLRT--LGPEPADNSFNAIYLTHQFHKKNSNLK 168 R + D R FG M L +E + P + + D F+ + + ++N+ LK Sbjct: 115 RFV--DQRTFGGMALEKLEHDRQGVVVPASVVHIARDVLDPEFDVDFFHSELRRRNTGLK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q V+GIGNIY EALW A+L R T + + + ++++ ++V+ A Sbjct: 173 RALLDQTRVSGIGNIYADEALWIARLHYDRPTSKMRRPDTD------RVLEAAREVMTAA 226 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G GYF + YG+ GEPC CG I+R RS+++C C Sbjct: 227 LAVGGTSFDSLYVNVNGESGYFARSLHAYGREGEPC-ERCGTPIKRESFMNRSSYFCPKC 285 Query: 288 QK 289 Q+ Sbjct: 286 QR 287 >gi|313201757|ref|YP_004040415.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] gi|312441073|gb|ADQ85179.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] Length = 262 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/266 (32%), Positives = 138/266 (51%), Gaps = 18/266 (6%) Query: 23 VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 V + + LR+ P + + ++RRAKY+L + + +++HLGMSG + Sbjct: 12 VAKVIIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYILAQFDTGY-LLLHLGMSGRICL 70 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 A+ +H+H + + + DPRRFG + L + Q+ L L Sbjct: 71 ----LAQDEPAAKHDHFDLHFADGQVLR-----LRDPRRFGAV-LWAGADPAQHALLNVL 120 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GPEP +++F+ +L QF +++ +KNA+++ +V G+GNIY E+L+RA++ P Sbjct: 121 GPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGVGNIYASESLFRARIHPQTPANQ 180 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 L + +L EI+ L DA+ AGGSSLRD+ DG+ GYFQ + Y +TGE Sbjct: 181 L------SRQACDRLAAEIKATLTDALAAGGSSLRDFFGADGNPGYFQQEYFTYARTGEA 234 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQ 288 C C I+ + RSTF+C CQ Sbjct: 235 C-KICSTPIQNVRLGQRSTFFCPRCQ 259 >gi|311110325|ref|ZP_07711722.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] gi|311065479|gb|EFQ45819.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] Length = 254 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/250 (33%), Positives = 128/250 (51%), Gaps = 15/250 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPKG----KHEHVEFIFTDGTALR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P+ +++ P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHPLSSAKAI------PADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQ 250 +G IG +Q Sbjct: 226 DANGEIGGYQ 235 >gi|213583920|ref|ZP_03365746.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 213 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 19/232 (8%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL+EL II+HLGMSGS I ++ + +H+HV + ++N + Y Sbjct: 1 KYLLLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YT 50 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K+V Sbjct: 51 DPRRFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLV 108 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+ Sbjct: 109 VGVGNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLK 162 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 163 DFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 213 >gi|290580027|ref|YP_003484419.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] gi|254996926|dbj|BAH87527.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] Length = 272 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIAGKKIVSVEVRVPKMVKTGVEDFQLGILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNLN-RQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC + C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPC-ARCATPIEKIKVGGRGTHFCPSCQK 272 >gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|81679878|sp|Q5YS09|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 294 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 32/298 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATR--GKKIIDVSRRA 57 MPELPEVE++RR L + V + + H +++R A R G+++ RR Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60 Query: 58 KYLLI---------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL + E + +++VHLGMSG +++ A P++ +H H+ +L + + Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQ--PAAAPVE--KHAHIRAALDDGSE 116 Query: 109 TKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + D R FG L E P+ + +P D F+A + KNS Sbjct: 117 LR-----FVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIRAKNS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +V+GIGNIY E+LWRA ++ R +G + + +L+ E++ V+ Sbjct: 172 EIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLA------SGLTRPAVRRLLAEVRAVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++A+ AGG+S YV+++G GYF+ A +VYG+ EPC CG I R RS++ Sbjct: 226 LEALAAGGTSFDALYVNVNGQSGYFERALAVYGRQDEPC-RRCGAPIVREKFMNRSSY 282 >gi|303327976|ref|ZP_07358415.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] gi|302861802|gb|EFL84737.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] Length = 285 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 151/314 (48%), Gaps = 54/314 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS---AATRGKKIIDVSRRA 57 MPELPEVE + R L ++ + + LR H S A G++I DV RR Sbjct: 1 MPELPEVETVARTLRPQVQECLIEGA----EVLRSGSLHPLSLPPATLAGRRIADVGRRG 56 Query: 58 KYLLIELEGNLS-----------IIVHLGMSGSFII--------EHTSCAKPIKNPQHNH 98 K LL+ L S + VHL M+G ++ HT C ++ P + Sbjct: 57 KLLLVHLAPPESGRTPEETAPDLLAVHLRMTGRLMVYAPGTPPGSHTRCVFDLRTPDGD- 115 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIY 155 + R+ ++D R FG + + + R LGPEP + F A+ Sbjct: 116 ------------RRRLFFDDTRAFGLVLAATPEILQAWDFWRELGPEPLEIGEREFAAL- 162 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + LK LL+QK++AGIGNIY E+L++A L P RK SL Sbjct: 163 ----LRSRGAALKAVLLDQKVIAGIGNIYADESLFQAGLDPRRKASSLSPAQS------R 212 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L+ ++ VL +I GSS+RDY +G +G FQN+F+VYG+ G C+ CG+ +++I Sbjct: 213 CLLAALKDVLRRSIAQCGSSIRDYRDANGDVGAFQNSFAVYGRGGAACV-RCGRPLQKIR 271 Query: 276 QAGRSTFYCTYCQK 289 AGR+T C +CQK Sbjct: 272 VAGRATVCCPHCQK 285 >gi|15900847|ref|NP_345451.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|111657968|ref|ZP_01408675.1| hypothetical protein SpneT_02000857 [Streptococcus pneumoniae TIGR4] gi|149010384|ref|ZP_01831755.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182683916|ref|YP_001835663.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|303254437|ref|ZP_07340543.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|303259882|ref|ZP_07345857.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|303262296|ref|ZP_07348240.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|303264718|ref|ZP_07350636.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] gi|303267325|ref|ZP_07353185.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|303269130|ref|ZP_07354909.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|21362546|sp|Q97R61|FPG_STRPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14972445|gb|AAK75091.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|147764865|gb|EDK71794.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182629250|gb|ACB90198.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|301801813|emb|CBW34524.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV200] gi|302598604|gb|EFL65644.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|302636619|gb|EFL67110.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|302639087|gb|EFL69547.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|302641317|gb|EFL71685.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|302643135|gb|EFL73422.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|302645805|gb|EFL76034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] Length = 274 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|301794108|emb|CBW36514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV104] gi|332204973|gb|EGJ19038.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47901] Length = 274 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRCLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|93117335|gb|ABE99585.1| fpg [Neisseria meningitidis] Length = 239 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 135/246 (54%), Gaps = 13/246 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ TV + L + LR+ G++++ RRAKYL++ + + +++HLGMS Sbjct: 6 IEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTGI-LLIHLGMS 64 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS I S + ++ +H+HV I ++ T + Y DPR+FG + E ++ +P Sbjct: 65 GSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GIEEHHP 118 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+RA +SP Sbjct: 119 LLEKLGPEPLLEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAGISPH 178 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R N K L++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG Sbjct: 179 RPA------NRLKKKECALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQEYTVYG 232 Query: 258 KTGEPC 263 + +PC Sbjct: 233 RHNQPC 238 >gi|239928704|ref|ZP_04685657.1| formamidopyrimidine-DNA glycosylase [Streptomyces ghanaensis ATCC 14672] gi|291437028|ref|ZP_06576418.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] gi|291339923|gb|EFE66879.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] Length = 286 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L + + TV + LH + +R DF H G +I Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLE----GHRIGTA 56 Query: 54 SRRAKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTK 110 RR KYL + LE + S++ HLGMSG +++ P P H+ I + ++ +T+ Sbjct: 57 DRRGKYLWLPLEDTDQSVLAHLGMSGQLLVQ------PHDAPDEKHLRIRVRFADDLHTE 110 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + L +T+ + + +P D F+ +K + +K A Sbjct: 111 ---LRFVDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRA 167 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++G+GNIY EALWRA++ T + P+ +L L+ ++ V+ A+ Sbjct: 168 LLDQSLISGVGNIYADEALWRARIHYESPTAGFTR----PRTLL--LLGHVRDVMNAALA 221 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 222 VGGTSFDSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPVRRRPWMNRSSYFCPKCQR 280 >gi|332522287|ref|ZP_08398539.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] gi|332313551|gb|EGJ26536.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] Length = 273 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 141/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ V + + + F++ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVIGKVVASVTVKVPKMIVSNSETFASDLIGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +I HL M G +++ P++ H T ++Y D R Sbjct: 61 IFNFS-DLVMISHLRMEGKYLLFEDGI------PENKHFH---FFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F +K LL QK+V G+ Sbjct: 111 KFGTLELLARDGLDLYFSQRKLGPEPTKNEFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID-AIDAGGSSLRDY 239 GNIYV E LW AK+ P+R +L K + K I + V+++ A++ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLASNL-------KKVEMKRIHDQTIVILNFAVNKGGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG +I +I GR T +C CQK Sbjct: 224 QNTLGMNGSMQDYLQVYGQNGRPC-PRCGTVIEKIKVGGRGTHFCPKCQK 272 >gi|300858756|ref|YP_003783739.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686210|gb|ADK29132.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302206462|gb|ADL10804.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] gi|302331017|gb|ADL21211.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308276704|gb|ADO26603.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 285 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 153/298 (51%), Gaps = 24/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +T + + H + R+ P A RG+ + V RR Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGGPQELEARLRGRVLSSVHRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + +++VHLGMSG +I+ + H H I + ++ +++ + + Sbjct: 61 KFLWFVLDDSCALMVHLGMSGQMLIKQADASL------HPHTRIRCSLSSGSEQSELWFV 114 Query: 118 DPRRFGFMDLVETSLKYQY-----PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D R FG+ + E L Y + P+ + + + + + + K+ +K LL Sbjct: 115 DQRTFGYWRIAE--LVYSHNRLVPKPMAHIAADLLEPAQDLMATARLIKTKHLEIKRLLL 172 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQ+IVAGIGNIY E LW A++ P +K L ++ L+ E Q+V+ +A+ G Sbjct: 173 NQEIVAGIGNIYADEMLWSAQIHPRQKAHRL------SLRAIHSLLNEGQRVMHNALLQG 226 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S YV+++G GYF + YG+ G PC + CG + R + RS+ +C CQ+ Sbjct: 227 GTSFDSLYVNVNGESGYFDVSLQAYGQEGMPC-TRCGTALVREKFSNRSSHFCPRCQR 283 >gi|296393288|ref|YP_003658172.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] gi|296180435|gb|ADG97341.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] Length = 283 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 147/296 (49%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + LH ++ R +AA + + V RR Sbjct: 1 MPELPEVEVVRRGLAEHLTGARIRALRVLHPRSARRHPGGGAFLAAALSERDVRAVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ S+++HLGMSG F + NP H V L + + + Sbjct: 61 KYLWLVLDDEESVVIHLGMSGQFRVGDQGVPG---NPAHLRVEADLADGRTLQ-----FF 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG F L E + P+ + +P D F+ + + K S +K LL+Q Sbjct: 113 DQRTFGGWEFAALQEVDGELVPAPVAHIARDPFDPKFDPAAVARRVRAKRSAIKRVLLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY E+LWRA+L + L +P+ +L+ + VL ++I GG+ Sbjct: 173 TVLSGVGNIYADESLWRARLHGEQPAAGL-----SPRKT-AELLDALAVVLGESITEGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G F + +VYG+ G+PC CG IRR RS+ YC CQ+ Sbjct: 227 SFDSLYVNVNGESGRFSDWLAVYGQEGKPC-RRCGSAIRREAFMNRSSHYCPRCQR 281 >gi|312194941|ref|YP_004015002.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] gi|311226277|gb|ADP79132.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] Length = 312 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 101/320 (31%), Positives = 146/320 (45%), Gaps = 48/320 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + LH + +R F+ G+ + RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRTIATVTVLHPRAVRRHTGGAADFAGVLVGQTVTAARRRG 60 Query: 58 KYLLIELEGNL----------------------------SIIVHLGMSGSFIIEHTSCAK 89 KYL + L + +++ HLGMSG ++ Sbjct: 61 KYLWLALSADPDRGPAPHPEPAGLAPAAAPLPAGPRDGDALLGHLGMSGQLLV------V 114 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P P H+ I LT ++ R + D R FG M LV+ P+ + +P D Sbjct: 115 PPSAPDQTHLRIRLTFTDGGRELRFV--DQRTFGHM-LVDEGGAALPAPMAHIARDPLDP 171 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 F+ + + LK ALL+Q +V+GIGNIY EALW A+L R T +L + Sbjct: 172 LFDDTAFVAGLAARRTGLKRALLDQGLVSGIGNIYADEALWAARLHYARPTETLRGTDA- 230 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +L+ E++ VL A+ AGG+S R YV +G G F+ + YG+ G PC S CG Sbjct: 231 -----RRLLAEVRTVLTAALAAGGTSFDRLYVSTEGVSGLFERELTAYGRAGLPC-SRCG 284 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 IRR RS+F C CQ Sbjct: 285 SPIRRDSFMNRSSFSCPTCQ 304 >gi|258424105|ref|ZP_05686987.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] gi|257845726|gb|EEV69758.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] Length = 290 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKTQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG M V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEMRNVASVA--SYPSFLEIAPEPFTNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|297622481|ref|YP_003703915.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] gi|297163661|gb|ADI13372.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] Length = 267 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 20/243 (8%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G++I+ V+RR K+L++ L G +I+HLGM+G P P+H V + L+ Sbjct: 36 GQRILAVTRRGKFLILPLSGGDDLIIHLGMTGIL--------SPEPAPKHVRVRLELSEG 87 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + D RRFG +V + P L +GPEP +F L + + Sbjct: 88 GA-----LYFRDARRFGRFLVVPSGAYEALPTLSAMGPEPLSAAFTGDALYRALQRSRTP 142 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+QK V+G+GNIY EALWRA++ P L N + +L I++VL Sbjct: 143 IKPFLLSQKPVSGVGNIYADEALWRARIHP------LTPANEVSRAKAAQLAGAIREVLA 196 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++ A G++L+DY ++G +G + YG+ +PC CG +R++ GR T +C Sbjct: 197 ASLRAKGTTLQDYRTVNGEVGAYALQLQAYGRAEKPC-PRCGSPLRKVTLGGRGTHFCAR 255 Query: 287 CQK 289 CQ+ Sbjct: 256 CQR 258 >gi|84498323|ref|ZP_00997120.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84381823|gb|EAP97706.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 290 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 148/299 (49%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRA 57 MPELPEVE++RR L V+ T + R P A R G I RR Sbjct: 1 MPELPEVEVVRRGLADHVVGRRIATAAFTGARVARRHVPGPIDLAERIVGLDITQARRRG 60 Query: 58 KYLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + L E +I HLGMSG ++E P H+ T + R Sbjct: 61 KYLWLVLGHDGEPVHGLIAHLGMSGQLLVEAADA------PDEKHLHARFTFADGDPELR 114 Query: 114 VIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG DL + + +Q +R + P+P + +++ + + + +S +K Sbjct: 115 FV--DQRTFGGFALDDLADDGVPHQ---IRHIAPDPFELAYDQVAVVRRIKASDSAIKRM 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 +L+Q +V+GIGNIY EALWRAK+ R + SL K ++ +++ ++V+ A+ Sbjct: 170 ILHQGVVSGIGNIYADEALWRAKVHGERPSSSLT------KPVIARVLDHAREVMAAALI 223 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + YG+ GEPC + CG IRR RS+F C CQ Sbjct: 224 EGGTSFDALYVNVNGASGYFDRSLHAYGQEGEPC-ARCGTPIRREHFMNRSSFSCPTCQ 281 >gi|258404392|ref|YP_003197134.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] gi|257796619|gb|ACV67556.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] Length = 274 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 138/293 (47%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + + + L R + G+ I V RRAK L Sbjct: 1 MPELPEVETIARGLDAALTGQHIASVHLRRDAVACGDAQRIREDVPGRCIKRVWRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++ HL MSG ++ P+ Q HV + ++ D R Sbjct: 61 LVDCVPDRHLVFHLKMSGKLLL-----GGPLAG-QEKHVQAWFGLQSGES---FVFQDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG++ L + + ++P +LGPEP D + + + +K+ LL+Q ++AGI Sbjct: 112 KFGYIRLFDGAELAKWPFFASLGPEPFD--LDGPGFARILSGRRARIKSLLLDQTVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD-----ILYKLIQEIQKVLIDAIDAGGSS 235 GNIY EAL+RA + P TP D L +L+ + L +GGSS Sbjct: 170 GNIYADEALFRAGIHP-----------ATPADRLSPGALNRLVYALHAALNKGFASGGSS 218 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LRDYV G G QN F VYG+ G C CG+ + R AGR++ +C CQ Sbjct: 219 LRDYVDALGKRGSHQNEFQVYGRCGASC-PCCGRCLERTTVAGRTSTFCPRCQ 270 >gi|126695693|ref|YP_001090579.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9301] gi|166198727|sp|A3PB53|FPG_PROM0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126542736|gb|ABO16978.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9301] Length = 292 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 107/311 (34%), Positives = 153/311 (49%), Gaps = 41/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKK---IIDVSRRA 57 MPELPEVE +RR L + N + + + R + +P + +G K I RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDST-VAYPSNKEEFIKGLKNSLIYKWDRRG 59 Query: 58 KYLLIEL---------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVT 100 KYL+ +L + N ++VHL M+G F K I+N H H Sbjct: 60 KYLIAQLKEVQNENTEFPLENSQNNGFLVVHLRMTGYF--------KFIENSTHPCKHTR 111 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 I + N + + Y D R FG M + + S+ L +LGPEP FNA YL Sbjct: 112 IRFFDKNNNE---LRYVDVRSFGQMWWINKDLSINKVIKGLGSLGPEPFSKDFNANYLKE 168 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL Sbjct: 169 AISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLK 222 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + I VL +I +GG++ D+ ++G G F +VY +TG C CG +I R G Sbjct: 223 KSIVIVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGREC-RKCGNLIERQKITG 281 Query: 279 RSTFYCTYCQK 289 RST +C CQK Sbjct: 282 RSTHWCPNCQK 292 >gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc argentinum KCTC 3773] Length = 280 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 139/295 (47%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L + F R + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQITQVKLPYPKVITGDSQAFITGVRNAYFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDP 119 L+ L +I+ HL M G + +E PI H H I + RV+ YND Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVE------PIDATPHKHTEIIFELADD----RVLFYNDT 110 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG M L T+ + P L LGPEP + +F + +K+ LL+Q +A Sbjct: 111 RRFGRMVLATTNQETLAVPALGKLGPEPTAQDLTLADMVAKFARSKKPVKSFLLDQTQIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAGG 233 GIGNIY E LW++K+ P TP ++L + L Q I + AI+ G Sbjct: 171 GIGNIYADEVLWQSKIHP-----------ETPANLLSEMQLATLRQNIISEMARAIEHHG 219 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++ + ++ G +G FQN YG+ +PCL CG + +I R T +C CQ Sbjct: 220 TTVHSFSNVFGEVGQFQNELQAYGRVDQPCL-RCGTPLVKIKVGQRGTTFCPVCQ 273 >gi|24379994|ref|NP_721949.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] gi|26006954|sp|P55045|FPG_STRMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24377981|gb|AAN59255.1|AE014992_10 putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] Length = 273 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNL-NRQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQL------KKSEIKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC + C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPC-ARCATPIEKIKVGGRGTHFCPSCQK 272 >gi|227833426|ref|YP_002835133.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|262184416|ref|ZP_06043837.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|254789433|sp|C3PH91|FPG_CORA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227454442|gb|ACP33195.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 282 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 148/298 (49%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V ++ ++ R N + P SA G+KI V+RR K Sbjct: 1 MPELPEVESVRRGLEPYVVGRSFAAVEVHHPRANRGQEAP--LSALLVGRKIAAVARRGK 58 Query: 59 YLLIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ +E + +HLGMSG I + +P HV I+ + T Sbjct: 59 FMWLEFADEDHSDPARDVLFIHLGMSGQVRIGE------VDSP---HVRIAAVLDDTT-- 107 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 R+ + D R FG+ L + + + P+P + F+ + K + +K AL Sbjct: 108 -RLSFVDQRTFGYWRL------GPWLSMAHIAPDPLETDFDLTAAGRRLRAKRTVVKAAL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY EALW ++SP++K +L Q + +I V+ A+ Sbjct: 161 LDQTVLSGVGNIYADEALWAVQISPLKKASALRQRDAV------AVISAAADVMRAALAV 214 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + VYG+ G+PC CG+ I + V GR T YC CQ Sbjct: 215 GGTSFDALYVNVNGESGYFDRSLHVYGRGGQPC-ERCGEEILKTVLGGRGTHYCPSCQ 271 >gi|302391164|ref|YP_003826984.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] gi|302203241|gb|ADL11919.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] Length = 275 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + +TD+ + + L + F G +I D+ RR KY Sbjct: 1 MPELPEVQTVVDTLTESVLKKEITDVEVKNEKLIANLEVEEFIDTLTGSRIEDIRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +++EL+ + ++ HL M+G F+ C K + +++++ N + Sbjct: 61 IIMELDTDYYLVTHLRMTGRFVY----CQKKEEVDKYDYIFFKFKGNDELR-----LGSK 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F LV LK + L LGPEP + F + +K LLNQK +AG Sbjct: 112 RKFTRTYLV-ADLK-EAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPLLLNQKFLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ +++ P+R +L + KL Q IQ+VL + I+ G++ DY Sbjct: 170 LGNIYVDEALFISQIHPLRTADTLTDQE------IKKLYQAIQQVLAEGIEHRGTTKWDY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V G G +QN VY + GE C + C ++++I GR T++C CQ+ Sbjct: 224 VDASGEAGSYQNYLRVYDRKGEEC-NRCAAILKKIKVGGRGTYFCPQCQE 272 >gi|148984712|ref|ZP_01817980.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|147923103|gb|EDK74218.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|301799946|emb|CBW32529.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae OXC141] Length = 274 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFCLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFRFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|148652194|ref|YP_001279287.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] gi|148571278|gb|ABQ93337.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] Length = 307 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 55/323 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++K V + +++ LR+ P +G + V RRAKYL Sbjct: 1 MPELPEVETTKTSLKPLLKKQ-VAQVDVYQPKLRWPVPDDIHR-LQGYTLQQVERRAKYL 58 Query: 61 LIELE----------GNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 +++ + N+ SII+HLGMSGS K +H+H+ + + Sbjct: 59 ILQFQRLPSQSGAKTANMPDTKSIIIHLGMSGSLQQFPVGTDKR----KHDHLIMQYKAD 114 Query: 107 TNTKKYRVIYNDPRRFG----FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 ++ Y+DPRRFG F D E + LG EP D+ F+ YL + H+ Sbjct: 115 DTKPAIQLHYHDPRRFGAILWFDDYAEKLFDH-------LGIEPLDDQFSGDYLFDKIHR 167 Query: 163 KNSN-----------------LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 N +K +++Q++V G+GNIY E+L+ + + PI L + Sbjct: 168 VAENAIRSCHNKPLLKPISRPIKAVIMDQEVVVGVGNIYATESLFLSGIHPITPADQLSK 227 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 L +L++ I+++L +I GGS+L+D+ G+ GYFQ VYGK PC Sbjct: 228 VQ------LAELVKYIKEILKRSITQGGSTLKDFTVASGTTGYFQQTLLVYGKYKSPC-P 280 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQ 288 CG I ++V GR++ +C CQ Sbjct: 281 TCGAGIDKVVITGRASTFCPTCQ 303 >gi|170078422|ref|YP_001735060.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|34765741|gb|AAQ82445.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|169886091|gb|ACA99804.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] Length = 277 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 103/292 (35%), Positives = 146/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR LM + N T L RK L + P HF +G I D RR K Sbjct: 1 MPELPEVETVRRGLMQISLNQQFTGAEILLRKTLAYPTDPDHFLGMIQGLFIQDWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL +L ++ +HL M+G F+ T+ P++ +H + + + + + D Sbjct: 61 YLLGKLSDGSTLGIHLRMTGKFL--WTTPDVPVQ--KHTRIRFFIEGDRELR-----FVD 111 Query: 119 PRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + V T +K L LG EP F A L + K+ +K LL+Q I Sbjct: 112 LRTFGQIWWVPAGTIVKSVITGLTRLGVEPLSPDFTADLLANFCEKRQRPMKTFLLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIY EAL+++ + P RK SL + + KL + I +VL +I GG++ Sbjct: 172 ITGLGNIYADEALFKSGIHPTRKASSLKMSE------IEKLHKAIVEVLETSIAQGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V G+ G + YG+TGEPC C I RI GRST +C CQ Sbjct: 226 SDFVSTTGTNGNYGGMALTYGRTGEPC-RVCSHPIERIKLGGRSTHFCPQCQ 276 >gi|312830067|emb|CBX34909.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 290 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFTNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L ++++Y ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVYYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---RQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|146319050|ref|YP_001198762.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|146321256|ref|YP_001200967.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|145689856|gb|ABP90362.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|145692062|gb|ABP92567.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|292558695|gb|ADE31696.1| Formamidopyrimidine-DNA glycolase [Streptococcus suis GZ1] Length = 297 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 23 LPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 82 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ +I HL M G + A + +H H + + + ++Y D R Sbjct: 83 LIYLTDHV-LISHLRMEGKY----NFFADQVPANKHFHAFFTFIDGST-----LVYQDVR 132 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 133 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGL 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L D + L Q +VL I+ GGS++R Y Sbjct: 193 GNIYVDEVLFKAKVHPAQTSNQL------STDQVADLRQATIEVLQLGIEKGGSTIRTYK 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 247 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|314936208|ref|ZP_07843555.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] gi|313654827|gb|EFS18572.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] Length = 290 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 37/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-----------FSAATRGKK 49 MPELPEVE ++R + + N T+ I +K + + F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F I+ H S +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS----FNAIYLTHQFH 161 +++++D RRFG ++ + YP + PEP D FN YL+ Q Sbjct: 121 GK-----KLVFSDIRRFG--EIRNLNSFEDYPSFLEIAPEPFDEEALQHFNH-YLS-QKK 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 N +K LL+ KI+AG GNIY CEAL+RA + P RK + + + +L+ +QE Sbjct: 172 VANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKD---TSHQERQLLFYYVQE- 227 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ Sbjct: 228 --VLKEGIDNGGTSISDYRHADGKTGKMQLHLNVY---KQKTCKVCGHDIEQKVIASRNS 282 Query: 282 FYCTYCQK 289 +C YCQK Sbjct: 283 HFCPYCQK 290 >gi|221633868|ref|YP_002523094.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] gi|254789452|sp|B9L1Z5|FPG_THERP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221156330|gb|ACM05457.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] Length = 289 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 24/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L V+ V H +++ D F+ R +I+ + RR K Sbjct: 1 MPELPEVETIRRTLAPVLIGALVIGALRGEHPEDILLDPWPVFARRVRRHRIVALERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN--------NTNTK 110 YL E +++HLGM+G + H + A P K H H+ + L + + Sbjct: 61 YLAARFEDGDRLVIHLGMTGELRLSHPATA-PGK---HCHLALVLRSLRPLPPSLVDQRQ 116 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++ + Y D RRFG + L++ + + LGPEP D + + L + ++ + +K A Sbjct: 117 RFLLRYLDIRRFGRIALLDQAGWETF--TARLGPEPLDPTLDPRALWSRLRERRTAIKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY EAL++A+L P R+ ++L D + +L+ ++ VL AI+ Sbjct: 175 LLDQALLAGIGNIYADEALFQARLHPARRCQTLSL------DEVERLLVALRTVLSAAIE 228 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+++RDY G G FQ+ VYGK G PC CG + RI AGRS+ +C CQ Sbjct: 229 NAGTTIRDYRDGQGRAGSFQSRLQVYGKPAGTPC-PRCGTGLARIRIAGRSSVFCPRCQ 286 >gi|149002521|ref|ZP_01827455.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] gi|237650881|ref|ZP_04525133.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974] gi|237821332|ref|ZP_04597177.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974M2] gi|147759458|gb|EDK66450.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFYLTDKV-LISHLRMEGKYFY------YPDQGPERKHAHVFFHFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 TGLGNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLNQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|13357975|ref|NP_078249.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762015|ref|YP_001752497.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508489|ref|ZP_02958019.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|24211711|sp|Q9PQ76|FPG_UREPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|11264463|pir||B82895 formamidopyrimidine-DNA glycosylase UU413 [imported] - Ureaplasma urealyticum gi|6899401|gb|AAF30824.1|AE002138_11 formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827592|gb|ACA32854.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675912|gb|EDT87817.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 275 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N + YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKF---YYQAKEEWFNLAHTHIIIEFNNGMQLR-----YNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYEQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P +++ N T K+ K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFP-----TILAKNLTLKN-YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPC-QICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|194398197|ref|YP_002037605.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] gi|194357864|gb|ACF56312.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] Length = 274 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--HNHVTISLTNNTNTKKYRVIYN 117 LL L + +I HL M G + P + P+ H HV + ++Y Sbjct: 60 LLFCLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHVFFRFEDGGT-----LVYE 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V Sbjct: 108 DVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Sbjct: 168 AGLGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIR 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 222 TYTNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] Length = 287 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQIKQVKLPYPKVITGDSQAFVTGVLNATFHAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E A+P K H + L + + + YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPLG-AQPYK---HTEIIFELDD-----QRAIFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + L LGPEP D S Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMVLTTTDHETDEVQSLGKLGPEPTDVSLTLPYMIDIFSRSKKPVKSFLLDQNKIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANELSEIE------LATLRQNIISEMKMAIKNHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG+ + +I R T YC CQ Sbjct: 226 SNVFGEVGQFQNKLEAYGRVGQPCL-RCGEPLVKIKVGQRGTTYCPVCQ 273 >gi|323359693|ref|YP_004226089.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276064|dbj|BAJ76209.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 296 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 154/306 (50%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T D+ R R HF A G++I RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + + +I+ HLGMSG ++ + +H + I L + + V++ Sbjct: 61 KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPEE----RHERIRIELEHPVH-GPLSVVFA 115 Query: 118 DPRRFGFMD---LVET----------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 D R FG + LV+T SL + + +P D +F+ + + Sbjct: 116 DQRTFGSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRVGRTA 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q + +GIGNIY E+LW A++ P SL P + +L+ E+++V Sbjct: 176 SGIKRVLLDQTVASGIGNIYADESLWAARIHPEAVASSL------PTRAVNRLLGEVREV 229 Query: 225 LIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L A+ GG+S YV+++G GYF ++ + YG+TG+PC CG+ I R+ RS+ + Sbjct: 230 LDKALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGQPC-PRCGRPIVRVSFMNRSSHF 288 Query: 284 CTYCQK 289 C +CQ+ Sbjct: 289 CPHCQR 294 >gi|297202625|ref|ZP_06920022.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713200|gb|EDY57234.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 286 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L + + TV + LH + +R DF H G ++ Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGAEDFAHRLE----GHRVGTP 56 Query: 54 SRRAKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTK 110 SRR KYL + LE + S++ HLGMSG +++ P P H+ I + + +T+ Sbjct: 57 SRRGKYLWLPLEDTDQSVLAHLGMSGQLLVQ------PHAAPDEKHLRIRVRFADEVDTE 110 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + L + + + + +P D F+ +K S +K A Sbjct: 111 ---LRFVDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFHQALRRKRSTIKRA 167 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++G+GNIY EALWR+++ R T G + +L+ ++ V+ A+ Sbjct: 168 LLDQSLISGVGNIYADEALWRSRIHYERPT------AGFTRPRTAELLGHVRDVMNAALA 221 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 222 VGGTSFDSLYVNVNGESGYFDRSLDAYGREGLPC-KRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|332701734|ref|ZP_08421822.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] gi|332551883|gb|EGJ48927.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] Length = 299 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/320 (32%), Positives = 153/320 (47%), Gaps = 52/320 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--------------RKNLRFDFPHHFSAATR 46 MPELPEVE I R L ++ + ++ + RK + F+ R Sbjct: 1 MPELPEVETIARGLAPDVQGRLIAEVEVRYSGAVCQSAGPGTTRKTTAPEKGRAFADLVR 60 Query: 47 GKKIIDVSRRAKYLLIEL--------------EGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 G+++ V RRAK L+ +L +L ++ HL M+GS + S A+P Sbjct: 61 GRRVDKVWRRAKLLVFDLGPKNAAESGADKVSPADLHLVFHLKMTGSVWLP-PSGAQP-- 117 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADN 149 H H+ +L N T +V + D R+FG+ + P LGPEP + Sbjct: 118 -DAHTHIVFTLDNGT-----KVHFRDIRKFGWCLALTGEELRSMPFFAALGPEPLEIGEK 171 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 F A+ F + + +K LL+Q+I+AGIGNIY E+L+R+ + P K + Sbjct: 172 DFVAL-----FKGRKAGMKALLLDQEIIAGIGNIYADESLFRSGIHPRTKAADV------ 220 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 P+ L L +E+Q VL AI GS+ DY G G FQN F VYG+ GE C+ CG Sbjct: 221 PEAKLRTLHRELQAVLRQAIAENGSTFSDYRTAQGDAGAFQNRFLVYGRAGEKCV-KCGG 279 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 ++ V AGR++ +C CQK Sbjct: 280 TLQSEVVAGRTSVFCPKCQK 299 >gi|228475233|ref|ZP_04059959.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] gi|228270844|gb|EEK12246.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] Length = 290 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 37/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-----------FSAATRGKK 49 MPELPEVE ++R + + N T+ I +K + + F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F I+ H S +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS----FNAIYLTHQFH 161 +++++D RRFG ++ + YP + PEP D FN YL+ Q Sbjct: 121 GK-----KLVFSDIRRFG--EIRNLNSFEDYPSFLEIAPEPFDEEALQHFNH-YLS-QKK 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 N +K LL+ KI+AG GNIY CEAL+RA + P RK + + + +L+ +QE Sbjct: 172 VANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKD---TSHQERQMLFYYVQE- 227 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ Sbjct: 228 --VLKEGIDNGGTSISDYRHADGKTGKMQLHLNVY---KQKTCKVCGHDIEQKVIASRNS 282 Query: 282 FYCTYCQK 289 +C YCQK Sbjct: 283 HFCPYCQK 290 >gi|221142561|ref|ZP_03567054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751515|gb|ADL65692.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 290 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GHTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFSNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|322517150|ref|ZP_08070034.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] gi|322124300|gb|EFX95811.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] Length = 273 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKIPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLL----FTDQVPTNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPAREL------SKAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|475032|dbj|BAA05066.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans] Length = 273 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNL-NRQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC + C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPC-ARCATPIEKIKVGGRGTHFCPSCQK 272 >gi|332670941|ref|YP_004453949.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] gi|332339979|gb|AEE46562.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] Length = 302 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 32/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ +HR + P F+ G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVI 115 K+L + L+ + +++ HLGMSG ++ A+ +++ +H H+ + L + + + Sbjct: 61 KFLWLLLDDEDAALMAHLGMSGQLLVR---SAQDLRDEVRHPHLRVRLALDDGSA---LD 114 Query: 116 YNDPRRFGFM---DLVET---------SLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHK 162 + D R FG + DLV T S + P P+ + + D S + L Sbjct: 115 FVDQRTFGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEAVRA 174 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + +K ALL+Q +V+GIGNIY E LWRA+L R T +L + + + + Q Sbjct: 175 RRTGIKRALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAE------VERALDGAQ 228 Query: 223 KVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 +V+ A+ GG+S YV+++G+ GYF + +VYG+ G PC CG +RR RS+ Sbjct: 229 EVMTAALAQGGTSFDALYVNVNGASGYFDRSLAVYGQAGRPC-PRCGAAVRRDEFMNRSS 287 Query: 282 FYCTYCQ 288 + C CQ Sbjct: 288 YTCPVCQ 294 >gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] Length = 328 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/287 (34%), Positives = 143/287 (49%), Gaps = 32/287 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H R R D P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 127 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 128 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRR 284 >gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus B4] gi|254789448|sp|C1B2Q5|FPG_RHOOB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226244474|dbj|BAH54822.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus opacus B4] Length = 289 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 152/298 (51%), Gaps = 26/298 (8%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRR 56 MPELPEVE++RR L +V ++ DI LH + +R P A + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDI-LHPRAIRRHLPGAADLAGQLTGERIAGADRR 59 Query: 57 AKYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + LE ++++VHLGMSG +++ P + P H+ I ++ + Sbjct: 60 GKYLWLVLEPSTVALVVHLGMSGQMLVQ------PPELPTEKHLRIRARLDSGLD---LR 110 Query: 116 YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG LVE + + +P D+ F+ K+S +K LL Sbjct: 111 FVDQRTFGGWALAPLVEVDGSLVPDSVAHIARDPLDSRFDLAATVKVVRGKHSEIKRVLL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +V+GIGNIY EALWRA++ R T L P+ + ++ Q+V+ +A+ G Sbjct: 171 DQTVVSGIGNIYADEALWRAQIHGNRLTDRLT----GPR--IGAVLTAAQQVMREALSQG 224 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ+ Sbjct: 225 GTSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQR 281 >gi|86742281|ref|YP_482681.1| formamidopyrimidine-DNA glycosylase [Frankia sp. CcI3] gi|86569143|gb|ABD12952.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. CcI3] Length = 323 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 153/333 (45%), Gaps = 63/333 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----RKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L + + + +H R++L FSA G++I R Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIASVDVHHPRAVRRHL--AGAADFSALLVGRRITAARR 58 Query: 56 RAKYLLIELEGNL---------------------------------------SIIVHLGM 76 R KYL + L+ + ++I HLGM Sbjct: 59 RGKYLWLVLQPPVDHAACAPVVPEEPPEEESAAVLAEMSPPALPPGHPAQGDALIAHLGM 118 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SG ++ P P H+ I ++ R + D R FG + V T Sbjct: 119 SGQLLV------VPPATPDQKHLRIRFVFTDGGRELRFV--DQRTFGGL-AVATGEADLP 169 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P+ + +P D +F+ +T + ++ + +K ALL+Q +V+G+GNIY EALW AKL Sbjct: 170 APVAHIARDPLDPAFDERLVTERMRRRRTGVKRALLDQTLVSGVGNIYADEALWAAKLHY 229 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSV 255 R T +L + + +L+ ++ V+I A++ GG+S R YV DG G F+ + V Sbjct: 230 ARPTETLTRAE------VGRLLGCVRTVMIAALEVGGTSFDRLYVSADGVSGLFERSLQV 283 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ G PC + CG +RR RS+F C CQ Sbjct: 284 YGRAGRPC-TRCGDAVRRDAFMNRSSFTCPTCQ 315 >gi|86604927|ref|YP_473690.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] gi|86553469|gb|ABC98427.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] Length = 283 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 144/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + + + + L + + + F+ G + RR KY Sbjct: 1 MPELPEVETVRRDLQRLTLGLCILSVEVLLPRTVAYPGKDEFAQGLAGSCLTQWQRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ + VHL M+G + S PI H V + L + + + D Sbjct: 61 LLGSLDSGAVLGVHLRMTGQLLWVQGSAPLPI----HTRVRLHLEQG-----WELRFVDL 111 Query: 120 RRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG M LV ++ + P L++LGPEP +F+ Y K +K ALL+Q +V Sbjct: 112 RTFGQMWLVPAGVEPETVIPALQSLGPEPLSPAFSEAYFQAALQKSRRPIKAALLDQSLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+ LS I + Q + K +L + + +VL ++ G++LR Sbjct: 172 AGVGNIYADEALF---LSGIHPSTPAAQLSDAAKS---RLRESLIQVLRAGLEQRGTTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G G +Q VYG+ G+PC CG I+R +GRS +C CQ Sbjct: 226 DYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRSKLSGRSAHFCPRCQ 275 >gi|21283361|ref|NP_646449.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MW2] gi|49486515|ref|YP_043736.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650560|ref|YP_186573.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87161684|ref|YP_494330.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195496|ref|YP_500300.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221794|ref|YP_001332616.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509903|ref|YP_001575562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253732340|ref|ZP_04866505.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258451797|ref|ZP_05699819.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|262048660|ref|ZP_06021543.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|262052260|ref|ZP_06024465.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|282920229|ref|ZP_06327954.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|284024737|ref|ZP_06379135.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 132] gi|294848710|ref|ZP_06789456.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|297207598|ref|ZP_06924033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911680|ref|ZP_07129124.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304380720|ref|ZP_07363389.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204801|dbj|BAB95497.1| MW1632 [Staphylococcus aureus subsp. aureus MW2] gi|49244958|emb|CAG43419.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284746|gb|AAW36840.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87127658|gb|ABD22172.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203054|gb|ABD30864.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374594|dbj|BAF67854.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368712|gb|ABX29683.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723862|gb|EES92591.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257860509|gb|EEV83335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|259159861|gb|EEW44900.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|259163307|gb|EEW47866.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|269941169|emb|CBI49556.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus TW20] gi|282594577|gb|EFB99562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|294824736|gb|EFG41159.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|296887615|gb|EFH26513.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887101|gb|EFK82302.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304340719|gb|EFM06650.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198614|gb|EFU28942.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus CGS01] gi|320140433|gb|EFW32287.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143971|gb|EFW35740.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314361|gb|AEB88774.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus T0131] gi|329728368|gb|EGG64805.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21189] gi|329733282|gb|EGG69619.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFSNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|297590777|ref|ZP_06949415.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] gi|297575663|gb|EFH94379.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] Length = 290 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 152/309 (49%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFTNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTRQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|78185409|ref|YP_377844.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9902] gi|78169703|gb|ABB26800.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9902] Length = 278 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 145/294 (49%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I C R HF A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVDHFVAGLKGATVGAWSRRGK 60 Query: 59 YLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ +LE N S VHL M+G F H + A P +H + N N + + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQW-HATPAAPC-----SHTRVRFWNQHNEE---LRFV 111 Query: 118 DPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGDDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LIAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LIRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPISREKLSGRSTHWCPSCQR 278 >gi|227504756|ref|ZP_03934805.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] gi|227198606|gb|EEI78654.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] Length = 273 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 148/298 (49%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + T + LH R N + P G++I V+RR K Sbjct: 1 MPELPEVESVRRGLEGYLPGRTFERVEVLHPRANRGQEGP--LDQLLVGREIGGVARRGK 58 Query: 59 YLLIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ IE G + VHLGMSG + T N +H + SL+ N Sbjct: 59 FMWIEFADENLHDPGRDVLFVHLGMSGQMRVGET-------NSKHVRIRASLSGGVN--- 108 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG+ L+ LK + + P+P + F+ + + K + +K AL Sbjct: 109 --LSFIDQRTFGYW-LLAPWLKIAH-----IAPDPLEPDFDIVAAARRIRAKKTAVKTAL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+GIGNIY EALW A++ P +K +L Q + LI V+ A+ Sbjct: 161 LDQTVVSGIGNIYADEALWAAQVQPQKKASTLRQRD------AIALIDAAASVMRAALKV 214 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF+ + YG+TG PC CG + R+V GRST +C CQ Sbjct: 215 GGTSFDALYVNVNGESGYFERSLHAYGRTGAPC-DRCGTELVRVVVGGRSTHFCPRCQ 271 >gi|15924679|ref|NP_372213.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50] gi|15927267|ref|NP_374800.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus N315] gi|49483931|ref|YP_041155.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|148268169|ref|YP_001247112.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH9] gi|150394236|ref|YP_001316911.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156980006|ref|YP_001442265.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu3] gi|255006473|ref|ZP_05145074.2| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425804|ref|ZP_05602228.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428470|ref|ZP_05604868.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431104|ref|ZP_05607481.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433787|ref|ZP_05610145.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257436703|ref|ZP_05612747.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257794074|ref|ZP_05643053.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|258415778|ref|ZP_05682049.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|258421985|ref|ZP_05684905.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|258438257|ref|ZP_05689541.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|258443715|ref|ZP_05692054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|258445926|ref|ZP_05694102.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|258448393|ref|ZP_05696510.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|258454126|ref|ZP_05702097.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|269203307|ref|YP_003282576.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282893184|ref|ZP_06301418.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|282904260|ref|ZP_06312148.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282906085|ref|ZP_06313940.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909000|ref|ZP_06316818.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911316|ref|ZP_06319118.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914485|ref|ZP_06322271.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282916949|ref|ZP_06324707.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282919454|ref|ZP_06327189.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282924831|ref|ZP_06332497.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282927819|ref|ZP_06335430.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|283770753|ref|ZP_06343645.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283958440|ref|ZP_06375891.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503563|ref|ZP_06667410.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|293510578|ref|ZP_06669283.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|293537120|ref|ZP_06671800.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|295405999|ref|ZP_06815807.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295428260|ref|ZP_06820889.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274884|ref|ZP_06857391.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MR1] gi|297245075|ref|ZP_06928952.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|13701485|dbj|BAB42779.1| SA1512 [Staphylococcus aureus subsp. aureus N315] gi|14247461|dbj|BAB57851.1| similar to formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus Mu50] gi|49242060|emb|CAG40759.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|147741238|gb|ABQ49536.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus JH9] gi|149946688|gb|ABR52624.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156722141|dbj|BAF78558.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257271498|gb|EEV03644.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275311|gb|EEV06798.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278052|gb|EEV08700.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281880|gb|EEV12017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257284054|gb|EEV14177.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257788046|gb|EEV26386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|257839371|gb|EEV63844.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|257842029|gb|EEV66458.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|257848301|gb|EEV72292.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|257851121|gb|EEV75064.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|257855168|gb|EEV78107.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|257858361|gb|EEV81246.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|257863578|gb|EEV86335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|262075597|gb|ACY11570.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282313197|gb|EFB43593.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282317264|gb|EFB47638.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282319436|gb|EFB49788.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282321666|gb|EFB51991.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282325011|gb|EFB55321.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327264|gb|EFB57559.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331377|gb|EFB60891.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282590329|gb|EFB95408.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|282595878|gb|EFC00842.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282764502|gb|EFC04628.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|283460900|gb|EFC07990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283790589|gb|EFC29406.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817372|gb|ADC37859.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus 04-02981] gi|290919965|gb|EFD97033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|291095229|gb|EFE25494.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|291466469|gb|EFF08990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|294968996|gb|EFG45017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295127660|gb|EFG57297.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297178155|gb|EFH37403.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|298694959|gb|ADI98181.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus subsp. aureus ED133] gi|312437853|gb|ADQ76924.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH60] gi|315130677|gb|EFT86663.1| hypothetical protein CGSSa03_10550 [Staphylococcus aureus subsp. aureus CGS03] gi|315195593|gb|EFU25980.1| hypothetical protein CGSSa00_08000 [Staphylococcus aureus subsp. aureus CGS00] gi|323440767|gb|EGA98476.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O11] gi|323442922|gb|EGB00545.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O46] gi|329727534|gb|EGG63990.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21172] Length = 290 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFTNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|123965595|ref|YP_001010676.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9515] gi|166198729|sp|A2BUV8|FPG_PROM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123199961|gb|ABM71569.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9515] Length = 293 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 110/312 (35%), Positives = 153/312 (49%), Gaps = 42/312 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L +KN + + + R++ +P F + I RR Sbjct: 1 MPELPEVETVRKGLEQKLKNFIIKRVEICREST-VAYPIDKQDFVKGLQNSLINKWDRRG 59 Query: 58 KYLL----------------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHV 99 KYL+ + L+ N S++VHL M+G F KNP H Sbjct: 60 KYLIAKLKKADRNHTYIENEMSLKNNGSLVVHLRMTGYFTFN--------KNPTSPCKHT 111 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLT 157 I L +N N + + Y D R FG M V L K L LGPEP FN YLT Sbjct: 112 RIRLFDNNNNE---LRYIDVRSFGQMWWVREGLSPKNIIKGLGALGPEPFSEKFNISYLT 168 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 K ++K+ LL+Q IVAGIGNIY E+L+ A +SP R+ R++ K L KL Sbjct: 169 KIILNKTRSIKSILLDQTIVAGIGNIYADESLYSAGISPFREARTI------EKHELIKL 222 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I +VL +I AGG++ D+ ++G G F +VY +TG+ C + C +I R + Sbjct: 223 RIAIIEVLKKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKCHA-CKNLIERQKIS 281 Query: 278 GRSTFYCTYCQK 289 GRST +C CQK Sbjct: 282 GRSTHWCRKCQK 293 >gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] Length = 276 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 153/292 (52%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR----GKKIIDVSRR 56 MPELPEVE + + L ++ N T+TD+ + +NL +P + + G KI +SRR Sbjct: 1 MPELPEVETVIKGLRPLIINKTITDLEVREENL-IGYPDLSTVELKQMLIGAKIDSISRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY+LI+L+ N +++HL M+G +++ + +H H+ SL + + + Sbjct: 60 GKYILIKLDINKILVIHLRMTGKLLVKEVEEFRD----KHTHIIFSLDDGQEIR-----F 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 N+ R+FG + L++ Q L TLGPEP + + + F + +K+ LLNQK Sbjct: 111 NNVRKFGRIYLIDPDRPEQAGGLATLGPEPLSDQLSLEDFKNLFTNRRGVIKSLLLNQKF 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+ + + P RK +L + K+ ++ +L I GG+S Sbjct: 171 IAGIGNIYADEILYLSGIKPDRKADTLSEEEKE------KIYFNMKDILEKGIIYGGTSF 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYV+ G G FQ V+ + GE C C I++ GR++++C+ CQ Sbjct: 225 SDYVNAFGEKGSFQAELKVHQREGEEC-HICSSKIKKKKIGGRASYFCSKCQ 275 >gi|82751277|ref|YP_417018.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus RF122] gi|82656808|emb|CAI81237.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus RF122] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGVFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFSNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|283470956|emb|CAQ50167.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFIEIAPEPFTNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 298 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 148/305 (48%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L V T H + +R F+ G+ + V RR Sbjct: 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60 Query: 58 KYLLIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL +EL G+ +++ HLGMSG ++ P H+ + +T + + Sbjct: 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQMLVADHG------KPDEKHLRVRVTFDDD 114 Query: 109 TKKYRVIYNDPRRFGFMD---LVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKN 164 + R + D R FG + L + P P+ + +P D +F ++ Sbjct: 115 GPELRFV--DQRTFGGLSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAVAGIRRRR 172 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + LK ALL+Q +V+GIGNIY EALWRA+L R T SL + G ++ +V Sbjct: 173 TGLKRALLDQTVVSGIGNIYADEALWRARLHWARPTESLTRAQG------RAVLTAAAEV 226 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G+ GYF + +VYG+T C CG IRR RS+F Sbjct: 227 MDEALAQGGTSFDALYVNVNGASGYFDRSLAVYGQTDRAC-PRCGTPIRREAFMNRSSFS 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPRCQ 290 >gi|186701833|ref|ZP_02971501.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701121|gb|EDU19403.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 275 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N + YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKF---YYQAKEEWFNLAHTHIIIEFNNGMQLR-----YNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P +++ N T K+ K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFP-----TILAKNLTLKN-YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPC-QICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|253734527|ref|ZP_04868692.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] gi|253727468|gb|EES96197.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] Length = 290 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVKFSDKVIEGKAQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFSNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|283769053|ref|ZP_06341959.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] gi|283104410|gb|EFC05787.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] Length = 269 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 149/289 (51%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + ++ + D P F+ G++ SRR KYL Sbjct: 2 MPELPEVETVVRTLEQQISQCQIRSVRVYYDKIVGD-PKRFTDCLSGQRFRYFSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+ N +++VHL M G F I+ +P+ +H HV L N + Y D R Sbjct: 61 LFQLDRN-TLVVHLRMEGKFYIQDPR--EPLN--RHIHVVFDLDNGMELR-----YMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ L + LGPEP D F++ Y+ +K + LK+ LL+Q VAGI Sbjct: 111 KFGRMEVLPKELDLK--NFHGLGPEPFDPIFDSEYVYAFLKRKKAPLKSVLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L + + P R L K L++ +Q++L ++I+ GG+++R Y Sbjct: 169 GNIYADEILAKIGIRPKMSARRL------SKKKCEALVEAVQEILANSIELGGTTIRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + P C + I+ + AGRS++YC +CQK Sbjct: 223 SSLGVAGRFQTKCMVHLQKICP---KCQREIKMVRVAGRSSYYCPHCQK 268 >gi|325000485|ref|ZP_08121597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudonocardia sp. P1] Length = 280 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + V + LH + +R F+A G+ + +RR Sbjct: 1 MPELPEVEVVRRGLADHVLDRRVAAVEVLHPRAVRRHPTGSADFTARLTGRTLRAAARRG 60 Query: 58 KYLLIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL +EL+ G+ +++ HLGMSG ++E + P H+ + L + + + R Sbjct: 61 KYLWLELDTAEAGDDALLAHLGMSGQMLVEDPA------EPDEKHLRVRLRFDDDGPELR 114 Query: 114 VIYNDPRRFGFMD---LVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D R FG + L S P P+ + +P D +F+A ++ + +K Sbjct: 115 FV--DQRTFGGLSVHPLAPASGGGLLPEPVAHIARDPMDPAFSADDTVAALRRRRTEVKR 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +V+GIGNIY EALWRA+L +R T L + G + ++ V+ A+ Sbjct: 173 ALLDQTVVSGIGNIYADEALWRARLHGLRPTEKLTRAQG------HAVLDAATTVMTAAL 226 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 GG+S YV+++G+ GYF + +VYG+ C CG IRR RS+F Sbjct: 227 AQGGTSFDALYVNVNGASGYFDRSLNVYGQVDRAC-PRCGTPIRRDAFMNRSSF 279 >gi|302024112|ref|ZP_07249323.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05HAS68] gi|330832409|ref|YP_004401234.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] gi|329306632|gb|AEB81048.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] Length = 275 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ +I HL M G + + +H H + ++ + ++Y D R Sbjct: 61 LIYLTDHV-LISHLRMEGKY----NFFPDQVPANKHFHAFFTFSDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|300933884|ref|ZP_07149140.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 297 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 32/309 (10%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + H + +R P FS+ +I V RR KY Sbjct: 1 MPELPEVEVVRRGLESHILGRRFASVEVFHPRAVRGFDPVSFSSLLDATRIRSVDRRGKY 60 Query: 60 LLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT------ISLTNNTN 108 L + +EG+ ++ VHLGMSG ++ + +P+ + T +S + Sbjct: 61 LWMVVEGDSGASEQALFVHLGMSGQMLVNRET--QPVGKHERIRATFTDGSVLSFVDQRT 118 Query: 109 TKKYRVIYNDPRRFGFMDLV-------ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 ++ ++ P G +D + E PL T E + N I + Sbjct: 119 FGRWAMMSLVPDPHGTVDAIGGPRLIPEAVAHVAMDPLETAFTEDDRHLDNTIT---RIK 175 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 KNS +K LL+Q ++AGIGNIY EAL+ A + P R+ +G + + ++I Sbjct: 176 AKNSEIKRVLLDQTVIAGIGNIYADEALFAAGIRPRRRA------SGLSRPAIRRIIGHA 229 Query: 222 QKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + V++ A+D GG+S YV+++GS GYF + VYG+ G+PC CG I+R+ GRS Sbjct: 230 RAVMLRALDEGGTSFDSLYVNVNGSSGYFSRSLQVYGREGKPC-KVCGTPIKRVQFGGRS 288 Query: 281 TFYCTYCQK 289 + YC CQ+ Sbjct: 289 SHYCPVCQR 297 >gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylase [Rhodococcus jostii RHA1] gi|123045457|sp|Q0S2E0|FPG_RHOSR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110823012|gb|ABG98296.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 292 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 152/297 (51%), Gaps = 26/297 (8%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRR 56 MPELPEVE++RR L +V ++ DI LH + +R P A + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDI-LHPRAIRRHLPGAADLAGQLTGERIASADRR 59 Query: 57 AKYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KYL + LE ++++VHLGMSG +++ P + P H+ I ++ + Sbjct: 60 GKYLWLVLEPSTVALVVHLGMSGQMLVQ------PPELPTEKHLRIRARLDSGLD---LR 110 Query: 116 YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG LV+ + + +P D F+ K++ +K ALL Sbjct: 111 FVDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKHTEVKRALL 170 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +V+GIGNIY EALWRA++ R T L PK + +++ Q+V+ +A+ G Sbjct: 171 DQTVVSGIGNIYADEALWRARIHGNRLTDRL----SGPK--VREVLTAAQEVMREALTQG 224 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ Sbjct: 225 GTSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQ 280 >gi|317151855|ref|YP_004119903.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] gi|316942106|gb|ADU61157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] Length = 272 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L V+ + + + +A G ++ VSRRAK L Sbjct: 1 MPELPEVEVIARGLHAVLVGRVIAAVEPVDPTRLSEDGAALAAKVVGAGVVRVSRRAKVL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ HL M+G + H +P++ +H+ L + + + + D R Sbjct: 61 LIGLGNGATLAFHLKMTGRVV--HGPM-RPVE--RHDRTRFILDDGS-----LLCFADMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + L +GPEP D A L + ++ +K LL+Q +VAG+ Sbjct: 111 RFGYVRAFAPGGLETWDFLCRVGPEPLDTPPAA--LAGRVLSRSGRIKALLLDQAVVAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA + P +TR N + +L +Q VL AI GSS+RDYV Sbjct: 169 GNIYADESLHRAGIHP--QTR----GNRLGRAGAERLFAHLQDVLRQAIAENGSSIRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN+F+VYG+ G PC + CG ++ + AGR++ +C CQ Sbjct: 223 NASGDAGAFQNSFAVYGRKGSPC-AVCGAILFAVKVAGRTSTFCPRCQ 269 >gi|323342140|ref|ZP_08082373.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464565|gb|EFY09758.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 273 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L +K + I L D + G RR KYL Sbjct: 1 MPELPEVETIIRTLEKSLKGKQIDSINFIYPKLLEDQSEYSLENLVGSNFKAFHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E+ L I+HL M G F + A +H H I+ T + Y D R Sbjct: 61 WFEMSNGLHWILHLRMEGKFHLYDYDKAPS----KHTHCVINYDGGT------IHYLDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +F M +V+ LKY + LG EP D++ N Y+ + H +K+ LL+Q I+AGI Sbjct: 111 KFSRMAVVKDPLKYL--ETKNLGYEPFDSNLNGEYVYQKIHHSKRVMKSILLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++ P+ + L++ + +L +AI AGG+++R Y Sbjct: 169 GNIYADEILFETQIHPLTTGSKITMKQCDS------LVETTKIILRNAIKAGGTTVRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQ + YG+ G+PC S C +++RIV +GRST +C CQK Sbjct: 223 SSLNVSGRFQINLNAYGRAGDPC-SRCNSIMKRIVVSGRSTVFCEKCQK 270 >gi|168483039|ref|ZP_02707991.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|172043411|gb|EDT51457.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|332201436|gb|EGJ15506.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47368] Length = 274 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L ++ ++ I + + K ++ D F + I + RR KY Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDL-EEFQRELPSQIIESMGRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L + +I HL M G + P + P+ H ++Y D Sbjct: 60 LLFCLTDKV-LISHLRMEGKYFY------YPDQVPERKHAHFFFRFEDGGT---LVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG Sbjct: 110 RKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQIFQAALAKSKKPIKSHLLDQTLVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 170 LGNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 224 TNAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|91070098|gb|ABE11022.1| formamidopyrimidine-DNA glycolase [uncultured Prochlorococcus marinus clone ASNC729] Length = 292 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/311 (34%), Positives = 150/311 (48%), Gaps = 41/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP F I RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDST-IAFPINKEEFIKGLLNSLIYKWDRRG 59 Query: 58 KYLLIELE---------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVT 100 KYL+ +L+ N +++HL M+G F K I+N H H Sbjct: 60 KYLIAQLKEVQNENGQFLLENSKNNGFLVIHLRMTGYF--------KFIENSSHPCKHTR 111 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 I + N + + Y D R FG M + + SL L +LGPEP F+A YL Sbjct: 112 IRFFDKNNNE---LRYIDVRSFGQMWWINKDLSLNKIVKGLGSLGPEPFSKDFDANYLKK 168 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ D L KL Sbjct: 169 VISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTI------KNDELIKLK 222 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R G Sbjct: 223 ESIVTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RRCGNLIERQKITG 281 Query: 279 RSTFYCTYCQK 289 RST +C CQK Sbjct: 282 RSTHWCPKCQK 292 >gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302433947|gb|EFL05763.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TV + LH + +R F+ G I RR Sbjct: 1 MPELPEVETVRAGLEAHVAGRTVRAVEVLHDRAIRRHAQGAADFTGRLAGVAIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ P P H+ + + + R + Sbjct: 61 KYLWLELSDGEAVLAHLGMSGQMLVQ------PEGAPDEKHLRVRVRFADGGPELRFV-- 112 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + +LV + + +P D F+ + + +K ALL+Q Sbjct: 113 DQRTFGGLALDELVVVDGDSLPGTIAHIARDPMDPKFDPEAAVRALRSRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR+KL R T L G L+ V+ A+ AGG+ Sbjct: 173 TLVSGVGNIYADEALWRSKLHWSRPTEKLTAAQGR------TLLSAASDVMSAALLAGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF+ + YG+ G PC CG IRR RS+F C CQ+ Sbjct: 227 SFDALYVNVNGESGYFERSLDAYGQEGLPC-RRCGSPIRREPFMNRSSFSCPRCQR 281 >gi|328954231|ref|YP_004371565.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] gi|328454555|gb|AEB10384.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+IRR L + + + L R+ LR A+ G ++RR KYL Sbjct: 1 MPELPEVEVIRRGLAKKLVGDKIIAVDLGRQRLRRQALDSELASLVGHTFSRLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ +++VHL M+G +++ SC P+ P H H+T+ ++++Y D R Sbjct: 61 LLHLDQGQTLLVHLAMTGRLLLQTNSC--PL--PPHVHLTLHCQTG-----HKLLYQDMR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + P L +G EP +L + + +KN LL+ + +AGI Sbjct: 112 RFGQILLYPPGKR--PPALEQVGWEPFSRGLTPEWLRQKTVRLTRPVKNFLLDGRFIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKT-RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E L+ A++ P R ++ T + ++++ K AGG+++ +Y Sbjct: 170 GNIYASETLFEARVHPQTPVGRIDLKTWETLLRAIRRILRRAIK-------AGGTTIVNY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V DG G F VYG+ G PC C I R+V AGRSTF+C CQ Sbjct: 223 VDCDGQSGLFGVQLKVYGRAGSPC-PVCQTPITRLVMAGRSTFFCPTCQ 270 >gi|283851990|ref|ZP_06369266.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] gi|283572714|gb|EFC20698.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] Length = 289 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 105/307 (34%), Positives = 148/307 (48%), Gaps = 36/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + V I RK L ++ A G+ + VSRRAK Sbjct: 1 MPELPEVETIARALAPGLVGRVVVGIEAPDRKVLAAPKTRAAWARAAAGRTVTAVSRRAK 60 Query: 59 YLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 LL+ L E L HL M+G F I T P + + + Sbjct: 61 LLLVHLGPAPAPGSLPGAPDLDEDTLLFAFHLKMTGRFHIAPTDA----PPPAYARLLVR 116 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + + ++++D RRFG L+ +P TLGPEP D + A + Sbjct: 117 LDDGQS-----LVFSDMRRFGTARLLTPQALSDWPFYATLGPEPWDMTPEA--FEAALSR 169 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + +K LL+Q ++AGIGNIY E+L+ A + P +SL KL+ +Q Sbjct: 170 RTTRIKAVLLDQTVMAGIGNIYADESLFAAGIRPDTPAKSLSAGQ------RQKLLAAVQ 223 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ AI AGGS++RDY DG G FQ+ F+VYGK GEPC C ++ AGR++ Sbjct: 224 AVIGRAIAAGGSTIRDYRTPDGVEGGFQHQFTVYGKAGEPC-PGCRAVLVAAKVAGRTST 282 Query: 283 YCTYCQK 289 +C +CQK Sbjct: 283 FCPHCQK 289 >gi|117928780|ref|YP_873331.1| formamidopyrimidine-DNA glycosylase [Acidothermus cellulolyticus 11B] gi|166215603|sp|A0LV85|FPG_ACIC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117649243|gb|ABK53345.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus cellulolyticus 11B] Length = 284 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRR L +V + + ++ H + +R F+ G++I V RR Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEV-FHPRAVRRHSGGAADFTGRLIGRRIQAVLRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL L+ +L+++ HLGMSG F++ A P +P+H + T+ ++ Sbjct: 60 GKYLWFALDSDLALLAHLGMSGQFLL--ADAASP--SPKHLRARFAFTDGDPELRF---- 111 Query: 117 NDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + L L P + + P+ D +F+ +F ++ + +K ALL+Q Sbjct: 112 VDQRTFGGLTLAP--LIADVPASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQT 169 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +++G+GNIY EALWRA+L T + +L+ ++ V A+ AGG+S Sbjct: 170 LISGVGNIYADEALWRARLHYATPTVDISAAT------CRRLLAALRAVFRAALRAGGTS 223 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G G+F + +VYG+ G+PC CG I R RS+F C CQ Sbjct: 224 FDALYVNVNGQSGFFDRSLAVYGRAGQPC-RRCGTAIVREPFMNRSSFRCPACQ 276 >gi|229823044|ref|ZP_04449113.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] gi|229787483|gb|EEP23597.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] Length = 292 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 MPELPEVE +RR L +++ + ++ + L P + RG+ I V RR Sbjct: 1 MPELPEVETVRRGLTSLIEGKIIAEVQVFWPKLIDLRPQETLAQWQDYLRGQTIQAVGRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL ++ G ++ HL M G + + +P P+H H+ ++ + ++ Y Sbjct: 61 GKYLWLDF-GPQVLVFHLRMEGKCHV-YPPGQEPKTKPKHVHLIMTFKDGSH-----FYY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG + Y + LGPEP +F+ + Q LK LL+Q + Sbjct: 114 EDVRKFGRFSYMAKDQLESYFASKKLGPEPTQEAFDLAHFRAQLASSKRALKPLLLDQTL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E ++A++ P R L + + +L I ++L A+ AGGS++ Sbjct: 174 VAGLGNIYVDEVCFKAQIHPARPACDLTVHE------VKRLHAAIIEILAAAVQAGGSTI 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R Y + G+ G +Q + +VYG+ EPC CG++I ++ GR T +C +CQ Sbjct: 228 RTYRNSLGAAGTYQESLAVYGRVDEPC-ERCGRLIHKVQLGGRGTHFCPHCQ 278 >gi|254430782|ref|ZP_05044485.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] gi|197625235|gb|EDY37794.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] Length = 282 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 150/306 (49%), Gaps = 43/306 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + +HR D P F+AA +G + RR K Sbjct: 1 MPELPEVETVRRGLEQRTQGFAIARVQVHRPRAVASPDDPEAFAAALQGCTVQHWRRRGK 60 Query: 59 YLLIELE-------GNLSIIVHLGMSGSFI---IEHTSCAKPIKNPQHNHVTISLTNNTN 108 YL+ +L+ G+ VHL M+G F+ SCA H + L N+ Sbjct: 61 YLISQLQRGDGRDGGHWG--VHLRMTGQFLWLEAPRPSCA---------HTRVQLWNDQG 109 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHK 162 + + + D R FG M + PP LR LGPEP +F A YL + + Sbjct: 110 QE---LRFVDTRSFGQMWWIPPG----EPPEMVMGGLRHLGPEPLGPAFTASYLEGRLNG 162 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + +KNALL+Q +VAG+GNIY E+L+ A + P L + L +L++ + Sbjct: 163 SSRPIKNALLDQAVVAGVGNIYADESLFAAGIRPHTPAGQLRPHQ------LDRLVKALV 216 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ D+ + G+ G + VY + GEPC CG I+R AGRS+ Sbjct: 217 EVLEISIGAGGTTFSDFRDLTGTNGNYGGVALVYRRGGEPC-RRCGTPIQRHKLAGRSSH 275 Query: 283 YCTYCQ 288 +C CQ Sbjct: 276 WCPNCQ 281 >gi|320160672|ref|YP_004173896.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] gi|319994525|dbj|BAJ63296.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] Length = 271 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 156/297 (52%), Gaps = 34/297 (11%) Query: 1 MPELPEVEII--------RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID 52 MPELPEV+ I R ++ K +T ++ K L F G++I D Sbjct: 1 MPELPEVQTIVSVLRDGGRGAPSILGKQITAANVAWQ-KTLAMPDLFTFQQNITGEEIRD 59 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + RR K++ I L+ + + +HL MSG +E ++ P++ H+ + + ++ Sbjct: 60 IRRRGKFIWIILQ-SAHLFIHLRMSGDVRVEPSTS--PLQ--LHDRLWLEFSDG-----L 109 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPR+FG + L E + LGPEP D S + + K LK LL Sbjct: 110 RLVFNDPRKFGRVWLAENPQDV----IGDLGPEPLDESLSPTQFHQRLTKNRRQLKALLL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GNIY EAL+ AKL P R + SL +P++ +L+Q I++VL + I Sbjct: 166 DQNFLAGVGNIYSDEALFLAKLHPKRSSDSL-----SPEES-ARLLQAIRQVLEEGIRKN 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S+ D+V+ G FQN+F VY +TGEPC CG I RI + R T +C CQ+ Sbjct: 220 GASI-DWVYRGGE---FQNSFRVYQRTGEPC-PICGTPIERITVSQRGTHFCPSCQR 271 >gi|148241549|ref|YP_001226706.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] gi|147849859|emb|CAK27353.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] Length = 282 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 152/299 (50%), Gaps = 27/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRK--NLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR L + + + T +C R + D P F+AA RG ++ RR Sbjct: 1 MPELPEVETVRRGLELQVGRFPIGETIVCRSRAVAAPKGD-PDGFTAALRGCELAGWRRR 59 Query: 57 AKYLLIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL+ +LE + + + VHL M+G F + P H + ++K+ Sbjct: 60 GKYLVAKLERDGAPAGELGVHLRMTGQFQWLQRE-----ERPPCPHTRVRFL----SEKH 110 Query: 113 RVIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + V T + L LGPEP ++FNA YL + + +KNA Sbjct: 111 ELRFVDVRSFGELWFVPLGTPTEQVITGLTRLGPEPFSDAFNANYLRQRLKGSSRPIKNA 170 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIY E+L+ A + P + S+ L KL + KVL +I Sbjct: 171 LLDQALVAGVGNIYADESLFMAGIRPHTPSGSVSAAR------LEKLRAALVKVLELSIG 224 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGG++ D+ + G+ G + VY + GEPC CG ++RR GRS+ +C CQ+ Sbjct: 225 AGGTTFSDFRDLTGTNGNYGGQARVYRRGGEPC-RQCGTILRRDTLGGRSSHWCPSCQR 282 >gi|93005206|ref|YP_579643.1| formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] gi|92392884|gb|ABE74159.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] Length = 307 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 156/321 (48%), Gaps = 50/321 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + S + V RRAKYL Sbjct: 1 MPELPEVETTKTSLTPLL-GQKVTNVQVFQPKLRWSMPDNLSDLI-DYTLDSVERRAKYL 58 Query: 61 LIEL-----EG--------NLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 ++ +G NL +++HLGMSGS H + K +H+H+ +S Sbjct: 59 ILNFIPLADDGISSSVEPRNLQPKQLLIHLGMSGSLQQHHHTSDKR----KHDHLIMSFI 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 +T+ ++ Y DPRRFG + +E Y L LGPEP + F A YL + + Sbjct: 115 GADDTQT-QLHYYDPRRFGSILWLE---DYGDKLLNHLGPEPLSDDFTADYLYYLIQRSE 170 Query: 165 SNL-----------------KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 ++ K+ ++ Q+ V G+GNIY E+L+ + + P N Sbjct: 171 QSIQTQSSKVIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPA------N 224 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 D + L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ GE C +C Sbjct: 225 KISYDQIVILVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGETC-PHC 283 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 ++ I GR++ YC CQ Sbjct: 284 DSVLENIKLNGRASVYCPVCQ 304 >gi|289550553|ref|YP_003471457.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] gi|289180085|gb|ADC87330.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] Length = 290 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 150/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLD---GFRQFTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS 102 G KI V RR+KY+ I +E N +I HLGM+G F I+ H +H HV Sbjct: 58 GYKIYKVERRSKYINIYIEKNQECRVLISHLGMAGGFFIVNHLDEIHAPNYRKHWHVIFH 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QF 160 L+N ++Y+D RRFG + V+ Y + + PEP D S YLT+ Q Sbjct: 118 LSNGK-----LLVYSDIRRFGEIRNVQAL--NNYASFKNMAPEPFDESALDHYLTYLNQP 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K+ +K +L+ K++AG GNIY CEAL+RA + P + +SL Q L E Sbjct: 171 KVKHKPIKQLILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQ------NLFLE 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +Q VL + I+ GG+S+ DY H DG G Q +VY + + C CG I + V A R+ Sbjct: 225 VQAVLNEGIEYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRN 281 Query: 281 TFYCTYCQK 289 + +C CQK Sbjct: 282 SHFCPVCQK 290 >gi|329936741|ref|ZP_08286448.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329303971|gb|EGG47854.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 293 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 151/293 (51%), Gaps = 19/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + LH + +R +F+ G ++ +RR Sbjct: 1 MPELPEVEVVRRGLTRWVAHRTVAAVEVLHPRAVRRHLAGGENFAQRLTGHRLGAPARRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + +++ HLGMSG +++ P + P H+ I + + + + Sbjct: 61 KYLWLPLEDTDEAVLAHLGMSGQLLVQ------PHEAPTEKHLRIRV-RFEDALGTELRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDEEAFHRALRRKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ PC CG +RR RS+++C CQ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDLPC-RRCGTPMRRRPWMNRSSYFCPKCQ 279 >gi|302333354|gb|ADL23547.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus JKD6159] Length = 290 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 150/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDT---FKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G I +V RR+KY++ +L+ +I HLGM+G F I I N +H HV Sbjct: 58 GYTITNVKRRSKYIVFQLDNKREKRILISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQF 160 L+N+ ++IY+D RRFG + V + YP + PEP N YL HQ Sbjct: 118 LSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFSNEALTYYLNRIHQQ 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 KN +K +L+ K++AG GNIY CEAL+RA + P +K + L +++++ ++E Sbjct: 171 SNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKIKDLTYQQ---QEMVFYYVRE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R+ Sbjct: 228 ---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIETKIIATRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPVCQK 290 >gi|313902129|ref|ZP_07835539.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] gi|313467592|gb|EFR63096.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] Length = 355 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/355 (29%), Positives = 148/355 (41%), Gaps = 82/355 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL------RFDFPHHFSAATRGKKIIDVS 54 MPELPEVE IRR+L + +T + + R + P F A G ++ + Sbjct: 1 MPELPEVETIRRDLERHLAGARITRVHVLRPEVVCGAGGEAIGPEAFRAVLEGTRLGRFA 60 Query: 55 RRAKYLLIELE----------------------------------GNLSIIVHLGMSGSF 80 RR KYLLIEL G L + +HL M+G Sbjct: 61 RRGKYLLIELHRAAGDPAAGSGLNTAPVLPDEPAGRRVRPAGPGGGRLWLAIHLRMTGRL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE----------- 129 + +P H HV L + ++D RRFG + L+ Sbjct: 121 TLARRGEPRP----PHTHVVFELEPGPGRSWEELRFSDVRRFGRLYLLPDNPLARARGRP 176 Query: 130 ----------------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 T L+ Y TLGPEP F A L + + + +K LL+ Sbjct: 177 AKRRAGGTVPEGPHGGTGLQGLY----TLGPEPLSRRFGAAELGRRLAGRRAPIKAVLLD 232 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++VAG+GNIY EAL+RA++ P R SL + +L + I+ VL +A+ AGG Sbjct: 233 QRVVAGLGNIYADEALFRARIHPARPAGSLTGQE------VARLARAIRSVLREAVAAGG 286 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ DY G G F +VY + G PC CG + + AGR++ YC CQ Sbjct: 287 TTFSDYRDGLGREGRFGRRLAVYDREGLPC-PRCGTPVAALRLAGRTSHYCPRCQ 340 >gi|332977506|gb|EGK14279.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. 1501(2011)] Length = 316 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/332 (31%), Positives = 159/332 (47%), Gaps = 65/332 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +L ++ N V + + + LR+ P + T G + D+ RRAKYL Sbjct: 1 MPELPEVETTRTSLKPLL-NKKVETVEVFQPKLRWPVPQDIDSLT-GYVLQDIERRAKYL 58 Query: 61 LIEL-----------EGNL----------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 +++ + N+ ++I+HLGMSGS K +H+HV Sbjct: 59 ILKFRRDNKDSLNNKQSNIINIASARDTKALIIHLGMSGSLQQFPVGTEKR----KHDHV 114 Query: 100 TISLTNNTNTKK-YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + + T+ ++ Y+DPRRFG + ++ Y+ L LG EP D +F+ YL Sbjct: 115 IMQYASADATQTPIQLHYHDPRRFGAILWLD---DYEQKLLGHLGIEPLDEAFSGDYLYD 171 Query: 159 QFHKKNSN-----------------LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 + H+ + N +K +++Q V G+GNIY E+L+ + + P Sbjct: 172 KIHRLSENKVRKPQSKTKLKPITRSIKAVIMDQVFVVGVGNIYATESLFLSGIHP----- 226 Query: 202 SLIQNNGTPKDILYK-----LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 TP D L K L + I+ +L AI GGS+LRD+ G+ GYFQ VY Sbjct: 227 ------STPADKLTKSQLSVLAEHIRAILKRAITQGGSTLRDFTVASGTTGYFQQTLLVY 280 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GK +PC CG I ++ GR++ +C CQ Sbjct: 281 GKHKQPC-PTCGTTIDKVTITGRASTFCPNCQ 311 >gi|329767933|ref|ZP_08259445.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] gi|328838596|gb|EGF88199.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] Length = 286 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 151/304 (49%), Gaps = 35/304 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-------HRKN----LRFDFPHHFSAATRGKK 49 MPELPEVE I+ L V+ N + D+ H+ N ++ D ++FS +GK Sbjct: 1 MPELPEVENIKFGLEEVVINKQILDMKYSNVVTESHKLNKMAIVKQDI-NYFSENVKGKT 59 Query: 50 IIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNT 107 I +SRR KYL L EG II H GM+G+F + KN +H HV L+ Sbjct: 60 IEKLSRRGKYLYFTLNEG--YIITHFGMTGAFFLVKDISEITNKNYFKHQHVIFELSTGE 117 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKKNS 165 ++IY+D RRFG + +E K++ P L PEP D +L + K+ Sbjct: 118 -----KLIYSDIRRFGELRYIEDVTKFK--PFVNLAPEPFDKKAKKYFLDKLDENKYKDQ 170 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++K LL + G GNIY CE L+R K+ P+ K L + K+ L+K E+ +L Sbjct: 171 SIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKK---KESLFK---ELVDIL 224 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 AI GGS++ DYVH DG G QN +YGK P G + + GRS+ +C Sbjct: 225 ELAIKEGGSTISDYVHTDGGEGNMQNFHQIYGKKVCP----LGHDVENVTIKGRSSHFCP 280 Query: 286 YCQK 289 CQK Sbjct: 281 ICQK 284 >gi|284047823|ref|YP_003398162.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] gi|283952044|gb|ADB46847.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] Length = 273 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 148/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R +L+ +V K + + L + L D P F+ +G + V RR K Sbjct: 1 MPELPEVEQVRISLLPHIVGKTIEKVRVDLPKMILHPD-PDAFARRLQGARFTGVRRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL +ELEG ++VHL M+G+ + + K + P + + L+ N + + D Sbjct: 60 YLGLELEGGDWLLVHLRMTGALL----ALPKDQQEPPYTRMAFFLSGREN-----LYFTD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG LV ++ +LGPEP + + A YL + K + +K +L+Q ++A Sbjct: 111 IRTFGVAALVGED-GWRDKGYESLGPEPLEPALTAEYLRARAKGKTTVVKGFILDQSVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P R+ L + L ++ V+ ++ G++ R+ Sbjct: 170 GLGNIYADEALFAAGIRPTRRVNRLTRKE------WEALTLGVRAVIHQGLEHHGTTFRN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG +G VY + G PC CG ++++I AGR + YC +CQK Sbjct: 224 YQDADGKMGDNSRYLQVYHRKGLPC-RRCGTLLKQIKVAGRGSVYCPHCQK 273 >gi|312863118|ref|ZP_07723356.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] gi|311100654|gb|EFQ58859.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] Length = 273 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKVPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLL----FTDQVPTNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P N K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHP------ETPANKLSKAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|6016043|sp|P95744|FPG_SYNEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1781316|emb|CAA71333.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus] Length = 284 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 142/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ L R P F R ++I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRRIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T P H + T + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTTP------QPPCPHTRVRWFFPTRAE---LRFVD 111 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L TP+ + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTL-----TPEQV-QRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|297156898|gb|ADI06610.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 312 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 157/296 (53%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ LH + +R F+A +G++ RR Sbjct: 1 MPELPEVEVVRRGLERWISGRTVAEVQVLHPRAVRRHLGGGEDFAARLKGRRAGVARRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + S++ HLGMSG +++ A + +H + + ++ T+ + + Sbjct: 61 KYLWLPLEDADESVLAHLGMSGQLLVQPHGAA----DEKHLRIRVRFNDSIGTE---LRF 113 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + L VE + + + +P D +F+ ++ + +K ALL+ Sbjct: 114 VDQRTFGGLSLHETVEGAADGLPAAIAHIARDPLDPAFDEAAFHTALRRRRTTVKRALLD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L R T +L + P+ + +L+ ++ V+ A+ GG Sbjct: 174 QSLISGVGNIYADEALWRARLHYDRPTATLTR----PRSV--ELLDHVRDVMNAALAVGG 227 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF+ + YG+ EPC C +RR RS+++C CQ Sbjct: 228 TSFDSLYVNVNGESGYFERSLDAYGRENEPC-RRCATPMRRRPWMNRSSYFCPRCQ 282 >gi|297170281|gb|ADI21318.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_09F21] Length = 269 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + +KN + I + +LR KKII+V R+ KY+ Sbjct: 1 MPELPEVETTKRGVEPFLKNKIIKRIEVRNSSLRVPVNKTKLKKIINKKIIEVGRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L II+HLGMSG+ + + + +H+HV + L + +I+ND R Sbjct: 61 FLQLNDESKIIIHLGMSGTLRVHNK-----FQKLKHDHVILELETGQS-----LIFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG LV + ++ GP+P + Y ++ S LK LLN KI++GI Sbjct: 111 RFGLFHLVLKN--EEFSMFENNGPDPLSQK-DGKYFYNKIKNSRSTLKALLLNNKIISGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++LSP ++ N K ++I+ + VL AI GG++L DY Sbjct: 168 GNIYASEILFLSRLSPKKR------GNKVTKIQCDEIIKFSKIVLNRAIKFGGTTLNDYH 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + GYF+ +VY + GE C C I +I Q RST++C CQ Sbjct: 222 NAENKPGYFKIKLNVYDREGEEC-KECKSKIFQIRQNNRSTYFCKNCQ 268 >gi|86608720|ref|YP_477482.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557262|gb|ABD02219.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 279 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R++L + + + ++ L R + + F + G + RR K Sbjct: 1 MPELPEVETVRQDLQRLTLGPRILAVEVLLAR-TIAYPAGEMFGRSLIGTRFTQWQRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ + VHL M+G + S P+ H V ++ + + + D Sbjct: 60 YLLGSLDSRAVLGVHLRMTGQLLWVQGST--PLSA--HTRVRLAFEEGWDLR-----FVD 110 Query: 119 PRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M LV ++ + P L+TLGPEP +F+ Y K +K ALL+Q + Sbjct: 111 QRTFGQMWLVPAGVELEAVIPTLQTLGPEPFSPAFSEAYFQAALQKSRRLIKAALLDQSL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+ + + P+ +Q + K +L + + +VL ++ G++L Sbjct: 171 VAGVGNIYADEALFLSGIHPLTPA---VQLSDVAKA---RLREALIEVLRAGLEQRGTTL 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RDY + G G +Q VYG+ G+PC CG I+R+ AGRS +C +CQ Sbjct: 225 RDYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRMKLAGRSAHFCPHCQ 275 >gi|223932651|ref|ZP_03624650.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] gi|223898621|gb|EEF64983.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] Length = 297 Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 145/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 23 LPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 82 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ +I HL M G + + +H H + ++ + ++Y D R Sbjct: 83 LIYLTDHV-LISHLRMEGKY----NFFPDQVPANKHFHAFFTFSDGST-----LVYQDVR 132 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 133 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGL 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y Sbjct: 193 GNIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYK 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 247 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|116072678|ref|ZP_01469944.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] gi|116064565|gb|EAU70325.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] Length = 278 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 144/294 (48%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I C R F A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVERFVAGLKGAMVGAWSRRGK 60 Query: 59 YLLIELEGNL-SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ +LE N S VHL M+G F H + A P +H + N N + + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQW-HATPAAPC-----SHTRVRFWNQNNEE---LRFV 111 Query: 118 DPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGNDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LVAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LVRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPIIREKLSGRSTHWCPSCQR 278 >gi|299139806|ref|ZP_07032978.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] gi|298598160|gb|EFI54326.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] Length = 295 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/321 (30%), Positives = 146/321 (45%), Gaps = 58/321 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAAT-RGKKIIDVSRRAKY 59 MPELPEVE + + ++ + + K F P T G KI V R K Sbjct: 1 MPELPEVETVANGVDARVRGQRIVSVWTSGKPQTFKSPETEIVETLTGTKIEKVRRVGKT 60 Query: 60 LLIEL----------------------------EGNLSIIVHLGMSGSFIIEHTSCAKPI 91 ++++L + +VHLGM+G ++ + Sbjct: 61 IVMDLVRGGAAGKQIPSGNDNKKSKDKDKDAGTKDTAQFLVHLGMTGRLLVSQAE----V 116 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---AD 148 P H H ++L + + + DPRRFG + +V T Y P G EP ++ Sbjct: 117 PLPPHTHAVLALADGREVR-----FVDPRRFGRLSVVTTEEGYTGP-----GVEPTTVSE 166 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 F + F + +K ALLNQ I+ G+GNIY E+L+RA + P ++ L + Sbjct: 167 EEFAGL-----FKGRKLAIKAALLNQSILHGVGNIYADESLFRAGIRPRKQAGKLTRAE- 220 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L +L + +Q+VL AI GGSS+ DYV DG G+FQ VY + GE C +CG Sbjct: 221 -----LGRLHEALQQVLAHAIKLGGSSVSDYVDADGVRGFFQLEHKVYSRAGEDC-KDCG 274 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 +++IV GR+T YC CQ+ Sbjct: 275 AGLKKIVVGGRTTVYCPTCQR 295 >gi|315658047|ref|ZP_07910920.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] gi|315496937|gb|EFU85259.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] Length = 290 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 149/309 (48%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLD---GFRQFTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS 102 G KI V RR+KY+ I +E N +I HLGM+G F I+ H +H HV Sbjct: 58 GYKIYKVERRSKYINIYIEKNQERRVLISHLGMAGGFFIVNHLDEIYAPNYRKHWHVIFH 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QF 160 L+N ++Y+D RRFG + V+ Y + + PEP D S YLT+ Q Sbjct: 118 LSNGK-----LLVYSDIRRFGEIRNVQAL--NNYASFKNMAPEPFDESALDHYLTYLNQT 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K+ +K +L+ K++AG GNIY CEAL+RA + P + +SL Q L E Sbjct: 171 KVKHKPIKQLILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQ------NLFLE 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +Q VL + I GG+S+ DY H DG G Q +VY + + C CG I + V A R+ Sbjct: 225 VQAVLNEGIKYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRN 281 Query: 281 TFYCTYCQK 289 + +C CQK Sbjct: 282 SHFCPVCQK 290 >gi|313836650|gb|EFS74364.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314928157|gb|EFS91988.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972156|gb|EFT16253.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907981|gb|EGG27741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. P08] Length = 282 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 145/295 (49%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLM-----MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V++ + V D R + + F A G + V R Sbjct: 1 MPELPEVETVRAGLEDHVIPAVVEGVDVIDARGLRPSGGPEDAALFQTALTGHQFTAVRR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L +++ HLGMSG F + + +H + I+L + + + Sbjct: 61 RGKYLWFVLNDGTAMLAHLGMSGQFRVVDRHATRH----RHTRIVIALNDGRDLR----- 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L L P+ + P+P + F+ + + + S LK +LL+Q Sbjct: 112 FLDQRTFGGLALAPL-LDGIPGPVVHIAPDPFEKCFDVDEVARRLRTRKSTLKKSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWRA+ P L Q PK + +L+Q ++V+ +AI AGG+S Sbjct: 171 LVSGIGNIYADETLWRARYHPETPCSYLSQ----PKAV--ELLQTAREVIAEAISAGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF YG+ +PC CG +I R RS+F C CQ+ Sbjct: 225 FDALYVNVNGESGYFSRVLDAYGRENQPC-HRCGALIVREHFMNRSSFRCPRCQR 278 >gi|94987079|ref|YP_595012.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] gi|94731328|emb|CAJ54691.1| Formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] Length = 279 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMK-----NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE I R L ++ N TV + + ++ D A GK R Sbjct: 1 MPELPEVETIVRTLEPIINGRMCLNYTVYNQDSVQGDISLDV---LIGAIFGKPF----R 53 Query: 56 RAKYLLIEL----EGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTK 110 R K LLI L ++ +HL M+G ++ C H V+ SL ++ NT Sbjct: 54 RGKLLLIPLVIKDSHVYTLCIHLKMTGRILVYPQDRCPT-----THTRVSFSL-DDGNT- 106 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R+FG++ ++ T+ + +P TLGPEP + + +F + N+K+ Sbjct: 107 ---IFFEDIRKFGYVRILSTTEEPVWPFWNTLGPEPLE--IDVSTFIERFRGRRGNIKSL 161 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LLNQ+++AG GNIY E+L+RA++SP+ L + + L +Q+VL++AI Sbjct: 162 LLNQRVIAGCGNIYADESLFRAQISPMATVSQLSMES------IATLYHALQEVLLEAIA 215 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GSS++DY DG++G FQN+ +VYG+ G+PC+ C + + GR T +C+ CQ Sbjct: 216 SCGSSIKDYRAADGNVGAFQNSLNVYGRFGKPCVV-CKKDLEGTRIGGRMTVWCSSCQ 272 >gi|78355589|ref|YP_387038.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217994|gb|ABB37343.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 295 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 146/309 (47%), Gaps = 34/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + +T++ + F A T G+ I V RR K L Sbjct: 1 MPELPEVETIARGLAPELTGRRITEVEVFNAGSVQGDREVFDACTPGRVIAGVGRRGKLL 60 Query: 61 LIELEGNLS--------------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 L+ LE + HL MSG I + + P H + Sbjct: 61 LVHLEKERRQGAACRAVLDHRPAGDTPDMLAFHLRMSGRLFIYGP---EQLPGP-HTRII 116 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 I+L + R+ ++D R+FG + + + TLGPEP D + QF Sbjct: 117 ITLDSGR-----RLFFDDARKFGSCRALSPFSRPLWRFWATLGPEPLD--VDRETFIEQF 169 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q ++AG+GNIY E+L+RA + P + ++ + L +L E Sbjct: 170 AERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDEAERR--LGRLYDE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +++VL +AI GSS+RDY G G FQN F VYG++G C+S C + AGR+ Sbjct: 228 LREVLREAISECGSSIRDYRDARGDAGAFQNCFRVYGRSGMQCVS-CRDALTTARVAGRT 286 Query: 281 TFYCTYCQK 289 T YC+ CQK Sbjct: 287 TVYCSNCQK 295 >gi|319892737|ref|YP_004149612.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|317162433|gb|ADV05976.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|323464231|gb|ADX76384.1| formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius ED99] Length = 290 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 39/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + + + V D+ K + D F T Sbjct: 1 MPELPEVEHVKRGITPHIMHQKVIDVTFSEPVKRGKLEGKETIIKGIDLD---AFVKYTV 57 Query: 47 GKKIIDVSRRAKYLLIELE-GNLS--IIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTIS 102 G +I DV RR+KY+L +E GN+ +I HLGM+G+F + + I N +H V Sbjct: 58 GFEIADVQRRSKYILFRIENGNVERILISHLGMAGAFFVVQSLDDIAIPNFRKHWQVVFH 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L N +++Y+D RRFG + VE SL+ YP + + PEP + A YL K Sbjct: 118 LENGI-----KLVYSDIRRFGEIRNVE-SLE-AYPSILEIAPEPFEQEALAYYLAKSDEK 170 Query: 163 K--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K N +K +L+ ++++G GNIY CEAL+ A++ P +K + L T KL Sbjct: 171 KYLNKAIKPFILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSIAEKT------KLFNS 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + KVL I GG+S+ DYVH DG G Q+ VY + + C + C I ++ +GR+ Sbjct: 225 VVKVLEMGILNGGTSVADYVHADGQRGTMQDHLKVYKQ--KRC-ATCETAIETVIISGRN 281 Query: 281 TFYCTYCQ 288 T +C CQ Sbjct: 282 THFCPNCQ 289 >gi|254423013|ref|ZP_05036731.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] gi|196190502|gb|EDX85466.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] Length = 285 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 149/301 (49%), Gaps = 28/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V N V ++ L R + F A +I RR K Sbjct: 1 MPELPEVETVRRGLNRVSLNQPVRGGEVRLARTIAYPELADAFLEAMSSVQITSWHRRGK 60 Query: 59 YLL--------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 YLL +ELE + VHL M+G + P P H + L + + + Sbjct: 61 YLLATLCQRRRLELEPAGWLGVHLRMTGQLLW------VPKNEPMQTHCRVRLFFDGDNE 114 Query: 111 KYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + Y D R FG + V + ++ L+ LGPEP F+ YL + +K Sbjct: 115 ---LRYVDQRTFGRLWWVPPDRAIDSVMTGLQKLGPEPFSEEFSIDYLASALKGRQRPIK 171 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 NALL+Q++VAGIGNIY EAL+ LS IR T ++ + T + I KL Q I+ VL + Sbjct: 172 NALLDQRLVAGIGNIYADEALF---LSGIRPT--VVCDRLTRRKIT-KLHQAIRDVLTTS 225 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I++GG++ D+ + G+ G + VY + GEPC CG I RI AGRS YC CQ Sbjct: 226 IESGGTTFSDFRDVHGTNGNYGGVAWVYDREGEPC-RKCGVGILRIKLAGRSAHYCPKCQ 284 Query: 289 K 289 + Sbjct: 285 R 285 >gi|294631624|ref|ZP_06710184.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292834957|gb|EFF93306.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 289 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + TV ++ LH + +R P F+ G ++ SRR KYL Sbjct: 1 MPEVEVVRRGLERWVAQRTVAEVAVLHPRAVRRHLAGPDDFARRLIGHRVGTPSRRGKYL 60 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + + +I+ HLGMSG +++ A +H + + + T+ + + D Sbjct: 61 WLPLADSDQAILAHLGMSGQLLVQPREAAAE----KHLRIRVRFADEDGTE---LRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L ET + + +P D F+ +K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHETGPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T +L + +L+ ++ V+ +A+ GG+S Sbjct: 174 VGNIYADEALWRARLHYERPTATLTRPRTA------ELLGHVRDVMNEALAVGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ G PC C +RR RS+ YC CQ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSHYCPKCQ 276 >gi|22299109|ref|NP_682356.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] gi|24636849|sp|P59065|FPG_THEEB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22295291|dbj|BAC09118.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] Length = 284 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 141/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ L R P F R + I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRAIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T P H + T + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTT------PQPPCPHTRVRWFFPTRAE---LRFVD 111 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L TP+ + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTL-----TPEQV-QRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|171464197|ref|YP_001798310.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692824|sp|B1XS61|FPG_POLNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171193735|gb|ACB44696.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 278 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V+ + + LR+ P + + G+ + + RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRKVSAVKIIDGRLRWPVPANLTKTLPGQTVNGIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E++ +++HLGM+G+ + +S P+K H+ VT+ K + +DPR Sbjct: 61 LLEMDTGY-LLIHLGMTGTLRVLPSS--DPLKT--HDRVTLEFG------KLSLRLHDPR 109 Query: 121 RFGFMDLVETSLK--YQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQ 174 +FG + S ++ L+ LG EP + F+ A L K++ +K LL Sbjct: 110 KFGAVLWHPKSKGPIKKFILLQKLGVEPFSSEFSGELGAEILYQTSRKRSVAVKQFLLAG 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V G+GNIY E+L+ A + P + L + + +L + ++ +L AI+AGGS Sbjct: 170 QAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQCS------RLAKAVRSILKKAIEAGGS 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SL+D+V+ DG G+F VY + G PC C I ++VQ R+T++C+ CQK Sbjct: 224 SLKDFVNSDGDPGHFMVQTKVYDRKGLPC-KVCKTPISQMVQGQRTTYFCSQCQK 277 >gi|238020718|ref|ZP_04601144.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] gi|237867698|gb|EEP68704.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] Length = 198 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 16/214 (7%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGS + + K H+HV I+ N T + Y+DPRRFG + L + Sbjct: 1 MSGSLRVWQGNAPAAGK---HDHVDIAFANGTLLR-----YHDPRRFGAI-LWLAGVAEH 51 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L+ LG EP + F A YL K+ +K AL+N KIV G+GNIY E+L++A ++ Sbjct: 52 HDLLKDLGVEPLSDDFTADYLFQALQKRGCPVKTALMNNKIVVGVGNIYANESLFQAAIA 111 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R +SL K L ++++L AI+ GGS+LRD+V+ +G GYFQ + V Sbjct: 112 PQRAAKSL------RKTECAALTAAVKQILRRAIETGGSTLRDFVNSEGKSGYFQQEYKV 165 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YGKT +PC ++CG I + V R TFYC CQ+ Sbjct: 166 YGKTDQPC-AHCGTPIVKTVIGQRGTFYCPTCQR 198 >gi|315125571|ref|YP_004067574.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] gi|315014084|gb|ADT67422.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] Length = 258 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 20/270 (7%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 N VT + +H ++R+ P G + + RRAKYLL+E E +I+ HLGMSG+ Sbjct: 9 NQVVTKVNIHNASMRWPVPDEVYQ-LEGLVVSSIERRAKYLLLECELGAAIL-HLGMSGN 66 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + + +P+K +H+HV L NN K R+ NDPRRFG + + ++ L Sbjct: 67 LRVVNAN--EPLK--KHDHVEFILANN---KALRL--NDPRRFGCC--LWQAPNEEHKLL 115 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LGPEP + F A + Q K +K ++N +V G+GNIY E+L++A + P ++ Sbjct: 116 AKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMNNAVVVGVGNIYANESLFKAGIDPRKE 175 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 + LI I+ L AI GG++L+D+ DG GYF VYG+ Sbjct: 176 AGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQLLVYGRK 229 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+PC+ NC + I RST +C CQK Sbjct: 230 GQPCV-NCDTALTEIRLGQRSTVFCEVCQK 258 >gi|256832888|ref|YP_003161615.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] gi|256686419|gb|ACV09312.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] Length = 309 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 35/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + VT + + R+ PH FSA G+ + +RR Sbjct: 1 MPELPEVETVRDGLARHVLGHQVTGVEVFREYSVRRHEGGPHDFSARLSGRVMRGWARRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI- 115 K+L E E ++ HLGMSG +I+ A+P +H HV + L +T + V+ Sbjct: 61 KFLWCEFDEPGEVLVAHLGMSGQLLIKEAQDAEP----RHPHVRVRLWTHTADGREGVVD 116 Query: 116 YNDPRRFGFMDLVET------------SLKYQYPPLRT------LGPEPADNSFNAIYLT 157 + D R FG++ L T S + P L L P A S L Sbjct: 117 FVDQRTFGYLALSPTVATADARPGGRGSERAVVPSLAEHIARDLLDPVLAVGSVQWEALL 176 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q +++G+GNIY E LWRA++ N + +L Sbjct: 177 DRCVGSKVAVKRLLLDQSVMSGVGNIYADEGLWRARIH------GESAANAVTRTAWRRL 230 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + + +V+ +A+ GG+S D YV+++G GYF + +VYG+ GEPC C IRR Sbjct: 231 LTHLGEVMGEALVQGGTSFDDLYVNVNGQSGYFDRSLNVYGREGEPC-RRCATPIRRSAF 289 Query: 277 AGRSTFYCTYCQK 289 RS+F+C CQ+ Sbjct: 290 MNRSSFWCPRCQR 302 >gi|224541517|ref|ZP_03682056.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] gi|224525554|gb|EEF94659.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] Length = 270 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + T+ I + + F + + I D+ R KYL Sbjct: 1 MPELPEVETVRRTLKNFVLHKTIDSIEVRYTRIIDGDVEAFVSTLIHQSICDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ + + I HL M G + I+ K +H+H+ +T+ T+ + YND R Sbjct: 61 IFILDHD-AFISHLRMEGKYNIKQ----KDEPYDKHDHIIFHMTDGTDLR-----YNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+ +YPPL LG EP D SF+ IY + H+ + +K LL+Q I GI Sbjct: 111 KFGRMQLVDKEHYREYPPLNRLGQEPMDASFDYIYP--RIHQSHLPIKQLLLDQSIFTGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E +R + P +TR + + K IL +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFRMGMDP--RTRG---DRLSKKRIL-ELIEVSSTILKEAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ SV+ + + C S C I++I AGR T+YC CQK Sbjct: 222 DANGIHGLFQVTLSVHAQ--KTC-SKCKGPIKKITIAGRGTYYCPNCQK 267 >gi|78212042|ref|YP_380821.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9605] gi|78196501|gb|ABB34266.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9605] Length = 278 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 144/294 (48%), Gaps = 23/294 (7%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + ++C R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRPRAIASPGGPDEFVAGLCGTTVGQWHRRGK 60 Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE + VHL M+G F H ++P K H V + N+K+ + + Sbjct: 61 YLMTALEPESGVWGVHLRMTGQFQW-HEQPSEPCK---HTRVRL-----WNSKEEELRFV 111 Query: 118 DPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V +++ L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSADFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +VAG GNIY E+L+ + ++P L +Q L +L + VL +I AGG+ Sbjct: 172 LVAGAGNIYADESLFASGIAPFTPAGQLNLQQ-------LERLRDALVNVLTISIGAGGT 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D+ ++G G + VY + GEPC NCG I+R +GRST +C CQ Sbjct: 225 TFSDFRDLEGVNGNYGGQAWVYRRGGEPC-RNCGTTIQREKLSGRSTHWCPTCQ 277 >gi|322437072|ref|YP_004219284.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] gi|321164799|gb|ADW70504.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] Length = 269 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 142/293 (48%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + + K F P + G +I V R K Sbjct: 1 MPELPEVETVANGVHDRVHGQRIDSVWTSGKPQTFKSPETEIAEVLTGARIDRVRRIGKT 60 Query: 60 LLIEL---EGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ +L G + +VHLGM+G ++ H + P H H + L+ + Sbjct: 61 VVADLTRSSGETAQFLVHLGMTGRLLVSHPE----VPLPPHTHAVLGLSGGNELR----- 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D RRFG + +V + Y P G EP + N F + +K ALLNQ Sbjct: 112 FVDARRFGRLSVVHEA--YGGP-----GAEPL--TINEEDFIALFKGRKLAIKAALLNQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++ G+GNIY E+L+RAK+ P R+ L +D L +L + +VL AI GGSS Sbjct: 163 LLHGVGNIYADESLFRAKIRPRRQAGKLT------RDELKRLRTALIEVLRHAIKLGGSS 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DYV DG G+FQ VYG+ GE C +CG +++I+ GR+T YC CQ Sbjct: 217 VSDYVDADGVRGFFQLEHKVYGRAGETC-KDCGTALKKIIVGGRTTVYCPTCQ 268 >gi|290969142|ref|ZP_06560667.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] gi|290780648|gb|EFD93251.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] Length = 280 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + + ++ N L+ F GK+I + RR KY Sbjct: 1 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPNVLKNTTVPGFRNRVVGKRIEGLVRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L G +++VHL M+G + +P + L + +K ++Y D Sbjct: 61 LQFLLSGEQAVLVHLRMTGKLLYRPALQEEP-------RARLRL----HLQKGLLVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG LV + P TLGP+ A +F A YL K +K LL+Q +VAG Sbjct: 110 RTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQHVVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P R+ ++ + + KL I +VL + GG+++RD+ Sbjct: 170 LGNIYVDEALFAAHIRPDRQAATISRTE------VGKLHAAIGRVLAQGLAHGGTTIRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q+ VYG+ G PC +CG + +GR T YC +CQ+ Sbjct: 224 VDSNGREGTNQSFLQVYGREGMPC-PHCGTRLVYTKVSGRGTRYCPHCQR 272 >gi|78778719|ref|YP_396831.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] gi|123554638|sp|Q31CK0|FPG_PROM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78712218|gb|ABB49395.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] Length = 293 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 150/310 (48%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R N FP F + + RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCR-NSTVAFPTEKEEFIKGLQNSLLYKWDRRG 59 Query: 58 KYLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 KYL+ EL + N ++VHL M+G F S +P K H I Sbjct: 60 KYLIAELKKIENENIKFPLKKLRQNNGFLVVHLRMTGYFKFIDNS-TQPCK-----HTRI 113 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQ 159 + + N + + Y D R FG M ++ L L +LGPEP +F+ YL Sbjct: 114 RVFDKKNNE---LRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKNFDEKYLKKV 170 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R +++ +N L L + Sbjct: 171 ISKRKKSIKAILLDQTIVAGIGNIYADESLYSAGISPFRAAKTIKKNE------LINLKE 224 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I + AGR Sbjct: 225 SIVNVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIEKQKIAGR 283 Query: 280 STFYCTYCQK 289 ST +C CQK Sbjct: 284 STHWCPNCQK 293 >gi|227548992|ref|ZP_03979041.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227078943|gb|EEI16906.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 274 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 153/294 (52%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE++RR L +V + ++ LH + +R + G ++ RR K Sbjct: 1 MPELPEVEVVRRGLDTHLVGRAFRSVEV-LHPRAVRGN-AVDLREVLPGLQVTGTGRRGK 58 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-SLTNNTNTKKYRVIYN 117 ++ + L+ +++VHL MSG ++ P H+ I +L ++ + + Sbjct: 59 FMWLTLDDGAALMVHLRMSGQMLV------GPPGTVTSPHLRIRALLDDVE-----LAFV 107 Query: 118 DPRRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + SL P + + P+P D F+ + ++S +K LLNQ Sbjct: 108 DQRTFG--SWLYASLGADGVPESISHIAPDPFDADFDIVQRARLVRTRSSAIKTVLLNQG 165 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IV+GIG+IY EALW A + P R+ RSL Q++ ++++ + V+ +A+ GG+S Sbjct: 166 IVSGIGSIYADEALWAAGVKPTRRARSLRQSDAV------QVLERSRDVMAEALAQGGTS 219 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G+ GYF + + YG+ G+ C CG +R++V GRS+ +C CQ Sbjct: 220 FDSLYVNVNGASGYFSRSLNAYGRAGQRC-RRCGTEMRKVVVNGRSSCFCPGCQ 272 >gi|38234118|ref|NP_939885.1| formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|81698520|sp|Q6NGH4|FPG_CORDI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|38200380|emb|CAE50068.1| Putative formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae] Length = 296 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 149/305 (48%), Gaps = 29/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+TD+ + H +++R + +G+++ + RR Sbjct: 1 MPELPEVEVVRRGLTPYVLGATITDVAVEHPRSIRTIEGGAAELIGSLQGREVTRIGRRG 60 Query: 58 KYLLIELEGN---------LSIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTNNT 107 K+L EL G+ ++VHLGMSG +I+ S P H + ++ + Sbjct: 61 KFLWFELTGHGDYACGFPQQGLLVHLGMSGQMLIKTQNSALHP-----HRRIRTTIVRSD 115 Query: 108 NTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D R FG+ VET+ + + + D L KKN Sbjct: 116 AQECFELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLKRENLARLIRKKN 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LLNQ+IV+GIGNIY E LW A++ P L L L++ Q+V Sbjct: 176 SEIKRVLLNQEIVSGIGNIYADEMLWAARIHPQTPASHLSVAQ------LSNLLEHGQRV 229 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A+D GG+S YV+++G GYF + YG+ G+ C CG I R A RS+ + Sbjct: 230 MNAALDQGGTSFDSLYVNVNGQSGYFDVSLHAYGQQGQAC-DRCGSNIIREKFANRSSHF 288 Query: 284 CTYCQ 288 C CQ Sbjct: 289 CPRCQ 293 >gi|328465599|gb|EGF36828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 1816] Length = 229 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 133/245 (54%), Gaps = 21/245 (8%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLT 104 G++I V RR K+LL +L N +I+ HL M G F + E +K H H+ Sbjct: 4 GQEIEGVRRRGKFLLFDLT-NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFE 56 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 ++T + + D R+FG M++ + + ++ LGPEP +F + K + Sbjct: 57 DHTELR-----FLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTS 111 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K ALL+QK+VAG+GNIY E + AK+ P R SL + K+I ++ + + + Sbjct: 112 RAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSL-----SDKEI-KRIFEATKSI 165 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + +A+ GGS++R YV+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C Sbjct: 166 MTEAVALGGSTVRTYVNSQGKLGQYQDKLKVYGKTDEPCVV-CGKPIEKIKLNGRGTHFC 224 Query: 285 TYCQK 289 CQK Sbjct: 225 PNCQK 229 >gi|240047522|ref|YP_002960910.1| formamidopyrimidine-DNA glycosylase [Mycoplasma conjunctivae HRC/581] gi|239985094|emb|CAT05087.1| DNA glycosylase [Mycoplasma conjunctivae] Length = 271 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + R L + +T I + N + P +F A + IID+ AK+ Sbjct: 1 MPELPEVVTVVRALSQKIIGKKITQIKIRSDNFIKEISPKNFIAEVKNATIIDIKNHAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ N II HL M+G + K K H+++ ++ + YND Sbjct: 61 ILIFLDNNKVIISHLRMNGKYF-----TYKSAKWFAHDYLQFIFSDQSVLN-----YNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L Y PL+ + EP D + + K N +K LL+QK++ G Sbjct: 111 RKFGTFHLRRLESLYSLAPLKNVASEPFDIDVEQFF--AKLQKINKTIKAVLLDQKLIGG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + K+SP+ ++L N +L I+ +++L +I GGSS+ Y Sbjct: 169 IGNIYADEICFATKISPLTIAKTL---NFQEVKLL---IENAKRILAASIKLGGSSINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K G+PC C Q I ++ AGR T+ C CQK Sbjct: 223 TSLNAKQGSFQNFLQVHTKVGKPC-PVCQQTIVKLKVAGRGTYVCNQCQK 271 >gi|115252785|emb|CAK98221.1| probable formamidopyrimidine-dna glycosylase protein [Spiroplasma citri] Length = 277 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 145/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+TD C N +P F +KI + R Sbjct: 1 MPELPEVETVRRILTKHVVGKTITD-CQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LL L+ + +I HL M G + TS +P QH V L + ++++ Y+ Sbjct: 60 KHLLFILD-DYVLISHLRMEGKYYF--TSKDEP-GEWQHIMVLFELDH-----QFQLRYH 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG M L + Q PL LG EP D YL + + K+ +K LL Q ++ Sbjct: 111 DTRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQNVI 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+ +K+ P T++L+ + +I+ + VL AID GG+++ Sbjct: 171 VGIGNIYANEILFASKIHPGEITKNLVDQD------YQNIIENTKLVLQKAIDEGGTTIA 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G F V+G+ CL NC Q+I +I GR T++C YCQK Sbjct: 225 TYHPEPGMDGKFLQQLKVHGRNKMECL-NCHQLIDKIFINGRGTYFCNYCQK 275 >gi|220912983|ref|YP_002488292.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] gi|219859861|gb|ACL40203.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] Length = 323 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 57/330 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L+ ++ T+ + L +++R DF + AT + DV Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIESVDVLDPRSIRRHALGVEDFIGNLQGAT----VSDV 56 Query: 54 SRRAKYLLIEL---------EGN-------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 RR K+L + L GN ++++ HLGMSG +++ + + +H Sbjct: 57 VRRGKFLWLPLVDGSAHQQAAGNGQAPPSRVALMAHLGMSGQLLMQDAG----VPDEKHL 112 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFM--------------DLVETSLKYQYPPLRTLG 143 V + L+ + ++ + D R FG + L E+ L + Sbjct: 113 KVRLHLSPSAGMPG-QLRFVDQRIFGGLFVTALVPTDDGGPGGLAESPLPLIAGEASHIA 171 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 +P D +F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T L Sbjct: 172 RDPLDPAFSFDRFYQRLRARKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTDKL 231 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 + + ++LI + V++DA+DAGG+S YV+++G+ GYF + + YG+ GEP Sbjct: 232 RRADA------FRLIDSARAVMLDALDAGGTSFDSLYVNVNGASGYFDRSLNAYGREGEP 285 Query: 263 C----LSNCGQMIRRIVQAGRSTFYCTYCQ 288 C + IRR RS++ C CQ Sbjct: 286 CKRCTAAGIHATIRREQFMNRSSYTCPVCQ 315 >gi|229820102|ref|YP_002881628.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] gi|229566015|gb|ACQ79866.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] Length = 310 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 30/305 (9%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + D+ R R A G RR Sbjct: 1 MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+ + L+ +++VHLGMSG ++ +P+H I ++ +++ Sbjct: 61 KFCWLTLDTGRALLVHLGMSGQLLVRGAG-QDAQDDPRHLRARIRFADDGE-----LLFI 114 Query: 118 DPRRFGFM---DLVETS------LKYQYP--PLRTLG--PEPADNSFNAIYLTHQFHKKN 164 D R FG++ DLV T+ P PL G + D + L + Sbjct: 115 DQRTFGYLTSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLLDPALRIDELVTAVRTRR 174 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K ALL+Q +V+G+GNIY EALWRA++ P R TR L P+ + +++ V Sbjct: 175 SAVKRALLDQSLVSGVGNIYADEALWRARVHPERATRGL------PRLAVRSVLESAAGV 228 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + DA+ GG+S YV ++G+ GYF + SVYG+TG PC CG I R RS+ + Sbjct: 229 MQDALAQGGTSFDALYVDVNGASGYFDRSLSVYGQTGRPC-PRCGTAIVRSEFMNRSSHW 287 Query: 284 CTYCQ 288 C CQ Sbjct: 288 CPTCQ 292 >gi|332710075|ref|ZP_08430030.1| DNA lyase [Lyngbya majuscula 3L] gi|332351218|gb|EGJ30803.1| DNA lyase [Lyngbya majuscula 3L] Length = 282 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 149/306 (48%), Gaps = 41/306 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IR L V + ++ L R P F A + I D RR K Sbjct: 1 MPELPEVETIRLGLNQVTTGQEIQGGEVLLSRTIAHPISPKDFLAQLKTVTISDWHRRGK 60 Query: 59 YLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + + VHL M+G + S +P P+H V + NN + Sbjct: 61 YLLAKLTKSDTDQAGWLGVHLRMTGQLL--WLSQDQP--QPKHTRVRLFFPNNQELR--- 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQFHKK 163 + D R FG M + PP L+ LGPEP F+ YL + H + Sbjct: 114 --FIDQRTFGRM--------WWIPPSHLPETIITGLKQLGPEPFSQEFSTDYLVSKLHHR 163 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K ALL+Q +VAGIGNIY EAL+ + + P +L ++ G + + KL + + Sbjct: 164 QRAIKTALLDQSLVAGIGNIYADEALFLSGIRP----ETLCKDLGLEQ--IEKLSIAVIQ 217 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL AI++GG++ D++++ G G ++ VYG+TGEPC C I+R GRS + Sbjct: 218 VLEKAIESGGTTFSDFINVQGVNGNYKGIAWVYGRTGEPC-RICSTPIQRTKLVGRSAHF 276 Query: 284 CTYCQK 289 C CQ+ Sbjct: 277 CPNCQR 282 >gi|319948354|ref|ZP_08022498.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] gi|319437985|gb|EFV92961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] Length = 303 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 90/303 (29%), Positives = 151/303 (49%), Gaps = 31/303 (10%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V + + ++ R R A G+ + RR Sbjct: 1 MPELPEVEVVRRGLADHVVGRTLVSVEVTGARTARRQPGGAAEIVARLTGRTVSGARRRG 60 Query: 58 KYLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + L+G+ + ++VHLGMSG ++ A P++ H H L + + Sbjct: 61 KYLWLTLDGDDAAGADCLLVHLGMSGQMLVTGAG-APPVR---HLHARAVLDDGNELR-- 114 Query: 113 RVIYNDPRRFGFMDLV------ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + D R FG +V + S P + +P ++ ++ + ++++ Sbjct: 115 ---FVDQRTFGGWTVVPLAGARDGSGVLLPAPAAHIAADPFESGYDPVAAARVIRRRDTE 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q +V+GIGNIY EALWR+ L R++ ++ T ++++ + V+ Sbjct: 172 IKRLLLDQTVVSGIGNIYADEALWRSGLHGRRRSGAITLRAVT------RVLEHARDVMA 225 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DA+DAGG+S YV+++G+ GYF + VYG+ G PC S CG + R R + +C Sbjct: 226 DALDAGGTSFDALYVNVNGASGYFDRSLDVYGRAGLPC-SRCGTAVVREDFMNRGSHFCP 284 Query: 286 YCQ 288 CQ Sbjct: 285 VCQ 287 >gi|260219875|emb|CBA26844.1| Formamidopyrimidine-DNA glycosylase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 271 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 146/296 (49%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + T+ + + K LR+ A G ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRITGATIQGVRMG-KPLRWPLQCE-PAQLAGLRVRGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L L ++VHLGMSGS I + P H + + T + +DPR Sbjct: 59 LIDLSDGL-LLVHLGMSGSVIFDRH------LPPAGVHDHFDMVTDLGTLRL----HDPR 107 Query: 121 RFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 RFG + D V L L LG EP + F+ ++ + +K LL Sbjct: 108 RFGAVVFAAGESDPVAQKL------LGHLGVEPLGDGFDPAAFLAGLRQRKAPIKQVLLA 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++V G+GNIY EAL+ A + P S+ K + KL ++ VL A++ GG Sbjct: 162 GEVVVGVGNIYASEALFLAGIRPTSPANSI------SKPRVAKLHAAVKDVLSRAVEKGG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRD+ + +G GYFQ +VYG+ G PC C +R I Q RST+YC CQK Sbjct: 216 STLRDFSNANGESGYFQLEANVYGREGAPC-RVCATPVRAIRQGQRSTYYCMVCQK 270 >gi|220905063|ref|YP_002480375.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869362|gb|ACL49697.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 313 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 151/325 (46%), Gaps = 50/325 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAAT---RGKKIIDVSRRA 57 MPELPEVE + R L ++ + D + LR H S RG +I DV RR Sbjct: 1 MPELPEVETVARTLRPHVQGRIIADA----QVLRPTSQHPLSLPLQDLRGCRIADVVRRG 56 Query: 58 KYLLIELE------------GNLSIIVHLGMSGSFII--------EHTSCAKPIK----- 92 K LL+ L+ NL + VHL M+G + HT C +K Sbjct: 57 KLLLLLLDPTEAEKTCVRGMQNLCLAVHLRMTGRLMTYAAKTSPGTHTRCILDLKALPAT 116 Query: 93 ---------NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG 143 P + + + R+ ++D R FG M + ++P R LG Sbjct: 117 AGGQAAAECGPAGGAGVPGAEDCLTSGERRLFFDDVRAFGTMLAGTPEMFARWPFWRELG 176 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 PEP D K S +K LL+QK++AG+GNIY E+L+ A + P RK L Sbjct: 177 PEPLD--ITEAAFAASIAAKRSAIKAVLLDQKMLAGVGNIYADESLFAAGIDPRRKGSEL 234 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 + +L+Q ++ VL+ +I GSS+RDY DG++G FQN F+VYG+ G+ C Sbjct: 235 TRLQAD------RLLQCLRDVLLLSISQCGSSIRDYRDADGNVGAFQNTFAVYGRGGQKC 288 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 CG ++ + AGRST +C CQ Sbjct: 289 -KTCGSLLEKAKVAGRSTVFCPQCQ 312 >gi|156743763|ref|YP_001433892.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] gi|189044671|sp|A7NQM8|FPG_ROSCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156235091|gb|ABU59874.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] Length = 283 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--------PHHFSAATRGKKIID 52 MPELPEV+ +L + + + + R D+ P F G+++ Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARV------ERLDWTRMVETPSPDEFIRLLTGRQVRG 54 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 RRAK++L+ L+ ++ +HL MSGS + H + A+P K H H+ + L + Sbjct: 55 WDRRAKWILLFLDDGWTLALHLRMSGSLTV-HPAEAQPDK---HTHLALRLEDGRQ---- 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + + DPR+FG L++++ G EP ++F L + +K LL Sbjct: 107 -IFFLDPRKFGRARLLDSAGLAALDAAH--GDEPLSDAFTVERLASLLRNRKRAIKPLLL 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++AGIGNIY EALWRA++ P+R L + L I+ L A+ G Sbjct: 164 DQSVIAGIGNIYADEALWRARIHPLRPAADLSAAE------VAALHDGIRAALRQALANG 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+LRDY + G+ G Q F+ Y + G PC CG I + V A R T YC CQ Sbjct: 218 GSTLRDYRNSYGAGGTNQEHFNAYDREGRPC-PRCGATIIKTVVAQRGTHYCPACQ 272 >gi|284044548|ref|YP_003394888.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] gi|283948769|gb|ADB51513.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] Length = 284 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+ + ++ R+ P+ A G++I RR Sbjct: 1 MPELPEVETVRRQLEPRLVGRTLVAYAV--RDARWTEPRSPNEVVAPLVGRRIEGFHRRG 58 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL+ E E L +++HL M+G+ + + P+ T + + R + Sbjct: 59 KYLIWEAEDELFLLIHLRMTGNLLYD---------APEGTLYTRAHFGFDDGHDLRFV-- 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG L+ + LG EP + F A +L + +K LL+QK + Sbjct: 108 DPRRFGTGWLLAGQSELDAYLDARLGVEPFSDGFTAEHLRRLARGSRAPIKAFLLDQKRI 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAGGSSL 236 AGIGNIY EAL+R+++ P+R+ G ++L+++ + L IDA G+S+ Sbjct: 168 AGIGNIYADEALFRSRIHPLRQA-------GRVTTAQWELLRDAVVDALSAGIDARGASI 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ +DG+ G FQ+ F ++ + + CL CG IR+I+ AGR T+ C +CQ Sbjct: 221 DDFRDLDGARGSFQDRFLIHRRADDGCL-ECGGPIRKILAAGRGTYVCEHCQ 271 >gi|226305919|ref|YP_002765879.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] gi|259647148|sp|C0ZXQ5|FPG_RHOE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226185036|dbj|BAH33140.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] Length = 289 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 147/296 (49%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + LH + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + ++VHLGMSG +++ + + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQPPT----VDWEKHLRIRLALDSGADLR-----F 111 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LVE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R SL + PK L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIAESLTR----PK--LRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|288923599|ref|ZP_06417709.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] gi|288345061|gb|EFC79480.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] Length = 306 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 148/316 (46%), Gaps = 46/316 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + H + +R P F+AA G+ + SRR Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIDGVEVYHPRAVRRHAAGPDDFAAALLGRTVTTASRRG 60 Query: 58 KYLLIELEGN-----------------------LSIIVHLGMSGSFIIEHTSCAKPIKNP 94 KYL + L S++ HLGMSG ++ P +P Sbjct: 61 KYLWLGLSPQGAEAAGLEAVGAAAAGAGAAGAGESLLGHLGMSGQLLV------VPPDSP 114 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNA 153 H+ + ++ R + D R FG + +V + P + + P+P F+ Sbjct: 115 DQVHLRVRFRFGDGGRELRFV--DQRTFGGLAVVSGA---DLPASIAHIAPDPLAADFDV 169 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + ++ + LK ALL+Q +++G+GNIY EALW A+L R T ++ + Sbjct: 170 EHFVDALRRRRTGLKRALLDQTLISGVGNIYADEALWAARLHYARPTETVSRAEA----- 224 Query: 214 LYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 ++L++ + V+ A+ AGG+S R YV +G G F+ + VYG+ GE C S C IR Sbjct: 225 -HRLLEAARTVMTAALAAGGTSFDRLYVSTEGVSGLFERSLEVYGREGEQC-SRCAAPIR 282 Query: 273 RIVQAGRSTFYCTYCQ 288 R RS++ C CQ Sbjct: 283 REAFMNRSSYTCPVCQ 298 >gi|46446526|ref|YP_007891.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] gi|81697648|sp|Q6MCT3|FPG_PARUW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46400167|emb|CAF23616.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] Length = 276 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/296 (35%), Positives = 145/296 (48%), Gaps = 28/296 (9%) Query: 1 MPELPEVEIIRRNLM---MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEV I ++L ++ K + T+I K L P F +G+ I +V RR Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEI-FWPKTLAVPTPEIFCQQVQGQSIQNVDRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KY++ +L + +IVHL M+G F + + P +V I N N + R ++ Sbjct: 60 KYIIFQLSNQMFLIVHLRMTGRFQFVTS------QTPASPYVRIQF-NFENGDQLR--FH 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG LV + + LGPEP +SF + + LK+ LL+Q + Sbjct: 111 DTRKFGRWYLVSDVEEI----IGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQSFI 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 G+GNIYV EALW AKL P LI N L L I+ VL I A G++L Sbjct: 167 VGLGNIYVDEALWEAKLHP------LIPANQINLKHLKILYHSIKYVLEKGIQARGTTLG 220 Query: 237 ---RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +DGS G Q +V+ KTG PC CG +I +++ A RST C CQK Sbjct: 221 PGRTHYYRLDGSKGEHQTLLNVFRKTGHPC-PRCGHLIEKLIVAQRSTHICPICQK 275 >gi|37522976|ref|NP_926353.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] gi|39931205|sp|Q7NFW7|FPG_GLOVI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|35213979|dbj|BAC91348.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] Length = 284 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 147/299 (49%), Gaps = 31/299 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIID-VSRR 56 MPELPEVE +RR+L++ + V + + R + +P F +G+ D + RR Sbjct: 1 MPELPEVETLRRDLLIHLPGERVVGVEVLRSD-SVGYPADPAIFIEQMQGQIFSDRMLRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYLL+ ++ VHL MSG + C + P H V I + + + + Sbjct: 60 GKYLLLYFARGAALGVHLRMSGRLLWR---CGEAPLEP-HTRVRIPMASGHELR-----F 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT------LGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG + L+ + PP R LGPEP F+ YL +F +N +K+A Sbjct: 111 EDMRVFGRLWLIPVGV----PPERVMGGLTRLGPEPFAEMFDGPYLAGRFAGRNQPVKSA 166 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++VAG+GNIY EAL+ + + P + G L +L + + KVL I Sbjct: 167 LLDQQLVAGVGNIYADEALFSSGIHPA------LPVGGLDAAALERLHRAVVKVLEAGIA 220 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G++LR+Y G G + VYG+ G+PC C I RI AGRST +C CQ+ Sbjct: 221 QRGATLRNYTDAQGINGNYAGTAWVYGRKGQPC-RVCNTPIERIRLAGRSTHFCPTCQR 278 >gi|317968874|ref|ZP_07970264.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0205] Length = 294 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 143/297 (48%), Gaps = 26/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L + T+ ++ R P F +A +G + RR K Sbjct: 10 VPELPEVETVRRGLERQTRGFTIERVEVLRARAIAAPPVPAQFCSALQGCSVDQWMRRGK 69 Query: 59 YLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYR 113 YL+ L E VHL M+G F+ T+ K P H V N + Sbjct: 70 YLMASLKRSEEDAGHWGVHLRMTGQFLWMETA-----KEPCSHTRVRF-----WNPEGQE 119 Query: 114 VIYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M V L+ L+ LGPEP +F Y+ + + +K AL Sbjct: 120 LRFVDLRSFGEMWWVPPGKPLESVMTGLKRLGPEPFSAAFTPQYMRQKLKGSSRAIKTAL 179 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY E+L+ + ++P + SL L +L + +VL +I A Sbjct: 180 LDQALVAGVGNIYADESLFMSGIAPEERAGSLKLKQ------LERLHSALVEVLTTSIGA 233 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G+ G + NA VY +TGEPC CG IRR GRS+ +C CQ Sbjct: 234 GGTTFSDFRDLSGTNGNYGNAAWVYRRTGEPC-RVCGTPIRRDKLGGRSSHWCPSCQ 289 >gi|226227840|ref|YP_002761946.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226091031|dbj|BAH39476.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 279 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 28/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPE E I R+L ++ V D+ + R + LR +A G +I V RRAK Sbjct: 1 MPELPETETIARDLHAMVVGSVVRDVSVPRPDVLREIAAADLCSALSGGRITRVWRRAKL 60 Query: 60 LLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++L N ++V +G +++ + P ++ V +SL + Sbjct: 61 IVLDLTLADRQNSHLVVQPRFTGGLLVDDGTL--PTSEFAYSCVAMSLGDGRTLH----- 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D RR G + L+ + +Y LGPEP D +F+A + + ++K L++Q+ Sbjct: 114 YRDVRRLGTVALMPEARFLEYSS--GLGPEPLDQTFDATAFSGCVRLSHQSIKVVLMDQR 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIY EALWRA + P R+ SL +L ++ VL +I A G+S Sbjct: 172 RLAGVGNIYANEALWRAGIDPSREASSLTFAEAE------RLHTALRDVLTASIAARGTS 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 RDY G G F + YG+ GEPC CG RR+V GRST +C CQ Sbjct: 226 FRDYRDARGERGTFVEQLAAYGRGGEPC-PRCG---RRLVVTHAVDGRSTVFCPGCQ 278 >gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae TN] gi|221230353|ref|YP_002503769.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] gi|7531120|sp|O69470|FPG_MYCLE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789446|sp|B8ZRZ2|FPG_MYCLB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3150225|emb|CAA19197.1| formamidopyrimidine-dna glycosylase [Mycobacterium leprae] gi|13093429|emb|CAC30611.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae] gi|219933460|emb|CAR71753.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] Length = 282 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H + +R P + G +I + RR Sbjct: 1 MPELPEVEVVRRGLQDYIVGKTITAVRVHHPRAVRRHVAGPTDLTNRLLGTRINGIDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWFLLDTDIALVVHLGMSGQMLLGTV--------PRVDHVRISALFDDGTV---LNFT 109 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R G DL+ P+ L +P D F+ + K+S LK LL+Q Sbjct: 110 DQRTLGGWLLADLMTVDGSVLPVPVAHLARDPFDPRFDVEAVVKVLRCKHSELKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V+GIGNIY EALWRA++ R +L + L ++ V+ D++ GG+ Sbjct: 170 QTVSGIGNIYADEALWRAEVHGARIAATLTRRQ------LAAVLDAAADVMRDSLAKGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GE C CG ++ R RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEGC-RRCGAVMHREKFMNRSSFYCPRCQ 277 >gi|71064918|ref|YP_263645.1| formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] gi|90101313|sp|Q4FUU7|FPG_PSYA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71037903|gb|AAZ18211.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] Length = 309 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/321 (32%), Positives = 158/321 (49%), Gaps = 50/321 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + A + V RRAKYL Sbjct: 1 MPELPEVETTKTSLAPLL-GQKVTNVQVFQPKLRWSIPDNL-ADLVDYTLDSVERRAKYL 58 Query: 61 LIEL-----EG--------NLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 ++ +G NL ++VHLGMSGS + +H + K H+H+ +S Sbjct: 59 ILNFIPLADDGISSTVQPRNLQPRQLLVHLGMSGS-LQQHNHASDKRK---HDHLIMSFI 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-- 162 +T+ ++ Y DPRRFG + +E +Y L LGPEP ++F A YL H + Sbjct: 115 GADSTQT-QLHYYDPRRFGSILWLE---EYGDKLLNHLGPEPLSDAFTADYLYHLIQRSR 170 Query: 163 -----KNSN----------LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +NS +K+ ++ Q+ V G+GNIY E+L+ + + P N Sbjct: 171 QSIQTQNSKSIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPA------N 224 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 + L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ G C +C Sbjct: 225 EVSYAQIVILVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGNAC-PHC 283 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 + I GR++ YC CQ Sbjct: 284 ESTLENIKLNGRASVYCPLCQ 304 >gi|57233872|ref|YP_182098.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] gi|57224320|gb|AAW39377.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] Length = 270 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ +M + +T + L K L F+ G ++ +SRR KY Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRMEALWAKTL-CPPETEFNKLVSGLQVTGLSRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I L G L I VHL MSG A+ + P+ L N +V + D Sbjct: 60 IIISLSGGLFISVHLKMSGGLTAVK---AETEQFPRFTRAVFHLENGE-----QVYFTDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG ++L+ TSL L LGPEP + F L + + +K LL+QK++AG Sbjct: 112 RKFGRINLL-TSLDTI---LEKLGPEPLEGDFTPEVLGKRLSGRKGPIKAVLLDQKVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y EAL++A L+P+R SL + T KL IQ VL AI G+S+ Y Sbjct: 168 VGNMYADEALFKACLNPLRPADSLSKAEVT------KLHSAIQSVLHKAIQNKGASVSTY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ +YC +CQ Sbjct: 222 HRPDGSKGGAQLEFNVAHRRGEVC-PECGAPINRQLIRQRACYYCPHCQ 269 >gi|257482980|ref|ZP_05637021.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 231 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/249 (34%), Positives = 131/249 (52%), Gaps = 18/249 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ G + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREA------GGVSRARYLKLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYF 249 DG GYF Sbjct: 223 GGDGKPGYF 231 >gi|241888677|ref|ZP_04775984.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] gi|241864700|gb|EER69075.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] Length = 285 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 147/306 (48%), Gaps = 39/306 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-------------FSAATRG 47 MPELPEVE I+ L V+ N + +I + + H FS + +G Sbjct: 1 MPELPEVENIKFGLEEVVINKKIINITYSK---VVEDSHKVGKMAIVKQKLSAFSDSVKG 57 Query: 48 KKIIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTN 105 K+I +SRR KYL L EG II H GM+G+F + KN +H HV L+ Sbjct: 58 KEIEKLSRRGKYLYFTLNEG--YIITHFGMTGAFFLVKDIAEITNKNYYKHQHVIFELST 115 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-- 163 +++Y+D RRFG + ++ K++ P L PEP D +L+ K Sbjct: 116 GE-----KLVYSDIRRFGELRYIDDITKFK--PFINLAPEPFDKKAKKYFLSKLEENKYR 168 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++K LL + G GNIY CE L+R K+ P+ K L + K+ L+K E+ Sbjct: 169 EQSIKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKK---KESLFK---ELID 222 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS++ DYVH DG G QN +YGK P G + + GRS+ + Sbjct: 223 ILDFAIKEGGSTISDYVHADGGEGNMQNFHQIYGKKVCP----LGHEVENVTIKGRSSHF 278 Query: 284 CTYCQK 289 C CQK Sbjct: 279 CPICQK 284 >gi|318042468|ref|ZP_07974424.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0101] Length = 294 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE +RR L + + ++ R P F +A G + RR K Sbjct: 13 VPELPEVETVRRGLEQQVSGFEIARVEVLRARAIASPPLPELFCSALEGCTVQQWLRRGK 72 Query: 59 YLLIELEGNLSII----VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 YL+ L+ + VHL M+G F+ +T P + +H V I NT++ + Sbjct: 73 YLMATLQRGGADAGHWGVHLRMTGQFLWMNT----PAEPCRHTRVRI-----WNTQEQEL 123 Query: 115 IYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG M V L+ LR LGPEP F+A +L + ++K ALL Sbjct: 124 RFVDLRSFGEMWWVPPGEPLESVMTGLRRLGPEPFSTDFSAEHLAAKLAGSTRSIKTALL 183 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +VAG+GNIY E+L+ ++++P + L L +L + +VL +I AG Sbjct: 184 DQALVAGVGNIYADESLFMSRIAPQTPSGQLAPAQ------LKRLHSALVEVLEASIGAG 237 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ D+ + G+ G + NA VY ++GEPC CG I+R GRS+ +C CQ Sbjct: 238 GTTFSDFRDLTGTNGNYGNAAWVYRRSGEPC-RVCGTPIQRDKLGGRSSHWCPNCQ 292 >gi|257068989|ref|YP_003155244.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] gi|256559807|gb|ACU85654.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] Length = 313 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 151/323 (46%), Gaps = 47/323 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+TD+ L + + AA G + V+RR Sbjct: 1 MPELPEVEVVRRGLAPRTLGRTITDVELLDARIIRRQAGGADRLRAALEGSALTAVARRG 60 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSF---------IIEHTSCAKPIKNP-QHNHVTI 101 K+L L + +++ HLGMSG + P +P +H +++ Sbjct: 61 KFLWWRLADPDGADTGEALMGHLGMSGQLRFATPGAPAAAPSAASEGPASDPLRHRRLSL 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFG------FMDLVETSLKYQYPPLRTLGPEPA-------- 147 L + R+ D R FG ++ + SL P L PE A Sbjct: 121 HLDDGA-----RLDLVDQRLFGGLWTSPLVEAADGSLAAVGSPDALL-PEGAAHIARDLL 174 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D + + + + S +K LLNQ+IV+GIGNIY EALW A +TR Sbjct: 175 DPAADLPAIARALRTRRSAVKTLLLNQEIVSGIGNIYADEALWAA------RTRYDTPGT 228 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 + +++ + V+ A++ GG+S YV++DG GYF + + YG+ GEPC + Sbjct: 229 ALSQRRALGILRAARAVMERALEVGGTSFDALYVNVDGRSGYFARSLAAYGREGEPC-TR 287 Query: 267 CGQMIRRIVQAGRSTFYCTYCQK 289 CG+++RR+V GRS+ YC CQ+ Sbjct: 288 CGRLLRRVVHQGRSSHYCPRCQR 310 >gi|227494680|ref|ZP_03924996.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] gi|226831862|gb|EEH64245.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] Length = 299 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 32/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE IR L + + ++ + + P F G KI RR Sbjct: 1 MPELPEVETIRLGLAGRVVGKEIAEVSVWNTRMVRTQPGGAQEFIYLLEGAKIQAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L +EL+ ++++HLGMSG H KP + +H H+ + T+ T + Sbjct: 61 KFLWLELDDAKALVIHLGMSGQV---HAWDEKPAERRKHEHIRVEFTDGTG-----YTHV 112 Query: 118 DPRRFGFMDLVE-TSLKYQYPPLRT------------LGPEPADNSFNAIYLTHQFHKKN 164 D R FG ++V+ +P R + +P D FN + + Q + Sbjct: 113 DQRTFGKAEVVDLVPCADGFPGGRGSKMPMMPASATHIARDPLDLGFNVVTVARQLRRSA 172 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL Q++V+GIGNIY EAL+ L SL Q L++ Q+V Sbjct: 173 VAVKTLLLKQELVSGIGNIYADEALFACGLHGSVPGSSLTQKQAV------ALLEAAQQV 226 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A++ GG+S YV++ G GYF + VYG+ G+ C CG +I R GRS Y Sbjct: 227 MRAAVEVGGTSFDSLYVNVSGEPGYFAISLQVYGRNGQAC-HKCGNLILRENIGGRSHHY 285 Query: 284 CTYCQK 289 C CQ+ Sbjct: 286 CGTCQR 291 >gi|309810299|ref|ZP_07704137.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] gi|308435727|gb|EFP59521.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] Length = 350 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 73/351 (20%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V + + + R R P H + A G+++ RR Sbjct: 3 MPELPEVEVVRRGLDDHVVGRAFVTSRVTGSRVARRHLPGPQHLADALLGRRVASAQRRG 62 Query: 58 KYLLIELE-----------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 KYL + E + ++++HLGMSG ++E S P++ Sbjct: 63 KYLWMTFEDAAPGSDGSADATVPLDRREGAVADDALVIHLGMSGQVLVE--SADSPLE-- 118 Query: 95 QHNHVTISLTN--------------------------------NTNTKKYRVIYNDPRRF 122 +H H L+ + ++ + D R F Sbjct: 119 KHAHAVFDLSAPVKLSPPRKSGERAGSGEAVDAPGVTDASERPRSEPSAQQMRFVDQRTF 178 Query: 123 G--FMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 G F+D + + + P + + P+P + +F+A K+ +K LL+Q IV+G Sbjct: 179 GGLFLDDLTVAHGREVPASIAHIAPDPLEEAFDAGAAARLMRSKDVAIKRMLLDQGIVSG 238 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 IGNIY EALWRA++ R R L + L ++ Q V+ A+D GG+S Sbjct: 239 IGNIYADEALWRAQVHGRRPGRMLTKTQ------LIGVLTAAQDVMRSALDHGGTSFDAL 292 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + YG+ G+PC CG +I R RS+ +C CQK Sbjct: 293 YVNVNGASGYFDRSLDAYGQQGKPC-RRCGTLIVREQFMNRSSHFCPTCQK 342 >gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229321700|gb|EEN87497.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 289 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 147/296 (49%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + LH + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + ++VHLGMSG +++ + + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQPPT----VDWEKHLRIRLALDSGADLR-----F 111 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LVE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R +L + PK L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIAETLTR----PK--LRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|239917410|ref|YP_002956968.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414104|ref|ZP_06245846.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838617|gb|ACS30414.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 305 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 28/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAAT---RGKKIIDVSRR 56 MPELPE E++RR L + ++ L ++LR P A RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRS-PGGADALRERLRGARLAEPARR 59 Query: 57 AKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L + L EG+ +++VHLGMSG +++ A + +H + + +T + + + Sbjct: 60 GKFLWLPLAEGDDAVVVHLGMSGQILVDEPGAA----DQRHLRLRLPVTAADGSARE-LR 114 Query: 116 YNDPRRFG--FMDLV---ETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D R FG ++D + + + + P + +P F+ + + ++ S LK Sbjct: 115 FVDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPAAVHARLARRRSTLKR 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A+ Sbjct: 175 ALLDQSLVSGIGNIYADEALWGARLHPERPTERMRRAD------TLRLLAAVQDVMRRAL 228 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQA---GRSTFYC 284 + GG+S YV++DG GYF + + YG+TG+PC + + RIV+ R++ C Sbjct: 229 EVGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPCRRCAAEGVDSRIVREPFMNRASHLC 288 Query: 285 TYCQ 288 CQ Sbjct: 289 PRCQ 292 >gi|313899426|ref|ZP_07832936.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] gi|312955714|gb|EFR37372.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] Length = 276 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + +T + N+ +P F GK I R K Sbjct: 1 MPELPEVETVVRTLEHQLDRVMITGCEVFWNNI-IGYPDAAIFCRDIVGKTIQGYYRHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y+ +L G++ I H+ M G F ++ +P +H HV + L++ + Y+D Sbjct: 60 YMRFDL-GDMEWICHMRMEGKFYVQQPQ--EPYD--KHVHVILQLSDGRQLR-----YHD 109 Query: 119 PRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M L E YP + +G + D A ++ H HKK + LK LL+Q+ + Sbjct: 110 TRKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLDQRYI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E + + P + N+ KD +LI I+++L AI AGG+++R Sbjct: 170 AGIGNIYADEICFAMHMHP-----ETMINHLRKKD-FEELIYHIRRILNGAIRAGGTTIR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C CG I++IV A R T +C CQ+ Sbjct: 224 SYTSQLGVDGRFQLKLKVHAKKGEAC-PVCGTKIKKIVVATRGTCFCPTCQR 274 >gi|113954166|ref|YP_729781.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] gi|113881517|gb|ABI46475.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] Length = 290 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 146/305 (47%), Gaps = 34/305 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + ++D +C R P F + ++ + RR K Sbjct: 1 MPELPEVETVRRGLANRLDQFVISDLEVCRDRAIASPGGPECFESGLLNCRVGNWMRRGK 60 Query: 59 YLLIEL------EGNLS------IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTN 105 YL EL E N + VHL M+G F IE + P H + N Sbjct: 61 YLYSELYRPGSAEANSAEESAGYWGVHLRMTGQFQWIEDDT-------PPCKHTRVRFWN 113 Query: 106 NTNTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 K + + D R F M V +T+++ L+ LGPEP F YL +F Sbjct: 114 ---AKGQELRFVDLRSFAEMWWVPPDTAVESIITGLKKLGPEPFSQDFKTQYLQERFKGS 170 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++K ALL+Q IVAG GNIY E+L+ A + P L + L KL + + + Sbjct: 171 TRSIKAALLDQSIVAGTGNIYADESLFAAGICPQTPAGQLNRKQ------LEKLRECLIE 224 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L +I AGG++ D+ ++G G + +VY +TG+PC CG+ I RI AGRST + Sbjct: 225 ILELSIGAGGTTFSDFRDLEGVNGNYGGQAAVYRRTGQPC-PKCGKAIERIKLAGRSTHW 283 Query: 284 CTYCQ 288 C+ CQ Sbjct: 284 CSSCQ 288 >gi|260435903|ref|ZP_05789873.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] gi|260413777|gb|EEX07073.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] Length = 278 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 142/293 (48%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + ++C R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRSRAIASPGGPEAFVAGLCGMTVGQWQRRGK 60 Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE + VHL M+G F H ++P K H V + N+K+ + + Sbjct: 61 YLMAALEPEGGVWGVHLRMTGQFQW-HEQPSEPCK---HTRVRL-----WNSKEQELRFV 111 Query: 118 DPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V +++ L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSTDFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG GNIY E+L+ + ++P L L +L + VL +I AGG++ Sbjct: 172 LVAGAGNIYADESLFASGIAPYTPAGQLELKQ------LERLRDALVNVLTISIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + G+PC S CG I+R +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGDPCRS-CGTPIQREKLSGRSTHWCPTCQ 277 >gi|145296036|ref|YP_001138857.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum R] gi|166215621|sp|A4QFD9|FPG_CORGB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|140845956|dbj|BAF54955.1| hypothetical protein [Corynebacterium glutamicum R] Length = 286 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 147/306 (48%), Gaps = 39/306 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT-VTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T V+ LH + R A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L +EL +L ++VHLGMSG +I+ PI H I L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDA--PIS--PHLRAKIELDNGDE- 115 Query: 110 KKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRT--LGPEPADNSFNAIYLTHQFHKKN 164 V + D R FG+ DLV+ P R + + D S + + + Sbjct: 116 ----VWFVDQRTFGYWWLGDLVDGV------PERVSHIATDVLDESADFSAIARNLKSRK 165 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V Sbjct: 166 SEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDV 219 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A+ GG+S YV+++G+ GYF + + YG+TGEPC CG I R R + Y Sbjct: 220 MTKALAQGGTSFDALYVNVNGNSGYFSLSLNAYGQTGEPC-GRCGTQIVRENFMNRGSHY 278 Query: 284 CTYCQK 289 C CQK Sbjct: 279 CPNCQK 284 >gi|119492791|ref|ZP_01623877.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] gi|119452944|gb|EAW34116.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] Length = 301 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 150/314 (47%), Gaps = 41/314 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L V +N T+ ++ L R F G+ I RR K Sbjct: 1 MPELPEVETVKRGLNQVSRNQTIQGGEVLLKRTLAHPVSIDEFITGLSGQAIAGWYRRGK 60 Query: 59 YLLIELE---------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 YLL E N + VHL M+G + S +P+ +H Sbjct: 61 YLLAEFSTQFNPNSDDSQNLEFSDLQTFSNGGLAVHLRMTGQLL--WVSQDEPLS--KHT 116 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIY 155 V + N + + D R FG M + +++ L+ LG EP F+ Y Sbjct: 117 RVRLFFPNRQELR-----FVDQRTFGQMWGIPPNVEVSKIVTGLQKLGHEPFSEEFSIKY 171 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 LT QF+++ +K ALL+QK+VAG+GNIY E L+ + +SP + L TP I Sbjct: 172 LTTQFYRRQRPIKTALLDQKLVAGVGNIYADETLFLSGISPTTRCAEL-----TPAQI-E 225 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L ++ +VL AIDAGG+++R+++++ G G + VY + G+PC C I R+ Sbjct: 226 TLHAQLVQVLKTAIDAGGTTVRNFLNVAGVNGNYAGQAWVYNRAGQPC-RVCQTPIERLK 284 Query: 276 QAGRSTFYCTYCQK 289 AGRS +C CQK Sbjct: 285 LAGRSAHFCPRCQK 298 >gi|302036203|ref|YP_003796525.1| bifunctional DNA-formamidopyrimidine glycosylase/DNA lyase [Candidatus Nitrospira defluvii] gi|300604267|emb|CBK40599.1| DNA-formamidopyrimidine glycosylase and DNA-(apurinic or apyrimidinic site) lyase [Candidatus Nitrospira defluvii] Length = 287 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+ R L + TV D + R+++ + R KI V R+ K + Sbjct: 1 MPELPEAEVAARQLRERVVGATVRDCWIGREDIVREGLLSLEQ-YRQAKITGVERKGKSV 59 Query: 61 LIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ ++ LGM+G + TS K+P H H + L + + Y Sbjct: 60 ILHFLCGKEPRFLVAELGMTGLLLFRSTS----TKHPHHTHFVLHLDGCSEPD---IRYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 +PRRFG + L++ + +Y R G +P S S LK+ L++Q+++ Sbjct: 113 NPRRFGRLSLLDQAGLERYVA-RRFGYDPLTISHEQFLCV--LRATRSRLKSLLMHQQVI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ L P + + N P+ + +L Q + +VL +AI GGSS+R Sbjct: 170 AGIGNIYANEILFRSCLHPNQPS------NTIPEKSIVRLHQVMGEVLREAIAMGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY DG+ G +++ VY K GEPC + CG +I R V RS+FYC CQ+ Sbjct: 224 DYFAPDGTEGQYKSRHLVYAKAGEPCPNACGTVICRSV-GERSSFYCPTCQR 274 >gi|70726236|ref|YP_253150.1| hypothetical protein SH1235 [Staphylococcus haemolyticus JCSC1435] gi|68446960|dbj|BAE04544.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 290 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 153/309 (49%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N T+ + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYILNATIKSVTFSNKVIEGKQQGKETIIKGINLD---GFRLNSE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS 102 KI + RR+KY++ +E N + I+ HLGM+G F I++ S +H HV Sbjct: 58 SFKIKSIDRRSKYIVFTIEKNNNQRIILSHLGMAGGFFIVDKLSDISTPNYRKHWHVVFH 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L N +++Y+D RRFG +L + YP + PEP D++ +L K Sbjct: 118 LDNGK-----QLVYSDIRRFG--ELRNLATYNDYPAFLEIAPEPFDDNALNYFLDRIKLK 170 Query: 163 KNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K N +K LL+ K++AG GNIY CEAL+RA + P RK + + + + +L+ +QE Sbjct: 171 KYQNKPIKQMLLDHKMIAGCGNIYACEALFRAGVLPERKVKDV---SNQERQMLFYYVQE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 VL + I+ GG+S+ DY H DG G Q +VY + CG I + V A R+ Sbjct: 228 ---VLNEGINNGGTSISDYRHADGKTGEMQLHLNVY---KQKTCKICGHDIEQKVIASRN 281 Query: 281 TFYCTYCQK 289 + +C +CQK Sbjct: 282 SHFCPHCQK 290 >gi|270308552|ref|YP_003330610.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] gi|270154444|gb|ACZ62282.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] Length = 270 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ +M + +T I L K L F+ G ++ ++SRR KY Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRIEALWAKTL-CPPETEFNKLVSGLQVTELSRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I L G L I VHL MSG +P P+ L N +V + D Sbjct: 60 IIISLSGGLFISVHLKMSGGLTAVKAENGQP---PRFTRAVFHLENGE-----QVYFTDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG ++L+ TSL L LGPEP + F L+ + ++ +K LL+Q+++AG Sbjct: 112 RKFGRINLL-TSLDTI---LEKLGPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E L++A L+P+R SL K + L I+ VL AI G+S+ Y Sbjct: 168 VGNMYADETLFKACLNPLRPADSL------SKAEVINLHSAIRSVLYKAIQNKGASVSTY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ ++C +CQ Sbjct: 222 HRPDGSKGGAQLEFNVAHRRGESC-PICGAPITRQLIRQRACYFCPHCQ 269 >gi|256824934|ref|YP_003148894.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688327|gb|ACV06129.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 297 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 147/302 (48%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATR-GKKIIDVSRRA 57 MPELPEVE++R L +V + + V D+ R R + A G+++ RR Sbjct: 1 MPELPEVEVVRAGLESHVVGRTIEVADVRGDRVARRHEGGAAALARALTGRRLCSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVI 115 K+L + L+ +++ HLGMSG ++ P + P +H H + + T ++ Sbjct: 61 KFLWLPLDDGHALMTHLGMSGQMLV------LPAEEPPVRHEHARLDFEDEGPTLRF--- 111 Query: 116 YNDPRRFGFMD---LVETSLKYQYP---PLRT--LGPEPADNSFNAIYLTHQFHKKNSNL 167 D R FG LV +P P + P+P + F+A + + + + Sbjct: 112 -ADQRTFGGWSVDPLVPDPHGGDHPGGVPATATHIAPDPFETCFDAGAVAARLRTRRGPV 170 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K A+L+Q +V+G+GNIY EALWR + R SL L+ +Q V+ + Sbjct: 171 KRAILDQGLVSGVGNIYADEALWRTGVHGERPGHSLTGPR------ARALLTHLQAVMGE 224 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ GG+S YV+++G+ GYF +VYG+ G PC + CG + R GRS+ +C Sbjct: 225 ALEQGGTSFDALYVNVNGASGYFDRRLAVYGQQGRPCPA-CGSTVLRSPFDGRSSHWCPT 283 Query: 287 CQ 288 CQ Sbjct: 284 CQ 285 >gi|72161056|ref|YP_288713.1| formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] gi|90101321|sp|Q47S77|FPG_THEFY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71914788|gb|AAZ54690.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] Length = 296 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + ++ LH + +R P F+A G + + RR Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN---TKKYRV 114 KYL + L+ +++ HLGMSG +++ A +H V + LT + Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAE----RHLRVRLPLTARQGHDPEAPQEL 116 Query: 115 IYNDPRRFGFM---DLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG + LV+ P + + + +P D +F+ +K + LK A Sbjct: 117 RFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTELKRA 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++GIGNIY EALW ++L T +L ++ + L+ +++V++ A+ Sbjct: 177 LLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQ------VATLLAAVREVMVAALA 230 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + + YG+ +PC + CG I+R RS++ C CQ Sbjct: 231 QGGTSFDSLYVNVNGESGYFARSLNAYGRNDQPC-ARCGTPIQRETFMNRSSYSCPRCQ 288 >gi|33567483|emb|CAE31396.1| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] Length = 243 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 130/262 (49%), Gaps = 25/262 (9%) Query: 33 LRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF--IIEHTSCAKP 90 +R+ P G+ +++ RR KYLL+ + + I VHLGMSGS + E + K Sbjct: 1 MRWPIPPALPDLLAGRTVLECGRRGKYLLLRFDHGVQI-VHLGMSGSLRRVPEQEAPRK- 58 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG--FMDLVETSLKYQYPPLRTLGPEPAD 148 H+HV + + +DPRRFG E +P L LG EP D Sbjct: 59 -----HDHVDWVFDHAV------LRLHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFD 107 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 F+ +L F + +K ALL V G+GNIY E+L+RA + P R+ Q Sbjct: 108 PRFDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESLFRAGIDP----RTAAQRVS 163 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNC 267 + +L I+ L DA+D+GGS+LRDYV G G YF +VY + G PC C Sbjct: 164 AAR--CDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAAVYERAGLPC-RVC 220 Query: 268 GQMIRRIVQAGRSTFYCTYCQK 289 G IRR+VQ R+T++C CQK Sbjct: 221 GTPIRRLVQGQRATYFCPSCQK 242 >gi|77359412|ref|YP_338987.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] gi|76874323|emb|CAI85544.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] Length = 258 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 136/275 (49%), Gaps = 30/275 (10%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 N VT + +H ++R+ P T G + V RRAKYLL+ S I+HLGMSG+ Sbjct: 9 NQVVTKVNIHNGSMRWPVPDDVYQLT-GLTVTGVERRAKYLLLHCALG-STILHLGMSGN 66 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP- 138 + S +P+K +H+H+ N K R+ NDPRRFG +Q P Sbjct: 67 LRV--VSANEPLK--KHDHIEFIFANG---KALRL--NDPRRFG-------CCLWQAPGS 110 Query: 139 ----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 L LGPEP + F A + Q K +K ++N IV G+GNIY E+L++A + Sbjct: 111 VHKLLAKLGPEPLTDEFFAKQVYQQSRNKKVPVKQFIMNNAIVVGVGNIYANESLFKAGI 170 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P R+ + + LI I+ L AI GG++L+D+ DG GYF Sbjct: 171 DPRREAGKVSLKS------FEALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQLL 224 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PCL C ++ + RST +C CQK Sbjct: 225 VYGRKGQPCLV-CKSELQEVRLGQRSTVFCGKCQK 258 >gi|151337011|gb|ABS00947.1| MutM [Thermus aquaticus] Length = 200 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 112/222 (50%), Gaps = 24/222 (10%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++VHLGM+G F +E T H L + + ++DPRRFG + +VE Sbjct: 1 MVVHLGMTGGFRLEKTP---------HTRAEFLLEDGV------LHFHDPRRFGRIWVVE 45 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L LGPEP F + LK LL+Q + AG+GNIY EAL Sbjct: 46 RGAYGEIPLLARLGPEPLSPEFRPEAFLLGLRRSRKPLKALLLDQTLAAGVGNIYADEAL 105 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD--YVHIDGSIG 247 +RA LSP R R + + +L Q +++VL +A+ GGS+L D Y DG G Sbjct: 106 FRAGLSPFRLGREVSEEEA------LRLFQALREVLAEAVALGGSTLSDRTYQQPDGLPG 159 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQ +VYG+TG PC CG I + V AGR T YC CQ+ Sbjct: 160 GFQKRHAVYGRTGLPC-PRCGAPIAKGVVAGRGTHYCPRCQR 200 >gi|329768945|ref|ZP_08260371.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] gi|328836167|gb|EGF85849.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] Length = 286 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 143/302 (47%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----------LHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L +KN + + L++ + FS GKKI Sbjct: 1 MPELPEVENIKLGLEDSLKNKKILSVTFSNTVKEGHDLNKMPIVKQSLIDFSNNVVGKKI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNT 109 ++SRR KYL + L II H GM+G+F + + KN +H HV L N Sbjct: 61 KELSRRGKYLYLALNKGY-IITHFGMTGAFFLVNDIAEITNKNYYKHRHVIFELDTNE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK--NSNL 167 +++++D RRFG + VE +++ P L PEP + +L KK + ++ Sbjct: 118 ---KLVFSDIRRFGELRYVEKIGEFK--PFVNLAPEPFEKKAKQYFLDKLLEKKYKDQSI 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+ + G GNIY CE L+R ++ P+ K L L E+ +L Sbjct: 173 KALLLDGNVFCGCGNIYDCEVLYRKRIHPLTKPCELTLKEKED------LFDELVFILEW 226 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI GGS++ DYVH DG G QN +YGK P G + I GRS+ YC C Sbjct: 227 AIKEGGSTISDYVHADGGEGNMQNFHQIYGKKKCP----LGHDVENINIKGRSSHYCPVC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|257055002|ref|YP_003132834.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256584874|gb|ACU96007.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 287 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 136/295 (46%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + V+ + LH + +R F G KI V RR Sbjct: 1 MPELPEVEVVRAGLEKHVLGRIVSSVEVLHPRAIRRHVLGEADFVGRLVGAKITAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL EL +++ HLGMSG +I+ P H+ + + + + R + Sbjct: 61 KYLWFELADGTAVLAHLGMSGQMLIQ------PRGVVDEKHLRVRFRFSDDGPELRFV-- 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLVE + + +P D F+ + + + +K ALL+Q Sbjct: 113 DQRTFGGLSLTDLVEVEGTVLPSAIAHIARDPLDPLFDVVATARALRTRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR L R L + +L + + + L GG+ Sbjct: 173 TLVSGIGNIYADEALWRVGLHWARPADRLTATQA--RGVLAAAAEMMVEAL----RVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG +I R RS+F C CQ Sbjct: 227 SFDALYVNVNGESGYFSRSLDAYGREGEPC-RRCGSLIVREAFTNRSSFSCPRCQ 280 >gi|266618595|pdb|3GPX|A Chain A, Sequence-Matched Mutm Interrogation Complex 4 (Ic4) gi|266618601|pdb|3GQ3|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec5-Loop Deletion Complex Length = 257 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 37/291 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 PELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGG----- 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 219 -----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] Length = 281 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 154/303 (50%), Gaps = 36/303 (11%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE I R L +V + + D+ L R DF +A G+ I V Sbjct: 1 MPELPEVETIARALAPGLVGRVIVGVDVPDAKVLAGPKRRADF----AAMAVGRTIQSVG 56 Query: 55 RRAKYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 RRAK LL+ L +G + HL M+G F I +P + + L++ Sbjct: 57 RRAKLLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIAPPGA----PDPDRARLLVRLSDG 112 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 NT +++ D RRFG ++ + +LGPEP D + A +K++ Sbjct: 113 -NT----LVFADLRRFGTARVLTPEALSAWDFHASLGPEPWDMTPQA--FEEALGRKSTR 165 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+Q ++AGIGNIY E+L+ A++ P + L TP +L++ +Q V+ Sbjct: 166 IKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKDL-----TPAQ-RQRLLKAVQNVIA 219 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI AGGS++RDY DG G FQN F VYGK+G+PC + C + AGR++ YC Sbjct: 220 AAIAAGGSTIRDYRTPDGVEGGFQNHFQVYGKSGDPCPA-CAAPLTHAKIAGRTSTYCRK 278 Query: 287 CQK 289 CQK Sbjct: 279 CQK 281 >gi|19553271|ref|NP_601273.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|161486717|ref|YP_226310.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|24211704|sp|Q8NNV7|FPG_CORGL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21324843|dbj|BAB99466.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 286 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 147/306 (48%), Gaps = 39/306 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT-VTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T V+ LH + R A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L +EL +L ++VHLGMSG +I+ PI H + L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDA--PIS--PHLRAKVELDNGDE- 115 Query: 110 KKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRT--LGPEPADNSFNAIYLTHQFHKKN 164 V + D R FG+ DLV+ P R + + D S + + + Sbjct: 116 ----VWFVDQRTFGYWWLGDLVDGV------PERVSHIATDVLDESADFSAIARNLKSRK 165 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V Sbjct: 166 SEIKRLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDV 219 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A+ GG+S YV+++G+ GYF + + Y +TGEPC CG +I R R + Y Sbjct: 220 MTKALAQGGTSFDALYVNVNGNSGYFALSLNAYAQTGEPC-GRCGTLIIRESFMNRGSHY 278 Query: 284 CTYCQK 289 C CQK Sbjct: 279 CPNCQK 284 >gi|16330976|ref|NP_441704.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] gi|2494596|sp|P74290|FPG_SYNY3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1653470|dbj|BAA18384.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] Length = 287 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 143/302 (47%), Gaps = 34/302 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFP---HHFSAATRGKKIIDVSR 55 MPELPEVE + R L + T+ ++ L R +P F G +++ R Sbjct: 1 MPELPEVETVCRGLNRLTLEQTIGGGEVLLDRS---LAYPVSVEDFQKQITGCRLVGWQR 57 Query: 56 RAKYLLIELEGNLS------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 R KYLL EL N + + HL M+G + + + P+H V + Sbjct: 58 RGKYLLGELRSNQAPGPAGWLGCHLRMTGQLLWTE----RDQQRPRHTRVVLHFEGG--- 110 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + + D R FG + L+ + L LGPEP F A YL + L Sbjct: 111 --WELRFVDTRTFGKVWLLPGDRPWAEVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRPL 168 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVLI 226 KNALL+Q++VAG+GNIY E L+ P ++ N + +D +LI Q+IQ L Sbjct: 169 KNALLDQRLVAGLGNIYADEVLFFCGFHP-----TMASNQVSLQDC--ELIHQQIQATLT 221 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI+AGG+S DY + G G + VYG+ GEPC +CG +I +I GRS +C Sbjct: 222 AAIEAGGTSFSDYRQVTGINGNYGGMAQVYGREGEPC-RHCGTVIAKIKLGGRSAHFCPQ 280 Query: 287 CQ 288 CQ Sbjct: 281 CQ 282 >gi|111225161|ref|YP_715955.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111152693|emb|CAJ64434.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Frankia alni ACN14a] Length = 321 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 154/330 (46%), Gaps = 57/330 (17%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +V + + +C R R F+A G+++ RR Sbjct: 1 MPELPEVEVVRRGLQRGVVGRVIASVAVCHPRAVRRHPAGAGDFAALLVGQRVTAARRRG 60 Query: 58 KYLLIEL---------------------EG----------------NLSIIVHLGMSGSF 80 KYL + L EG + ++I HLGMSG Sbjct: 61 KYLWLALRTDLAAAVAAAAPALAIEPGTEGAPAGLPVLESPPSAAPDDALIAHLGMSGQL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 ++ P P H+ I T ++ R + D R FG + + + P + Sbjct: 121 LV------VPPTTPDQRHLRIRFTFVDGGRELRFV--DQRTFGGLAVAVGGGELPEP-VA 171 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + +P D +F+ + + + + +K ALL+Q +V+G+GNIY EALW A++ T Sbjct: 172 HIARDPLDPAFDEDLVVRRLRDRRTGVKRALLDQTLVSGVGNIYADEALWAARMHYAHPT 231 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKT 259 +L + + +L+ ++ V+I A+DAGG+S R YV DG G F+ + +VYG+ Sbjct: 232 ETLTRPE------VRRLLDCVRTVMIAALDAGGTSFDRLYVSTDGVSGLFERSLAVYGRA 285 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+PC CG IRR RS+F C CQ+ Sbjct: 286 GQPC-GRCGDTIRRDAFMNRSSFTCPTCQR 314 >gi|325963728|ref|YP_004241634.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469815|gb|ADX73500.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 321 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/324 (29%), Positives = 158/324 (48%), Gaps = 47/324 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+ + L +++R F+ G + D+ RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIEAVEVLDPRSIRRHALGAEDFTGNLEGATVADIVRRG 60 Query: 58 KYLLIEL-------EGNLSI-------IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 K+L + L EG SI + HLGMSG +++ + + + +H V L Sbjct: 61 KFLWMPLVHPAAAAEGQGSIGRPEVALMAHLGMSGQLLMQD----RGVPDEKHLKVRFRL 116 Query: 104 TNNTNTKKYRVIYNDPRRFGFM--------------DLVETSLKYQYPPLRTLGPEPADN 149 + + ++ + D R FG + L E+ L + +P D Sbjct: 117 SPREGMPE-QLRFVDQRIFGGLFVTSLVPTDDGGPGGLAESQLPLIAEEASHIARDPLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 +F+ + K+ + LK ALL+Q +V+GIGNIY EALWRA+L R T +L ++ Sbjct: 176 AFSFELFYRRLRKRKTGLKRALLDQGLVSGIGNIYADEALWRARLHFARPTDTLRRSEAE 235 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC----L 264 +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ G+PC Sbjct: 236 ------RVVDSAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGREGQPCKRCAA 289 Query: 265 SNCGQMIRRIVQAGRSTFYCTYCQ 288 + IRR RS+ C CQ Sbjct: 290 AGIHATIRRDQFMNRSSHTCPVCQ 313 >gi|283457875|ref|YP_003362475.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133890|dbj|BAI64655.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 359 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 109/363 (30%), Positives = 168/363 (46%), Gaps = 87/363 (23%) Query: 1 MPELPEVEIIR-----RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R +L ++ + V D R++L P HF A G+ + R Sbjct: 5 MPELPEVETVRAGIADHSLGRPVRAVRVVDARSLRRHL--PGPAHFETALTGRALRGAYR 62 Query: 56 RAKYL---LIELEGNLS---IIVHLGMSGSFII------------------EHTSCAKPI 91 R KYL L E +G L+ ++VHLGMSG ++ E + A Sbjct: 63 RGKYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGGDSGSESGSDSGNESEARAAFD 122 Query: 92 KNPQHNHVTISL-----------------TNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 + P+H V + L N NT + R+++ D R FG M L + L Sbjct: 123 EQPRHLRVALELGPVGATSVAGATGGAASANRANTGQ-RLLFVDQRIFGGMFL--SPLVP 179 Query: 135 QYP-------------PLRTLGPE--------PADNSFNAIYLTHQFHKKNSNLKNALLN 173 P P R L PE P D F+ + +F + +S +K LL+ Sbjct: 180 DVPAAVATNKVAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLD 239 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L + R+L +L++ + +VL +++ AGG Sbjct: 240 QSVISGVGNIYADEALWRARLHYAKPARTLSAAQ------TRELLEAVTQVLRESLAAGG 293 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ------MIRRIVQAGRSTFYCTY 286 +S YV++ G GYF+ + + YG+ GEPC C + M+R Q RS++ C + Sbjct: 294 TSFDALYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQ-NRSSYRCPH 351 Query: 287 CQK 289 CQ+ Sbjct: 352 CQR 354 >gi|81300132|ref|YP_400340.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] gi|60416387|sp|Q08079|FPG_SYNP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81169013|gb|ABB57353.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] Length = 282 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 146/300 (48%), Gaps = 33/300 (11%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ + L + + P F A + +I + RR KY Sbjct: 1 MPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQQTQIQEWRRRGKY 60 Query: 60 LLIEL--EGNLSII--VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LL +L EG + VHL M+G F T A P+ +H V + + ++ R I Sbjct: 61 LLADLSREGEPAGTWGVHLRMTGQFF--WTEPATPLT--KHTRVRLRFEGD---RELRFI 113 Query: 116 YNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG M V + ++ L LGPEP F A YL + + +K ALL+ Sbjct: 114 --DIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-----IQKVLIDA 228 Q +VAGIGNIY E+L+R + P TP D L K+ E I +VL + Sbjct: 172 QSLVAGIGNIYADESLFRTGIHPT-----------TPSDRLTKIQAEKLREAIVEVLTAS 220 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I AGG++ D+ + G G + VYG+ +PC CG I+++ AGRS+ +C CQ Sbjct: 221 IGAGGTTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLAGRSSHFCPRCQ 279 >gi|85057347|ref|YP_456263.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789452|gb|ABC65184.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] Length = 276 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 145/298 (48%), Gaps = 40/298 (13%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEV+II L ++ K + T + KN + +F I+D+ R+ Sbjct: 1 MPELPEVQIIVDFLKTQLIGKKIVATKVFYEPTVKNTK-EF-----QKIEQTTILDIQRK 54 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVTISLTNNTNTKKYRV 114 K+LL L L +I HL M G I KP P+H H +I L + ++ + Sbjct: 55 GKFLLFFLTQELVLIGHLRMEGKLFI------KPCDEPKHKYEHFSIILGDKSSLR---- 104 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 Y D R+FG ++ ++ L L +P + N ++L + K S LK LLNQ Sbjct: 105 -YYDFRKFGRFEVKNQNIFLTQTTLHQLALDPFE--INPVFLYQKILKTKSALKKVLLNQ 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI----QKVLIDAID 230 KI++G+GNIYV E L+ KL P K L K +QEI QKVL AI Sbjct: 162 KIISGLGNIYVNEVLFLVKLHPETKACELS----------LKQVQEIVTISQKVLAKAIK 211 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+++ + G IGYFQN V+GK +PC+ NC I +I GR T+ C CQ Sbjct: 212 LGGTTVSTFESQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPICQ 268 >gi|296139285|ref|YP_003646528.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] gi|296027419|gb|ADG78189.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] Length = 286 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFS--AATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + LH + R G ++ RR Sbjct: 1 MPELPEVEVVRRGLADHLVGRTVTAVEVLHPRAARRHVAGDADLIGQVTGAQVTSAERRG 60 Query: 58 KYLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + L + +I+VHLGMSG ++ + +H + L + + Sbjct: 61 KFLWLPLARAGRPADAAIVVHLGMSGQMLVGP-------GDDRHLRIRAGLDDGAVLR-- 111 Query: 113 RVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D R FG LVE + + +P D F+ + + K++ +K Sbjct: 112 ---FVDQRTFGGWAVDPLVEVDGTLVPESVAHIARDPLDARFDRAAVIARMKAKDTEVKR 168 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +++G+GNIY EALW +++ R+ +L K L +L+ + +V+ A+ Sbjct: 169 VLLDQTVISGVGNIYADEALWLSRVHGRRRASALT------KPALGRLVDDATEVMRKAL 222 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D GG+S YV+++G GYF+ + + YG+ GEPC CG ++RR R + +C CQ Sbjct: 223 DQGGTSFDSLYVNVNGQSGYFERSLNAYGRDGEPC-RRCGTIMRREQFMNRGSHFCPTCQ 281 >gi|282854596|ref|ZP_06263931.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|282582178|gb|EFB87560.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|314966092|gb|EFT10191.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA2] gi|314981863|gb|EFT25956.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA3] gi|315090789|gb|EFT62765.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA4] gi|315094942|gb|EFT66918.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL060PA1] gi|315104263|gb|EFT76239.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA2] gi|327328031|gb|EGE69800.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 280 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRV------SPQHAPQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 224 SFDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 295 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 151/310 (48%), Gaps = 39/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+++L+ + ++ + ++ + + P F + +I DV RR KY Sbjct: 1 MPELPEVETIKKSLLSDLTGDRISRVEIYFPGMLQNMSPEDFKESVISNQIKDVKRRGKY 60 Query: 60 LLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 LLI + N II+HL M+G I+++ K HNH L + ++Y Sbjct: 61 LLIYVSCNGKMKDQVKVIIIHLRMTGRLILKNNEVEKS-----HNH----LDDEEIIQEY 111 Query: 113 RVI-------------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 R + ++D R+FG M LV ++ + L LGPEP F+ Sbjct: 112 RHLRCLFQLQSGITLEFHDQRKFGTMALVNQGEEFYWKGLANLGPEPLSEEFDYEDFYKG 171 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI-QNNGTPKDILYKLI 218 K +K LL+QK+VAGIGNIY E L+ + + P RK L Q G+ LYK I Sbjct: 172 VKKSKKPIKGILLDQKLVAGIGNIYADEVLFASGIHPARKGEELTEQEVGS----LYKTI 227 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 +I ++ I G++ DY +G+ G FQ+ V+ + E CL C + +++ A Sbjct: 228 IQILEL---GIKYRGTTFSDYRDSEGNKGNFQDLLKVFNRNKEECLI-CRREVQKTKVAN 283 Query: 279 RSTFYCTYCQ 288 R T+YC CQ Sbjct: 284 RGTYYCPNCQ 293 >gi|213855126|ref|ZP_03383366.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 250 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 139/273 (50%), Gaps = 23/273 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 DG GYF + G S G +RR Sbjct: 222 QSDGKPGYFARSCRCTGAKA----SRVGYAVRR 250 >gi|73662385|ref|YP_301166.1| formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494900|dbj|BAE18221.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 294 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 153/312 (49%), Gaps = 45/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----------HR----KNLRFDFPHHFSAATR 46 MPELPEVE + R + +K + I HR K + D F TR Sbjct: 1 MPELPEVEHVTRGIKPFVKGQKIESILFSDKVQEGKANHRETIVKGMELD---TFKRFTR 57 Query: 47 GKKIIDVSRRAKYLLIELE--GNLSIIV-HLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 I+D+ RR+KY++ LE G+ I++ HLGM+G F + + I P +H HV Sbjct: 58 LYTIVDIERRSKYIVFYLEKDGDKRILISHLGMAGGFFV--VDKLEDISVPNYRKHWHVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L N+ ++Y+D RRFG ++ + YP + PEP + A YL F Sbjct: 116 FKLDNDK-----LLVYSDIRRFG--EIRNVASFEAYPSFLEIAPEPFEKEAMAHYLA-WF 167 Query: 161 HKK---NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 KK N +K +L+ ++++G GNIY CEAL+R+ + P R + L N +++L+ Sbjct: 168 DKKLYQNKPIKQMILDHRVISGCGNIYACEALFRSGIHPARLPKDL---NHQEREMLFYY 224 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 ++E VL I GG+S+ DY H DGS G Q +VY + CG I V A Sbjct: 225 VRE---VLEAGIKYGGTSISDYRHADGSTGTMQQHLNVY---KQKVCKVCGDDIATQVIA 278 Query: 278 GRSTFYCTYCQK 289 R++ +C CQK Sbjct: 279 TRNSHFCPTCQK 290 >gi|254412410|ref|ZP_05026184.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] gi|196180720|gb|EDX75710.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] Length = 282 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/309 (33%), Positives = 152/309 (49%), Gaps = 49/309 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKK---IIDVSR 55 MPELPEVE IR L + + D+ L R +P +A +G K I D R Sbjct: 1 MPELPEVETIRLGLKQITCTQAIQGGDVLLPRT---IAYPVSVAAFWQGLKQTRITDWHR 57 Query: 56 RAKYLLIEL----EGNLSII-VHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNT 109 R KYLL +L EG+ + VHL MSG + I+ T +P++ +H V + Sbjct: 58 RGKYLLAQLNRSEEGDAGWLGVHLRMSGQLLWIQQT---EPLQ--KHTRVRLFFPQGQEL 112 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQ 159 + + D R FG M + PP L+ LGPEP ++F+ YLT + Sbjct: 113 R-----FVDQRTFGRM--------WWVPPGEECDSIITGLQNLGPEPFSDAFSPEYLTQK 159 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K ++K A+L+Q +VAG+GNIY EAL+ + + P L D + +L Q Sbjct: 160 LKKSQRSIKTAILDQSLVAGVGNIYADEALFVSGIHPQTVCARL------SVDQVERLHQ 213 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I +VL I+AGG++ ++++ G G + VYG+TG+PC C I RI +GR Sbjct: 214 GIIQVLKAGIEAGGTTFSSFLNVQGVNGNYSGVAWVYGRTGQPC-RVCETSIERIKLSGR 272 Query: 280 STFYCTYCQ 288 S+ +C CQ Sbjct: 273 SSHFCPRCQ 281 >gi|289705862|ref|ZP_06502242.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] gi|289557405|gb|EFD50716.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] Length = 305 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/275 (30%), Positives = 148/275 (53%), Gaps = 24/275 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAAT---RGKKIIDVSRR 56 MPELPE E++RR L + ++ L ++LR P A RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRS-PGGADALRERLRGARLAEPARR 59 Query: 57 AKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L + L EG+ +++VHLGMSG +++ A + +H + + +T + + + Sbjct: 60 GKFLWLPLAEGDDAVVVHLGMSGQILVDEPGAA----DQRHLRLRLPVTAADGSAR-ELR 114 Query: 116 YNDPRRFG--FMDLV---ETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D R FG ++D + + + + P + +P F+ + + + ++ S LK Sbjct: 115 FVDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPVAVHARLARRRSTLKR 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A+ Sbjct: 175 ALLDQSLVSGIGNIYADEALWGARLHPERPTERMRRAD------TLRLMAAVQDVMRRAL 228 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 + GG+S YV++DG GYF + + YG+TG+PC Sbjct: 229 EVGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPC 263 >gi|298492017|ref|YP_003722194.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] gi|298233935|gb|ADI65071.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] Length = 278 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 144/294 (48%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T DI L R + F +G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNEGITGGDILLKRTVAYPFYVSEFIDNLKGSSIKSWHRRGK 60 Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL EL + + + VHL M+G + + + P H H + L +K + + Sbjct: 61 YLLAELTPSSTCLGVHLRMTGQLLWLNQN------EPLHKHTRVRLFFG---EKQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + + L L +P F YL ++ K +K ALL+Q Sbjct: 112 DQRTFGQMWYVPPGVPVESIIRGLAQLAVDPFSPEFTVEYLANKLQKGRRPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P L + P L I KVL +I AGG++ Sbjct: 172 IVAGLGNIYADEALFKSGILPTTLCTDLQKKQVEP------LRTAIIKVLSASIAAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++++ G G + VY +TG+PC CG +I+RI GRS+ +C+ CQK Sbjct: 226 FSNFLNVKGINGNYGGEAWVYKRTGKPC-KVCGNVIQRIKLGGRSSHFCSQCQK 278 >gi|71893928|ref|YP_279374.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae J] gi|71852055|gb|AAZ44663.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae J] Length = 275 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 146/297 (49%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIRRNLMMV-----MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEV + L +KN+ D ++ FDF AT IID+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNAT----IIDIQN 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ---HNHVTISLTNNTNTKKY 112 RAK++LI L+ I+ HL M+G + K+PQ +++++ ++N+ Sbjct: 57 RAKHILIFLDNRKVILSHLRMNGKYF--------TYKSPQWGKYDYISFVFSDNSVLN-- 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 YND R+FG + + L ++ PL+ L PEP + Y + K ++K LL Sbjct: 107 ---YNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDDFY--QKIRKSTRSIKAILL 161 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QKI++G+GNIY E + K+ P KT LI I + +K+L +I G Sbjct: 162 DQKIISGLGNIYADEVCFATKIFP-GKTAKLISRKEAELIIYFS-----KKILQQSIKLG 215 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+ Y ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 216 GSSISSYTSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|255326577|ref|ZP_05367654.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296317|gb|EET75657.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 360 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 106/366 (28%), Positives = 165/366 (45%), Gaps = 88/366 (24%) Query: 1 MPELPEVEIIR-----RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R +L +++ + V D R++L P HF A G+ + R Sbjct: 1 MPELPEVETVRAGIADHSLGRLVQAVRVVDARSLRRHL--PGPAHFEVALTGRALRGAYR 58 Query: 56 RAKYL---LIELEGNL---SIIVHLGMSGSFIIEHTSCAKPI------------------ 91 R KYL L E +G L +++VHLGMSG ++ +P Sbjct: 59 RGKYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGDEPGGDSGSDSGSESEARAAFD 118 Query: 92 KNPQHNHVTISL-----------------TNNTNTKKYRVIYNDPRRFGFMDL------- 127 + P+H V + L TN T + R+++ D R FG M L Sbjct: 119 EQPRHLRVALELGPVGATSAAGATGGTVSTNRAGTGQ-RLLFVDQRIFGGMFLSRLVPDV 177 Query: 128 ---------VETSLKYQYPPLRTLGPE--------PADNSFNAIYLTHQFHKKNSNLKNA 170 P R L PE P D F+ + +F + +S +K Sbjct: 178 PAAVAVNEAAAGEAAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKV 237 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++G+GNIY EALWRA+L + R+L +L++ + +VL +++ Sbjct: 238 LLDQSVISGVGNIYADEALWRARLHYAKPARTLSAAQ------TRELLEAVTQVLRESLA 291 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ------MIRRIVQAGRSTFY 283 AGG+S YV++ G GYF+ + + YG+ GEPC C + M+R Q RS++ Sbjct: 292 AGGTSFDALYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQ-NRSSYR 349 Query: 284 CTYCQK 289 C +CQ+ Sbjct: 350 CPHCQR 355 >gi|239817308|ref|YP_002946218.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] gi|259647152|sp|C5CYZ1|FPG_VARPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|239803885|gb|ACS20952.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] Length = 270 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 149/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + K LR+ A G++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGFAERIAGARIDAVRIG-KPLRWAL-MVMPEALVGRRVLQVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ MSGS + A + H+H L T + NDPR Sbjct: 59 LIDLDRGLLLLHLG-MSGSLRFDAALPAPGV----HDH--FDLVTELGTLRL----NDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + VE + + L LG EP ++F+ K+ + +K LL +V G Sbjct: 108 RFGAVVYVEDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKAAVKQVLLAGDVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ L+ IR T S + + L+ ++EI L A++ GGS+LRD+ Sbjct: 168 VGNIYASEALF---LAGIRPTLSAARISRPRAARLHAAVREI---LARAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++G GYFQ +VYG+ GEPC C IR + Q RST+YC CQK Sbjct: 222 SNVEGQSGYFQLEATVYGRAGEPC-RVCATPIRLLRQGQRSTYYCPNCQK 270 >gi|314923851|gb|EFS87682.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL001PA1] Length = 280 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRV------SPQHAPQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVIHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 224 SFDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|86156705|ref|YP_463490.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773216|gb|ABC80053.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 280 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARAVEGARFAGIRRIG 60 Query: 58 KYLLIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ + P P+H + L + + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLR--AAGDPA--PRHARAWLRLEGDGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + + P + LGP+P ++ + L LK LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFDEVPEVAALGPDPLEDGIDPAALAGALAASRLPLKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA+L P R +R+L + L I ++ +DA D G Sbjct: 172 RLLPGVGNIHASEACYRARLDPRRPSRTLSRAGAK---ALAAGILASFRMTLDAED--GP 226 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 + YV G+ +N F VY + GEPC C + IRRIVQA RSTF+C CQ+ Sbjct: 227 EI-TYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPIRRIVQAQRSTFFCPRCQR 280 >gi|308177248|ref|YP_003916654.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307744711|emb|CBT75683.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 307 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 157/314 (50%), Gaps = 39/314 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ TV + L +++R D F G I V RR Sbjct: 1 MPELPEVEVVREGLDKWIRARTVQSVQVLDPRSVRRHIDGVDDFEQTLTGCTITSVVRRG 60 Query: 58 KYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+L ++LEG +++ HLGMSG ++E P H+ + L+ + + R Sbjct: 61 KFLWMDLEGLETPTALVAHLGMSGQLLVEEPDA------PDEKHLKVRLSLSQKSVFPRE 114 Query: 115 I-YNDPRRFGFM---DLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQ--------F 160 + + D R FG M LV T+ L +R PE A + + H+ Sbjct: 115 LRFVDQRIFGGMFLSPLVATADALPAGAGSIRATIPEAAAHIARDVMDPHRAPEDLYVSL 174 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ + LK A+L+Q I++G+GNIY EALW+A LS +R T ++ + + +L Sbjct: 175 RRRTTQLKRAILDQGIISGVGNIYADEALWQAGLSGLRNTATIRRPE------VDRLNDA 228 Query: 221 IQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRI 274 + V+ A+ AGG+S YV+++G+ GYF + + YG+ G+ C + C +IRR Sbjct: 229 LVDVMTRALAAGGTSFDSLYVNVNGASGYFARSLNAYGREGKAC-ARCLENGRDSLIRRD 287 Query: 275 VQAGRSTFYCTYCQ 288 GRS++ C CQ Sbjct: 288 PFMGRSSYSCPVCQ 301 >gi|281307047|pdb|3GO8|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-Loop Deletion Complex Length = 257 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 37/291 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 PELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG+ Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGN---- 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 220 ------------HHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|206603467|gb|EDZ39947.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum sp. Group II '5-way CG'] Length = 291 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 42/302 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--------CLHRKNLRFDFPHHFSAATRGKKIID 52 MPELPE E IR ++ + V I + R + F+ GK +I Sbjct: 1 MPELPEAEAIRLPVIRFFSDGIVESIKRGNNKKIWIGENEYRLEELFLFTVRRTGKVLI- 59 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + + + + + +I LGMSG+++I+H P+ P H H+ IS ++ + Sbjct: 60 ----FDWRITKEKPAVLLISRLGMSGTWLIQHLR--DPL--PDHCHLVISFKDSA----H 107 Query: 113 RVIYNDPRRFG-----FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 R++Y DPRRFG F + L Q P + + PAD+ + + + + + Sbjct: 108 RLVYRDPRRFGRLEWAFEEECSVILASQGPDILKI---PADDWYR------EARRSSRTI 158 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 ++ LL+QKI +GIGNIY E L+ A LSP R +SL + Y+++ +++L Sbjct: 159 RSLLLDQKISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAARQILES 212 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI +GGS++ + G G +Q+ +VYG+ G+PCL C I+ + +A R+ FYC C Sbjct: 213 AIRSGGSTIHSFQTSLGENGRYQDRHTVYGRAGKPCL-QCSTPIQSVREASRTLFYCPVC 271 Query: 288 QK 289 QK Sbjct: 272 QK 273 >gi|167754595|ref|ZP_02426722.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|237733769|ref|ZP_04564250.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|167705427|gb|EDS20006.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|229383107|gb|EEO33198.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 270 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + N+ D F A + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKKIISIDVLYPNIIEDDVEEFIEACTNQTINDIDRAGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +L+ +++ + HL M G + +EH +P+ +H+H+ +L +N + YND Sbjct: 61 IFKLD-DIAFVSHLRMEGKYHYVEHD---EPLN--KHDHIIFNLDDNKQLR-----YNDT 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV PL LGPEP + IY + HK N +K+A+L+Q I+AG Sbjct: 110 RKFGRMKLVSLDNYMNEIPLCKLGPEPFNAKLEDIY--PKLHKSNLPIKHAILDQSIIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + L+P L + + + +LI+ +L +AI GG+++ + Sbjct: 168 IGNIYANEICFAMGLNPNTPACKLTKKS------VQELIEVSSAILNEAIAQGGTTIHSF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ + + P CG I ++ GR T+YC +CQK Sbjct: 222 -SANGIDGLFQVKLKAHLQKVCPI---CGGEITKVAIKGRGTYYCKHCQK 267 >gi|89900446|ref|YP_522917.1| formamidopyrimidine-DNA glycosylase [Rhodoferax ferrireducens T118] gi|122479442|sp|Q21XW7|FPG_RHOFD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89345183|gb|ABD69386.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodoferax ferrireducens T118] Length = 271 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 141/294 (47%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ R + + V + + K LR+ P + G+ + V RR Sbjct: 1 MPELPEVEVTRLSFAFEIAGARVISVRIG-KPLRWPLGCSPTQLA----GRSVQAVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIY 116 KYLLI+L+ L ++VHLGMSGS S A+ + H+H ++ T T Sbjct: 56 KYLLIDLDQGL-LLVHLGMSGSL-----SFARQLPPAGAHDHFEMTTTLGTLRL------ 103 Query: 117 NDPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + + + L LG EP + F+ + ++ + +K LL Sbjct: 104 TDPRRFGAVVYAKGEDAPEAHKLLGKLGMEPLSDDFDVDRFHDELKRRRAAIKQVLLAGD 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GNIY EAL+ A + P L + +L I+ VL A+ GGS+ Sbjct: 164 TVVGVGNIYASEALFMAGIRPTLSAARLSRPRSA------RLHAAIRDVLARAVATGGST 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ G G+FQ VY + G+PC C I+ + Q RSTFYC +CQK Sbjct: 218 LRDFSSAKGENGHFQLEAMVYARQGQPC-RVCATPIKSLRQGQRSTFYCPHCQK 270 >gi|319795625|ref|YP_004157265.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] gi|315598088|gb|ADU39154.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] Length = 270 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 147/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + K LR+ A G+ + +V RR KYL Sbjct: 1 MPELPEVEVTRRGFADRIAGARIESVRIG-KPLRWAL-MVVPEALVGRHVREVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ MSGS + A P P H L + T + NDPR Sbjct: 59 LIDLDQGLLLLHLG-MSGSLRFD---TALP---PPGTHDHFDLVTDRGTLRL----NDPR 107 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V+ + + L LG EP ++F+ K+ + +K LL +V G Sbjct: 108 RFGAVVYVDDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKTTVKQVLLAGDVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL++A + P + + KL ++++L A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFQAGIRPTLSAARISRPRAA------KLHAAVREILARAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++DG GYFQ +VYG+ GEPC C IR++ Q RST++C CQK Sbjct: 222 SNVDGQNGYFQLEATVYGRAGEPC-RVCATPIRQLRQGQRSTYFCPNCQK 270 >gi|220909541|ref|YP_002484852.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] gi|219866152|gb|ACL46491.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] Length = 293 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 147/304 (48%), Gaps = 32/304 (10%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAAT-----RGKKIIDV 53 MPELPEVE +RR L + + + D+ L R H FS A +G +I Sbjct: 1 MPELPEVETVRRGLEQLTLGRKCLGGDVLLQRT-----ISHPFSVAEFLDGLQGTRIECW 55 Query: 54 SRRAKYLLIEL-EGNLSII------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 RR KYLL +L + N + VHL M+G + +S +P++ +H V + + Sbjct: 56 QRRGKYLLADLVDANYPKLRRGWLGVHLRMTGQLLWLESS--QPLQ--KHTRVRLFFADA 111 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKN 164 ++ + + + D R FG M V + + LGPEP F+ YL Q + Sbjct: 112 ASSLPWELRFVDQRTFGQMWWVSPEQRPEQIISGWGKLGPEPFSPDFSVAYLFQQLQQSR 171 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +KNALL+Q +VAGIGNIY EAL+ + + P+ L P + KL I V Sbjct: 172 RPIKNALLDQTLVAGIGNIYADEALFCSGIHPLTPCAEL-----RPAQV-EKLQGAIISV 225 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L ++ GG++ ++++ G G + VY + GEPC CG I RI AGRST +C Sbjct: 226 LQASLAEGGTTFSTFLNVRGVNGNYGGQALVYDRRGEPC-HTCGTAIERIKLAGRSTHFC 284 Query: 285 TYCQ 288 CQ Sbjct: 285 PQCQ 288 >gi|225021994|ref|ZP_03711186.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] gi|224945280|gb|EEG26489.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] Length = 308 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 40/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+ D+ +H + +R F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTIADVAVHHPRAIRHVLGGEGEFRSEILGRSIIGLGRRG 60 Query: 58 KYLLIELE---------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 K+L + L G+ ++VHLGMSG +I+ ++ +P+ Sbjct: 61 KFLWLNLADPAVAAASASSGPTSQPTPQAGDQVVVVHLGMSGQMLIKDSNANS--DDPKF 118 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNA 153 H I + + NT+ + V D R FG+ LV+ L + + D Sbjct: 119 KHCRIQVRFDDNTQLWFV---DQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDPELKL 175 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 SEVASMMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTL------DPAA 229 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG ++ Sbjct: 230 LKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPC-DRCGTILV 288 Query: 273 RIVQAGRSTFYCTYCQ 288 + RS+ YC +CQ Sbjct: 289 KEKFTNRSSHYCPHCQ 304 >gi|266618592|pdb|3GPU|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec4-Loop Deletion Complex Length = 256 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 38/291 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRAK 58 PELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNI-IRHPRDSEAFAARMIGQTVRGLERRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + S +P++ H HV T+ + + Y D Sbjct: 60 FLKFLLDRD-ALISHLRMEGRYAV--ASALEPLE--PHTHVVFCFTDGSELR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 110 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ G Sbjct: 170 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKG------ 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 218 -----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 256 >gi|124516591|gb|EAY58099.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum rubarum] Length = 291 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 46/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--------DICLHRKNLRFDFPHHFSAATRGKKIID 52 MPELPE E IR ++ + V +I + + R F+ GK +I Sbjct: 1 MPELPEAEAIRLPVLRFFSDGVVESIRRGSNKNIWIGEEEYRLGELFLFNVRRTGKVLIF 60 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 R K L +I LGMSG+++I+H +P+ P H H+ IS N + Sbjct: 61 DWRTTKEKTAVL-----LISRLGMSGTWLIQH--LREPL--PDHCHLVISFKNLA----H 107 Query: 113 RVIYNDPRRFGFMDLV---ETSLKYQYPPLRTLGPE----PADNSFNAIYLTHQFHKKNS 165 R++Y DPRRFG ++ E+S+ L + GP+ PAD Q K + Sbjct: 108 RLVYRDPRRFGRLEWTFEEESSVI-----LASQGPDILKIPADE------WHRQARKSSR 156 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +++ LL+QKI +GIGNIY E L+ A LSP R +SL + Y+++ +++L Sbjct: 157 TIRSLLLDQKISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAAREIL 210 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 AI +GGS++ + G G +Q+ VYG+ G+PC +C I+ + +A R+ FYC Sbjct: 211 EAAIRSGGSTIHSFQTSLGEDGRYQDRHIVYGRAGKPC-PHCSTPIQSVKEASRTLFYCP 269 Query: 286 YCQK 289 +CQK Sbjct: 270 FCQK 273 >gi|72080906|ref|YP_287964.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 7448] gi|71914030|gb|AAZ53941.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae 7448] Length = 275 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIRRNLMMV-----MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEV + L +KN+ D ++ FDF AT IID+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNAT----IIDIQN 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ---HNHVTISLTNNTNTKKY 112 RAK++LI L+ I+ HL M+G + K+PQ +++++ ++N+ Sbjct: 57 RAKHILIFLDNRKVILSHLRMNGKYF--------TYKSPQWGKYDYISFVFSDNSVLN-- 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 YND R+FG + + L ++ PL+ L PEP + Y + K ++K LL Sbjct: 107 ---YNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDDFY--QKIRKSTRSIKAILL 161 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QKI++G+GNIY E + K+ P K LI I + +K+L ++I G Sbjct: 162 DQKIISGLGNIYADEVCFATKIFP-GKAAKLISRKEAELIIYFS-----KKILQESIKLG 215 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+ Y ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 216 GSSISSYTSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|300214317|gb|ADJ78733.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus salivarius CECT 5713] Length = 207 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/227 (36%), Positives = 119/227 (52%), Gaps = 32/227 (14%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +I HL M G + +E ++ K ++ +H HV T+ T+ + YND R+FG M LV+ Sbjct: 1 MISHLRMEGKYFVEPST--KEVE--KHTHVVFDFTDGTSLR-----YNDVRKFGRMQLVK 51 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+GNIY E L Sbjct: 52 TGVEMQTAGLAKLGPEPKEETFIVEDFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVL 111 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID--------AIDAGGSSLRDYVH 241 W +K+ P TP + KL +E KVL D A +AGG+++R Y Sbjct: 112 WMSKIHP-----------ETPAN---KLTEEEVKVLRDNIIKELALATEAGGTTIRSYTD 157 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G FQ + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 158 AFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 203 >gi|294155508|ref|YP_003559892.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] gi|291600003|gb|ADE19499.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] Length = 274 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ L ++K + ++ ++ K ++ F + K I + KY Sbjct: 1 MPEYPEVTVVTNALNEIVKFKKIKEVIVNLDKIIKNVDVEKFKNTLKDKVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I+ E + SII H+ M G F E + ++N +H+ + + ++IYND Sbjct: 61 IVIKFESDWSIIAHMRMEGKFFYETNNF---LRNKKHDLIIFVFDDGN-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG MDL + +P + LG P N +A + + +K + +K LL+Q++V G Sbjct: 113 RRFGTMDLHYGDVN-NFPKISKLGNLP--NQLDASKIMDKCKRKTTAIKTTLLDQELVLG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI-QKVLIDAIDAGGSSLRD 238 IGNIY E L+ +K++P+ K + + N +K I ++ +I+ GGS++ Sbjct: 170 IGNIYADEILYASKINPLTKAKDISLNQ-------WKTILNFGHTIMTRSIELGGSTVNS 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y I+ G +QN VYGK E C + C +I GR T YC CQK Sbjct: 223 YSSINNKEGSYQNELKVYGKYKEFC-TTCKSQFEKIKVNGRGTTYCPKCQK 272 >gi|320108584|ref|YP_004184174.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] gi|319927105|gb|ADV84180.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] Length = 270 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 33/295 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAAT-RGKKIIDVSRRAKY 59 MPELPEVE + + + + + L K P T G +I V R K Sbjct: 1 MPELPEVETVANGVHERVHGRRIQHVTLGTKPEPLKSPAALIEETLTGARIERVHRVGKT 60 Query: 60 LLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ +L + VHLGM+G ++ ++ P H H ++L + + + Sbjct: 61 IVFDLLRDKKPAQFTVHLGMTGRLLVSKGE----VEVPPHTHAILALDDEREIR-----F 111 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD---NSFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG + ++ Y G EP F A+ F + + +K ALLN Sbjct: 112 VDPRRFGRLAVIAPQTTYA-----GTGQEPLTIGLEDFIAL-----FRSRKTPIKAALLN 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++ G+GNIY E+L+RA + P R+ L + L +L ++ VL AI GG Sbjct: 162 QSLLHGVGNIYADESLFRAGIRPKRQAGRLTRAE------LARLHTALKDVLKHAIQLGG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 SS+ DYV DG G+FQ VY +TG+PCL C I++I GRST +C CQ Sbjct: 216 SSVSDYVDADGVRGFFQLEHKVYMRTGQPCLV-CETPIKKITVGGRSTHFCPVCQ 269 >gi|54020255|ref|YP_116103.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 232] gi|53987428|gb|AAV27629.1| foramidopyrimidine DNA glycosylase [Mycoplasma hyopneumoniae 232] Length = 275 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIRRNLMMV-----MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEV + L +KN+ D ++ FDF AT IID+ Sbjct: 1 MPELPEVITVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNAT----IIDIQN 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ---HNHVTISLTNNTNTKKY 112 RAK++LI L+ I+ HL M+G + K+PQ +++++ ++N+ Sbjct: 57 RAKHILIFLDNRKVILSHLRMNGKYF--------TYKSPQWGKYDYISFVFSDNSVLN-- 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 YND R+FG + + L ++ PL+ L PEP + Y + K ++K LL Sbjct: 107 ---YNDSRKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDDFY--QKIRKSTRSIKAILL 161 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QKI++G+GNIY E + K+ P + + + + +I +K+L ++I G Sbjct: 162 DQKIISGLGNIYADEVCFATKIFPGKAAKLISRKEAEL------IIDFSKKILQESIKLG 215 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+ Y ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 216 GSSISSYTSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|108760481|ref|YP_634069.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108464361|gb|ABF89546.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] Length = 290 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 24/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEI RRNL+ + + + + R F A T ++ + RR KY Sbjct: 1 MPELPEVEIARRNLVRWFSDRRIVRAESENTRIFRGAERQQFDALT--GRLESLVRRGKY 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL EG ++ HLGM+G F+ P ++ L + + + ++DP Sbjct: 59 LLFAFEGGKGLMGHLGMTGKFVRRTEGQVAP-----YSRARFHLDDG-----HVIHFSDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++ + + +R LG +P + A L LK AL++Q+ ++G Sbjct: 109 RMFGRLEPAPAARLRELDAVRILGRDPLADGLTAGQLQQAVGSSRKELKVALMDQERISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI+ EAL+RA L P R+ SL TP D +L+Q I+ ID G Sbjct: 169 LGNIHAAEALFRAGLHPSRQPGSL-----TP-DEWKRLVQAIRAT----IDFGLKEQEGE 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G +N F VYG+ G PC S CG + Q GR+T +C CQ Sbjct: 219 EPVYLEEGRSENPFQVYGRAGSPC-SQCGTRVESFTQGGRTTHFCPRCQ 266 >gi|158335652|ref|YP_001516824.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] gi|189044582|sp|B0C5D4|FPG_ACAM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158305893|gb|ABW27510.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] Length = 284 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 140/297 (47%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L V M + ++ R P F + + RR K Sbjct: 1 MPELPEVETVRLGLEKVTVGMQIMGGEVLYPRTIAHPQSPQVFIQGLQDATFLSWMRRGK 60 Query: 59 YLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + VHL M+G + + +P++ +H V + NN + Sbjct: 61 YLLSQLSFSTQQPSGWLGVHLRMTGQLL--WVAQDEPVQ--KHTRVRLFFVNNRELR--- 113 Query: 114 VIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG M V + K L+ LGPEP F+ Y + ++K+AL Sbjct: 114 --FVDQRTFGQMWWVAPTEDPKQVISGLQKLGPEPFSEEFSVDYFWESLQGRKRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY EAL+ +++ P L + + +L I +VL +I A Sbjct: 172 LDQALVAGVGNIYADEALFMSEIRPTTACHQL------QTEQVQRLRTAIIEVLSTSIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+ G+PC CGQ I RI GRST +C CQ Sbjct: 226 GGTTFSDFRDLKGVNGNYGGMAWVYGRQGQPC-RTCGQTIERIKLVGRSTHFCPQCQ 281 >gi|188524384|ref|ZP_03004411.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273789|ref|ZP_03206323.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|195660050|gb|EDX53430.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249544|gb|EDY74326.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] Length = 277 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 138/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H K L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N + YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKF---YYQPKDEWFNLAHTHIIIEFENGMQLR-----YNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L T KD + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDL-----TIKD-YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC CG +IR+ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPC-QTCGTIIRKTKVNGRGTYYCSNCQ 274 >gi|332527362|ref|ZP_08403418.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] gi|332111771|gb|EGJ11751.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] Length = 274 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 143/293 (48%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V + L K LR+ A G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIDEPLRGAEVLAVRLG-KALRWPL-GVAPQALLGARVLPVQRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G + L + S + A P P H+H + ++ T + DPR Sbjct: 59 WLPLLGGCGGGLLLHLGMSGSLA-LHPAAPAPGP-HDHFDLVTSHGT------LRLTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH----KKNSNLKNALLNQKI 176 RFG V S PP TL F+A FH + + +K LL+ +I Sbjct: 111 RFG---AVVWSPSTADPPAATLLAALGAEPFDATLTPQSFHAALQRHRTPIKAMLLSGRI 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G GNIY CEAL +A + P R + +L+Q +++ L AI+ GGS+L Sbjct: 168 VVGAGNIYACEALHQAGIHPATPCRRIGPLRAA------RLLQALRETLAQAIELGGSTL 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G G FQ+ VYG+ GEPC CG +RR+VQA R+T++C CQ+ Sbjct: 222 RDFRDAHGMNGEFQHHARVYGRAGEPC-PRCGAAVRRVVQAQRATYFCAACQR 273 >gi|237725655|ref|ZP_04556136.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D4] gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4] Length = 276 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE I+R + + + + + H + + + + F T G+ I +SRR KY Sbjct: 1 MPEMPEVETIKRIIEPQIVGVKIDSVITNHSQVIAYPDMYRFEQETNGQTINKMSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I + +I+HL M+G ++ T P++N H H+ ++L+N T + Y D Sbjct: 61 LTIHFDSGDRLILHLRMTGQLLV--TPHNYPMEN--HTHLIMNLSNGTQLR-----YIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RR G L + L LG EP DN+ A YL K+ +K L +Q ++AG Sbjct: 112 RRLGRFWLFGKNDIDDKSGLEKLGMEPLDNNLTAPYLVAHLSKRKRPIKEMLHDQTVIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L A + P + L L+ +I++++ ++I+ S ++Y Sbjct: 172 IGNIYSDEILHAAGIYPGKYCSDLSDKEWN------SLVVKIREIIRNSIETNRMSPQEY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ GE C NCG +I +IV GRS+ YC +CQK Sbjct: 226 LEGKGKEYRNMPYLRVYGQKGERC-KNCGSIIEKIVIGGRSSCYCPHCQK 274 >gi|115372595|ref|ZP_01459902.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|310823827|ref|YP_003956185.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|115370316|gb|EAU69244.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|309396899|gb|ADO74358.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] Length = 281 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/293 (31%), Positives = 138/293 (47%), Gaps = 32/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-----DICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVEI RRNL+ + V D + R R F +A +G+ + + R Sbjct: 1 MPELPEVEIARRNLVRWIGPRRVVKAEADDTRVFRGAERARF-----SALKGR-VESLER 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYLL E ++ HLGM+G F+ +P ++ L + T + Sbjct: 55 RGKYLLWTFEAGRGLLAHLGMTGKFVRRQKGQPEP-----YSRARFHLEDGTV-----IH 104 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + DPR FG M+ V S +++LG +P ++ L +LK AL++Q Sbjct: 105 FRDPRLFGRMEPVPASELRALEAIQSLGRDPLEDGLTGPQLAEAVGTSRQDLKVALMDQG 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNI+ EAL+RA L P RK +L TP+D +L + I + ++ Sbjct: 165 RLAGLGNIHAAEALFRAGLHPARKPDTL-----TPED-WKRLARAIHATIAFGLEEQEGE 218 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y+ G+ +N F VYG+ G+PC C + QAGR+T C CQ Sbjct: 219 EPVYLEDGGA----ENVFRVYGRAGQPC-QVCQSPVESFTQAGRTTHVCPECQ 266 >gi|253700705|ref|YP_003021894.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] gi|251775555|gb|ACT18136.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] Length = 271 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAVHSPKLRTLVPPELPSILAGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + H+H + L + + ND R Sbjct: 61 IITCRQG-SLLLHLGMTGHLRLVPAGAGAG----AHDHFDLVLESGLILR-----LNDVR 110 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + LK++ LR +GPEP + YL + K + L+ L++ +VAG Sbjct: 111 RFGSIHFTSGDPLKHKL--LRGIGPEPLTDELTGHYLYRKSRGKKAPLQRFLMDSSVVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+R + P + SL + + +L I+K L +I+AG + D+ Sbjct: 169 LGNIYAAETLFRCGMLPFTQAGSLSEGD------CDRLCDCIKKTLAASIEAG--RVMDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTF+C CQ Sbjct: 221 TVREEKLVYFPQQLYVYGREGLAC-RECGSAIERGRLGNRSTFHCPRCQ 268 >gi|305680813|ref|ZP_07403620.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] gi|305659018|gb|EFM48518.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] Length = 312 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/320 (30%), Positives = 147/320 (45%), Gaps = 44/320 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+TD+ +H + +R F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTITDVAVHHPRAIRHVLGGEGEFRSEILGRTIIGLGRRG 60 Query: 58 KYLLIELE-------------------------GNLSIIVHLGMSGSFIIEHTSCAKPIK 92 K+L + L G+ ++VHLGMSG +I+ ++ Sbjct: 61 KFLWLNLADPAAATASASSVPTSQPTPQATPQAGDQVVVVHLGMSGQMLIKDSNANS--D 118 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADN 149 +P+ H I + + +T+ + V D R FG+ LV+ L + + D Sbjct: 119 DPKFKHCRIQVRFDDDTQLWFV---DQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 ELKLSEVAATMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTL------ 229 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG Sbjct: 230 DPAALKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPC-DRCG 288 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 ++ + RS+ YC +CQ Sbjct: 289 TILVKEKFTNRSSHYCPHCQ 308 >gi|323141559|ref|ZP_08076444.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] gi|322413971|gb|EFY04805.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] Length = 270 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 4 LPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PEVE +R+ L + K + +I L R +++ P F GK I V RR KYL+ Sbjct: 1 MPEVEQVRKTLAPHIEGKKILAVEIYLERL-IKYPQPDAFIKGLVGKTISSVGRRGKYLV 59 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + +IVHL M+G+ + + ++ P + + +L+++ + + D R Sbjct: 60 LHTAPKQQLIVHLRMTGALLAQPSA----APAPAYAKIKFTLSDDVT-----MWFTDIRT 110 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + LV + Y TLGPEP F A YL K +K+ +L+Q+I+AG+G Sbjct: 111 FGTLYLVTDNDTY-IEGYETLGPEPLSEGFTAGYLLPLAQKSKKAIKSFILDQQIIAGLG 169 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L + + P+RK SL + +L + + V+ I G++ RDY Sbjct: 170 NIYADECLALSGILPMRKACSLSAAE------VGRLCEAVNAVIAQGIKNRGTTFRDYKD 223 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G+ G QN VYG+ G+PC CG +++ GR T YC +CQK Sbjct: 224 GEGNKGDNQNHLLVYGRGGKPC-KKCGALLQTTKVGGRGTVYCEHCQK 270 >gi|73749072|ref|YP_308311.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|147669837|ref|YP_001214655.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. BAV1] gi|289433049|ref|YP_003462922.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] gi|73660788|emb|CAI83395.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|146270785|gb|ABQ17777.1| DNA-(apurinic or apyrimidinic site) lyase [Dehalococcoides sp. BAV1] gi|288946769|gb|ADC74466.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] Length = 270 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 143/296 (48%), Gaps = 35/296 (11%) Query: 1 MPELPEVEIIRRNLM--------MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID 52 MPELPEVE ++ +M + M+ + +C + F+A G + Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIRMEALWAKTLCPPEAD--------FNALASGTCVTG 52 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 +SRR KY++I L L I VHL MSG A +N Q T ++ + N ++ Sbjct: 53 LSRRGKYIIISLSSGLFISVHLKMSGGLT------AIRAENGQAPRFTRAIFHLENGEQ- 105 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V + D R+FG + L L L LGPEP + +F A H+ + +K LL Sbjct: 106 -VYFTDIRKFGRITL----LAGLDSVLEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLL 160 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GN+Y EAL++A L+P+R SL + +L IQ VL AI Sbjct: 161 DQKVLAGVGNMYADEALFKACLNPLRSAESLSMAE------VERLHSAIQSVLHKAIQNK 214 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+S+ Y DGS G Q F+V + GE C CG I R + R+ ++C CQ Sbjct: 215 GASVSTYHRPDGSKGGAQLEFNVAHRRGESC-PVCGAPITRQLIRQRACYFCPRCQ 269 >gi|171920859|ref|ZP_02932023.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178962|ref|ZP_02964719.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024108|ref|ZP_02996848.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518256|ref|ZP_03003784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195867830|ref|ZP_03079830.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209554312|ref|YP_002284850.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550503|ref|ZP_03771452.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551254|ref|ZP_03772200.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903064|gb|EDT49353.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209239|gb|EDU06282.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019158|gb|EDU57198.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998107|gb|EDU67204.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660527|gb|EDX53784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209541813|gb|ACI60042.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379069|gb|EEH01434.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379657|gb|EEH02019.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 277 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H K L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N + YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKF---YYQPKDEWFNLAHTHIIIEFENGMQLR-----YNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L T KD + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDL-----TIKD-YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC CG +I++ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPC-QTCGTIIQKTKVNGRGTYYCSNCQ 274 >gi|221068913|ref|ZP_03545018.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] gi|220713936|gb|EED69304.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] Length = 279 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 142/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L K LR+ A G+ ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEAATLG-KPLRWPLGLQPQALV-GRVVLGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS A + H+H + T + + +DPR Sbjct: 59 LLDLS-EGLLLMHLGMSGSLRFAGRDEAPLGEGGPHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V S L LG EP F L S +K LL+ +V G Sbjct: 112 RFGAVVYVPGESDALARKLLDHLGMEPLSEGFTLAALKAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + T L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPATPARDVGARKVT------ALYEAIRAVLAMAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC ++CG IR + Q RST+YC+ CQK Sbjct: 226 SAANGMEGHFQLQAQVYGRDGLPC-THCGAAIRLMRQGQRSTYYCSSCQK 274 >gi|323490454|ref|ZP_08095661.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] gi|323395858|gb|EGA88697.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] Length = 289 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 157/305 (51%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMV-----MKNMTVTDIC-LHRKNLRFDFPHHFSA-----ATRGKK 49 MPELPEVE + R + V ++ + V+D+ L ++N + A G + Sbjct: 1 MPELPEVEGVVRQIRPVSIGKKIEAVAVSDVIRLSKENGKEAIIKRIEADGFIKRLTGAQ 60 Query: 50 IIDVSRRAKYLLIEL--EGNLSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLTNN 106 I+ V RR+KY+ L + ++ HLGMSG+ F ++ K +H H+ ++L++ Sbjct: 61 IVRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYVDQLQSIPEDKFRRHVHIVLTLSSG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQFHKKN 164 + ++D RRFG M +++ + +PPL + PEP S +LT KN Sbjct: 121 N-----LLAFSDIRRFGEMRVLQE--EGDFPPLLLMAPEPFHESALEHFLTMAESPKYKN 173 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++ +I++G GNIY EAL++ K+ P R + + +L + I + Sbjct: 174 KAIKEIIMDGQIISGCGNIYATEALFKMKIHPKRAASRISRKRKV------ELFESIVAI 227 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L ++I AGGS++ DY I+G G QN F +YGK + C ++CG + + GR++ YC Sbjct: 228 LQESIRAGGSTISDYRDINGESGSMQNRFGMYGK--KQC-ADCGTATKTLKIGGRASVYC 284 Query: 285 TYCQK 289 CQK Sbjct: 285 PTCQK 289 >gi|282857884|ref|ZP_06267090.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] gi|282584266|gb|EFB89628.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] Length = 294 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+++ ++ + + L R++ + P F G+ + + RR K+ Sbjct: 1 MPELPEVEMVKNVTAPQIRGRRIEKVALERRDVIAHPAPDDFVELVTGRAVTGMGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTNNTNTKKYRVIYN 117 L L+ +++HL M+G ++ P + P +H SL+ + + Sbjct: 61 LRFFLDDGAEMVLHLRMTGRLLV------VPPEFPAEKHTRAVFSLSGRLQLR-----FA 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D RRFG L++ K + LGPEP D +++L + +K LL+Q++V Sbjct: 110 DLRRFGRFWLLQKGEK-DCTGMDKLGPEPFDAGLTSVWLKERLGASRRAVKTCLLDQRVV 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+ A++ P R SL + + L + I+E+ + ++ ID S Sbjct: 169 AGIGNIYGDEILFAARIRPTRAASSLSRPEW---ERLTRAIREVMRFHVEQIDV---SAE 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++ G+ VYG+ G+PC CG ++R V GRS+ +C CQK Sbjct: 223 EFLRGRGTEYRNTPLLKVYGRDGDPC-PVCGATLQRAVVGGRSSVFCPRCQK 273 >gi|297626606|ref|YP_003688369.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922371|emb|CBL56943.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 301 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNL-RFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ + + L + L R D P F + G++ + RR Sbjct: 1 MPELPEVEVVREGLAQFVEGRRIDAVRVLDARALKRHDGGPDDFVGSLVGRRCDEPRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL I L+G ++I HLGMSG F ++ + P+ P+H V I++ + T + + Sbjct: 61 KYLWIPLDGRDALIAHLGMSGQFRVD--APGAPL--PRHARVVITMDDGTQLR-----FV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + P +R + +P D F + + K++ +K ALL+Q +V Sbjct: 112 DQRLFGSLAYCPGGAGLPEP-IRHIALDPFDPHFRVEAVAGRLQAKHTTVKRALLDQTLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALW A + T SL+ +++ V A+ AGG+S Sbjct: 171 SGIGNIYADEALWLAHTNYEHPT-SLLSTR-----RARAVLRRAADVRRRALAAGGTSFD 224 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV++ G GYF +VYG+ G+PC CG I R RS++ C CQ+ Sbjct: 225 ALYVNVHGDSGYFARGLAVYGRDGQPC-PRCGTAIVRQRFMNRSSYLCPRCQR 276 >gi|85710813|ref|ZP_01041874.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] gi|85695217|gb|EAQ33154.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] Length = 197 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 17/203 (8%) Query: 90 PIKNP--QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 PI+ P +H+H+ I T + NDPRRFG + ET+ ++ L LGPEP Sbjct: 9 PIETPRVKHDHIEIEFTTGQCLR-----LNDPRRFGALLFTETNAD-EHKLLAMLGPEPL 62 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + FNA YL + K +K +++ V G+GNIY EAL++A + P R Sbjct: 63 TDEFNADYLFERSRNKKQPIKTFIMDNHQVVGVGNIYANEALFKAGIHPKRAA------- 115 Query: 208 GTPKDILY-KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 G + Y +L++ I++ L +AI GG++LRD+ +DGS GYF VYG+ G+ C+ Sbjct: 116 GAISKVRYERLVKHIKETLAEAIRQGGTTLRDFTRVDGSPGYFAQKLQVYGRGGKMCMV- 174 Query: 267 CGQMIRRIVQAGRSTFYCTYCQK 289 C + +R I RST YCT CQ+ Sbjct: 175 CKKPLREIRLGQRSTVYCTQCQR 197 >gi|242373980|ref|ZP_04819554.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] gi|242348334|gb|EES39936.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] Length = 290 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 43/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + +KN + + K + D F+ T Sbjct: 1 MPELPEVEHVKRGIEPYIKNERIKKVIFSDNVIKGKKDNRETIIKGMELD---SFAKLTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I V RR+KY+++ +E + +I HLGM+G F + + I P +H V Sbjct: 58 GYTITQVLRRSKYIVLHIERDNDQRILISHLGMAGGFFV--VDDLEDIATPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L N +++Y+D RRFG ++ + YPP + PEP + A YL+ Sbjct: 116 FELENEK-----KLVYSDIRRFG--EIRNVAGFESYPPFLEIAPEPFEEEALAHYLSCFD 168 Query: 161 HKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K +N +K +L+ K++AG GNIY CEAL+RA + P + +L +++L+ + Sbjct: 169 INKYANKPIKQMILDHKVIAGAGNIYACEALFRAGVRPDKIAHTLTHQE---REMLFYYV 225 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 +E VL + I GG+S+ DY H DG G Q +VY + CG I V A Sbjct: 226 RE---VLKEGIKYGGTSISDYRHADGKTGEMQLHLNVYKQK---YCKICGHEIETKVIAT 279 Query: 279 RSTFYCTYCQK 289 R++ +C CQK Sbjct: 280 RNSHFCPNCQK 290 >gi|25028531|ref|NP_738585.1| formamidopyrimidine-DNA glycosylase [Corynebacterium efficiens YS-314] gi|259507586|ref|ZP_05750486.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|29611717|sp|Q8FP17|FPG_COREF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23493816|dbj|BAC18785.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259164765|gb|EEW49319.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 285 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 145/302 (48%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMT-VTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T V+ +H + R A G ++ +RR Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60 Query: 58 KYLLIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L +EL+ L ++VHLGMSG +++ NP H L + Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQMLVKSPDATL---NP-HLRARAELDDGNE-- 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRT--LGPEPADNSFNAIYLTHQFHKKNSNLK 168 V + D R FG+ L E P R + + D++ + L KN+ +K Sbjct: 115 ---VWFVDQRTFGYWWLGEL---VDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEIK 168 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LLNQ+IV+GIGNIY E LW A + P +K + L L++ ++V+ A Sbjct: 169 RLLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTR------LVALLEAGREVMTRA 222 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +D GG+S YV+++G+ GYF + + YG+ G+PC + CG I R R + +C C Sbjct: 223 LDQGGTSFDALYVNVNGASGYFSLSLNAYGQAGKPC-ARCGTPIARETFMNRGSHFCNRC 281 Query: 288 QK 289 QK Sbjct: 282 QK 283 >gi|91787193|ref|YP_548145.1| formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] gi|123355948|sp|Q12DZ5|FPG_POLSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91696418|gb|ABE43247.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] Length = 271 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 148/299 (49%), Gaps = 39/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE+ R + + + + + K LR+ P G +++ V RR Sbjct: 1 MPELPEVEVTRLSFAGRIAGARIEAVSMG-KPLRWPLGCSPQQLV----GLRVLAVRRRG 55 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL++L L +++HLGMS + +S + P K H+H + + T + N Sbjct: 56 KYLLVDLSDGL-LLIHLGMS-GSVSFGSSLSSPGK---HDHFDMVTSLGT------LRLN 104 Query: 118 DPRRFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 DPRRFG + D V L L LG EP ++F+A + + +K Sbjct: 105 DPRRFGAVVYAGDEHDAVAHKL------LGRLGVEPLSDAFDAALFHQALKPRQTPIKQV 158 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL + V G+GNIY EAL+ A + P K + + P+ L L + I++VL A+ Sbjct: 159 LLGGEAVVGVGNIYASEALFLAGIRPTTKASRISK----PRAAL--LHRAIRQVLTQAVT 212 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+ + G G+FQ VY + G PC CG I+ I Q RSTFYC CQK Sbjct: 213 KGGSTLRDFSNAQGEAGHFQLDAMVYDRAGMPC-KVCGSPIKSIRQGQRSTFYCVSCQK 270 >gi|197120708|ref|YP_002132659.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] gi|196170557|gb|ACG71530.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] Length = 280 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ +P P+H + L + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLRGAE--EPA--PRHARAWLRLEGGGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIQPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + K + ++ ++ +DA D G Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAGA--KALAAGILASF-RMTLDAED--GP 226 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-----RIVQAGRSTFYCTYCQK 289 + YV G+ +N F VY + GEPC C + R R+VQA RSTF+C CQ+ Sbjct: 227 EI-TYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPILRVVQAQRSTFFCPRCQR 280 >gi|218441992|ref|YP_002380321.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] gi|218174720|gb|ACK73453.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] Length = 277 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 145/293 (49%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE + R L + + + + ++ L R L + F F G KI RR Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLPR-TLAYPFSIAEFWEGITGTKINLWQRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL L+ + VHL M+G + + I P+H + + L + + + Sbjct: 60 KYLLALLDCGGYLGVHLRMTGQLLW----VKRDISYPKHTRLRLFLGEDQELR-----FV 110 Query: 118 DPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + + + S + L+ LG EP +F+ YL H+ +K+ LL+Q+ Sbjct: 111 DTRTFGKVWWIPPDQSPEKIITGLQKLGVEPFSQAFSVEYLQHKLKTSRRKIKSVLLDQE 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAGIGNIY EAL+++ + P SL TP+ L KL I VL +ID GG++ Sbjct: 171 VVAGIGNIYADEALFKSGIRPDAIACSL-----TPQQ-LEKLRWAICDVLQTSIDKGGTT 224 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G G + VYG+ GE C CG I R+ GRS+ +C CQ Sbjct: 225 FSDFLSVTGVNGNYGGVAWVYGRGGESC-RVCGTPIERVKLGGRSSHFCPSCQ 276 >gi|296130132|ref|YP_003637382.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] gi|296021947|gb|ADG75183.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] Length = 324 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 47/319 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ + R R D P F+A G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVDVRRGYSVRRHDAGPLDFAARLVGRRLEAAVRRG 60 Query: 58 KYLLIELE-----GNLSIIVHLGMSGSFII---------------EHTSCAKPIKNPQHN 97 K+L + L+ G+ +++ HLGMSG ++ + + + P +H Sbjct: 61 KFLWLLLDEGAGRGDDALMAHLGMSGQLLVRGPAAGPAALDDAPGDPVATSGPTGWVEHP 120 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFM---DLVET---------SLKYQYP-PLRTLGP 144 H+ + L + + + + D R FG + DLV T S + P P+ + Sbjct: 121 HLRVRLRLDDGSA---LDFVDQRTFGHLSVPDLVPTPDGAPGGLGSARPAVPAPVAHIAR 177 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + + + + +K ALL+Q +V+G+GNIY EALWRA+L R T +L Sbjct: 178 DLLDPALDRDAVVAALRARRTEVKRALLDQTLVSGVGNIYADEALWRARLHGTRPTAALR 237 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 +++ +V+ +A+ GG+S YV ++G+ GYF + +VYG+ G PC Sbjct: 238 PVEA------RRVLDAAHEVMTEALGQGGTSFDALYVDVNGASGYFDRSLAVYGQDGRPC 291 Query: 264 LSNCGQMIRRIVQAGRSTF 282 CG +RR A RS++ Sbjct: 292 -RRCGTPVRRDAFANRSSY 309 >gi|33239822|ref|NP_874764.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931231|sp|Q7VDK6|FPG_PROMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33237348|gb|AAP99416.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 283 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L +K+ + D+ + R F G K + +RR K Sbjct: 1 MPELPEVETVKRGLKNRLKDFYIHDVEVITPRSISSEGGSKAFVKNIIGLKSGEWTRRGK 60 Query: 59 YLLIELEGNLS------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ L + +VHL M+G F K K+ +H V I N Sbjct: 61 YLICSLHSSDREEIAGWWVVHLRMTGQF----QWFQKKTKSCKHTRVRI-----WNKDGA 111 Query: 113 RVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M + + + L+ LGPEP FN YL K+ ++K++ Sbjct: 112 EIRFVDTRNFGQMWWISPTFLPTEKITGLKKLGPEPFSKEFNPFYLQESLKKRKRSIKSS 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q IVAG GNIY E+L++A + P ++++ L + + K+ + +L +I Sbjct: 172 LLDQSIVAGAGNIYADESLFQAGILPTKESKKLNKTE------IKKICTSLTHILKISIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S +D+ ++G G + VYG+ +PC CG I + AGR T +C CQK Sbjct: 226 EGGTSFKDFRDLEGVNGKYGGQAWVYGRENKPC-RKCGVKILKAKVAGRGTHWCPNCQK 283 >gi|332528609|ref|ZP_08404591.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] gi|332041925|gb|EGI78269.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] Length = 275 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 144/294 (48%), Gaps = 25/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAAT-RGKKIIDVSRRAKY 59 MPELPEVE R + ++ I + L +P + A G+++ V RR KY Sbjct: 1 MPELPEVEATR---LSFADHIADARIVSAWQGLPLRWPLGIAPAQLVGRRVRGVRRRGKY 57 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL++L+ + +++HLGMSGS + H+H + T + + NDP Sbjct: 58 LLLDLDEGM-LLLHLGMSGSLSFTDVAVHGTRPRGAHDHFDL------QTDRGLLRLNDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTL----GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RRFG + E+ Q P R L G EP D SF A K+ S +K LL Sbjct: 111 RRFGAVVWAESE---QAPIARKLLDGLGVEPLDESFEADAFHAALKKRRSAIKQVLLAGD 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY EAL+ A + P + + +L I+ VL A+ AGG++ Sbjct: 168 VVVGVGNIYASEALFIAGIRPSLSAARISKPRAE------RLHAAIRDVLGRALAAGGTT 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LR+Y + G G FQ VYG+ G PC + CG I+ + Q R+T+YC +CQK Sbjct: 222 LRNYSNAVGERGNFQFEAKVYGREGLPC-TVCGHPIKLMRQGQRATYYCVHCQK 274 >gi|239637990|ref|ZP_04678951.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] gi|239596553|gb|EEQ79089.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] Length = 290 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 146/309 (47%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + N T+ I K + D F T Sbjct: 1 MPELPEVEHVKRGIEPYAINTTINKITFSENVKKGKEDNRETIIKGMTLD---SFQRLTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS 102 G I + RR+KY++ + + +I HLGM+G F +++H +H V Sbjct: 58 GYTITKIERRSKYIVFYINRDSEQRILISHLGMAGGFFVVDHLEQITVPNYRKHWQVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQF 160 L N ++IY+D RRFG ++ S YP ++ PEP D +L T++ Sbjct: 118 LDNGK-----KLIYSDIRRFG--EIRNVSSFDAYPSFLSIAPEPFDEDAMQHFLDITNKK 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K +L+ K+++G GNIY CEAL+RA + P R T+ L Q K++++ Sbjct: 171 NYAKKPIKQVILDHKVISGCGNIYACEALFRAGILPSRLTQDLTQQE---KEMVF---YH 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 ++ VL + I GG+S+ DY H DG G Q +VY + CG I V A R+ Sbjct: 225 VRSVLNEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQKYCKVCGHSIETKVIASRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPTCQK 290 >gi|313813553|gb|EFS51267.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA1] Length = 280 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQ------HAPQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|121603812|ref|YP_981141.1| formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] gi|166198726|sp|A1VKP2|FPG_POLNA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120592781|gb|ABM36220.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] Length = 271 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + L K LR+ + +G++++ V RR KYL Sbjct: 1 MPELPEVEVTRLSFAERIAGARIEAV-LVGKPLRWPLGCE-TQQLQGQRVLAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS P+ +H+H + + T + +DPR Sbjct: 59 LLDLS-EGLLLMHLGMSGSVSF---GLNLPVTG-KHDHFDMVTSLGT------LRLHDPR 107 Query: 121 RFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 RFG + D V L L LG EP ++F+A+ + + +K LL Sbjct: 108 RFGAVVYASGEDDAVAKKL------LGRLGVEPLSDAFDALVFHQWLKGRKTAIKPLLLA 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + V G+GNIY EAL+ A + P K SLI K +L + IQ VL +A+ GG Sbjct: 162 GQAVVGVGNIYASEALFLAGIRPTTKA-SLIS-----KPRAARLHRAIQDVLTNAVAKGG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRD+ + DG G+FQ VY + G PC C I+ I Q RS+FYC CQK Sbjct: 216 STLRDFSNADGEAGHFQLDAMVYDRAGLPC-RVCAAPIKSIRQGQRSSFYCATCQK 270 >gi|295396032|ref|ZP_06806216.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] gi|294971120|gb|EFG47011.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] Length = 329 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 65/339 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---------HRKNLRFDFPHHFSAATRGKKII 51 MPELPEVE +R+ L + + + T+T + +N+ + F A G +I+ Sbjct: 1 MPELPEVESVRQGLSVWLTDATITRAQVLDARILGTTSARNVPIERVASFERALEGVRIV 60 Query: 52 DVSRRAKYLLI------------------------ELEGNLSIIVHLGMSGSFIIEHTSC 87 V RR KY+ + E++ ++ +HLGMSG I Sbjct: 61 SVERRGKYMWMPLAVGGLVGGGLVSDGEARDGEAAEVD-EWALAMHLGMSGQARIHEA-- 117 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP--------- 138 ++P H H ++ + D R FG + + L P Sbjct: 118 ----EDPLHPHTRAVFDVAGPAGVGQIRFVDQRIFGHLGVERLVLGVAGTPGATGTAGER 173 Query: 139 ------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 R G +P + F+ + +KN +K+ALL+Q++V+G+GNIY EAL+ A Sbjct: 174 RLVAESARGAGLDPFEVGFSVPMVARAIARKNVAIKSALLDQRVVSGVGNIYADEALFEA 233 Query: 193 KLSP-IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQ 250 + P R +R I + ++++ + V+ A++ GG+S YV+++G GYF+ Sbjct: 234 GVHPAARASRLRISR-------IERVLEAARDVMARALEVGGTSFDALYVNVNGESGYFE 286 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G+PC+ C I R+V GRST C CQK Sbjct: 287 RSLQVYGREGQPCV-RCSTPITRVVLGGRSTHVCVKCQK 324 >gi|159030210|emb|CAO91102.1| mutM [Microcystis aeruginosa PCC 7806] Length = 285 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 139/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + ++ L R + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGKKIIGGEVLLQRTLAYPNCEATFLQGITQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + PI H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPLPI----HTRLRFFFANQQELR-----FVD 111 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + L+ LG EP D +F YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTPDYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P + +L++ D+L K I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHP-QTAANLLKIEQI--DLLTK---NIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + + VYG+TGE C CG I RI +GRS+ +C CQ Sbjct: 226 SDFLHVTGVNGNYGSMAWVYGRTGENC-RLCGATIARIKLSGRSSHFCPQCQ 276 >gi|317121268|ref|YP_004101271.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] gi|315591248|gb|ADU50544.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] Length = 368 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 37/243 (15%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV- 128 +++HL M+G + C +P+ H H+ + + + R ++DPRRFG + L+ Sbjct: 128 LVIHLRMTGRLTL--ARCGEPLL--PHTHLILDVAGAAPWDQLR--FSDPRRFGRVYLLS 181 Query: 129 -------------------ETSLKYQYPPL----RTLGPEPADNSFNAIYLTHQFHKKNS 165 ET L+++ L RTLGPEP F A L + + + Sbjct: 182 KSPFSRRAVSGRARDTADRETELRHREDALPEGLRTLGPEPLSRRFTAAELARRLAGRRA 241 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K+ LL+Q+ VAG+GNIY EAL+RA++ P R L +P ++ +L++ +++VL Sbjct: 242 PVKSLLLDQRAVAGVGNIYADEALFRARIHPARPAGEL-----SPAEV-ARLVRALRRVL 295 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A+ AGG++ DY G G F + YG+ GEPCL CG I + GR+ +C Sbjct: 296 REAVAAGGTTFSDYRDGLGREGRFARRLAAYGRQGEPCL-RCGTPIATLRLGGRTAHFCP 354 Query: 286 YCQ 288 CQ Sbjct: 355 RCQ 357 >gi|260907270|ref|ZP_05915592.1| Formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 307 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 39/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-------ICLHRKNLRFDFP--HHFSAATRGKKII 51 MPELPEVE +R + T+T I R D F AA G++II Sbjct: 1 MPELPEVESVRVGVHEWTAGTTITGAEVIDPRILGTTSQRRIDASAVDGFIAAVTGRRII 60 Query: 52 DVSRRAKYLLIELEGNL-------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 RR K++ + L +L S++VHLGMSG + + + H H Sbjct: 61 AAERRGKFMWLTLGEDLGAGPAAEPAAPELSLLVHLGMSGQLRVHDAA------DEIHRH 114 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIY 155 L ++ ++ + D R FG + LV + + +P + +F Sbjct: 115 TRAILRLERGSESLQLRFIDQRIFGHLGVQPLVHAYGRLVPASANHIAADPLEPAFEPGL 174 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 Q +K + +K+ALL+Q +V+GIGNIY EAL+RA + P L T K L Sbjct: 175 ALEQLARKRTVVKSALLDQSLVSGIGNIYADEALFRAGIHP------LAIPARTRKSRLA 228 Query: 216 KLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 ++ +V+ DA+ GG+S YV+++G GYF A VYG+ G+ C+ CG I ++ Sbjct: 229 AVLDSATRVMSDALAVGGTSFDALYVNVNGESGYFDRALLVYGRGGQECV-RCGTEIEKM 287 Query: 275 VQAGRSTFYCTYCQK 289 GR + +C CQK Sbjct: 288 TIGGRGSHFCPNCQK 302 >gi|269794453|ref|YP_003313908.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269096638|gb|ACZ21074.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 309 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 149/316 (47%), Gaps = 43/316 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--------PHHFSAATRGKKIID 52 MPELPEVE +R L + V C+ +R D+ P F+A G ++++ Sbjct: 1 MPELPEVETVRDGLARHVLGARVD--CV---EVRRDYSVRRHEGGPVDFAARLSGHRLVE 55 Query: 53 VSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 +RR KYL + L E L+++ HLGMSG ++ S H V + LT T Sbjct: 56 AARRGKYLWLTLDEPGLALLGHLGMSGQLLVR--SGDTLTAESSHLRVRLHLTAADGTP- 112 Query: 112 YRVIYNDPRRFGFMDLVE-----TSLKYQYPPLRTLGPEP-------------ADNSFNA 153 + + D R FG + + E L L PEP A+ + Sbjct: 113 LALDFVDQRTFGHLSVTELVATPDGLPGGLGTDEPLVPEPVSHIARDLLDPAVAEGTAGR 172 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 L + ++ + +K ALL+Q +V+GIGNIY EALWRA R T G + Sbjct: 173 TALVDRVRRRRTGIKRALLDQTVVSGIGNIYADEALWRASTHYARGT------AGMSRAQ 226 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 + ++ ++V+ +A+ GG+S YV+++G+ GYF + + YG+ G+PC CG IR Sbjct: 227 VAAVLAAAEQVMREALSQGGTSFDALYVNVNGASGYFDRSLAAYGQAGKPC-RRCGATIR 285 Query: 273 RIVQAGRSTFYCTYCQ 288 R RS+F C CQ Sbjct: 286 RDEFMNRSSFSCPVCQ 301 >gi|299535475|ref|ZP_07048797.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] gi|298729236|gb|EFI69789.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] Length = 290 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 91/306 (29%), Positives = 144/306 (47%), Gaps = 35/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------------PHHFSAATRGK 48 MPELPEVE + + L ++ T+ + L + + F F P F + Sbjct: 1 MPELPEVEGVVQALKPTVEGRTIQQVKLSER-VHFSFSEGKQCIVKQAEPDAFESTLSQM 59 Query: 49 KIIDVSRRAKYLLIELEGN---LSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLT 104 I + RRAKY+ L + ++ HLGM+G+ F++ K +H H T + Sbjct: 60 TITRIERRAKYIFFHLLKDDVPYVLVSHLGMTGAWFVVNSPEEINEAKFQKHIHATFEMA 119 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK- 163 + +IY+D RRFG + + T ++ PL + PEP D ++T K Sbjct: 120 DGGY-----LIYSDIRRFGELRFLTTI--EEHAPLTKMAPEPFDEHACDFFITKSKLPKY 172 Query: 164 -NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 N +K +++ ++++G GNIY EAL+ K+ P RK L + L +EI Sbjct: 173 ENKAVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMSRLSEKRKR------ALFEEIV 226 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR++ Sbjct: 227 AVLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKVCPA---CETATSQMTIGGRTSV 283 Query: 283 YCTYCQ 288 YC CQ Sbjct: 284 YCPNCQ 289 >gi|227498716|ref|ZP_03928858.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] gi|226904170|gb|EEH90088.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] Length = 274 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + D+ L + + P F R + V RR KY Sbjct: 2 MPELPEVEQVRISLEPYVLEQKIEDVRILLPRMIVHPSPEGFRKGLRDAVVTAVLRRGKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L+G ++VHL M+G+F+ + K P + L+ Y + D Sbjct: 62 LSLMLKGGERLMVHLRMTGAFL----AVKKGESLPPFARWGLILSGA-----YDLWMTDI 112 Query: 120 RRFGFMDLVETSLKYQYPPL----RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 R FG +L + PL LGPEP D++ YL + K + +K +L+Q Sbjct: 113 RTFG-----TAALYQEGEPLDKGFEALGPEPLDDAMTGTYLKERARHKKTQVKPFILDQS 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I+AG+GNIY E+L+ A + P ++ + + +L I++V+ A+ G++ Sbjct: 168 IIAGLGNIYADESLFAAGIRPTKRVSRMTKKE------WERLAIAIKEVIQSALRHHGTT 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R+Y DG +G VY + G+PC CG+ + + AGR T YC +CQK Sbjct: 222 FRNYQDADGKMGDNFRYLKVYHRGGKPC-PLCGKTLTKTKVAGRGTVYCAHCQK 274 >gi|222151603|ref|YP_002560759.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] gi|222120728|dbj|BAH18063.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 157/319 (49%), Gaps = 59/319 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAA-----TRGKKII---- 51 MPELPEVE ++R + + + DI HFS A T+GK+ I Sbjct: 1 MPELPEVEHVKRGIEPQITGERIIDI-------------HFSDAVSNGKTQGKETIVKGL 47 Query: 52 ---------------DVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN 93 V RR+KY++ +L +GN ++ HLGM+G++ + + + N Sbjct: 48 SLDAFKERCIDTHIESVMRRSKYIIFKLKGKDGNRYMVGHLGMTGAYFVVPSIDDITVPN 107 Query: 94 -PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 +H HVT +L+++ +++Y+D RRFG + +++ S + T+ PEP Sbjct: 108 YKKHWHVTFTLSSSM-----KLVYSDIRRFGELRMLDESQFAHFDA--TIAPEPFSEEGR 160 Query: 153 AIYLT--HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 A Y++ H ++ +K ++ +V+G GNIY CEAL A ++P + L + T Sbjct: 161 AHYISALHLPKYQDKPIKQVIMLHSVVSGCGNIYACEALHNAGINPNITVKKLSEKRRT- 219 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 +LY + I VL + I GGS++ DY + G G QN F VYGK CG Sbjct: 220 --LLY---EHIVDVLNEGILYGGSTISDYRNAQGESGTMQNRFKVYGK---KICGTCGNE 271 Query: 271 IRRIVQAGRSTFYCTYCQK 289 I+ V A R+T YCT+CQK Sbjct: 272 IKTKVIATRNTHYCTHCQK 290 >gi|50365398|ref|YP_053823.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] gi|50363954|gb|AAT75939.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 137/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N T+ C K + + F + +KI+ VS KY Sbjct: 1 MPELPEVRTVAVFLNKRIVNTTILKAECFFEKMIWRNEVKDFYKSVLNQKILKVSNYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ EL N II HL M G + I I N H + L+N K Y D Sbjct: 61 LMFEL-SNQIIISHLRMEGKWSISKKEI--DIYNANHLRLQFELSNGEYLK-----YYDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG +++ + Q + LGPEP ++ + YL + K NS +K +L+Q ++ G Sbjct: 113 RKFGTIEIWDKKNYKQKSGMDKLGPEPLNSQPSFEYLKEKAIKSNSLIKAFILDQSVLCG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A ++P R T++L L K+I +L AI G+S+ Y Sbjct: 173 IGNIYANEILFAAGINPERITKTLTDEE------LKKIIMFSNAILEKAISLKGTSIHSY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ+ V+ + E C CG I + AGR T++C CQ Sbjct: 227 KSGDGETGQFQHELKVHLRKDEKCFV-CGTKILKKQVAGRGTYFCAKCQ 274 >gi|166365259|ref|YP_001657532.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] gi|166087632|dbj|BAG02340.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] Length = 285 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 137/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + ++ L R + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGQKIIGGEVLLQRTLAYPNCEATFLQGIAQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + PI H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPLPI----HTRLRFFFANQQELR-----FVD 111 Query: 119 PRRFG--FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + L+ LG EP D +F A YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTADYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P + +L++ D+L K I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHP-QTAANLLKIEQI--DLLTK---NIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + VYG+ GE C CG I RI +GRS +C CQ Sbjct: 226 SDFLHVTGVNGNYGAMAWVYGRNGENC-RLCGATIARIKLSGRSAHFCPQCQ 276 >gi|289450873|ref|YP_003475024.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185420|gb|ADC91845.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 280 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 146/298 (48%), Gaps = 30/298 (10%) Query: 1 MPELPEVEIIRRNLM-------MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDV 53 MPELPEVE IRR+L + +K + ++ +L R K+ + Sbjct: 1 MPELPEVENIRRSLAPHLLDEYLTLKQPFHPQVWINPGDL----------PCRDVKVTAI 50 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +RR KYL L+ NL ++ HL M+G F A P H HV +++++ + Sbjct: 51 NRRGKYLDFVLDSNLHLVAHLRMTGRFTYTE-DLASPCL--PHTHVIFAVSHSVGLPAHA 107 Query: 114 VI-YNDPRRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYL-THQFHKKNSNLKNA 170 + Y+DPRRFG + L+ +T LK +LG EP F YL T ++ +K+ Sbjct: 108 ELRYSDPRRFGRLILLNDTELKSYKFGYNSLGAEPLSPDFTPAYLLTAASKHPHAKIKSF 167 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AG+GNIY E L+ +L P S+ + +++ E ++L +I Sbjct: 168 LLDQTVIAGLGNIYADEILYACRLHPCIPVGSISEAAWE------QVVNETIRLLSLSIA 221 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ RDY DG G FQ+ VYG+ G+ C C ++ +GRST YC CQ Sbjct: 222 NHGTTFRDYRDGDGKRGGFQSLLCVYGRAGQAC-PRCNGILATTRISGRSTVYCPQCQ 278 >gi|197118515|ref|YP_002138942.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197087875|gb|ACH39146.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 269 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + LR P G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAIRSAKLRTMVPQELPRLLVGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + + H+H + L ++ + ND R Sbjct: 61 IITCRQG-SLLLHLGMTGHLRLVPAGAGAGV----HDHFDLELESSLILR-----LNDVR 110 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + LK++ L+ +GPEP + YL + K + L+ L++ +VAG Sbjct: 111 RFGSIHFTSGDPLKHKL--LQGIGPEPLTDELTGPYLYRKSRGKKAPLQRFLMDSSVVAG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+R + P SL + + +L I+K L +I+AG + D+ Sbjct: 169 LGNIYAAETLFRCGMLPPTPAGSLSEADCD------RLCDCIKKTLAASIEAG--RVMDF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTFYC CQ Sbjct: 221 SVREEKLVYFPQQLFVYGREGLAC-RQCGSAIERGRLGNRSTFYCPRCQ 268 >gi|27468284|ref|NP_764921.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57867171|ref|YP_188826.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251811084|ref|ZP_04825557.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|293366363|ref|ZP_06613042.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315830|gb|AAO04965.1|AE016748_199 formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57637829|gb|AAW54617.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251805381|gb|EES58038.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|291319488|gb|EFE59855.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733766|gb|EGG70092.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU045] Length = 290 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 45/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + +K+ + + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELD---TFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I V RR+KY++ + + + ++ HLGM+G F + + I P +H V Sbjct: 58 GYVIKKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFV--VNNLDEISTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 L N K +++Y+D RRFG ++V YP L + PEP + YL Sbjct: 116 FDLDN-----KQKLVYSDIRRFGEIRNIVNFD---SYPSLLEIAPEPFEEVAFEHYLECL 167 Query: 160 FHKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 KK N +K +L+ +++AG GNIY CEAL+RA ++P + T SL + K + Y Sbjct: 168 TMKKYKNKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQE--RKSLFYY- 224 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 +++VL + I GG+S+ DY H DG G Q +VY + + C CG I V A Sbjct: 225 ---VREVLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIA 278 Query: 278 GRSTFYCTYCQK 289 GR++ +C CQ+ Sbjct: 279 GRNSHFCPNCQR 290 >gi|302542232|ref|ZP_07294574.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302459850|gb|EFL22943.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 286 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 26/282 (9%) Query: 18 MKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL-SIIVH 73 + TV ++ LH + +R F+A G++ V RR KYL + E +++ H Sbjct: 5 ISGRTVAEVQVLHPRAVRRHLGGAEDFAARLTGRRTGAVRRRGKYLWLPFEDTAEAVLAH 64 Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTKKYRVIYNDPRRFGFMDL---V 128 LGMSG +++ P P H+ I + ++ T+ + + D R FG + L V Sbjct: 65 LGMSGQLLVQ------PGHAPDEKHLRIRVRFADDVGTE---LRFVDQRTFGGLSLHGSV 115 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 L+ + + +P D +F+ ++ + +K ALL+Q +++G+GNIY EA Sbjct: 116 PGDLEGLPDAIAHIARDPLDPAFDEAAFHLALRRRRTTVKRALLDQSLISGVGNIYADEA 175 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIG 247 LWRA+L R T +L + +L+ ++ V+ A+ GG+S YV+++G G Sbjct: 176 LWRARLHYDRPTATLTRPRSA------ELLGHVRDVMSAALAVGGTSFDSLYVNVNGESG 229 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YF+ + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 230 YFERSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 270 >gi|255027263|ref|ZP_05299249.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-003] Length = 214 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 21/233 (9%) Query: 59 YLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +LL +L N +I+ HL M G F + E+ +K H H+ ++T + + Sbjct: 1 FLLFDLT-NCTILSHLRMEGKFRLMDENEEVSK------HTHIIFHFEDHTELR-----F 48 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+ Sbjct: 49 LDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKL 108 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E + AK+ P R SL + K+I ++ + + ++ +A+ GGS++ Sbjct: 109 VAGVGNIYADEICFEAKVRPERAANSL-----SDKEI-KRIFKATKSIMTEAVALGGSTV 162 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R YV+ G +G +QN VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 163 RTYVNSQGKLGQYQNKLKVYGKTDEPCVV-CGTPIEKIKLNGRGTHFCPNCQK 214 >gi|75907494|ref|YP_321790.1| formamidopyrimidine-DNA glycosylase [Anabaena variabilis ATCC 29413] gi|123610190|sp|Q3MDP1|FPG_ANAVT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75701219|gb|ABA20895.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anabaena variabilis ATCC 29413] Length = 277 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 142/301 (47%), Gaps = 38/301 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAA-----TRGKKIIDV 53 MPELPEVE +RR L + N +T D+ LHR H FS G I Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRT-----IAHPFSVGDFLNGITGDSISAW 55 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 RR KYLL + VHL M+G + + P H H + + + ++ R Sbjct: 56 HRRGKYLLASTTSAAWLGVHLRMTGQLLWLNQD------EPLHKHTRVRIFFE-DQQELR 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG M V + + + L L +P F YL ++ H + +K AL Sbjct: 109 FV--DQRTFGQMWWVSSGMAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTAL 166 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ----EIQKVLID 227 L+Q +VAG+GNIY EAL+++ + P ++ K I+ I +VL Sbjct: 167 LDQSVVAGLGNIYADEALFKSGVLP----------ETLCTEVQLKQIELLRTAIIQVLET 216 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I+AGG++ +++++ G G + VY + GEPC CG +I+RI GRS+ +C C Sbjct: 217 SIEAGGTTFSNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFCRQC 275 Query: 288 Q 288 Q Sbjct: 276 Q 276 >gi|242242955|ref|ZP_04797400.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|242233556|gb|EES35868.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|319401004|gb|EFV89223.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis FRI909] Length = 290 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 154/312 (49%), Gaps = 45/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----------HR----KNLRFDFPHHFSAATR 46 MPELPEVE ++R + ++K+ + + HR K + D F T Sbjct: 1 MPELPEVEHVKRGIEPLIKSAKIEKVTFAKNVINGKNNHRETIIKGMELD---TFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I V RR+KY++ + + + ++ HLGM+G F + + I P +H V Sbjct: 58 GYVIKKVERRSKYIIFYIAYHDEDRILVSHLGMAGGFFV--VNNLDEISTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 L N+ +++Y+D RRFG ++V YP L + PEP + YL Sbjct: 116 FDLDNDQ-----KLVYSDIRRFGEIRNIVNFD---SYPSLLEIAPEPFEEVAFEHYLECL 167 Query: 160 FHKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 KK N +K +L+ +++AG GNIY CEAL+RA ++P + T SL + K + Y Sbjct: 168 TLKKYKNKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQE--RKSLFYY- 224 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 +++VL + I GG+S+ DY H DG G Q +VY + + C CG I V A Sbjct: 225 ---VREVLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIA 278 Query: 278 GRSTFYCTYCQK 289 GR++ +C CQ+ Sbjct: 279 GRNSHFCPNCQR 290 >gi|329930846|ref|ZP_08284245.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328934548|gb|EGG31053.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 272 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 25/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPE+E RR L + N+ +TD+ ++R+ N+ D F++A +G K+I V RR Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTID---EFTSALKGSKVIFVERRG 57 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L+ L +++HL + G + +P ++ Q V I+ + +V+Y Sbjct: 58 KHLIFHLHNGGRLLLHLMLGGILYLGRRDEERPSRSTQ---VEITFGD-------QVLYF 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R G++ + + + L+ LGPE D K+ LK L+NQ++V Sbjct: 108 IGLRLGYLHFL--TARETENALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVV 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E + A++ P+ K + L P++ L +L K++ +A D GG Sbjct: 166 AGIGNCYADEIAFDARIHPLSKIQDL------PEESLEQLYDSAVKLMHEATDGGGYMEM 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 220 PFQEGDELTGAYNDECKVYDRGGEPCV-RCGTPIVKAEHASRKIFFCPNCQ 269 >gi|307700916|ref|ZP_07637941.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] gi|307613911|gb|EFN93155.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] Length = 306 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 147/309 (47%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATR---GKKIIDVSR 55 MPELPEVE IRRNL + N VT + H ++LRF P FS GK++ VSR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQ-PGGFSRFHELLVGKRLESVSR 63 Query: 56 RAKYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R K+L +EL GN + HLGMSG + A I H + +L N + Sbjct: 64 RGKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LEL 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--------------DNSFNAIYLTHQF 160 ++ D R FG ++ P +G E A D + + ++ + Sbjct: 115 VFCDQRTFGHTEVRALEPTTDGAP-GGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRL 173 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +K LL+Q V+GIGNIY E L+ A + P R+L + L L++ Sbjct: 174 RSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGED------LRNLLEV 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHID--GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 V+ A++ GG+S D +++D G+ G F + VYG+ G+ C CGQ + +IV G Sbjct: 228 AASVMRHALEFGGTSF-DQLYVDSWGNPGDFASELLVYGRGGQAC-HQCGQALDKIVLDG 285 Query: 279 RSTFYCTYC 287 R+T +C +C Sbjct: 286 RATVFCAHC 294 >gi|329737415|gb|EGG73669.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU028] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 151/312 (48%), Gaps = 45/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + +K+ + + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELD---TFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I V RR KY++ + + + ++ HLGM+G F + + I P +H V Sbjct: 58 GYVIKKVERRGKYIIFYIADHDDDRILVSHLGMAGGFFV--VNNLDEISTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 L N K +++Y+D RRFG ++V YP L + PEP + YL Sbjct: 116 FDLDN-----KQKLVYSDIRRFGEIRNIVNFD---SYPSLLEIAPEPFEEVAFEHYLECL 167 Query: 160 FHKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 KK N +K +L+ +++AG GNIY CEAL+RA ++P + T SL + K + Y Sbjct: 168 TMKKYKNKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQE--RKSLFYY- 224 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 +++VL + I GG+S+ DY H DG G Q +VY + + C CG I V A Sbjct: 225 ---VREVLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIA 278 Query: 278 GRSTFYCTYCQK 289 GR++ +C CQ+ Sbjct: 279 GRNSHFCPNCQR 290 >gi|223044143|ref|ZP_03614182.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] gi|222442537|gb|EEE48643.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 146/311 (46%), Gaps = 43/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELD---SFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I +V RR+KY++ +E + +I HLGM+G F + + I P +H V Sbjct: 58 GYVISEVLRRSKYIVFHIEKDNDHRILISHLGMAGGFFV--VDDLEEIGTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L N +++Y+D RRFG ++ + YPP + PEP D YL+ Sbjct: 116 FELNNGK-----KLVYSDIRRFG--EIRNIANYESYPPFLEIAPEPFDKEAMIHYLSCFD 168 Query: 161 HKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K +N +K +L+ K++AG GNIY CEAL+R + P + SL K++L+ + Sbjct: 169 INKYANKPIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQ---KEMLFYYV 225 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 +E VL + I GG+S+ DY H DG G Q +VY + CG I V A Sbjct: 226 RE---VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYKQK---YCKTCGHEIETKVIAT 279 Query: 279 RSTFYCTYCQK 289 R++ +C CQK Sbjct: 280 RNSHFCPNCQK 290 >gi|329724651|gb|EGG61157.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU144] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 45/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + +K+ + + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELD---TFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I V RR+KY++ + + + ++ HLGM+G F + + I P +H V Sbjct: 58 GYVINKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFV--VNNLDEISTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 L N K +++Y+D RRFG ++V YP L + PEP + YL Sbjct: 116 FDLDN-----KQKLVYSDIRRFGEIRNIVNFD---SYPSLLEIAPEPFEEVAFEHYLECL 167 Query: 160 FHKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 KK N +K +L+ +++AG GNIY CEAL+RA ++P + T SL + K + Y Sbjct: 168 TMKKYKNKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQE--RKSLFYY- 224 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 +++VL + I GG+S+ DY H DG G Q +VY + + C CG I V A Sbjct: 225 ---VREVLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIA 278 Query: 278 GRSTFYCTYCQK 289 GR++ +C CQ+ Sbjct: 279 GRNSHFCPNCQR 290 >gi|269978188|ref|ZP_06185138.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933697|gb|EEZ90281.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 306 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 147/309 (47%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATR---GKKIIDVSR 55 MPELPEVE IRRNL + N VT + H ++LRF P FS GK++ VSR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQ-PGGFSRFHELLVGKRLESVSR 63 Query: 56 RAKYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R K+L +EL GN + HLGMSG + A I H + +L N + Sbjct: 64 RGKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LEL 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--------------DNSFNAIYLTHQF 160 ++ D R FG ++ P +G E A D + + ++ + Sbjct: 115 VFCDQRTFGHTEVRALEPTTDGAP-GGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRL 173 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +K LL+Q V+GIGNIY E L+ A + P ++L + L L++ Sbjct: 174 RSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGED------LRNLLEV 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHID--GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 V+ A++ GG+S D +++D G+ G F + VYG+ G+ C CGQ + +IV G Sbjct: 228 AASVMRHALEFGGTSF-DQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDG 285 Query: 279 RSTFYCTYC 287 R+T +C +C Sbjct: 286 RATVFCAHC 294 >gi|327439257|dbj|BAK15622.1| formamidopyrimidine-DNA glycosylase [Solibacillus silvestris StLB046] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/311 (29%), Positives = 156/311 (50%), Gaps = 43/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE + R+L +++ T+ + L KN + P F R Sbjct: 1 MPELPEVEGVVRDLRPIVEGKTIKSVSLSDVVYTSHEAGKQAIVKNAK---PSQFELLVR 57 Query: 47 GKKIIDVSRRAKYLLIELEGN---LSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTIS 102 KI + RR+KY+ L+ + ++ HLGMSG+ F++ K +H H + Sbjct: 58 DMKIDKLERRSKYIFFHLKKDDERFILVNHLGMSGAWFVVTDVLEITEEKFRKHIHAIFT 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH---- 158 L + ++Y D RRFG + ++ +PPL + PEP D ++ Sbjct: 118 LASGE-----LLVYADIRRFGELRFIKEIA--DHPPLLKMAPEPFDEIACDFFIMQSEKP 170 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 +F KK+ +K +++ ++++G GNIY EAL++ + P + T L + T +L+++I Sbjct: 171 KFAKKS--IKEVIMDGQVISGCGNIYATEALFKMLIHPGKATNELSREQKT---MLFRVI 225 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + VL ++ID+GGS++ DY I+G G Q+ +YGK + C+ C +V AG Sbjct: 226 CD---VLQESIDSGGSTISDYRSINGGAGTMQHRLKMYGK--KQCVV-CETNTESLVIAG 279 Query: 279 RSTFYCTYCQK 289 R++ YC CQK Sbjct: 280 RTSTYCPQCQK 290 >gi|17231812|ref|NP_488360.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] gi|24211709|sp|Q8YP80|FPG_ANASP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17133456|dbj|BAB76019.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] Length = 283 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 145/304 (47%), Gaps = 38/304 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAA-----TRGKKIIDV 53 MPELPEVE +RR L + N +T D+ LHR H FS G I Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRT-----IAHPFSVGDFLNGITGSTISTW 55 Query: 54 SRRAKYLLIELEGNLSII------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 RR KYLL EL + S VHL M+G + + P H H + + Sbjct: 56 HRRGKYLLAELSASPSTTSIPWLGVHLRMTGQLLWLNQD------EPLHKHTRVRIFFE- 108 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++ + + D R FG M V + + L L +P F YL ++ H + Sbjct: 109 --EEQELRFVDQRTFGQMWWVPPGIAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRR 166 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ-EIQKV 224 +K ALL+Q +VAG+GNIY EAL+++ + P + K I KL++ I +V Sbjct: 167 PIKTALLDQSVVAGLGNIYADEALFKSGVLP-----ETLCTEVQLKQI--KLLRTAIIQV 219 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +I+AGG++ +++++ G G + VY + GEPC CG +I+RI GRS+ +C Sbjct: 220 LETSIEAGGTTFSNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFC 278 Query: 285 TYCQ 288 CQ Sbjct: 279 RQCQ 282 >gi|126642855|ref|YP_001085839.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 208 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 19/219 (8%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPRRFG ++ Sbjct: 1 MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPRRFGC--ILW 48 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+GNIY E+L Sbjct: 49 LNPETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESL 108 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 + + P + L + KL+ EI+++L AID GGS+LRDY + G GYF Sbjct: 109 FNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYF 162 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 QQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 200 >gi|116671046|ref|YP_831979.1| formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116611155|gb|ABK03879.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 326 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 157/331 (47%), Gaps = 56/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+T + L +++R F+ G +++DV RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTITSVDVLDPRSIRRHALGAQDFTGNLEGSRVLDVVRRG 60 Query: 58 KYLLIELEG-------------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 K+L + LE ++++ HLGMSG +++ + P H Sbjct: 61 KFLWLPLEEAAAVQPGTDGIPAAGTSRPRVALMAHLGMSGQLLMQDSVV------PDEKH 114 Query: 99 VTISLT-NNTNTKKYRVIYNDPRRFGFM--------------DLVETSLKYQYPPLRTLG 143 + + L + + ++ + D R FG + L E + + Sbjct: 115 LKVRLRLSPAHGMPEQLRFVDQRIFGGLFVTSLVPTADGGPGGLGEVPEPFIAEEASHIA 174 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 +P D F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T +L Sbjct: 175 RDPLDPYFSFDSFYRRLRSRKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTETL 234 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 + + +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ + Sbjct: 235 RRADA------LRVLDAAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGRENQE 288 Query: 263 CLSNCG-----QMIRRIVQAGRSTFYCTYCQ 288 C C +++R RS++ C CQ Sbjct: 289 C-KRCAAAGIVSLMKREQFMNRSSYTCPVCQ 318 >gi|264676954|ref|YP_003276860.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] gi|262207466|gb|ACY31564.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] Length = 279 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 29/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L K LR+ A G+ ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEKATLG-KPLRWPL-GLLPQALVGRVVLGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS H+H + T + + +DPR Sbjct: 59 LLDLS-EGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 RFG + D++ L L LG EP + F S +K LL+ Sbjct: 112 RFGAVIYVPDEGDVLARKL------LDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLS 165 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +V G+GNIY E L+ +++ P R + + +LY + I+ VL A++ GG Sbjct: 166 GSVVVGVGNIYASEVLFLSRIHPTTPARDVGRRK---VKVLY---EAIRSVLALAVEKGG 219 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD+ +G G+FQ VYG+ G PC S+CG I+ + Q RST+YC CQK Sbjct: 220 TTLRDFSAANGMEGHFQLEAQVYGRDGLPC-SHCGAAIQLMRQGQRSTYYCARCQK 274 >gi|330723666|gb|AEC46036.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycoplasma hyorhinis MCLD] Length = 278 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L++ K L+ +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTVEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL ++G + ++S +P HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRLNGKYFFNNSSKKEP-----HNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + S ++ ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPMEISEEELF--NKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ-KVLIDAIDAGGSSLRD 238 +GNIYV E L+ + P+ K + +N KLI++ +L+ +I+ GGS++ Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE-------LKLIKKFATSILLKSIELGGSTINS 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 222 YSSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|212703530|ref|ZP_03311658.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] gi|212673030|gb|EEB33513.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] Length = 286 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 33/301 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATR---GKKIIDVSRR 56 MPELPEVE + R L V D C+ R ++ R H S G +I V RR Sbjct: 5 MPELPEVETVVRTL-----RPQVLDCCIERVDVFRERSLHPLSLPVERLAGTRISAVRRR 59 Query: 57 AKYLLIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K L+ELE + + VHL M+G F++ H A P+K H + L Sbjct: 60 GKLALLELEPPAAAAAVPVPSLLAVHLRMTGRFMV-HPEGAAPLK---HTRIIFHL-RRL 114 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + ++ ++D R FG + L ++ +LGPEP + L + H + + + Sbjct: 115 DGIRAQLFFDDVRSFGLVFAATPELLDRWDFWCSLGPEPLE--LGPGELGPRLHGRRA-I 171 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q ++AGIGNIY E+L+RA + P R L + +L +Q+VL + Sbjct: 172 KAALLDQTVLAGIGNIYADESLFRAGIDPRRPAGELSEAEAE------RLRIALQEVLRE 225 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I GSS+RDY +G++G FQN F VYG+ G+ C CG + + GR+T +C C Sbjct: 226 SIAQCGSSIRDYRDANGNVGAFQNTFFVYGRGGQAC-RRCGTELEKSRIGGRATVFCPQC 284 Query: 288 Q 288 Q Sbjct: 285 Q 285 >gi|314933843|ref|ZP_07841208.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] gi|313653993|gb|EFS17750.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] Length = 290 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 145/311 (46%), Gaps = 43/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK--------------NLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F T Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELD---SFKKLTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVT 100 G I +V RR+KY++ +E + +I HLGM+G F + K I P +H V Sbjct: 58 GYVISEVLRRSKYIVFHIEKDNDRRILISHLGMAGGFFV--VDDLKEIGTPNYRKHWQVI 115 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L N +++Y+D RRFG ++ + YP + PEP D YL+ Sbjct: 116 FELNNGK-----KLVYSDIRRFG--EIRNIANYESYPLFLEIAPEPFDKEAMIHYLSCFD 168 Query: 161 HKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K +N +K +L+ K++AG GNIY CEAL+R + P + SL K++L+ + Sbjct: 169 INKYANKPIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQ---KEMLFYYV 225 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 QE VL + I GG+S+ DY H DG G Q +VY + CG I V A Sbjct: 226 QE---VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQKYCKTCGHEIETKVIAT 279 Query: 279 RSTFYCTYCQK 289 R++ +C CQK Sbjct: 280 RNSHFCPNCQK 290 >gi|251772775|gb|EES53337.1| Formamidopyrimidine DNA-glycosylase [Leptospirillum ferrodiazotrophum] Length = 279 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ V + I R+++ G +I+ RR K L Sbjct: 1 MPELPEVETTRRAILPVFTGRRIASITPLREDIWATGRRPPRGPFTGGEIV---RRGKTL 57 Query: 61 LIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + L + ++ GMSG + H ++P H H+ + + Sbjct: 58 IFSLIPDKADRSSPPIFLLSRFGMSGRWDRRHQG-SRPAP---HTHLELLIPEEGVI--- 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + ++DPRRFG +++ + + + L GP+ S + L F + L+ AL Sbjct: 111 -LAWSDPRRFGRLEISPSPDESRL--LAGTGPD--ALSLDGPSLFEIFRPLATPLRKALT 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 N ++AGIGNIY+ E L+ A LSP R SL +L Q + ++L AID+G Sbjct: 166 NPALLAGIGNIYMAEILFDAGLSPFRPAGSLSLAEAC------RLSQSLHRILSSAIDSG 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS++ Y DGS G +Q +VYG+ G PC CG ++R RS +YC CQ Sbjct: 220 GSTIHSYRQEDGSPGGYQKFHAVYGREGSPC-RRCGLPLQRTTVEARSLYYCALCQ 274 >gi|299531517|ref|ZP_07044923.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] gi|298720480|gb|EFI61431.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] Length = 279 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 29/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L K LR+ A G+ ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRIAGARIEKATLG-KPLRWPL-GLLPQALVGRVVLGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L +++HLGMSGS H+H + T + + +DPR Sbjct: 59 LLDLS-EGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 RFG + D++ L L LG EP + F S +K LL+ Sbjct: 112 RFGAVIYVPDEGDVLARKL------LDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLS 165 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +V G+GNIY E L+ +++ P R + + +LY + I+ VL A++ GG Sbjct: 166 GSVVVGVGNIYASEVLFLSRIHPATPARDVGRRK---VKVLY---EAIRSVLALAVEKGG 219 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD+ +G G+FQ VYG+ G PC S+CG I+ + Q RST+YC CQK Sbjct: 220 TTLRDFSAANGMEGHFQLEAQVYGRDGLPC-SHCGAAIQLMRQGQRSTYYCARCQK 274 >gi|291320264|ref|YP_003515525.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] gi|290752596|emb|CBH40568.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] Length = 279 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N T+T++ + K ++ P+ F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKSNILNSTITNVIVKLDKLIKNATPNEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + + K +H+++ L N + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYFTDISIN----KTRKHDYIIFELDN-----QMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+SP KT N P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKISPWTKT------NKIPYEKFKEMLSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ +T PC + C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRTNMPC-NKCNALIQQEFIAQRMTYYCPICQK 272 >gi|184200694|ref|YP_001854901.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] gi|183580924|dbj|BAG29395.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] Length = 309 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 41/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR------FDFPHHFSAATRGKKIIDV 53 MPELPEVE++RR + + TV + ++LR DF + T + Sbjct: 1 MPELPEVEVVRRGVERWVVGRTVESVQVFDARSLRRHTAGVLDFQERLAGLT----VESA 56 Query: 54 SRRAKYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT--- 104 RR K+L + L + + +++VHLGMSG ++ S +P P+H + ++L+ Sbjct: 57 QRRGKFLWLPLRERTGSKPSQALLVHLGMSGQLLV--ASADQP--QPRHERIRLALSPAH 112 Query: 105 -NNTNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRT--LGPEPADNSFNAIYLTH 158 + + + D R FG M L ++ + P + +P D F+ Sbjct: 113 DDAGAALPEQARFVDQRIFGGMLLDPLAPSTDGHGTVPEHAAHIARDPLDPLFDVDAFHT 172 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 ++ + LK ALL+Q +++GIGNIY EALW AKL T ++ P+ +L+ Sbjct: 173 ALRRRRTGLKRALLDQGLISGIGNIYADEALWAAKLHWAAPTETMT----APR--TRELV 226 Query: 219 QEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC----LSNCGQMIRR 273 Q+V+ A++AGG+S YV+++G GYF + + YG+ G+PC + +I R Sbjct: 227 AACQEVMRRALEAGGTSFDSLYVNVNGESGYFSRSLNAYGRAGQPCPRCEAAGLDGVIVR 286 Query: 274 IVQAGRSTFYCTYCQK 289 A RS++ C+ CQ+ Sbjct: 287 EQFANRSSYRCSRCQR 302 >gi|315646600|ref|ZP_07899718.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315278243|gb|EFU41563.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 272 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPE+E RR L + N+ +T++ ++R+ + P F++ +G K+I V RR K+ Sbjct: 1 MPELPEMENYRRLLSQSIVNVPITNVVVNREK-SLNVPVDEFTSVLKGSKVIFVERRGKH 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L +++HL + G + +P P+ V I+ + +V+Y Sbjct: 60 LVFHLHNGGRLLLHLMLGGILYLGRIDEERP---PRSTQVEITFGD-------QVLYFIG 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G++ + + K L+ LGPE D K+ LK L+NQ++VAG Sbjct: 110 LRLGYLHFL--TAKEADDALKELGPELLDRRMTKARFVQLIGKRRGALKTTLVNQQVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + A++ P+ K + L + + L +L KV+ +A D GG + Sbjct: 168 IGNCYADEIAFDARIHPLTKIQDLSEQS------LEQLYDSTVKVMNEATDGGGYMEMPF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + R F+C +CQ Sbjct: 222 QEGDQLTGAYNDECKVYDREGEPCV-RCGTAIAKAEHTSRKVFFCPHCQ 269 >gi|220915420|ref|YP_002490724.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953274|gb|ACL63658.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 280 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ +P P+H + L + Sbjct: 61 KHLLVALERGGAPVGLLAHLGMTGKWVLRGAE--EPA--PRHARAWLRLDGGGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ + L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIDPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + L I ++ +DA D G Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAE---AKALAAAILASFRMTLDAED--GP 226 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQK 289 + YV G+ +N F VY + GEPC C + I R+VQA RSTF+C CQ+ Sbjct: 227 EI-TYVEEPGA----ENPFLVYAREGEPC-PRCRKGGRTSPIARVVQAQRSTFFCPRCQR 280 >gi|254994376|ref|ZP_05276566.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-064] Length = 212 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 20/225 (8%) Query: 67 NLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 N +I+ HL M G F + E +K H H+ ++T + + D R+FG Sbjct: 6 NCTILSHLRMEGKFRLMDEKEEVSK------HTHIIFHFEDHTELR-----FLDVRKFGT 54 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 M++ + + ++ LGPEP +F K + +K ALL+QK+VAG+GNIY Sbjct: 55 MEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIY 114 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E + AK+ P R SL + K+I ++ + + ++ +A+ GGS++R YV+ G Sbjct: 115 ADEICFEAKVRPERAANSL-----SDKEI-KRIFEATKSIMTEAVALGGSTVRTYVNSQG 168 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 169 KLGQYQDKLKVYGKTDEPCVV-CGKPIEKIKLNGRGTHFCPNCQK 212 >gi|261406219|ref|YP_003242460.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] gi|261282682|gb|ACX64653.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] Length = 273 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPE+E RR L + N+ +TD+ ++R+ N+ D F++A +G K+I V RR Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTID---EFTSALKGSKVIFVERRG 57 Query: 58 KYLLIELEGNLSIIVHLGMSG-SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L+ L +++HL + G ++ +P ++ Q V I+ + +V+Y Sbjct: 58 KHLIFHLHNGGRLLLHLMLGGILYLGRRDDEERPSRSTQ---VEITFGD-------QVLY 107 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R G++ + + + L+ LGPE D K+ LK L+NQ++ Sbjct: 108 FIGLRLGYLHFL--TARETENALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQV 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y E + A++ P+ K + L P++ L +L KV+ +A D GG Sbjct: 166 VAGIGNCYADEIAFDARIHPLSKIQDL------PEESLEQLYDSTVKVMHEATDGGGYME 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 220 MPFQEGDVLTGAYNDECKVYDREGEPCV-RCGTPIVKAEHASRKVFFCPNCQ 270 >gi|304373419|ref|YP_003856628.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] gi|304309610|gb|ADM22090.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] Length = 278 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L++ K L+ +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTIEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL M+G + ++S K HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRMNGKYFFNNSS-----KKELHNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + S ++ ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPMEISEEELF--NKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ-KVLIDAIDAGGSSLRD 238 +GNIYV E L+ + P+ K + +N KLI++ +L+ +I+ GGS++ Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE-------LKLIKKFATSILLKSIELGGSTINS 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 222 YSSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|39939160|ref|NP_950926.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] gi|39722269|dbj|BAD04759.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] Length = 276 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 136/301 (45%), Gaps = 46/301 (15%) Query: 1 MPELPEVEII-------RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDV 53 MPELPEV+II +V + + + K + I+D+ Sbjct: 1 MPELPEVQIIVDFLKKKLIGKKIVATKVFYETVVKNTKEFQ---------KIEQTTILDI 51 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVTISLTNNTNTKK 111 R+ K+LL L L +I HL M G I KP P+H H I L + ++ + Sbjct: 52 QRKGKFLLFFLTQELVLIGHLRMEGKLFI------KPCDEPKHKYEHFAIILEDKSSLR- 104 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 Y D R+FG ++ ++ L L +P + N L + K S LK L Sbjct: 105 ----YYDFRKFGRFEVKNQNIFLTQTTLHQLALDPFE--INPAVLYQKILKTKSALKKVL 158 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI----QKVLID 227 LNQKI++G+GNIYV E L+ KL P K L +QEI QKVL Sbjct: 159 LNQKIISGLGNIYVNEVLFLVKLHPETKACELSLEQ----------VQEIVTISQKVLTK 208 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI GG+++ + G IGYFQN V+GK +PC+ NC I +I GR T+ C C Sbjct: 209 AIKMGGTTVSTFESQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPVC 267 Query: 288 Q 288 Q Sbjct: 268 Q 268 >gi|293376465|ref|ZP_06622694.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325842052|ref|ZP_08167589.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] gi|292644887|gb|EFF62968.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325489774|gb|EGC92130.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] Length = 277 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 140/293 (47%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE ++ L +K + + +I L KN+ D F + I ++SRR Sbjct: 1 MPELPEVETVKNVLNSQIKGLRIKEIELRYEPMVKNMSADV---FKEKLTNQVIEEISRR 57 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL+ + + ++ HL M G + E A + +H H L N +++Y Sbjct: 58 GKYLVFHFQ-DYQLLSHLRMEGKYFYE----ADDFELNKHIHAIFKLDNGR-----QLLY 107 Query: 117 NDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R+FG L E + + LG EP + F Y+ + K +K+ LL+Q Sbjct: 108 QDTRKFGTFHLYEKGQDLEETSAFKVLGVEPFSDEFTPAYVKGKIKGKKKPIKSLLLDQS 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIYV E L+RAK+ P+ + L N + +++ +VL AI GG++ Sbjct: 168 VVCGLGNIYVDEVLFRAKIHPLTPSYELSDNE------IENVVKYTVEVLAKAISLGGTT 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +R + G G FQ V+ + GE C C I +I GR T++C CQ Sbjct: 222 IRTFTSTHGVSGTFQEELLVHQRLGEVC-KICETPIEKIKVGGRGTYFCPTCQ 273 >gi|186684064|ref|YP_001867260.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] gi|238689422|sp|B2J5G0|FPG_NOSP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|186466516|gb|ACC82317.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] Length = 291 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 145/308 (47%), Gaps = 49/308 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + N +T D+ L+R + + F F I RR Sbjct: 1 MPELPEVETVRKGLNQLTLNQEITGGDVLLNR-TIAYPFSVGEFVDGIEKNAIATWHRRG 59 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYLL EL S + VHL M+G + H P H H + R+ Sbjct: 60 KYLLAELSSPCSTSWLGVHLRMTGQLLWLHRD------EPLHKHTRV-----------RL 102 Query: 115 IYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQFHKKN 164 + D + F+D + PP L L +P F+ YL + + Sbjct: 103 FFGDQQELRFVDQRTFGKIWWVPPGVAVESIITGLAKLAADPFSPEFSVEYLASKLKNRR 162 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ----E 220 +K ALL+Q +VAG+GNIY EAL+++ + P +T + D+ K I+ Sbjct: 163 RPIKTALLDQSVVAGLGNIYADEALFKSGILP--ETLCI--------DLQLKQIELLRTA 212 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I +VL +I+AGG++ +++++ G+ G + VY + GEPC CG I+RI AGRS Sbjct: 213 IIQVLETSIEAGGTTFSNFLNVKGTNGNYGGVAWVYNRAGEPC-RVCGMPIQRIRLAGRS 271 Query: 281 TFYCTYCQ 288 + +C+ CQ Sbjct: 272 SHFCSECQ 279 >gi|284106932|ref|ZP_06386312.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] gi|283830005|gb|EFC34282.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] Length = 275 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E++RR + + T+ I + R ++ S G ++++V R K + Sbjct: 1 MPELPEAEVVRRQVQAAVVGSTIDRIWIGRDDIIRQGLESLSWYA-GARVVEVQRHGKSV 59 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ E G ++ LGM+G + S + + +H H+ + L N + V Y Sbjct: 60 VLICERDAGRRVVVAELGMTGLLLFARES----VPSEKHVHMIMRLANGPQPE---VWYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + RRFG + L++ + +Q R G +P + + +K LLNQ + Sbjct: 113 NARRFGRLYLLDQT-AWQAYRQRRFGCDPF--TMTEVEFVDVIKSCRGRIKAVLLNQHRI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ + P + L + + L +Q+VL +AI GGSS+R Sbjct: 170 AGIGNIYANEVLFRSGIHPHARGCRLSRRR------IRVLFDTMQRVLEEAIRLGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V DG+ G FQ+ VY K G C + CG I+ + RS+F C CQK Sbjct: 224 DFVAPDGTRGQFQDRHVVYQKKGAHCPNGCGTRIQCFMNE-RSSFVCPACQK 274 >gi|162447217|ref|YP_001620349.1| bifunctional formamidopyrimidine-DNA glycosylase/dephospho-CoA kinase [Acholeplasma laidlawii PG-8A] gi|161985324|gb|ABX80973.1| bipartite protein: formamidopyrimidine-DNA glycosylase and dephospho-CoA kinase domains [Acholeplasma laidlawii PG-8A] Length = 452 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRRNL V++ + ++ ++ + + + F +G++I V R AKYL Sbjct: 1 MPELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSN-DASFETKLKGQRIHKVEREAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L ++ HL M G + ++ P+ +H HV +L++ + + Y D R Sbjct: 60 KFILDDYL-LVSHLRMEGKYFMD-----APLN--KHIHVVFNLSSG-----HTLSYEDTR 106 Query: 121 RFGFMDLVETSLKYQY-PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG +LV+ K Y ++ L +P N Y + F++++ +K LL+Q I+ G Sbjct: 107 KFGRFELVDIKYKDTYLKDIKGLAKDPDTLDLNTFYSS--FNQRSKTIKEILLDQSIIGG 164 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P +K + KD L+ VL AI+ GG+++ + Sbjct: 165 IGNIYANEILYLSKIHPAKKGFLI------SKDEAKTLLNNSNLVLNKAIEMGGTTIDTF 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ +V+GKTGE C CG I + GR T+ C CQ Sbjct: 219 ESL-GHKGEFQQELNVHGKTGEIC-KVCGTKIIKFQLKGRGTYICPKCQ 265 >gi|327334307|gb|EGE76021.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 280 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQ------HAPQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|317051383|ref|YP_004112499.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] gi|316946467|gb|ADU65943.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] Length = 278 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + +L + T++D+ +++ P F G+ + + RRAK Sbjct: 1 MPELPEVQTLVDDLCHRALVGQTISDVQVTWPRSIASHTPADFRHQLTGQTLTAIRRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYN 117 YL++EL ++VHL M+G F + P+K H HV + L + + ++ Sbjct: 61 YLVMELSSGWGLLVHLRMTGKFDL-----CDPVKPRDIHEHVILCLGSGQELR-----FH 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG LV ++ L LG EP F L +N+ LK+ LL+Q V Sbjct: 111 DTRKFGRFSLVPDTVGA----LSHLGVEPLSPEFTPEVLGRLLAGRNTMLKSFLLDQTKV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY EAL+ A+L P R + + +I +Q+ L + + G+S Sbjct: 167 AGIGNIYADEALFEARLHPANPCRLVAAEQ--VASLHGAIIMVLQRGLRNMGTSLGTSKG 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + G G ++ V+ +TG PC + CG I RI+ RST +C CQ Sbjct: 225 NFYSVAGRPGRNEDELKVFRRTGTPCCA-CGTTIERIILIQRSTHFCPLCQ 274 >gi|257058047|ref|YP_003135935.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] gi|256588213|gb|ACU99099.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] Length = 282 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + D I L R F ++ RG + RR K Sbjct: 1 MPELPEVETVRRGLNQFTSGKIIEDAEILLTRSLAYPTSVDEFLSSIRGVSFGEWQRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L E + VHL M+G + + S P H + L N + Sbjct: 61 YLLGTLVKGSGEAAGWLGVHLRMTGQLLWVNQS------EPLQTHTRLRLFCGENQE--- 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V Q L+ LG EP + F+ Y T + + N+K L Sbjct: 112 LRFVDIRTFGKVWWVPPKETPQRVITGLKKLGVEPFSDEFSVDYFTTKLKGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY E L+++ + P + + N P+ I +L I +VL AI Sbjct: 172 LDQEIVAGLGNIYADEVLFKSGVHP-----TTLGKNLKPQQI-EQLRIAIIEVLETAIVH 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|307154764|ref|YP_003890148.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] gi|306984992|gb|ADN16873.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] Length = 277 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 28/296 (9%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE + R L + + + + ++ L R L + F F G I RR Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLSR-TLAYPFSIAEFWQGITGTSINRWQRRG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL +L+ + VHL M+G + + P+H + + + + + + Sbjct: 60 KYLLAQLDSGGGLGVHLRMTGQLLW----VKRETPYPKHTRLRLFVGQDQELR-----FV 110 Query: 118 DPRRFGFMDLVETSLKYQYPP-----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D R FG + + + Q P L+ LG EP N F+ YL + ++K+ LL Sbjct: 111 DIRTFGKIWYIPPN---QAPETIMTGLQKLGVEPFSNEFSREYLQQKLKNSRRSIKSVLL 167 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAGIGNIY EAL+++ + P SL TP+ L KL I VL +ID G Sbjct: 168 DQEVVAGIGNIYADEALFKSGIKPNAIACSL-----TPEQ-LEKLRLAICDVLQTSIDKG 221 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ D++ + G G + VYG+ G+ C CG +I R+ GRS +C CQ Sbjct: 222 GTTFSDFLSVTGVNGNYGGVAWVYGRGGKSC-RVCGTLIERVKLGGRSAHFCPKCQ 276 >gi|119964032|ref|YP_948195.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119950891|gb|ABM09802.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 320 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 60/330 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF------DFPHHFSAATRGKKIIDV 53 MPELPEVE++RR L ++ TVT + L +++R DF + AT ++DV Sbjct: 1 MPELPEVEVVRRGLARWVRGRTVTGVDVLDPRSIRRHALGTEDFIGNLEHAT----VLDV 56 Query: 54 SRRAKYLLIELEGN-------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 RR K+L + L + ++++ HLGMSG +++ + + +H V Sbjct: 57 VRRGKFLWMPLVMSGVSDTEPADELPKVALMAHLGMSGQLLMQDPV----VPDEKHLKVR 112 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFM--------------DLVETSLKYQYPPLRTLGPEP 146 ISL+ + ++ + D R FG + L ET L + +P Sbjct: 113 ISLSPADGMPE-QLRFVDQRIFGGLFVTALVPTVDGGPGGLGETPLPEIAEEASHIARDP 171 Query: 147 ADN--SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 D SF+A Y + + + LK ALL+Q +++GIGNIY EALWRA+L R T +L Sbjct: 172 LDPYFSFDAFY--RKVKGRKTGLKRALLDQGVISGIGNIYADEALWRARLHYARATDTLR 229 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 + + +L++ ++ V+ A+ AGG+S YV+++G GYF + + YG+ GE C Sbjct: 230 RADAE------RLVEAVKDVMNAALAAGGTSFDSLYVNVNGDSGYFARSLNAYGRAGELC 283 Query: 264 LSNCG-----QMIRRIVQAGRSTFYCTYCQ 288 C +++R RS++ C CQ Sbjct: 284 -GRCEAIGLHSVMKREQFMNRSSYTCPVCQ 312 >gi|320527461|ref|ZP_08028642.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] gi|320132174|gb|EFW24723.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] Length = 268 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 140/290 (48%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + D+ + + + F + + RR KYL Sbjct: 1 MPELPEVETVLRTLEHQIQGRKILDVDVRYSKMIENDIEQFKQQLKNQTFNTFMRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ + ++ HL M G + I+ + +P +H HV L N + Y D R Sbjct: 61 LFGLD-DCILMSHLRMEGRYYIQDPT--EPTN--RHMHVIFHLDNGKELR-----YMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 +FG M+++ L + LGPEP D +FNA Y+ H + K K + LK+ LL+Q VAG Sbjct: 111 KFGRMEIL--PLDTDFSHYHGLGPEPFDEAFNASYI-HAYRKGKRTPLKSLLLDQSFVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L L P R + + + L+ +++L AI AGG+++R Y Sbjct: 168 IGNIYADEILAACNLRPGRSCARITRKDEE------NLVMHTRRILKAAIAAGGTTIRTY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ +V+ + P C I GRS++YC +CQK Sbjct: 222 TSSLGVTGRFQTECTVHMQKICP---RCKGQIHVKYIGGRSSYYCPHCQK 268 >gi|330944159|gb|EGH46278.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 213 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 19/232 (8%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K L+I+ E ++I HLGMSG+ + + +H HV I L + + Y Sbjct: 1 KCLMIQAEVG-TLISHLGMSGNLRLVEAG----LPALKHEHVDIELESGLALR-----YT 50 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG M + + + + L LGPEP + F+ L + K+ +K +++ +V Sbjct: 51 DPRRFGAM--LWSLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVV 108 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LR Sbjct: 109 VGVGNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLR 162 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 163 DFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 213 >gi|293363949|ref|ZP_06610685.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] gi|292552439|gb|EFF41213.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] Length = 274 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ +L ++K +T + ++ K ++ +F + + I + KY Sbjct: 1 MPEYPEVTVVSNSLNELVKFKKITKVEVNLEKIIKNTDVKNFINSLENRVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +L +I HL M G F E+ + N +H+ V + +N+ ++IYND Sbjct: 61 IIFSFDNDLKMISHLRMEGKFFYENFLSDR---NKKHDLVIFTFEDNS-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG MDLV+ L + + L P N +A + + K +K LL+Q IV G Sbjct: 113 RRFGTMDLVQGDLS-TFTKISKLANLP--NPLDASKIMQKVKNKKIPIKTVLLDQSIVLG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVLIDAIDAGGSSLRD 238 IGNIY E L+ +K++P+ +++ +KLI Q + ++ + GGSS+ Sbjct: 170 IGNIYADEVLFASKINPLSPASNILLKE-------WKLILQNAKDIMNQSTKQGGSSVNT 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y ++ G FQN VY + CL C + +I GR T +C CQK Sbjct: 223 YGSVNNVQGTFQNELKVYNRATLACLR-CKNKLDKIKVNGRGTTFCAICQK 272 >gi|218245023|ref|YP_002370394.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] gi|226706478|sp|B7K1T1|FPG_CYAP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218165501|gb|ACK64238.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] Length = 282 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + D + L R F + RG + RR K Sbjct: 1 MPELPEVETVCRGLNELTSGKVIKDAEVLLPRSLASPSSVDEFLSNIRGVIFGEWQRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L E + VHL M+G + + S P H + L N K+ R Sbjct: 61 YLLGTLVKESGEAAGWLGVHLRMTGQLLWVNQS------EPLQIHTRLRLFCGEN-KELR 113 Query: 114 VIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG + V +T+ + L+ LG EP + F+ Y T + + + N+K L Sbjct: 114 FV--DIRTFGKVWCVPPKTTPETIITGLKKLGVEPFSDDFSDDYFTTKLNGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY EAL+++ + P + + N P+ I +L I +VL AI+ Sbjct: 172 LDQEIVAGLGNIYADEALFKSGVHP-----TTLGKNLKPQQI-EQLRIAIIEVLETAIEK 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|169835968|ref|ZP_02869156.1| formamidopyrimidine-DNA glycosylase [candidate division TM7 single-cell isolate TM7a] Length = 227 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/238 (32%), Positives = 122/238 (51%), Gaps = 24/238 (10%) Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV------ 114 +I+L N ++++HL M+G I IK H SL K RV Sbjct: 1 MIDLSTNYTLVIHLKMTGQIIYRGD-----IKFGA-GHPNDSLIGELPDKSTRVSFDFED 54 Query: 115 ----IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKN 169 +ND R+FG++ L+ + P ++ +GPEP D+ F H+F + KN+++K Sbjct: 55 GSKLFFNDQRKFGWIKLIPSLEVKNLPFMQKVGPEPLDDDFTVEDFIHRFERRKNTSIKA 114 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +VAG+GNIY E+LW AK+ P R+ + + D L E++ V+ +I Sbjct: 115 ALLDQTVVAGVGNIYADESLWGAKIDPRRRVKDITN------DEFKSLYNEVRYVMDLSI 168 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGS+ R+YV +G+ G + V+ + G+ C CG +I +I AGR T C C Sbjct: 169 KKGGSTDRNYVDAEGNKGSYLEFARVFRREGQAC-KRCGHIIEKIKHAGRGTHICPGC 225 >gi|284928877|ref|YP_003421399.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] gi|284809336|gb|ADB95041.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] Length = 284 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 35/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVS---R 55 MPELPEVE I R L + T+ + L R +P +D+ R Sbjct: 1 MPELPEVESICRKLNELTTGQTILGGQVLLARS---LAYPSSMQEFLNLIDNVDLKIWKR 57 Query: 56 RAKYLLIELEGNLSIIV-HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R KYLL EL+ N IV HL M+G ++ T ++P+ +H + + N+ Y + Sbjct: 58 RGKYLLAELDSNKGWIVFHLRMTGQLLL--TQQSEPLS--KHTRLRLFCKNS-----YEL 108 Query: 115 IYNDPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D R FG + ++ S Y P L+ LG EP N F+ YL + N+K Sbjct: 109 RFIDIRTFGKVWVIPPS----YNPEDIITGLKKLGVEPFSNDFSINYLIENLTRYKRNIK 164 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q I+AGIGNIY EAL+R+ + P K L T K I L + I +VL + Sbjct: 165 TILLDQSIIAGIGNIYADEALFRSNIHPETKGAEL-----TLKQI-KNLQKAILEVLSKS 218 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ID GG++ D+++I G+ G + VYG+ PC C I+RI GRS+ +C CQ Sbjct: 219 IDEGGTTFSDFLNITGNKGNYTEFAWVYGRNHSPC-RICSTPIKRIKLNGRSSHFCPKCQ 277 Query: 289 K 289 + Sbjct: 278 Q 278 >gi|317484387|ref|ZP_07943305.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] gi|316924362|gb|EFV45530.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] Length = 305 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 97/320 (30%), Positives = 145/320 (45%), Gaps = 59/320 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID-----VSR 55 MPELPEVE I R L ++ + L P F K++ R Sbjct: 11 MPELPEVETIARTLAPQVEGRRIVACELLN-------PSTFEGTIPLGKVVGGVIGRPGR 63 Query: 56 RAKYLLIEL---------------EGNLS------------IIVHLGMSGSFIIEHTSCA 88 R K LL+ L G+L+ + HL M+G + Sbjct: 64 RGKLLLLPLAFGSDPLPPVDEACPSGSLARCLACGDERITGLGFHLKMTGRLFV------ 117 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD 148 P P H + + + R+ ++D R+FG++ ++ S +P +LGPEP + Sbjct: 118 YPAGTPPEKHTRLLFDLDDGS---RLFFDDTRKFGYVRVLSPSSVSCWPFWNSLGPEPLE 174 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 +A F + +K LL+Q ++AG GNIY E+L+RA + P + S Sbjct: 175 --MDADAFAACFAGRRGKIKALLLDQSVLAGCGNIYADESLFRAGIRPDAQLVS------ 226 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 D L +L +++VL+++IDA GSS+RDY G G FQNAF VYG++GE CL CG Sbjct: 227 --ADRLKRLHAALREVLLESIDACGSSIRDYRTARGDAGAFQNAFRVYGRSGETCL-ECG 283 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 + AGR+T +C CQ Sbjct: 284 TPLESCRIAGRATVFCPNCQ 303 >gi|330685708|gb|EGG97347.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU121] Length = 290 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 144/309 (46%), Gaps = 39/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + N T+ I K + + F T Sbjct: 1 MPELPEVEHVKRGIEPFAVNTTINKITFSENVKKGKEDGRETIIKGMTLE---SFRRLTE 57 Query: 47 GKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS 102 G I + RR+KY++ + + +I HLGM+G F ++ H +H V Sbjct: 58 GYTINQIERRSKYIVFYINRDAEQRILISHLGMAGGFFVVNHLEEINVPNYRKHWQVIFE 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQF 160 L N ++IY+D RRFG ++ S YP ++ PEP D +L T++ Sbjct: 118 LDNGK-----KLIYSDIRRFG--EIRNVSSFDSYPSFLSIAPEPFDEEALQHFLDCTNKK 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K +L+ K+++G GNIY CEAL+RA + P R T+ L +N + + Y Sbjct: 171 NYSKKPIKQVILDHKVISGCGNIYACEALFRAGILPNRLTQEL--SNQEKEMVFY----H 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 ++ VL + I GG+S+ DY H DG G Q +VY + CG I V A R+ Sbjct: 225 VRSVLNEGIKYGGTSISDYRHADGKTGEMQLHLNVY---KQKYCKVCGHSIETQVIASRN 281 Query: 281 TFYCTYCQK 289 + YC CQK Sbjct: 282 SHYCPTCQK 290 >gi|282898822|ref|ZP_06306809.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] gi|281196349|gb|EFA71259.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] Length = 277 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + + +T ++ L R + + F F +G I R Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITSGEVLLAR-TVAYPFAADQFIGGLKGSTIESWIRCG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL EL + + VHL M+G + + P H H + L K+ + + Sbjct: 60 KYLLAELSSSAWLGVHLRMTGQLLWLSQ------EEPLHKHTRVRLFFG---KEQELRFV 110 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + + + + L L +P F YL + K +K ALL+Q Sbjct: 111 DQRTFGKMWYIPSGVVREKIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQS 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P ++ +N + L I +VL +I AGG++ Sbjct: 171 IVAGLGNIYADEALFKSGILPTTICTNIGENQ------IRSLRMAIIEVLSASIAAGGTT 224 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 225 FSNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|309807139|ref|ZP_07701116.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] gi|308166490|gb|EFO68692.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] Length = 197 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 9/197 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPI 197 GNIY E LW++K+ P+ Sbjct: 172 GNIYTDEVLWQSKIHPL 188 >gi|282891369|ref|ZP_06299871.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498866|gb|EFB41183.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 275 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R + ++ T+ + + P FS G+KI+++SRR K Sbjct: 1 MPELPEVETITREMREAKLEGRTIEKAQIFWERTIATPSPSIFSKKIVGQKILNISRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YN 117 ++++ L S+++HL M+G F+I + IK H V + L + R++ Y Sbjct: 61 FIILTLSKE-SLLIHLRMTGKFLI----AKEQIKPDSHERVRLFLDDG------RILRYE 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R+FG LV+ + L LG EP +F + +K LL+Q + Sbjct: 110 DQRKFGKWYLVKNPDEV----LGALGIEPLSENFTLSTFQKILTGHHRQIKPFLLDQHYI 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GNIYV EALW +K+ P+R +L T K+I L + I VL I G+SL Sbjct: 166 AGLGNIYVDEALWVSKIHPLRSVSTL-----TKKEI-KALHEAIPIVLQTGIKNIGTSLG 219 Query: 237 ---RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +Y + G G QNA +V+ K G PC C I+++ R T YC CQ Sbjct: 220 AARANYFSVSGRRGSNQNALNVFRKDGLPC-PRCNTTIKKMTVGQRGTHYCPVCQ 273 >gi|213418642|ref|ZP_03351708.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 250 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 135/273 (49%), Gaps = 23/273 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDFC 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 GS + G S G +RR Sbjct: 222 KAMGSRAILPRSCRCTGAKA----SRVGYAVRR 250 >gi|241764080|ref|ZP_04762118.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] gi|241366611|gb|EER61092.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] Length = 271 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 145/296 (48%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+L V+ + + L K LR+ S G+ ++ + RR KYL Sbjct: 1 MPELPEVEVTRRSLAEVITGARIEAVRLG-KPLRWPLGCAPSILV-GQHMVALRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ MSGS + H+HV + T K + +DPR Sbjct: 59 LIDLDKGLLLLHLG-MSGSLRFIRDQAPPGV----HDHVDLV------TSKGVLRLHDPR 107 Query: 121 RFGFM-------DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 RFG + D V L L LG EP +F L + +K LL Sbjct: 108 RFGALVYAANEDDAVAQKL------LGGLGMEPLSETFTEAALLAGLKASRAPVKQVLLA 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++V G+GNIY EAL+ A + P + N +L I+ VL A++ GG Sbjct: 162 GRLVVGVGNIYASEALFLAGIRPT------VAGNLIGPIRARRLHAAIKTVLARAVELGG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+LRD+ + DG G+FQ+ +VYG+ G PC CG+ ++ I Q RS+++C CQ+ Sbjct: 216 STLRDFSNADGMAGHFQHEANVYGRAGAPC-HRCGRAVQMIRQGQRSSYFCPGCQR 270 >gi|159902905|ref|YP_001550249.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9211] gi|238687193|sp|A9BDY5|FPG_PROM4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159888081|gb|ABX08295.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9211] Length = 286 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 151/313 (48%), Gaps = 53/313 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD-----FPHHFSAATRGKKIIDVS 54 MPELPEVE +R+ L +KN + ++ L +++ + F + G+ S Sbjct: 1 MPELPEVETVRKGLEKRLKNFYIDNVEVLSERSIASNGGSNVFIFNLKDLVFGR----WS 56 Query: 55 RRAKYLLIEL--EGNL-------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 RR KYL+ L E +L +++VHL M+G F H + P H V Sbjct: 57 RRGKYLIASLCKESDLIEEIPSGTLVVHLRMTGYFEW-HQNTKAPC---THTRVRF---- 108 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIY 155 N K + + D R FG M + PP L+ LGPEP FN Y Sbjct: 109 -WNKKGSEIRFIDIRNFGQM--------WWIPPNKLPSEVINGLKNLGPEPFSKDFNPEY 159 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 L + + ++K++LL+Q I+AG+GNIY E+L+ A ++PI+ + L NG L Sbjct: 160 LKYCLKGRKRSIKSSLLDQSILAGVGNIYADESLFEAGITPIKASGDL---NGCE---LK 213 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 KL + + ++L +I GG++ D+ ++G G + VY + +PC CG +I + Sbjct: 214 KLCKSLTRILKASIGKGGTTFSDFRDLEGLNGTYGGYAWVYRRNQKPC-RKCGTLIEKTK 272 Query: 276 QAGRSTFYCTYCQ 288 AGRST +C CQ Sbjct: 273 VAGRSTHWCPNCQ 285 >gi|315656592|ref|ZP_07909479.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492547|gb|EFU82151.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 321 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 144/326 (44%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPH--HFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIE--------HTSCAKPIKNPQHNHVTI 101 K+L L +G L++++HLGMSG +E + A P PQH+ T Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQGAPQHSRETR 120 Query: 102 SLTNN----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---------AD 148 L + T + +++ D R FG ++L P PEP A Sbjct: 121 LLPHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEHIAR 180 Query: 149 NSFNAIYLTHQF----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + + T F H +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPC 263 L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ G+ C Sbjct: 241 DRK------LRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|126651390|ref|ZP_01723597.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] gi|126591919|gb|EAZ86002.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] Length = 290 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 143/309 (46%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------------PHHFSAATRGK 48 MPELPEVE + + L ++ T+ + L + + F F P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSER-VHFSFSEGKQCIVKQAEPDAFELTLSEM 59 Query: 49 KIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLT 104 I + RRAKY+ L E ++ HLGM+G+ F++ K +H H T + Sbjct: 60 TITKIERRAKYIFFHLFKDEVPYVLVSHLGMTGAWFVVNSPEDIDEAKFQKHIHATFKMA 119 Query: 105 NNTNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +IY+D RRFG F+ +E + PL + PEP D ++T Sbjct: 120 DGGY-----LIYSDIRRFGELRFLAKIEDHV-----PLTKMAPEPFDELACDFFITKSTL 169 Query: 162 KK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K N +K +++ ++V+G GNIY EAL+ K+ P RK + + L + Sbjct: 170 PKYENKAVKEVIMDGQVVSGCGNIYATEALFAQKIHPARKMNRISEKRKRA------LFE 223 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 EI VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR Sbjct: 224 EIVAVLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKICPA---CETATSQMTIGGR 280 Query: 280 STFYCTYCQ 288 ++ +C CQ Sbjct: 281 TSVFCPNCQ 289 >gi|121607944|ref|YP_995751.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] gi|121552584|gb|ABM56733.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] Length = 273 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 93/296 (31%), Positives = 144/296 (48%), Gaps = 31/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + + L K LR+ + G++++ + RR KYL Sbjct: 1 MPELPEVEVTRRSFADAIAGARIQAVALG-KPLRWPLGCD-PMSLVGQQVLGLRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L ++ MSGS H P H L + T + +DPR Sbjct: 59 LADTSGGLLLLHLG-MSGSLRFSHG------LPPAGVHDHFDLVTDRGTLRL----HDPR 107 Query: 121 RFGFM-----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RFG + + +LK L LG EP +SF+ K +K LL + Sbjct: 108 RFGAVVYAPDEQAPVALKL----LGALGMEPLSDSFSLATFQSGLKKSRMPIKPLLLAGR 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E L+ A + P ++ G + + +L + I+ VL A+ GGS+ Sbjct: 164 LVVGVGNIYASEVLFLAGIRPT----AVASRVGAER--VRRLHEAIRTVLTRAVQMGGST 217 Query: 236 LRDYVHIDGSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LR++ + DG G+FQ++ VYG+ G PC +CG IR + Q RS+++C CQ+ Sbjct: 218 LRNFSNADGMAGHFQSSAHIHVYGRDGAPC-HHCGSAIRLLRQGQRSSYFCPLCQR 272 >gi|225629675|ref|ZP_03787657.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591470|gb|EEH12528.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 159 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 7/147 (4%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 G EP + F+ YL K N+K+AL++ K + G+GNIY E+L+RA++SP+R + Sbjct: 19 FGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGVGNIYASESLFRARISPLRSAK 78 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 +L KL EI+ L DAI AGGS+L+DY GS GYFQN F VYGK + Sbjct: 79 NLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSAGYFQNNFYVYGKVQK 132 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC C +I I Q GRST++C CQ Sbjct: 133 PC-KICNNIITLIRQNGRSTYFCNACQ 158 >gi|169829548|ref|YP_001699706.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] gi|168994036|gb|ACA41576.1| Formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] Length = 290 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 144/309 (46%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------------PHHFSAATRGK 48 MPELPEVE + + L ++ T+ + L + + F F P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSER-VHFSFSEGKQCIVKQAEPDAFELTLSEM 59 Query: 49 KIIDVSRRAKYLLIEL---EGNLSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLT 104 I + RRAKY+ L E ++ HLGM+G+ F++ K +H H T + Sbjct: 60 TITKIERRAKYIFFHLLKDEVPYVLVSHLGMTGAWFVVNSPEDINEAKFQKHIHATFKMA 119 Query: 105 NNTNTKKYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +IY+D RRFG F+ +E + PL + PEP D ++T Sbjct: 120 DGGY-----LIYSDIRRFGELRFLAKIEDHI-----PLTKMAPEPFDELACEFFITKSTL 169 Query: 162 KKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K +N +K +++ ++++G GNIY EAL+ K+ P RK + + L + Sbjct: 170 PKYANKAVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMNRISEKRKRA------LFE 223 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 EI VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR Sbjct: 224 EIVAVLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKICPA---CETATSQMTIGGR 280 Query: 280 STFYCTYCQ 288 ++ +C CQ Sbjct: 281 TSSFCPNCQ 289 >gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 286 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE I+ +L ++ + + L P F G ++ RRAK+ Sbjct: 1 MPELPEVETIKNDLRGLVVGSRIERAEVREPALVEQPPQEEFVRRLGGARVTGARRRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK---KYRVIY 116 L++EL+ +++ L + G ++ P++ P+ + V + L+ + + + + + Sbjct: 61 LVVELDTGEALVFQLKIGGQLLL-----VPPVEEPE-DSVMLVLSLDGGRRLLLRDQTGF 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + R G +L E L LGPEP F YL + + + +K LL+Q + Sbjct: 115 SRARLLGEKELAER--------LSGLGPEPFSEEFTVRYLKERLGSRRAQIKPLLLDQSL 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++GIGNIY E L+ A+LSP R+ SL + +L I+ L I+ G+++ Sbjct: 167 ISGIGNIYADEILYDARLSPRRRASSLSEEE------WERLYAAIRSNLAAGIEHRGTTV 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R Y + G G QN V+ + G PC CG + R GR T YC CQ Sbjct: 221 RLYRDVLGRAGEHQNHLRVFERHGGPC-PRCGAEVVRERVGGRPTHYCPRCQ 271 >gi|226226067|ref|YP_002760173.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226089258|dbj|BAH37703.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 264 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 134/290 (46%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L + TV + + P A G + V RRAK Sbjct: 1 MPELPEVEYAASQLRDRVLGQTVQAVRVTHAAQARHLPSTDQQAIVGLTLDRVERRAKVQ 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+ + VH M+G ++ + +P ++L + RV DPR Sbjct: 61 LLHF-GSGVLEVHFRMTGDWVFSR------VTDPVPPFERLALETDAG---LRVSLVDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +V Y L +GPEP ++F+ H ++ +K LL+Q++VAGI Sbjct: 111 ---ALSVVRWHAAGSYRGL-EVGPEPLSDAFSVDVFRHALTRRRGPIKPVLLDQRVVAGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EALW A ++P + I N T K L +L I+ VL A DA Y Sbjct: 167 GNIYASEALWEAGIAP-----TAIANTIT-KPRLTRLRDAIRVVLETAPDA------RYF 214 Query: 241 HIDGSIGYFQN-AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D ++ + VYG+ G PC CG IRR+VQAGRST+YC CQ+ Sbjct: 215 ERDTPDEQERDRRWRVYGRDGRPC-RRCGSAIRRLVQAGRSTYYCAVCQR 263 >gi|120601184|ref|YP_965584.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] gi|120561413|gb|ABM27157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] Length = 371 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 114/222 (51%), Gaps = 18/222 (8%) Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 L + HL M+G I + I H V L T R+ ++D R+FG++ Sbjct: 168 LGLAFHLKMTGRLFIHPPATPAGI----HTRVVFDLEGGT-----RLFFDDARKFGYVRC 218 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + +P R LGPEP + +A + ++ +K LL+QK+VAG+GNIY E Sbjct: 219 ITRRSLALWPFWRDLGPEPLET--DARGFAARLARRRGRIKALLLDQKVVAGVGNIYADE 276 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 +L+RA + P + +LI L+ L +Q VL ++I GSS+RDY G G Sbjct: 277 SLFRAGIRPDTQAHTLIPER------LFALHGHLQDVLRESIAECGSSIRDYRDAHGDAG 330 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQN+F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 331 AFQNSFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPRCQR 371 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE I L + + + +H P F+ A +G++I DV RR Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLRTPAAFTEAVQGRRIADVGRRG 60 Query: 58 KYLLIELEGNLSIIVHLG 75 K LL+ +L + H G Sbjct: 61 KLLLVAFA-SLPPVGHAG 77 >gi|85860946|ref|YP_463148.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] gi|85724037|gb|ABC78980.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] Length = 311 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 88/293 (30%), Positives = 144/293 (49%), Gaps = 38/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD-ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + + + L K + D +G+ I V+R K Sbjct: 51 MPELPEVETLCRQLRQKVPHAKIKGTFILDSKLGKLD-------NLKGRGIASVTRLGKR 103 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--KNPQHNHVTISLTNNTNTKKYRVIYN 117 +++ L+ S+ +HL M+G + + KP + P H+ + LT R+I Sbjct: 104 IVLGLDDGRSLEIHLRMTGRLLWQE----KPDIGEKPPHSRFILDLTPG------RIIIV 153 Query: 118 DPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRF + LV + K L+ PE L + ++ ++K+ L++Q Sbjct: 154 DPRRFATLSLVADAAKGNAAVDALKPGCPE---------ALKEKGCNRSRSIKSFLMDQS 204 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I+ GIGNIY CE L+RA L+P+R+T L + ++ + +VL A+ G+S Sbjct: 205 IIGGIGNIYACEILYRAGLNPLRRTADLTSED------WRRVGSAMVEVLSKAVVCRGTS 258 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D+ + G G +Q VYG+ G+ C +CG +I+R+ GR T++C CQ Sbjct: 259 ISDWRDLFGCKGEYQKELRVYGREGKKC-PHCGGIIQRVRLLGRGTWFCPNCQ 310 >gi|169348424|ref|ZP_02866362.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] gi|169293893|gb|EDS76026.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] Length = 270 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 141/289 (48%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + + D F + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDDIEEFKNKVCNQVINDIDRIGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ +++ + HL M G + + + +P+ +H+H+ +L + + YND R Sbjct: 61 IFKLD-DVAFVSHLRMEGKY--HYVNRDEPLN--KHDHIVFNLDDGKQLR-----YNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV PL LGPEP +Y + HK N +K+ALL+Q I+AGI Sbjct: 111 KFGRMKLVSLDNYANELPLSKLGPEPFYADEKKLY--EKLHKCNLPIKHALLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + L P L + + + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFAMGLDPYTPASKLTKKS------VKELIEVASSILNEAIKQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ V+ + C S CG I + GR T+YC CQK Sbjct: 222 SANGIDGLFQVKLKVH--LQKKC-SICGGEITKEAIKGRGTYYCKKCQK 267 >gi|121593321|ref|YP_985217.1| formamidopyrimidine-DNA glycosylase [Acidovorax sp. JS42] gi|166215605|sp|A1W4G6|FPG_ACISJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120605401|gb|ABM41141.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Acidovorax sp. JS42] Length = 271 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 145/293 (49%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + K LR+ A G+++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVG-KPLRWPLGTE-PAVLVGRRVCGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ L +I HLGMSGS A+ H+H + T + +DPR Sbjct: 59 LLDLDEGLLLI-HLGMSGSLRFARDLPARG----AHDHFELITDQGT------LRLHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTL----GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG V + P R L G EP F K + +K LL + Sbjct: 108 RFG---AVVWAAGESDPRARKLLDGWGLEPLGEDFAFETFHAGLRAKRTPIKQLLLAGTV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY CE L+ A + P + ++ +L I++VL A++ GGS+L Sbjct: 165 VVGVGNIYACEVLFLAGIRPTTRACAIGPQRAR------RLHGAIREVLARAVERGGSTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DGS G+FQ +VYG+ G PC CG +R + Q RST++C +CQ+ Sbjct: 219 RDFSSADGSAGHFQLEANVYGRAGLPC-RQCGTPVRLLRQGQRSTYFCPHCQR 270 >gi|170781178|ref|YP_001709510.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169155746|emb|CAQ00867.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 311 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 88/315 (27%), Positives = 146/315 (46%), Gaps = 41/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + L ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLIELE--------GNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + LE G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPEPTGDRTGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPAHGELVV 120 Query: 102 SLTNNTNTKKYRV--IYNDPR-----RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 + + V + P R LV T + + + +P D +F+ Sbjct: 121 AFVDQRIFGSMAVDRLVATPDGHAGGRGSTAALVPTQVAH-------IARDPLDPAFDDE 173 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 L + ++ + +K ALL+Q +V+GIGNIY EALW A++ T L + Sbjct: 174 QLLSRLARRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPTDQLGRGRA------ 227 Query: 215 YKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 +L+ E++ VL A+ GG+S YV+++G+ GYF ++ + YG+ G+PC CG I R Sbjct: 228 LRLLAEVRHVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKPC-PRCGTPIVR 286 Query: 274 IVQAGRSTFYCTYCQ 288 R + +C CQ Sbjct: 287 EAFMNRGSHFCPRCQ 301 >gi|317495934|ref|ZP_07954297.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] gi|316914111|gb|EFV35594.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] Length = 286 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/303 (31%), Positives = 139/303 (45%), Gaps = 33/303 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-------HRKN----LRFDFPHHFSAATRGKK 49 MPELPEVE I+ L+ + N + + H +N ++ D + F+ K Sbjct: 1 MPELPEVENIKLGLVDQVLNKKIVGVSYSEIVKLGHSENKMTIVKQDLDY-FANNVINKN 59 Query: 50 IIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTN 108 I ++RR KYL L N II H GM+G+F + KN H H+ L Sbjct: 60 IEGLTRRGKYLYFTL-SNGYIIAHFGMTGAFFVVKDIAEITNKNYYNHRHIIFELDT--- 115 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQFHKKNSN 166 K +++Y+D RRFG + ++ ++ P L PEP + + +L K+ Sbjct: 116 --KEKLVYSDIRRFGELRYIDEITMFK--PFIDLAPEPFSQTAKSYFLEKLESPKYKDQP 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL + G GNIY CE L+R K+ P+ K L + L E+ +L Sbjct: 172 IKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELTKKQKE------NLFDELVNILT 225 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI+ GGS++ D+VH DG G QN +YGK P G IV R++ +C Sbjct: 226 FAIEQGGSTISDFVHSDGGEGNMQNFHQIYGKKTCP----LGHKTDNIVIKTRASHFCPI 281 Query: 287 CQK 289 CQK Sbjct: 282 CQK 284 >gi|289807172|ref|ZP_06537801.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 165 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 9/174 (5%) Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K Sbjct: 1 YTDPRRFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNK 58 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++ Sbjct: 59 LVVGVGNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTT 112 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 113 LKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 165 >gi|72383541|ref|YP_292896.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] gi|90101309|sp|Q46H41|FPG_PROMT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72003391|gb|AAZ59193.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] Length = 282 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + ++ R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIVSVKNSYLGSWERRGK 60 Query: 59 YLLIEL--EGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL+ L + S ++VHL M+G F + K + +H V + ++ R Sbjct: 61 YLIGSLLTKEKFSKGFLVVHLRMTGQFKL----LEKEVLACKHTRVRFF---DERGRELR 113 Query: 114 VIYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 I D R FG M V +S + ++ LGPEP + FN+ YL KK ++K+AL Sbjct: 114 FI--DIRNFGQMWHVPSSRSIPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ VAG+GNIY E L+ A ++P +++R+L L +L + K+L +I Sbjct: 172 LDQETVAGVGNIYADETLFDAGINPKKESRNLKSTE------LKRLCNSLVKILNISIGE 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 226 GGTTFSDFRDLEGINGNYGGQAWVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|282896919|ref|ZP_06304925.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] gi|281198328|gb|EFA73218.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] Length = 277 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 143/293 (48%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + + +T D+ L + + F F +G I R Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITGGDVLLA-STVAYPFAGEEFIGDIKGNTIKSWIRCG 59 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL EL + + VHL M+G + + + P H H + L K+ + + Sbjct: 60 KYLLAELSSSAWLGVHLRMTGQLLWLNQ------EEPLHKHTRVRLFFG---KEQELRFV 110 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + + + L L +P F YL + K +K ALL+Q Sbjct: 111 DQRTFGKMWHVPSGVVREEIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQS 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P + I N K I L I +VL +I AGG++ Sbjct: 171 IVAGLGNIYADEALFKSGILP-----TTICTNIDEKQI-GSLRMAIIEVLSASIAAGGTT 224 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 225 FSNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|124025133|ref|YP_001014249.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus str. NATL1A] gi|166198728|sp|A2C0H4|FPG_PROM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123960201|gb|ABM74984.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. NATL1A] Length = 282 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + ++ R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIDNVKNSYLGNWERRGK 60 Query: 59 YLLIEL--EGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL+ L + S ++VHL M+G F + K + +H V ++ R Sbjct: 61 YLIGSLLTKEKFSKGFLVVHLRMTGQFKL----LEKEVLACKHTRVRFF---EERGRELR 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 I D R FG M V +S ++ LGPEP + FN+ YL KK ++K+AL Sbjct: 114 FI--DIRNFGQMWHVPSSRSVPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+ VAG+GNIY E L+ A ++P ++R+L N L +L + K+L +I Sbjct: 172 LDQRTVAGVGNIYADETLFDAGINPKTESRNLKSNE------LKRLCNSLIKILNISIGE 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 226 GGTTFSDFRDLEGGNGNYGGQALVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|87303067|ref|ZP_01085865.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] gi|87282234|gb|EAQ74194.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] Length = 281 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 30/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L +K + + + R+ P F A G + SRR Sbjct: 1 MPELPEVETVRRGLERQLKGFEIERVEVLRQRA-IAAPEEVDQFRAGLIGCLVGTWSRRG 59 Query: 58 KYLLIEL--EGNLS--IIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVTISLTNNTNTKK 111 KYL+ EL +G + VHL M+G F+ ++ P+ H + + ++ Sbjct: 60 KYLMAELSRDGQSAGHWGVHLRMTGQFLW--------LEEPREPCAHTRVRCWSRLG-QE 110 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 R I D R FG M + L L+ LGPEP +F+ YL + +K Sbjct: 111 LRFI--DVRSFGQMWFIPCGLDCSCVMTGLQKLGPEPFSEAFSGAYLQQKLKGSVRPIKA 168 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +VAG+GNIY E+L+ A ++P R++ SL + EI +I Sbjct: 169 ALLDQALVAGVGNIYADESLFTAGVAPQRRSGSLSLLELERLRRSLIEVLEI------SI 222 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +GG++ D+ + G+ G + VY + G+PC CGQ I+R GRS+ +C+ CQ+ Sbjct: 223 GSGGTTFSDFRDLSGTNGNYGGVAWVYRRGGQPC-RRCGQPIQRERLGGRSSHWCSNCQR 281 >gi|71894461|ref|YP_278569.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] gi|71851249|gb|AAZ43858.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] Length = 281 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 28/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-----DFPHHFSAATRGKKIIDVSR 55 MPE PEV ++ ++L ++ + + L + DF F+ T K ++ Sbjct: 1 MPEYPEVTVVCQSLSKLLLGKKINNCELLSEKFAKNSSVKDFEEFFNNKTFKK----INN 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K++ + IVHL M G F I TS + + +H+H+ L N+ + Sbjct: 57 TGKFIEFIFDDKSRAIVHLRMEGKFFIRKTSDLEKYR-FKHDHIYFHLGNDET-----LA 110 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YND R FG + + K ++ L P D + YL + ++K LL+QK Sbjct: 111 YNDSRGFGSFETISKENKLSVKEIKNLANLPKDVDID--YLYKKLQNTTRSIKTILLDQK 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V GIGNIY E L+ +K+ P+ K ++L K L L+ Q+++ ++I GGS+ Sbjct: 169 LVLGIGNIYADETLFASKIFPMEKAKNL------SKAQLKTLMDNAQRIMDESIKLGGST 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI----VQAGRSTFYCTYCQ 288 + Y ++G G FQ VYG+ CL CG ++++ Q GR T YC CQ Sbjct: 223 VHSYQSVNGIDGKFQQRLKVYGRAKLNCLE-CGSFVKKVKLDFKQNGRGTSYCPNCQ 278 >gi|330984358|gb|EGH82461.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 258 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 123/243 (50%), Gaps = 27/243 (11%) Query: 47 GKKIIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 G+ I+ +SR KY+LIEL G+L + HLGM+G +I S +H+ + S + Sbjct: 37 GQAIVSISRLGKYILIELTRGHL--VCHLGMTGKLVINAESA-------KHDRIRFSFED 87 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 T ++YND R+FGF+ + +Y L LG EP +F+ L + Sbjct: 88 GTT-----LVYNDVRKFGFVMYESDVARNKY--LSHLGIEPLSEAFSPESLMAMAAGNRT 140 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q+ +AG+GNIYV E L+ +SP TR L + +L+ I+ +L Sbjct: 141 PIKVFLLDQRKIAGLGNIYVNEVLYECGISPHLLTRDLSSCQAS------RLVPAIKTML 194 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +I+ GGSS+ DY D G FQ+ F VYG+ + G + R Q GRSTFY Sbjct: 195 KRSIELGGSSISDYRDADDKKGSFQDTFRVYGRD----FDHLGNAVTRATQGGRSTFYVE 250 Query: 286 YCQ 288 Q Sbjct: 251 ALQ 253 >gi|325916140|ref|ZP_08178427.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537684|gb|EGD09393.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 177 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 16/190 (8%) Query: 101 ISLTNNTNTKKYRVI-YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 ISL N RV+ +NDPRRFG L+ S Q+ L LGPEP +F YL Sbjct: 3 ISLENG------RVLRFNDPRRFGC--LLWQSDTQQHELLAALGPEPLSQAFTGDYLYAL 54 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + +K L++Q +V G+GNIY E+L RA +SP+R+ + + L Sbjct: 55 SRGRRAAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKV------SLERYRSLAT 108 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 ++ +L AI GG++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R Sbjct: 109 AVKDILGYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQR 167 Query: 280 STFYCTYCQK 289 +T +C +CQ+ Sbjct: 168 ATVWCGHCQR 177 >gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] Length = 300 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 135/291 (46%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPEL EVE+IRR L + TVT + + R + P F+ G I + RR K Sbjct: 27 MPELAEVEMIRRVLEPQLGGRTVTKLLVVRPEV-VAHPQTEQFAENVCGAVIERLCRRGK 85 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL I + +VHL M+G ++ P +P + + L+ + + ++ R + D Sbjct: 86 YLQIIFQNGSRAVVHLRMTGQLLV------LPADSPPEKYTQLVLSLD-DGRELRFL--D 136 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG ++ + ++TLGPEP+D A YL + +K+ LL Q+ VA Sbjct: 137 MRRFGRWWFLQKDEPDTFTGMQTLGPEPSDERLTAGYLREKAGASRKAIKDWLLCQQYVA 196 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ A + P R SL + +L +EI + + ++ S D Sbjct: 197 GIGNIYSDEILFAAGIYPGRGACSLTEKE------WERLAEEIPRTMQFFVEKNEISAED 250 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y+ G VYG G PC CG + AGRS+ YC CQK Sbjct: 251 YLKSKGRDYRNTPYLQVYGHKGAPC-PKCGAPLAGSRIAGRSSVYCLQCQK 300 >gi|297571638|ref|YP_003697412.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] gi|296931985|gb|ADH92793.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] Length = 284 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 139/306 (45%), Gaps = 42/306 (13%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFS-AATRGKKIIDVSRRA 57 MPELPEVE +R L+ +V K + D+ LH + R F G I V RR Sbjct: 1 MPELPEVETVRAGLVPHVVGKTIERADL-LHSRVARMS---EFGLEPVVGATISAVVRRG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + E +++ HLGMSG F I N +H I T+ T + Sbjct: 57 KYLWMVTEAG-ALVAHLGMSGQFRIN--------SNSKHLRARIHFTDGTALD-----FV 102 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLG--PEPA--------DNSFNAIYLTHQFHKKN 164 D R FG + LV T L P+ A D + + Q + Sbjct: 103 DQRTFGHLHPDRLVATGDGGPGGMGSDLALIPQSAAHIGRDLLDPHCDIYSVARQVKRGR 162 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +K +LNQ I +GIGNIY EALW A++ P + T ++ + + + + V Sbjct: 163 TEIKRVMLNQNIASGIGNIYADEALWEARVHPKKITSAMTLTQ------IRDVYEAARDV 216 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A+ GG+S YV+++G GYF + +VYGKTG C CG I R+V RS+ Sbjct: 217 MAAALAVGGTSFDSLYVNVNGESGYFDRSLNVYGKTGCAC-ERCGTQIERLVFMNRSSHV 275 Query: 284 CTYCQK 289 C CQ+ Sbjct: 276 CPACQR 281 >gi|213029143|ref|ZP_03343590.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 220 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 19/239 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L+ A + P R SL D+L ++ I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARV---IKAVLLRSIEQGGTTLKDF 220 >gi|46581658|ref|YP_012466.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|81698981|sp|Q726D5|FPG_DESVH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46451081|gb|AAS97726.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|311235298|gb|ADP88152.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris RCH1] Length = 365 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 18/222 (8%) Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 L + HL M+G I + I H V L T R+ ++D R+FG++ Sbjct: 162 LGLAFHLKMTGRLFIHPPATPAGI----HTRVVFDLEGGT-----RLFFDDARKFGYVRC 212 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + +P R LGPEP + ++ +K LL+QK+VAG+GNIY E Sbjct: 213 ITRRSLALWPFWRDLGPEPLETEARGFAARLA--RRRGRIKALLLDQKVVAGVGNIYADE 270 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 +L+RA + P + +L TP+ L+ L +Q VL ++I GSS+RDY G G Sbjct: 271 SLFRAGIRPDTQAHTL-----TPER-LFALHGHLQDVLRESIAECGSSIRDYRDAHGDAG 324 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQN+F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 325 AFQNSFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPQCQR 365 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL---RFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE I L + + + +H P F+ A +G++I DV RR Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLCTPAAFTEAVQGQRIADVGRRG 60 Query: 58 KYLLIELEGNLSIIVHLG 75 K LL+ +L + H G Sbjct: 61 KLLLVAFA-SLPPVGHAG 77 >gi|284053014|ref|ZP_06383224.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis str. Paraca] gi|291570672|dbj|BAI92944.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis NIES-39] Length = 304 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 139/313 (44%), Gaps = 42/313 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L N + D+ L + P F A I RR K Sbjct: 1 MPELPEVETVRKGLNQTTLNQPIVGADVLLDSA-IAHPCPVEFIAQINNTTINHWYRRGK 59 Query: 59 YLLIELEGNLS---------------------IIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 YLL +L+ + VHL M+G + C P+H Sbjct: 60 YLLAQLQAPSQPSNPIFTSKDPIETQTSDGGWLGVHLRMTGQLLW----CTSDQSLPKHT 115 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIY 155 V + L + + D R FG + LV L LR LGPEP + F+ Y Sbjct: 116 RVRLFLPEERELR-----FVDQRTFGKIWLVPPHLAVMDVISGLRELGPEPLSDEFSPEY 170 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 L + + +K ALL+Q I+AG+GNIY EAL+ A++ P + L D L Sbjct: 171 LATKLRRSQRPIKTALLDQSILAGLGNIYADEALFLARIQPTTPSCRLS------PDQLN 224 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L I VL AI GG+++R+++++ G G + + VY + G+PC C I +I Sbjct: 225 RLYTHIVAVLQQAIADGGTTIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RVCQTPITKIK 283 Query: 276 QAGRSTFYCTYCQ 288 +GR T +C CQ Sbjct: 284 LSGRGTHFCPMCQ 296 >gi|325128407|gb|EGC51290.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 215 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 7/203 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTGV-LLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSL 203 GNIY E+L+RA +SP R L Sbjct: 174 GNIYANESLFRAGISPHRPANRL 196 >gi|119509416|ref|ZP_01628564.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] gi|119465822|gb|EAW46711.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] Length = 280 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 139/306 (45%), Gaps = 45/306 (14%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSR 55 MPELPEVE IRR L + + + +T D+ L R +P F+ G I R Sbjct: 1 MPELPEVETIRRGLNQLTLHQKITGGDVLLDRT---IAYPLSVDKFTPKIIGSAIASWHR 57 Query: 56 RAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 R KYLL EL + + VHL M+G + + + P H H + Sbjct: 58 RGKYLLAELTPSPQTHWLGVHLRMTGQLLWVNQN------EPLHKHT-----------RV 100 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQFHK 162 R+ + D + F+D + PP L L +P F YL + Sbjct: 101 RLFFGDEQELRFVDQRTFGQMWWVPPGVAVETIMTGLAKLAVDPFSPEFTVEYLASKLQN 160 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + +K ALL+Q +VAG+GNIY EAL+++ + P+ L + L I Sbjct: 161 RRRPIKTALLDQSVVAGLGNIYADEALFKSGILPVTLCIDLQLEQ------IQSLHTTII 214 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ +++++ G G + VY ++GEPC C I+RI AGRS+ Sbjct: 215 QVLETSIAAGGTTFSNFLNVQGVNGNYGGVAWVYNRSGEPC-RVCSTPIQRIKLAGRSSH 273 Query: 283 YCTYCQ 288 +C CQ Sbjct: 274 FCPQCQ 279 >gi|315655501|ref|ZP_07908400.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315490156|gb|EFU79782.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 321 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 144/326 (44%), Gaps = 44/326 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPH--HFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITELRTGLVGARLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIE--------HTSCAKPIKNPQHNHVTI 101 K+L L EG L++++HLGMSG +E + P PQ++ T Sbjct: 61 GKFLWFSLSGEVPSSEGPLALVIHLGMSGQLRVESRGATLHRKEAATSPQVAPQYSRETR 120 Query: 102 SLTNN----TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---------AD 148 L + T + +++ D R FG ++L P PEP A Sbjct: 121 LLLHERLRFTLDNEKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPLGVEHIAR 180 Query: 149 NSFNAIYLTHQFHKKNSN----LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + + T F KK +K LL+Q IV+GIGNIY E L+ A++ P RSL Sbjct: 181 DVLDPCRDTTDFVKKTRASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAPGRSLS 240 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPC 263 L +L+ + V+ A+ GG+S R YV+ G+ G F VYG+ G+ C Sbjct: 241 DRK------LRELLGAVAAVMGQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGGQSC 294 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + +++ GRS+ +C CQ+ Sbjct: 295 -HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|50954669|ref|YP_061957.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648675|sp|Q6AFJ3|FPG_LEIXX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50951151|gb|AAT88852.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 297 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 21/303 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + ++L+ P F + G+ + +RR Sbjct: 1 MPELPEVEVVRAGLAPAVTGATILGVEVFELRSLKRHDPLAGSFESLLTGRSMQTPARRG 60 Query: 58 KYLLIELEGN--LSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTISLTNNT 107 K+L I L+ + +I+ HLGMSG ++ + I++P+H + + + Sbjct: 61 KFLWIPLDSSPRSAIVAHLGMSGQILLRDPGTVENGLLRIRLYIEHPEHGELWVHFVDQR 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V P G + T + + +P D F+ ++ S + Sbjct: 121 LFGSMAVDALVPTVDGAPAGLGTDEALLPAQVSHIARDPLDPVFDDAAFAAVLARRRSGI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGNIY E+LW A++ +L + P+ + L+ E+++VL Sbjct: 181 KRVLLDQTLISGIGNIYADESLWAARIHYDHPATALSR----PR--VRTLLAELRRVLGR 234 Query: 228 AIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G+ GYF + VYG+ G+PC CG I R R + +C Sbjct: 235 ALAEGGTSFDAQYVNVNGASGYFSRSLHVYGRQGQPC-DRCGTAIVRESFMNRGSHFCPR 293 Query: 287 CQK 289 CQ+ Sbjct: 294 CQR 296 >gi|197294837|ref|YP_001799378.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] gi|171854164|emb|CAM12157.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] Length = 271 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPELPEV+II + ++K+ + + K +F A ++ K I+D+ R+ K Sbjct: 1 MPELPEVQII----VNILKSKLIGAKIIKTKVFYAPVIKNFEAFSQIEEKTILDIQRKGK 56 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH--NHVTISLTNNTNTKKYRVIY 116 +LL L L II HL + G + KP NP H + N+ + + Y Sbjct: 57 FLLFFLTQKLVIIGHLRLEGKLFL------KPASNPHEATEHFVLFFDNDLSLR-----Y 105 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG ++ L L +P + F Y + K + LK LLNQKI Sbjct: 106 YDFRKFGRFEVQNQKDFLTKTTLNQLASDPFEIDFMTFY--QKVVKSKTALKKVLLNQKI 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIYV E L+ AKL P +T++ N ++IL + +KVL AI GGSS+ Sbjct: 164 ISGLGNIYVNEVLFLAKLHP--ETKACDLNPSQVQNIL----EIAKKVLKKAIFFGGSSI 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G+ G FQN V+GK PC + C I +I GR T+ C CQ Sbjct: 218 STFEPEEGTKGSFQNHLLVHGKQKIPC-TVCMTNIIKIKVGGRGTYLCPSCQ 268 >gi|113474804|ref|YP_720865.1| formamidopyrimidine-DNA glycosylase [Trichodesmium erythraeum IMS101] gi|123352603|sp|Q117D2|FPG_TRIEI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110165852|gb|ABG50392.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Trichodesmium erythraeum IMS101] Length = 300 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 69/329 (20%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSR 55 MPELPEVEI+++ L + + K + ++ L R +P F GK I R Sbjct: 1 MPELPEVEIVKQGLNQLTLNKRILGGEVLLERT---LAYPISVADFLRGLEGKAIAQWHR 57 Query: 56 RAKYLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ---H 96 + KYLL +L +G L VHL M+G + NP+ H Sbjct: 58 QGKYLLAQLYKWGKKNSKLQEYENEDGWLG--VHLRMTGQLLW---------VNPEESLH 106 Query: 97 NHVTISL------TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----------LR 140 H + L + + ++ Y + + D R FG M + PP L+ Sbjct: 107 KHTRVRLFFGHNSSGDKDSSNYELRFVDQRTFGKM--------WGVPPGKEISKVITGLQ 158 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LG EP F+ YL + +K++ +K ALL+Q +AG+GNIY EAL+ + + P Sbjct: 159 QLGLEPFSPEFSPKYLNKKLYKRHRPIKTALLDQTTIAGLGNIYADEALFLSGIRPTTIC 218 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 + L + + +L I KVL AI+AGG++ +++++ G G + VY + G Sbjct: 219 KDLTEKQ------IEQLHLAILKVLQTAINAGGTTFSNFLNVKGVNGNYGGVAWVYSRAG 272 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +PC C + +I AGRST +C CQK Sbjct: 273 QPC-RICNTPLEKIKLAGRSTHFCPQCQK 300 >gi|255525116|ref|ZP_05392060.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296188081|ref|ZP_06856473.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|255511170|gb|EET87466.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296047207|gb|EFG86649.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] Length = 277 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++R L +K + + + K + + F G+ I+ + RR K+ Sbjct: 1 MPELPEVETVKRVLEPQIKGQKIKYVDISNKQVIAYPDAEAFCDNVIGQTIVGIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I E +++HL M+G +I + K +H HV SL N + Y D Sbjct: 61 LNILFESGDRMVLHLRMTGCLLITPSEYEKA----KHTHVVFSLKNGNELR-----YIDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + + + LG EP D + YL + KK +K LL Q +VAG Sbjct: 112 RRFGRFWFLKKDEEDTFTGINKLGLEPFDKNLTGEYLHNCLLKKKKPIKECLLEQSMVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A L P R SL +L ++I L I+ S DY Sbjct: 172 IGNIYGDEILFAAGLCPSRPANSLTCEEYD------RLAKQISVTLAYFIEKNAISPEDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG E C C +++I+ AGRS+ +C CQ+ Sbjct: 226 LAGKGLKYRNTPYLKVYGHEKEKC-PVCRHDLKKIMLAGRSSVFCPNCQR 274 >gi|284931593|gb|ADC31531.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. F] Length = 274 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ P F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATPKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I S K + +H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKI---SQFKAKYDERHVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + L YQ L+ L +P ++ YL + K + +K+ LL+Q +VA Sbjct: 112 RRFGTFH-IHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+ +K++P +K L D +K I + KVL+ AI+ G+++ Sbjct: 171 GIGNIYADEILFLSKINPAKKANELT-------DQQFKEISKNATKVLLKAIELNGTTIF 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 224 SYQFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|301345445|ref|ZP_07226186.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595026|ref|ZP_07240034.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 202 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 19/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGSF + C + +H+H+ I + ++ Y+DPRRFG ++ + + Q Sbjct: 1 MSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPRRFGC--ILWLNPETQ 48 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + TLGPEP + F+A YL + K+ +K AL++ +V G+GNIY E+L+ + Sbjct: 49 GKLIDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH 108 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + L + KL+ EI+++L AID GGS+LRDY + G GYFQ Sbjct: 109 PAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLA 162 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 YGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 194 >gi|67925991|ref|ZP_00519260.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] gi|67852167|gb|EAM47657.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] Length = 278 Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 29/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ ++ L R F + RR K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIEGAEVLLDRTLAYPPSSQEFLDQIQNATFDKWQRRGK 60 Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ L+ + VHL M+G + + P H + L N +++ R + Sbjct: 61 YLLVPLQEKKGCLGVHLRMTGQLLWVKEN------EPLSRHTRLRLFCN-QSQELRFV-- 111 Query: 118 DPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 D R FG + V + PP L+ LGPEP F+ Y + ++ N+K L Sbjct: 112 DIRTFGKVWWVPPN----QPPENIITGLQKLGPEPFAKEFSIDYFIDRLKRRQRNIKTIL 167 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q IVAG+GNIY EAL+++ + P + L TP+ + +L + + +VL AID Sbjct: 168 LDQAIVAGMGNIYADEALFKSGILPTTLGKDL-----TPQQV-KRLREAMIEVLKTAIDQ 221 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+ +PC CG I +I GRS+ +C CQ Sbjct: 222 GGTTFSDFRGVTGINGNYGGVAWVYGRHKQPC-RVCGTPIEKIKLGGRSSHFCPQCQ 277 >gi|313678500|ref|YP_004056240.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] gi|312950460|gb|ADR25055.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] Length = 279 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L +KN +T++ + L + P F + I+D+ K Sbjct: 1 MPELPEVKTVVKALKSNIKNAKITNVFVFLDKLIKNVSPQEFKEYLLNETILDIYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L + ++I HL M+G + + + K +H++V L N + + YND Sbjct: 61 IIFKLSKDKNLISHLRMTGKYFTDTSLHHKR----KHDYVIFELNN-----QMYLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVA 178 R+FG + + S + PL LG E + + HQ K K +K+ LL+Q + Sbjct: 112 RQFGTFHIKDESELFTTKPLDKLGKEVDQIDPDKL---HQLIKNKTIPIKSFLLDQSYIL 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ + ++P K N P L +++ + +L A + GGS++ D Sbjct: 169 GIGNIYANEILYLSGINPWTKV------NKIPYAKLIEILNNTKIILDKATELGGSTIVD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + ++G+ G FQN V+ + PC + C +I++ A R T+YC CQK Sbjct: 223 FSGLNGAEGQFQNHLQVHMRANLPC-NKCKTLIKQETIAQRMTYYCPLCQK 272 >gi|308189908|ref|YP_003922839.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] gi|307624650|gb|ADN68955.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] Length = 273 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I LH K ++ F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + +P +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHYK--YRPA--TKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + ++ ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKELF--NKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC CQK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNCQK 273 >gi|148377581|ref|YP_001256457.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] gi|148291627|emb|CAL59013.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] Length = 279 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N+T+T++ + K ++ F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKGNILNLTITNVIVKLDKLIKNATASEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + + + +H+++ L + + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYFTDSSIN----RTRKHDYIIFELDS-----QMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P KT N P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKINPWTKT------NKIPYEKFKEILSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ + PC + C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRANMPC-NKCNALIQQEFIAQRMTYYCPICQK 272 >gi|319935866|ref|ZP_08010292.1| DNA glycosylase [Coprobacillus sp. 29_1] gi|319809133|gb|EFW05614.1| DNA glycosylase [Coprobacillus sp. 29_1] Length = 270 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L + + + I ++ + F + I D+ R KYL Sbjct: 1 MPELPEVETVRQTLRQFILDENIEGIDVYYDKIINGDTQEFIERLTHQTIRDIDRVGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ + + + HL M G + I P+ +H HV L + + + Y D R Sbjct: 61 IFLLDED-AFVSHLRMEGKYHI--VKRETPVD--KHTHVVFHLHDGQDLR-----YIDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++LV+ L + PL LG EP D S +Y HK + +K ALL+Q I+ GI Sbjct: 111 KFGRLELVDRHLYREQLPLMKLGKEPFDISGEELYAL--LHKTSLPIKTALLDQSIMCGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + K+ P +TR+ + K +++L Q VL AI GG+++ + Sbjct: 169 GNIYANEICFLMKIDP--RTRA----SRLSKKRVHELKQISVDVLNRAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ +G+ PC C I++I+ R T+YC +CQK Sbjct: 222 DANGIHGLFQVQLKAHGQKICPC---CQGEIKKIMLNQRGTYYCPHCQK 267 >gi|300741696|ref|ZP_07071717.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380881|gb|EFJ77443.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 331 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 74/343 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + L +++R F+ G +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVHILDERSIRRHIGGSADFTMRLEGTRIRGAYRRG 60 Query: 58 KYLLIELEGN-----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + L + ++++HLGMSG ++ K + P H+ Sbjct: 61 KYMWLTLSASDDEPSPKPGDSDDTLLPYALVIHLGMSGQLLV------KTPEFPAEKHLK 114 Query: 101 ISL----TNNTNTKKYRVIYNDPRRFGFMDLVE--------TSLK-YQYPPLRTLGPE-- 145 I L N+ K + + D R FG M L E SL + P L PE Sbjct: 115 IVLELEPANDDIGKTIELRFVDQRIFGGMFLSEVVPGIPAGASLAGAEEIPEELLVPEAV 174 Query: 146 ------PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 P D F+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + Sbjct: 175 EHIGRDPVDPYFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAKP 234 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGK 258 +SL +L + +VL +A+ AGG+S YV+++G GYF + + YG+ Sbjct: 235 AKSLSAAQ------TRELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYGR 288 Query: 259 TGEPCLSNCGQMIRRIVQAG------------RSTFYCTYCQK 289 GEPC RR ++AG RS++ C +CQ+ Sbjct: 289 AGEPC--------RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 323 >gi|148272539|ref|YP_001222100.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830469|emb|CAN01404.1| fpgA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 311 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 33/311 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + L ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLIELE--------GNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + LE G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPDPGRDATGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPVHGELVV 120 Query: 102 SLTNN---TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + + + R++ G S+ Q + + +P D +F+ L Sbjct: 121 AFVDQRIFGSMAVDRLVPTPDGHAGGRGSDAASVPTQ---VAHIARDPLDPAFDDELLLD 177 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + ++ + +K ALL+Q +V+GIGNIY EALW A++ T +L + +L+ Sbjct: 178 RLARRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPTDALARGRA------LRLL 231 Query: 219 QEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 E+++VL A+ GG+S YV+++G+ GYF ++ + YG+ G PC CG I R Sbjct: 232 AEVRQVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGRPC-PRCGTPIVREAFM 290 Query: 278 GRSTFYCTYCQ 288 R + C CQ Sbjct: 291 NRGSHLCPRCQ 301 >gi|50842930|ref|YP_056157.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840532|gb|AAT83199.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|315106731|gb|EFT78707.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] Length = 256 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRV------SPQHAPQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFFRVVDAYGREDEP 252 >gi|222110042|ref|YP_002552306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] gi|254789435|sp|B9ME52|FPG_DIAST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221729486|gb|ACM32306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] Length = 271 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 144/293 (49%), Gaps = 27/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + K LR+ A G+++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVG-KPLRWPLGTE-PAVLVGRRVCGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ L +I HLGMSGS A+ H+H + + T + +DPR Sbjct: 59 LLDLDEGLLLI-HLGMSGSLRFARDLPARG----AHDHFELITDHGT------LRLHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTL----GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 RFG V + P R L G EP F K + +K LL + Sbjct: 108 RFG---AVVWAAGESDPRARKLLDGWGLEPLGEDFAFEAFHAGLRAKRTPIKQLLLAGTV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G+GNIY CE L+ A + P + ++ +L I++VL A++ GGS+L Sbjct: 165 VVGVGNIYACEVLFLAGIRPTTRACAIGPQRAR------RLHGAIREVLARAVERGGSTL 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DGS G+FQ +VYG+ G C CG +R Q RST++C +CQ+ Sbjct: 219 RDFSSADGSAGHFQLEANVYGRAGLQC-RQCGTPVRLSRQGQRSTYFCPHCQR 270 >gi|168705276|ref|ZP_02737553.1| formamidopyrimidine-DNA glycosylase [Gemmata obscuriglobus UQM 2246] Length = 214 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 101/213 (47%), Gaps = 18/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F + P H H +L N + + + D RRFG + + Sbjct: 1 MTGQFTVVPAD----APEPDHLHAVFALDNG-----HELRFRDQRRFGSAEFFADRAAVE 51 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 LGPEP + +A Y NLK LL+Q +VAG+GNIY EA +RAKL Sbjct: 52 SEMNAELGPEPFN--IDADYFRAAVSGTGRNLKAVLLDQTVVAGVGNIYADEACFRAKLH 109 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R L L + ++ VL AI++ GS++RDYV G G FQN F+V Sbjct: 110 PGRPGNKLTAGE------CDALREAVEAVLTRAIESRGSTIRDYVGGSGLRGGFQNEFAV 163 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+TGEPC C + AGR++ +C CQ Sbjct: 164 YGRTGEPC-PTCAAAVVCARYAGRASHFCPRCQ 195 >gi|311113799|ref|YP_003985021.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] gi|310945293|gb|ADP41587.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] Length = 332 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 75/344 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR--FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + L +++R F+ +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVRILDERSIRRHIGGSADFTTCLERTRIRGAYRRG 60 Query: 58 KYLLIELEGN-----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + L ++++HLGMSG ++ K + P H+ Sbjct: 61 KYMWLTLSAPEDEPFPKRGDSDDTLLPYALVIHLGMSGQLLV------KTPEFPAEKHLK 114 Query: 101 ISLT-----NNTNTKKYRVIYNDPRRFGFMDLV----------------ETSLKYQYP-P 138 I L + K + + D R FG M L E S ++ P Sbjct: 115 IVLELEPADGESTNKATELRFVDQRIFGGMFLSNLVPDIPAGTSSAGAEEISEEFLVPEA 174 Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + +G +P D SF+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + Sbjct: 175 VEHIGRDPVDPSFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAK 234 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYG 257 +SL +L + +VL +A+ AGG+S YV+++G GYF + + YG Sbjct: 235 PAKSLSAAQ------TRELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYG 288 Query: 258 KTGEPCLSNCGQMIRRIVQAG------------RSTFYCTYCQK 289 + GEPC RR ++AG RS++ C +CQ+ Sbjct: 289 RAGEPC--------RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 324 >gi|172039237|ref|YP_001805738.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] gi|226761669|sp|B1WTF7|FPG_CYAA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171700691|gb|ACB53672.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] Length = 283 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 37/301 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRF-----DFPHHFSAATRGKKIIDVS 54 MPELPEVE + R L + T+ L + L + +F + AT G+ Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIRGGKVLLPRTLAYPVSIEEFLEQINNATFGQ----WQ 56 Query: 55 RRAKYLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 RR KYLL+ LE + VHL M+G + + P H + L + +K+ R Sbjct: 57 RRGKYLLVPLEEKKGWLGVHLRMTGQLLWVKQN------EPLSRHTRLRLFCD-RSKELR 109 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D R FG + V + PP L+ LG EP N+F+ Y + + N+ Sbjct: 110 FV--DIRTFGKVWWVPPN----QPPETIITGLQKLGLEPFSNAFSLDYFIDKLKGRQRNI 163 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +VAGIGNIY EAL+++ + P + L Q + +L + + +VL Sbjct: 164 KTILLDQSVVAGIGNIYADEALFKSGIRPTTLGKELSQPQ------VKRLREAMIEVLKT 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI+ GG++ D+ + G G + VYG+ +PC CG I RI GRS+ +C C Sbjct: 218 AIEEGGTTFSDFRGVTGINGNYSGVAWVYGRHNQPC-RVCGTPIERIKLGGRSSHFCPQC 276 Query: 288 Q 288 Q Sbjct: 277 Q 277 >gi|313665519|ref|YP_004047390.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] gi|312949704|gb|ADR24300.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] Length = 274 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINRTIIKSEIFSNKIVSSISVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ + II HL M+G ++IE K+ L NN + Y D Sbjct: 61 IVFELKEYV-IISHLRMTGKWVIEDPEQYAYKKSWLKAEFL--LDNNLVARFY-----DM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTNANLITKDQTKEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +QN V+ L C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQNKLFVHLNNKNCKL--CNTKISKIKVNGRGTYYCSNCQK 274 >gi|83319527|ref|YP_424603.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283413|gb|ABC01345.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 274 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ K + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINKTIIKSEIFSNKIVSSTSVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ + II HL M+G ++IE++ K+ L NN + Y D Sbjct: 61 IVFELKEYV-IISHLRMTGKWVIENSDQYAYKKSWLKAEFL--LDNNLVARFY-----DM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTNANLITKDQTKEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +Q V+ L C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQTKLFVHLNNKNCKL--CNTKISKIKVNGRGTYYCSSCQK 274 >gi|294660325|ref|NP_853016.2| formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284811982|gb|AAP56584.2| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284930494|gb|ADC30433.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(high)] Length = 274 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATAKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I S K + +H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKI---SQFKAKYDERHVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + L YQ L+ L +P ++ YL + K + +K+ LL+Q +VA Sbjct: 112 RRFGTFH-IHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+ +K++P +K L D +K I + KVL+ AI+ G+++ Sbjct: 171 GIGNIYADEILFLSKINPAKKANELT-------DQQFKEISKNATKVLLKAIELNGTTIF 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 224 SYQFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|289426426|ref|ZP_06428169.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|289153154|gb|EFD01872.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|313763648|gb|EFS35012.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313794041|gb|EFS42065.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801429|gb|EFS42680.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313816826|gb|EFS54540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829555|gb|EFS67269.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313839851|gb|EFS77565.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914650|gb|EFS78481.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314920853|gb|EFS84684.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930531|gb|EFS94362.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954309|gb|EFS98715.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957412|gb|EFT01515.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314963604|gb|EFT07704.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA1] gi|314968564|gb|EFT12662.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA1] gi|315079458|gb|EFT51451.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315099275|gb|EFT71251.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100491|gb|EFT72467.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315109075|gb|EFT81051.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327451939|gb|EGE98593.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327455026|gb|EGF01681.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457686|gb|EGF04341.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755142|gb|EGF68758.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758080|gb|EGF71696.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] Length = 256 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|41326247|emb|CAF20409.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE [Corynebacterium glutamicum ATCC 13032] Length = 277 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 39/297 (13%) Query: 10 IRRNLMMVMKNMT-VTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKYLLIEL-- 64 +RR L M T V+ LH + R A G ++ RR K+L +EL Sbjct: 1 MRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRGKFLWLELID 60 Query: 65 ------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L ++VHLGMSG +I+ PI H + L N V + D Sbjct: 61 APSGETRPDLGLLVHLGMSGQMLIKEPDA--PIS--PHLRAKVELDNGDE-----VWFVD 111 Query: 119 PRRFGFM---DLVETSLKYQYPPLRT--LGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 R FG+ DLV+ P R + + D S + + + S +K LLN Sbjct: 112 QRTFGYWWLGDLVDGV------PERVSHIATDVLDESADFSAIARNLKSRKSEIKRLLLN 165 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A+ GG Sbjct: 166 QEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKALAQGG 219 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +S YV+++G+ GYF + + Y +TGEPC CG +I R R + YC CQK Sbjct: 220 TSFDALYVNVNGNSGYFALSLNAYAQTGEPC-GRCGTLIIRESFMNRGSHYCPNCQK 275 >gi|42561208|ref|NP_975659.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492706|emb|CAE77301.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320956|gb|ADK69599.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 274 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTNVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ ++ II HL M+G ++IE++ K+ + L NN + Y D Sbjct: 61 IVIELKEHV-IISHLRMTGKWVIENSDQYAYKKSWLR--AELLLDNNLVFRFY-----DM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N +A YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSADYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L+ N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LVSANLITKDQTKEIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHMNNKNCKI--CDTKISKIKVNGRGTYYCSKCQ 273 >gi|88856700|ref|ZP_01131355.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] gi|88813997|gb|EAR23864.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] Length = 298 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 28/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T + + R R + P F G+ + RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGATAASVTVFDERSLRRHEGPSEDFIDRLTGRVFLPPQRRG 60 Query: 58 KYLLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K++ I L + +++ HLGMSG ++ S + + + I L ++ Sbjct: 61 KFMWIPLTDSDDAHGEALVTHLGMSGQVLLRDQST-----DDRLTRIRIEL-DHPEHGAL 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRT------LGPEPADNSFNAIYLTHQFHKKNSN 166 R+ + D R FG M + P + +P D F+ K + Sbjct: 115 RLNFVDQRIFGSMAIDSMLPTVDQPAFAVPSQVAHIARDPLDPHFDDAGFLRALKAKRTT 174 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+Q +V+GIGNIY EALW A++ + T +L + K +L L+ E++ V Sbjct: 175 VKRALLDQTLVSGIGNIYADEALWAARVHYNQPTGTLSRA----KALL--LLAEVRAVFS 228 Query: 227 DAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A+ GG+S Y++++G GYF ++ +VYG+ G C CG+ + R R + +C Sbjct: 229 KALAEGGTSFDTQYLNVNGESGYFAHSLNVYGQQGRAC-PRCGREVVREQFMNRGSHFCR 287 Query: 286 YCQK 289 +CQ+ Sbjct: 288 FCQR 291 >gi|295098756|emb|CBK87845.1| formamidopyrimidine-DNA glycosylase (fpg) [Eubacterium cylindroides T2-87] Length = 276 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K + D+ ++ L + F ++ + ++ D R KY Sbjct: 1 MPEAPEVQTVLSTLEHQIKGAKILDVKVYYPKLIQNLDVTEFVSSLKNQRFCDFFRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L ++ +L +IVHL M G F I + + +H H L + + Y+D Sbjct: 61 LGFVMD-DLDLIVHLRMEGKFYI----LKELPSDLKHIHCVTYLDDGR-----LLCYHDT 110 Query: 120 RRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ + + +G + D + + + H N+K+ALL+Q I+A Sbjct: 111 RKFGRMALYPKAVDVRRLDCFKNVGYDCLDENLDGMTFYKIIHPLKRNIKSALLDQSIIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+ KL P + + + + + ++I+Y ++++ A+ AGG+++R Sbjct: 171 GVGNIYADEILFSCKLDPRSRCQKISKKDC--ENIIY----HTKRIIRGAMKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K EPC C I++IV + R T+ C+ CQK Sbjct: 225 YTSSLGVTGLFQLELKVHSKKDEPC-PVCKNKIKKIVVSQRGTYLCSNCQK 274 >gi|314919237|gb|EFS83068.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] Length = 256 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFPRVLDAYGRENEP 252 >gi|47459207|ref|YP_016069.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] gi|81697049|sp|Q6KHS0|FPG_MYCMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|47458536|gb|AAT27858.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] Length = 274 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 141/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + +L ++ + T++ I + K ++ F + I ++ K+ Sbjct: 1 MPELPEVKTVILHLKKLILDKTISKIEIFIPKMIKEISSEEFKKYLENETIFNIENEGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + K I H+ + T+ ++ + Y+D Sbjct: 61 IVFFLSNNKIMLSHLRMEGGYNFYSKKRQKEI----HDRLIFHFTDGSS-----LHYHDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + PL + P P + + +K + +K LL+Q+I+AG Sbjct: 112 RMFGTFHFRNSENYLKIKPLSLVAPVPWKIDLDEFF--KLLKRKKTAIKKILLDQQIIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K+ P K N + + +++ ++L ++ GGSS+R Y Sbjct: 170 LGNIYVDETLFASKVHPEFKA------NQLSLEQVKLILKNATRILQESTKLGGSSIRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K +PC NCG++I++I GR T++C CQ+ Sbjct: 224 TSLNEKEGSFQNFLQVHTKFNKPC-PNCGELIQKIKLGGRGTYFCKKCQQ 272 >gi|304389334|ref|ZP_07371299.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327452|gb|EFL94685.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 97/331 (29%), Positives = 141/331 (42%), Gaps = 54/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPH--HFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSC-----------------AKPIK 92 K+L L +G L++++HLGMSG +E ++ + Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP------ 146 H V I+L N + +++ D R FG ++L P PEP Sbjct: 121 LLPHERVRITLDNGKD-----LVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGM 175 Query: 147 ---ADNSFNAIYLTHQF----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 A + + T F H +K LL+Q IV+GIGNIY E L+ A++ P Sbjct: 176 EHIARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAP 235 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGK 258 RSL L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ Sbjct: 236 GRSLSDRK------LRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGR 289 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ C CG + +++ GRS+ +C CQ+ Sbjct: 290 GGQSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|145637016|ref|ZP_01792680.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269874|gb|EDK09813.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 191 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 15/204 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + + LR+ + T+ +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLKGAIIEKIVVRQPKLRWMVSEELAQITQ-QKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I+LE +I HLGMSGS ++E +H+H+ I + N + YNDP Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID-----KHDHLDIVVNNGKVVR-----YNDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T ++P LGPEP F++ YL + KK + LK L++ +V G Sbjct: 109 RRFG--AWLWTEKLNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSL 203 +GNIY E L+ L P + +R Sbjct: 167 VGNIYANETLFLCNLHPQKNSREF 190 >gi|26553653|ref|NP_757587.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] gi|26453659|dbj|BAC43991.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] Length = 277 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 141/295 (47%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDI--CLHR--KNLRF-DFPHHFSAATRGKKIIDVS 54 MPELPEV+ + +L N T+T+I + + KN + DF H+ ++I D++ Sbjct: 1 MPELPEVQSVIDSLKEQGCLNRTITNIESIMPKIFKNCSYEDFTHYII----NEQIKDIT 56 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R+ KYL+ L + +VHL M G E T + + +H V I + + Y + Sbjct: 57 RKGKYLIFHLTNDKVFVVHLRMEGKLFFEKTDSSY---DKKHVLVKIEMDD------YEI 107 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 Y+D RRFG + + ++ LG +P + F+ YL + K N +K LL+Q Sbjct: 108 RYHDTRRFGTFTIYNENNYLDSKEIKKLGLDPLEEEFDWKYLKNNIKKSNRAIKTTLLDQ 167 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V+GIGNIY E L+ + + P I N T D K+ + + +L A++ G+ Sbjct: 168 ENVSGIGNIYADEILFASSIHP-----ETIANKLTDND-FKKIAENSRIILAKAVENKGT 221 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ Y G FQ V+ K C+ NC I +I GR T+ C CQK Sbjct: 222 TIATYFFKKEQKGEFQKFLKVHTKKDFDCV-NCKNKIVKIKVNGRGTYLCLKCQK 275 >gi|87120854|ref|ZP_01076746.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] gi|86163692|gb|EAQ64965.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] Length = 216 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 27/238 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + ++N + D+ + + LR+ G+ +I +SRR KY+ Sbjct: 1 MPELPEVETTKRGIQPHLQNQQILDVEIRQAQLRWPITAELVEQVSGQDVISLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++I+HLGMSGS + A H+HV L++ + Y DPR Sbjct: 61 GIHTSTG-TVIIHLGMSGSLYL----VAADTPPLFHDHVDFKLSSGQWLR-----YTDPR 110 Query: 121 RFGFM-----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 RFG + D + SL ++ LGPEP ++FNA YL + K +K +++ K Sbjct: 111 RFGAILWTKEDWLNHSL------IQHLGPEPLSDAFNAAYLAAKAKGKTQAIKTFIMDSK 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + G+GNIY EAL+ A + P R+ + L L+ I+ VL AI+ GG Sbjct: 165 QLVGVGNIYANEALFMAGIKPNRRAGLVSAKR------LTVLVDCIKLVLAQAIEQGG 216 >gi|298346955|ref|YP_003719642.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] gi|298237016|gb|ADI68148.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] Length = 321 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/331 (28%), Positives = 141/331 (42%), Gaps = 54/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPH--HFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGARLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSC-----------------AKPIK 92 K+L L +G L++++HLGMSG +E ++ + Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP------ 146 H + +L N + +++ D R FG ++L P PEP Sbjct: 121 LLPHERLRFTLDNEKD-----LVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGV 175 Query: 147 ---ADNSFNAIYLTHQF----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 A + + T F H +K LL+Q IV+GIGNIY E L+ A++ P Sbjct: 176 EHIARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAP 235 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGK 258 RSL L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ Sbjct: 236 GRSLSDRK------LRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGR 289 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ C CG + +++ GRS+ +C CQ+ Sbjct: 290 GGQSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|218282128|ref|ZP_03488427.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] gi|218216921|gb|EEC90459.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K++++ D+ ++ + + F G+ +R KY Sbjct: 1 MPEAPEVQTVLSTLETQIKDISIEDVLIYYPKIVDNVEVETFKHRLIGQSFRTFNRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + ++VHL M G F + C +H HV L N Y+D Sbjct: 61 LIFGLD-DYDLVVHLRMEGKFYLYDKIC-----EDKHIHVVFKLNNGICMS-----YHDT 109 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + YP + +G + D + +Y H H NLK+ LL+Q I+A Sbjct: 110 RKFGRMYLYSKKEDIHAYPCFKNVGYDYMDQRVDGMYFYHCIHTLKRNLKSCLLDQSIMA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + L P + L + + K++ E +++L A GG+++R Sbjct: 170 GIGNIYADEICFALGLDPRSRACKLSKKDCD------KIVLETRRILQGATHYGGTTIRS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ +T C I++I + R T+ C CQK Sbjct: 224 YTSSLGVTGRFQLHLKVHDQTQ---CKVCHHAIKKITVSQRGTYLCPKCQK 271 >gi|126657399|ref|ZP_01728558.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] gi|126621386|gb|EAZ92098.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] Length = 278 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 45/306 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRF-----DFPHHFSAATRGKKIIDVS 54 MPELPEVE + R L + TV L + L + +F AT G+ Sbjct: 1 MPELPEVETVCRGLNQLTFGQTVRGGKVLLPRTLAYPVSTQEFLEQIQNATFGQ----WQ 56 Query: 55 RRAKYLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 R+ KYLL+ LE + + VHL M+G + P H + L + +++ R Sbjct: 57 RKGKYLLVPLEDDKGWLGVHLRMTGQLLWVQQD------EPLSRHTRLRLFCD-RSQELR 109 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D R FG + V PP L+ LGPEP +F+ Y + + N+ Sbjct: 110 FV--DIRTFGKVWWVPP----HTPPETIITGLQKLGPEPFSKAFSLDYFRDKLKGRQRNI 163 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +VAG+GNIY EAL+++ + P + L Q I+E++ V+I+ Sbjct: 164 KTILLDQSVVAGMGNIYADEALFKSGIRPTTLGKELSQPQ----------IKELRIVMIE 213 Query: 228 ----AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 AI GG++ D+ + G G + VYG+ +PC CG I RI GRS+ + Sbjct: 214 VLKTAIKEGGTTFSDFRGVTGINGNYSGIAWVYGRHNQPC-RVCGTPIERIKLGGRSSHF 272 Query: 284 CTYCQK 289 C CQ+ Sbjct: 273 CPQCQQ 278 >gi|325107647|ref|YP_004268715.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] gi|324967915|gb|ADY58693.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] Length = 279 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 132/295 (44%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKN--MTVTDIC-LHRKNLRFDFP-HHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + D+C RK + T G+ I V RR Sbjct: 1 MPELPEVETMVRGIRQAVAGTRLAAVDLCPCPRKPITLTPGIEELRDRTVGQTITAVERR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK +++ LE ++ M+G ++ A P P +H+ I K+ + + Sbjct: 61 AKRVVLRLESEDCYVIEPRMTGLMLL-----ADP---PTIDHLRIHWQLRDGRKRRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L + L+ LGP+ D + +K ALL+QK+ Sbjct: 113 WDRRGLGTVRLYSPTEYEAALGLQKLGPDALD--MTPALWKDALQRTARPIKVALLDQKL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L +LSP +L + KL + +L AI GS+L Sbjct: 171 VAGIGNLYASEILHAIRLSPETPANTLTAGQ------IRKLHRSCLAILELAIQYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VYGKTGE C I RIVQA RSTFYC CQK Sbjct: 225 GDGTYRNALNKDGSYQNEHRVYGKTGETCPRCQKHSIERIVQAQRSTFYCPRCQK 279 >gi|256372280|ref|YP_003110104.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] gi|256008864|gb|ACU54431.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] Length = 275 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 39/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PEVE +R L ++ T+ I + + L A G+ I+ + R K+L Sbjct: 1 MPEAPEVERVREVLAARVEGATLEGIRMVGRRLVRRHDPELLATVSGRPIVSMRRIGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G +++VHLGM+G ++ S HV + L + ++ + DPR Sbjct: 61 VFDL-GTDALVVHLGMAGRLVVSDASATA-------THVQLVL----DFRRAVITLVDPR 108 Query: 121 RF--GFMDLVETSLKYQYPPLRTLGPE---PADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 F F+D++ T + + L LGP+ P + A L + +K ALL+Q+ Sbjct: 109 TFSEAFVDVLGTDGRPRR--LAGLGPDVFGPEEEI--AASLERHAARSRRAIKTALLDQR 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID----AIDA 231 +VAG+GN+Y E L+R + P TP ++L + + I + D A+ A Sbjct: 165 VVAGLGNMYADETLFRVGVHP-----------STPMNVLGRRLVAIAEAAGDVAREALAA 213 Query: 232 GGSSLRDYVHID--GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D + D G F +VY + G PC ++RR++Q GRS +C CQ+ Sbjct: 214 GGTTFADRAYRDPLDRPGAFGARLAVYQRAGSPCPRCATSIVRRVLQ-GRSAHWCPRCQQ 272 >gi|33862459|ref|NP_894019.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9313] gi|39931227|sp|Q7V8Y5|FPG_PROMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33640572|emb|CAE20361.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9313] Length = 291 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 96/315 (30%), Positives = 139/315 (44%), Gaps = 50/315 (15%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + ++C R F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFQIGQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELEGNLS--------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L ++ VHL M+G F H + + P H V I Sbjct: 61 YLMASLHHEIAQSSADSEPDPDGGWWGVHLRMTGQFQW-HEAISSPCP---HTRVRI--- 113 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAI 154 N K + + D R FG M + PP L+ LGPEP ++FN+ Sbjct: 114 --WNKKNEELRFVDTRSFGQM--------WWVPPGNAPETIITGLQKLGPEPFSSAFNSS 163 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL+ + +K+ALL+Q IVAG GNIY E+L+ A++ P + L K L Sbjct: 164 YLSKRLKGSKRPIKSALLDQSIVAGAGNIYTDESLFAARIRPHTPSGQL------KKVEL 217 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L + +VL +I AGG++ D+ ++G G + VY + G+ C C IRR Sbjct: 218 ERLCNCLTEVLRVSIGAGGTTFSDFRDLEGINGNYGGQAWVYRRGGQAC-RICSTPIRRE 276 Query: 275 VQAGRSTFYCTYCQK 289 GR T +C CQ+ Sbjct: 277 SLCGRGTHWCPNCQR 291 >gi|56750239|ref|YP_170940.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] gi|56685198|dbj|BAD78420.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] Length = 239 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 123/251 (49%), Gaps = 32/251 (12%) Query: 49 KIIDVSRRAKYLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 +I + RR KYLL +L E + VHL M+G F T A P+ +H V + Sbjct: 7 QIQEWRRRGKYLLADLSREGEPAGTWGVHLRMTGQFF--WTEPATPLT--KHTRVRLRFE 62 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + ++ R I D R FG M V + ++ L LGPEP F A YL + + Sbjct: 63 GD---RELRFI--DIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRR 117 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-- 220 +K ALL+Q +VAGIGNIY E+L+R + P TP D L K+ E Sbjct: 118 SQRPIKTALLDQSLVAGIGNIYADESLFRTGIHPT-----------TPSDRLTKIQAEKL 166 Query: 221 ---IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I +VL +I AGG++ D+ + G G + VYG+ +PC CG I+++ A Sbjct: 167 REAIVEVLTASIGAGGTTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLA 225 Query: 278 GRSTFYCTYCQ 288 GRS+ +C CQ Sbjct: 226 GRSSHFCPRCQ 236 >gi|319777154|ref|YP_004136805.1| DNA glycosylase [Mycoplasma fermentans M64] gi|6537224|gb|AAF15568.1|AF179376_3 foramidopyrimidine DNA gycosylase [Mycoplasma fermentans] gi|318038229|gb|ADV34428.1| DNA glycosylase [Mycoplasma fermentans M64] Length = 273 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I LH K ++ F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + +P +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHYK--YRPA--TKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + ++ ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKELF--NKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 273 >gi|124023869|ref|YP_001018176.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9303] gi|123964155|gb|ABM78911.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9303] Length = 291 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 139/315 (44%), Gaps = 50/315 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + ++C R F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLIDFQIDQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELEGNLS--------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L + + VHL M+G F H + + P H V I Sbjct: 61 YLMASLHHDFAQPSADSEPDPDGGWWGVHLRMTGQFQW-HEAISSPCP---HTRVRI--- 113 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAI 154 N K + + D R FG M + PP L+ LGPEP ++FN+ Sbjct: 114 --WNKKDEELRFVDTRSFGQM--------WWVPPGNAPETIITGLQKLGPEPFSSAFNSS 163 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL+ + +K+ALL+Q IVAG GNIY E+L+ A++ P + L K L Sbjct: 164 YLSKRLKGSKRPIKSALLDQSIVAGAGNIYTDESLFAARILPHTPSGQL------KKVEL 217 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L + +VL +I AGG++ D+ ++G G + VY + G+ C C IRR Sbjct: 218 ERLCDCLTEVLRVSIGAGGTTFSDFRDLEGMNGNYGGQAWVYRRGGQAC-RICSTPIRRE 276 Query: 275 VQAGRSTFYCTYCQK 289 GR T +C CQ+ Sbjct: 277 SLCGRGTHWCPNCQR 291 >gi|15828781|ref|NP_326141.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pulmonis UAB CTIP] gi|17366043|sp|Q98QQ1|FPG_MYCPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14089724|emb|CAC13483.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycoplasma pulmonis] Length = 278 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ ++L ++N+ + + L ++ P +F G+KI+ +S K Sbjct: 1 MPELPEVRVVCKSLNEKVQNLVFKKVEIFNPKLFKEYDPSYFQEFLIGEKILKISNLGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + KP + +H N + + Y + Sbjct: 61 IIYFLTNNKIMLSHLRMEGKYSFYE---QKPKETLKHIQAIFYFENGS-----ELHYRES 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + + PL + P + F Y ++ KK +K LL+Q IV+G Sbjct: 113 RPFGTFHIRYLNNYLKIDPLAKVAQSPGEIDFETFY--NRLSKKALAIKPTLLDQSIVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDA----GGS 234 IGNIY E L+ +K+ P TP ++L K ++EI K I+ +D GGS Sbjct: 171 IGNIYADEILFASKIHP-----------ATPSNLLSKDKVKEILKNAIEILDKSTELGGS 219 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+ Y ++ G +QN V+ K GE C+ C I +I GR T++C CQK Sbjct: 220 SINSYESLNKKEGQYQNFLKVHTKKGEFCIK-CSSKIEKIKFKGRGTYFCPTCQK 273 >gi|238810071|dbj|BAH69861.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 274 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I LH K ++ F + +DV+ AK+ Sbjct: 2 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + +P +H+++ L +N+ + YND Sbjct: 62 IIFSLTNNKYLLSHLRMSGKYFTHYK--YRPA--TKHDYLIFHLDDNSC-----IYYNDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ + ++ ++ KN +K LL+Q V+G Sbjct: 113 RQFGTFHIKTKGTLYTTKPLDKVAKIPSETNIKELF--NKIKNKNIPIKQLLLDQSFVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ L K+I+ K++ A + GGSS+ Y Sbjct: 171 IGNIYANETLFATQINPLTPSKNITFEQ------LEKIIKAAAKIMDQATELGGSSIDTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 225 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 274 >gi|313807891|gb|EFS46372.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA2] Length = 256 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 128/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LLNQ Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLNQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|331703660|ref|YP_004400347.1| formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802215|emb|CBW54369.1| Formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 274 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ ++ II HL M+G ++IE++ K+ + L NN + Y D Sbjct: 61 IVIELKEHV-IISHLRMTGKWVIENSDQYAYKKSWLR--AELLLDNNLVFRFY-----DM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTSANLITKDQTNQIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHMNNKNCKI--CDTKISKIKVNGRGTYYCSKCQ 273 >gi|269957059|ref|YP_003326848.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269305740|gb|ACZ31290.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 339 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 63/340 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V ++ + R + P F++ G + +RR Sbjct: 1 MPELPEVETVRDGLARHVVGARVREVEVLRDYSVRRQDGGPSAFASLIEGATLTAAARRG 60 Query: 58 KYLLIELEG------------------------------NLSIIVHLGMSGSFIIEHTSC 87 K+L + L +++ HLGMSG ++ Sbjct: 61 KFLWLPLAAAPVVEPVETTPLDPAGVVSTGSTTDAGSTTRTALLAHLGMSGQLLVRDGR- 119 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM---------DLVETSLKYQYPP 138 P +P H V + LT T + + D R FG + D L P Sbjct: 120 -DPWAHP-HLRVRLHLTG-APTGATALDFVDQRTFGHLAVVGLVPTPDGAPGGLGTDEPA 176 Query: 139 LRT---------LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + L PE A + + ++ + +K ALL+Q +V+GIGNIY EAL Sbjct: 177 VPGPVAHIARDLLDPELAPGTPGRAAVIAAVRRRRTGIKRALLDQTLVSGIGNIYADEAL 236 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGY 248 WRA++ R T L P ++ +++ + V+ +A+ GG+S YV+++G GY Sbjct: 237 WRARVHYARATDVL-----RPVEV-ARVLDAAEDVMREALAVGGTSFDTLYVNVNGESGY 290 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F + YG+ GEPC CG I R RS +C CQ Sbjct: 291 FARGLAAYGRAGEPC-PRCGTPIVRDTFMNRSAHWCPRCQ 329 >gi|218887537|ref|YP_002436858.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|122891668|dbj|BAF45151.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758491|gb|ACL09390.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 336 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 18/218 (8%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VHL M+G + A H V L + R+ ++D R+FG++ + + Sbjct: 135 VHLKMTGRLFVYGPEVAPNT----HTRVVFGLDDGN-----RLFFDDARKFGYVRALSDA 185 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 + R+LGPEP + A F + +K LL+Q ++AGIGNIY E+L+R Sbjct: 186 DLATWDFWRSLGPEPLE--IAAPDFAALFRGRRGRIKALLLDQTVIAGIGNIYADESLFR 243 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P + L L L + VL ++I GSS+RDY G G FQN Sbjct: 244 ASIRPDAQAGELSPER------LCVLHGHLVDVLRESIAECGSSIRDYRDAHGDAGAFQN 297 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 F VYG++G+PC++ CG+ + AGR+T +C CQK Sbjct: 298 RFRVYGRSGQPCVA-CGRALTTGKVAGRTTVFCERCQK 334 >gi|226315118|ref|YP_002775014.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|226098068|dbj|BAH46510.1| putative formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 268 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + T+T + R+ P F+ + ++ V RR K+L Sbjct: 1 MPELPEMENYRRLLQEKIGGGTITATHVQREKTINLPPAEFARLLQDNRLTLVDRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LE +++HL M G F+ ++ K + Q VT+S R++Y Sbjct: 61 LFHLESGHVLLLHL-MLGGFLYLGSAEDKLKRTAQ---VTLSFGE-------RLLYFHGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ T+++ L LGPEP D F T K S LK AL+NQ +AGI Sbjct: 110 RLGYLHLL-TNVQID-ERLAPLGPEPLDPLFTFTRFTELLADKRSVLKTALVNQHWLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P R +L +L +Q VL +AI GG ++ Sbjct: 168 GNCYADEICFHAAILPTRTIPTLSLEEQK------RLYHSMQTVLTEAIRFGG-YMQPLF 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY + GEPC CGQ I + + R F C CQ Sbjct: 221 QGDSLTGGFDERCQVYDRGGEPC-PRCGQPIEKSELSSRKVFACANCQ 267 >gi|313825875|gb|EFS63589.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] Length = 256 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL + L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWLILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|163840518|ref|YP_001624923.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162953994|gb|ABY23509.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 308 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 39/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L ++ T+ ++ L +++R F A G +I VSRR Sbjct: 1 MPELPEVEVVRRGLQKLVVGRTIENVQVLDPRSIRRHLLGVEDFRAQLAGNRIGSVSRRG 60 Query: 58 KYLLIEL----EGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L + L +G+ +++ HLGMSG +++ A + +H V I + + Sbjct: 61 KFLWLSLFYPADGHATGTALVTHLGMSGQMLMQDPEHA----DEKHLKVRIDFGPDDDLA 116 Query: 111 KYRVIYNDPRRFGFM---DLVETS------LKYQYPPLRT----LGPEPADNSFNAIYLT 157 K + + D R FG M +LV T+ L P + + +P D +F+ Sbjct: 117 K-ELRFVDQRIFGGMFVSELVPTADGLPGGLGDDQPWIAAEAAHIAKDPLDPNFSLSDFA 175 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q ++G+GNIY E+LW + L L L +L Sbjct: 176 NLLKGSKIGIKRVLLDQARISGVGNIYADESLWASSLHYATPAGQLSFTQ------LDEL 229 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIR 272 I+ ++KV+ ++ GG++ YV+++G+ GYF+ + +VYG+ +PC + +IR Sbjct: 230 IRNVRKVMEASLAVGGTTFDSLYVNVNGASGYFERSLNVYGRENKPCYRCQDNGLLTLIR 289 Query: 273 RIVQAGRSTFYCTYCQ 288 R RS++ C CQ Sbjct: 290 RAPFMNRSSYLCPVCQ 305 >gi|289428678|ref|ZP_06430361.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|295130990|ref|YP_003581653.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|289158076|gb|EFD06296.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|291377097|gb|ADE00952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|313773587|gb|EFS39553.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313811638|gb|EFS49352.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313822218|gb|EFS59932.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823549|gb|EFS61263.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313831379|gb|EFS69093.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834991|gb|EFS72705.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|314924612|gb|EFS88443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314962024|gb|EFT06125.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314974254|gb|EFT18350.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976741|gb|EFT20836.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314978881|gb|EFT22975.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314984442|gb|EFT28534.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|314986460|gb|EFT30552.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990819|gb|EFT34910.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315081315|gb|EFT53291.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315083516|gb|EFT55492.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087197|gb|EFT59173.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089370|gb|EFT61346.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|315095394|gb|EFT67370.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|327328344|gb|EGE70106.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327329790|gb|EGE71546.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|327444128|gb|EGE90782.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444992|gb|EGE91646.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327446475|gb|EGE93129.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] gi|328752231|gb|EGF65847.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|328760096|gb|EGF73675.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] gi|332675869|gb|AEE72685.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 256 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L V+ + + + + LR + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|253317168|ref|ZP_04840381.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 187 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 18/197 (9%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H HV L+N+ ++IY+D RRFG + V + YP + PEP N Sbjct: 7 KHWHVIFELSNDK-----KLIYSDIRRFGEIRNVASVA--SYPSFLEIAPEPFTNEALTY 59 Query: 155 YLT--HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 YL HQ KN +K +L+ K++AG GNIY CEAL+RA + P +K + L ++ Sbjct: 60 YLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQ---QE 116 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 +++ ++E VL + I GG+S+ DY H DG G Q +VY +P CG I Sbjct: 117 MVFYYVRE---VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY---KQPVCKVCGSQIE 170 Query: 273 RIVQAGRSTFYCTYCQK 289 + A R++ YC CQK Sbjct: 171 TKIIATRNSHYCPVCQK 187 >gi|319653434|ref|ZP_08007534.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317394918|gb|EFV75656.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 269 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + +TD+ ++R+ P + +I +++RRAK+L Sbjct: 1 MPELPEMETYRRLLTEQLARKVITDVEVNREKSINVQPAQLKSQLINAQITEITRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 + +L ++++HL + G I + + NP V IS + + +Y Sbjct: 61 IFKLSSGKNLLLHLMLGGWMYIGNEA-----DNPDRTKQVIISFGD-------KKLYFIG 108 Query: 120 RRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G++ L+ +T ++ + L LGPEP + + + LK +NQ+ ++ Sbjct: 109 LRLGYLHLLTDTEVEKE---LSDLGPEPLGQTLGFPAFRERLGSRRGMLKTTFINQQFLS 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E + A L P+RK L +D + L Q ++ VL AI GG Sbjct: 166 GIGNCYSDEICFEAGLLPMRKADEL------DEDEIKILYQSMKGVLTRAIQFGGYMEEP 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GEPCL C I + + R TFYC CQ Sbjct: 220 LFKGDAKTGGYNEQCRVYDREGEPCL-RCSSPIVKEEISSRKTFYCANCQ 268 >gi|256384331|gb|ACU78901.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385164|gb|ACU79733.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455864|gb|ADH22099.1| DNA-formamidopyrimidine glycosylase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 274 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL+ ++ II HL M+G ++IE++ K+ + L NN + Y D Sbjct: 61 IVIELKEHV-IISHLRMTGKWVIENSDQYAYKKSWLR--AELLLDNNLVFRFY-----DM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N +D ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTSANLITRDQTNEIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHMNNKNCKI--CDTKISKIKVNGRGTYYCSKCQ 273 >gi|255622364|ref|XP_002540275.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223497337|gb|EEF22108.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 223 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 78/113 (69%), Gaps = 8/113 (7%) Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++VAG+GNIYVCEAL+R+ + P +++ + L KL+ I++VL ++I Sbjct: 2 LLDQQVVAGLGNIYVCEALFRSAIRPDKESGRVTL------PALKKLVPAIREVLSESIA 55 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 AGGS++RDY G +GYF ++ VYG+ G+PCL CG +RR VQ GRSTF+ Sbjct: 56 AGGSTIRDYAQPSGELGYFATSWQVYGREGQPCL--CGGTVRRFVQGGRSTFW 106 >gi|313819676|gb|EFS57390.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] Length = 256 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 24/269 (8%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L V+ + + + + LR F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPRGGLAGAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + + R + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVSTQHA------PQHRHTRIVITLD-DGRDLRFL 113 Query: 116 YNDPRRFGFMDLVETSLKYQYP-PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L L P P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 114 --DQRTFGGLTLA--PLVDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+ Sbjct: 170 TLVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 S YV+++G G+F YG+ EP Sbjct: 224 SFDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|89100042|ref|ZP_01172912.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] gi|89085276|gb|EAR64407.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] Length = 275 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R+ L + + +T+ ++R+ P F + I + RRAK+L Sbjct: 7 MPELPEMETCRQLLGRQLTGLMITEAEINREKSINVPPAEFIRQVQNSTITSIDRRAKHL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 + L ++++HL + G + + NP V +S + R +Y Sbjct: 67 IFRLSSGKNLLLHLMLGGWMYLGNDE-----DNPDRTKQVILSFGS-------RKLYFIG 114 Query: 120 RRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G++ L+ L+ ++ LGPEP D F A KK LK +L+NQ +A Sbjct: 115 LRLGYLHLLTAQELEKEF---EELGPEPLDPGFTAASFAQLLEKKRGMLKTSLVNQHFIA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E +A L P+RK L + + +L ++ V +AI +GG Sbjct: 172 GIGNCYSDEICHQAGLLPMRKIEELSEMEKS------RLYPAMKTVFANAIQSGGYMDEP 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE CL CG I + + R TFYC CQ Sbjct: 226 LFKGDLITGGYNERCMVYDRKGESCL-RCGSQIVKEEISSRKTFYCPGCQ 274 >gi|269115161|ref|YP_003302924.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis] gi|118406894|gb|AAO39419.2| foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] gi|268322786|emb|CAX37521.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] Length = 275 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ + L + N +T++ +++ + +F P +F + R KKI + K+ Sbjct: 1 MPELPEVRVVVKALNNTILNKKITNLIIYKPKIFKEFSPQYFISILRDKKIEKIDNIGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + P + +H ++N+ + + D Sbjct: 61 IIFFLSEKLVLLSHLRMEGKY---RYYLNPPKEIDKHLVARFVFSDNS-----ELHFLDK 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG L + PP+ LGPEP D A++ + +K LL+Q VAG Sbjct: 113 RLFGTYMLRNLENYNKIPPISLLGPEPKDIDIEALF--KKIKNSKMPIKTKLLDQSFVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ +K+ P+ K L L +I+ +++ + + GG++L Y Sbjct: 171 IGNIYADEALFASKIHPLSKASDLSLEQ------LKDIIKNANEIMEKSYELGGTTLFSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G +Q+ +++ + + C CGQ ++ R T+ C CQK Sbjct: 225 ESLNKQEGKYQDFLNIHSDSIKKC-KVCGQKTLKLKVNQRGTYVCPNCQK 273 >gi|260578983|ref|ZP_05846885.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] gi|258602848|gb|EEW16123.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] Length = 216 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 44/239 (18%) Query: 72 VHLGMSGSFIIEHTSCAKP--IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +HLGMSG ++ A+P +++P H + L++ + + D R FG E Sbjct: 1 MHLGMSGQMLV-----AEPGQVQSP-HVRIRAGLSDGRE-----LCFVDQRTFG-----E 44 Query: 130 TSLKYQYPPLRTLGP------------------EPADNSFNAIYLTHQFHKKNSNLKNAL 171 L+ P +G +P + +F+A + K + +K L Sbjct: 45 WRLEKAVPDPWAVGAGVASPKNFLPQNVSHISADPLEPAFDAQAAVERMKSKRAAVKMVL 104 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 LNQ++V+GIGNIY EAL+ A + P R++ +L+ + L++++Q +V+ A++ Sbjct: 105 LNQEVVSGIGNIYADEALFLAGVRP-RRSAALLS-----RPTLHRVLQSAAEVMERALEQ 158 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G+ GYF + +VYG+ GE C CG I+R+V GRST YC CQK Sbjct: 159 GGTSFDSLYVNVNGASGYFSRSLNVYGRGGEAC-KRCGAPIKRVVVGGRSTHYCATCQK 216 >gi|108805235|ref|YP_645172.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] gi|108766478|gb|ABG05360.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE +I ++ + V + R ++ P FS RG+ + RR K + Sbjct: 1 MPELPETTVISEDIRRLAAGRRVLRAEVFRPDVTNVPPEEFSGRLRGRVLEGTGRRGKLI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G + + VHL +SG ++ + +P + N + ++ Sbjct: 61 VLDFGGVVGL-VHLVISGR-VLRLPAWTEPDR---LNTAVLEFEGGPVLSFAKLW----- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G+ L E ++P L LGP+P F YL ++ + +K LL+Q +VAG+ Sbjct: 111 -LGYFHLYEPERVGEHPLLARLGPDPFSEGFTPGYLARA-FRRRAAVKGLLLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ A++ P+R+ +L + + + +K+L AI+ G++ Y Sbjct: 169 GNIYVDEVLFAARVHPLRRADTLSEEE------IRAIHAATRKILRRAIELRGTTFDSYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q V+ + G+PC S CG I ++ AGR T C CQ Sbjct: 223 DAFGESGGYQRELRVFARAGKPCPS-CGARIAKLRVAGRGTHVCPACQ 269 >gi|149180839|ref|ZP_01859341.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] gi|148851358|gb|EDL65506.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] Length = 270 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPE+E + L + N ++++ + R+ N+ D F+ + + I V+RRA Sbjct: 1 MPELPEMENYKNLLSERILNKQISEVEIGREKSINVPVD---EFTHLVKNRTIKKVTRRA 57 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+LL L+ ++ +++HL M G ++ + KP + + I L+ +Y Sbjct: 58 KHLLFHLDNDVVLLLHL-MLGGWMFYGSEQEKPDRT-----IQIRLSFGIQH-----LYF 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R G++ L + L L LGPEP F+ K+ +LK L+NQ+ + Sbjct: 107 IGLRLGYLHLYK-DLDEAAKELDDLGPEPITPPFSVEQFLDLAGKRRGSLKTTLVNQRFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E + A + P RK L Q+ +L Q +Q +L DAI +GG Sbjct: 166 AGIGNCYSDEICFHAAIMPGRKFNELSQHETR------QLFQSMQFILNDAIASGGYMEE 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC+ CG I + + + TFYC CQK Sbjct: 220 PLFPGDNLTGGYNSKCRVYDREGEPCI-RCGSQIIKDKISSKKTFYCGNCQK 270 >gi|251796642|ref|YP_003011373.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] gi|247544268|gb|ACT01287.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] Length = 271 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L ++ +T + R F A G+ I V RR K+L Sbjct: 1 MPELPEMEHYRLRLSELIIGSPITGTEVTRDKSINISAEQFEAELVGRTIWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ +++HL + G+ + +P + Q VTI +Y Sbjct: 61 LFHLDNGKRLVLHLMLGGTLFF-GSEEERPDRTVQ---VTIRFATGN-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + S+K L LGP+P D +F+KK LK AL++Q +++GI Sbjct: 110 RLGYLHFM--SVKEADAKLSELGPDPFDKRLTLERFKARFNKKRGALKTALVDQHVLSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + AK+ P K SL + ++ + + VL +AI GG + Sbjct: 168 GNCYADEIAFAAKIRPDAKIPSLTD------ETWERVYESMHSVLKEAISKGGYMEQPLT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC CG I + + R F C CQK Sbjct: 222 AGDAITGGYNDHCQVYDRGGEPCFV-CGTAIEQFEISSRKAFVCPVCQK 269 >gi|193216889|ref|YP_002000131.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] gi|193002212|gb|ACF07427.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] Length = 275 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+++ L + N ++ + + H K R P F G+ I +++ R K+ Sbjct: 1 MPELPEVKVVISALKKHILNKKISALEIYHAKLFREHKPEVFIKKLAGRTIKNITNRGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I L+ +L ++ HL M G + + + P+ N +H+ ++ + Y D Sbjct: 61 IIIFLDDDLILLSHLRMEGKYRY-YEANNLPLAN---DHLIAKFIFEDQSELH---YLDS 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L T + PL + EP + N L ++ + +K LL+Q++VAG Sbjct: 114 RRFGTFHLRTTEDYNKILPLSKIAAEP--DKINVELLWNKIKSSTTPIKTKLLDQELVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A+++P S + + + K L K+I+ K++ D+ + GG++L Y Sbjct: 172 IGNIYADEALYCAQVNP-----STLAKDVSLK-TLDKIIKCAAKIMKDSFEKGGTTLFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +QN V+G C C I +I R T++C CQ Sbjct: 226 ESLNKQEGQYQNFLKVHGDRIRFC-PTCKSKIIKIKVNNRGTYFCPKCQ 273 >gi|153003174|ref|YP_001377499.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026747|gb|ABS24515.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 276 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + I K R P F+ G + + R Sbjct: 1 MPELPEVEIAARNLRRWTMGRRIERIEPDPKARYVFRPATPTAFARGLEGARFGPIRRIG 60 Query: 58 KYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ ++ + + ++ HLGM+G ++ A + + L + Sbjct: 61 KHLLVSMKKDGAPVGLLAHLGMTGKWLRREGDAAPS----RFSRARFHLDDGAVLH---- 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++D R FG + +V + + + LGP+P + + L + +K +++Q Sbjct: 113 -FDDMRLFGRLRVVPGARFEEVREIAELGPDPLEQGIDLDRLAEALGRSRLAVKVRIMDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++ G+GNI E+L+ AK+ P R+ RSL TP ++ KL I + + I S Sbjct: 172 ALLPGVGNIVASESLFLAKIDPRRQARSL-----TPAEV-RKLADGILATVKETIAREDS 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV GS +N F VY + GE C I R+VQA RST+YC CQ+ Sbjct: 226 PEISYVEEPGS----ENPFLVYAREGERCPRCRRAEIVRVVQAQRSTYYCPRCQR 276 >gi|229543047|ref|ZP_04432107.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] gi|229327467|gb|EEN93142.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] Length = 267 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 24/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPE+E + L ++ T+T+ + R+ + P F A +KI +SR AKY Sbjct: 1 MPELPEMETYKTWLASLIGGRTITNAMIQREK-SINIPAGKFMKAVTNQKIQSISRCAKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +LE +++HL M G ++ KP + Q + +S + R ++ Sbjct: 60 LIFQLENGSCLLLHL-MLGGWMFFGKEEDKPDRTIQ---IQLSFGD-------RHLFFIG 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G++ L+ T Q +GPE D F L + ++ LK L NQ+++AG Sbjct: 109 LRLGYLHLL-TPEAVQ-AEFEKIGPELLDLHFTLAVLQQRMQQRRGILKTVLTNQEVLAG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A+L P +K L L +L + I+ +L I+ GG Sbjct: 167 IGNRYSDEILWHAQLRPDQKAGHLDNQQ------LARLYESIRFILQKGIEQGGYMEHPL 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q V+G+ EPC C IR+ + T++C YCQ Sbjct: 221 HKGDGKTGCYQ--MYVHGREDEPC-PRCSTPIRKKEISSHKTYFCPYCQ 266 >gi|145628226|ref|ZP_01784027.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144980001|gb|EDJ89660.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 187 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 14/180 (7%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H+H+ I + N V YNDPRRFG + T ++P LGPEP F++ Sbjct: 16 KHDHLDIVVNNGK-----VVRYNDPRRFGAW--LWTEKLNEFPLFLKLGPEPLSEEFDSD 68 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL + KK + LK L++ +V G+GNIY E L+ L P + SL K Sbjct: 69 YLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLT------KAQC 122 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L+++I++VL +AI GG++L+D++ DG GYF VYG +PC CG R+ Sbjct: 123 GQLVEQIKQVLSNAIQQGGTTLKDFLQPDGHPGYFVQELRVYGNKDKPC-PTCGTKNRKF 181 >gi|149173447|ref|ZP_01852077.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] gi|148847629|gb|EDL61962.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] Length = 282 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI--CLHRKNLRFDFPHHFSAATRG--KKIIDVSRR 56 MPELPEVE + R + ++ + D C P S T+ + + V RR Sbjct: 1 MPELPEVETMVRGIREAVEGRKIKDFRNCPCPCKPISMKPGIKSIRTKALNQTVTSVRRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK ++++LE S ++ M+G ++ P H+ + T + + Sbjct: 61 AKRVILDLENGYSFVIEPRMTGLMLLSDP--------PDTGHLRLEWTLQKGRSSRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L+ + + LGP+ + + N L + K + +K ALL+QK+ Sbjct: 113 WDRRGLGTVQLLSRKEQELVLGPQKLGPDALEITANE--LKQRLAKTSRAIKVALLDQKM 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L ++++ P R L + L + +Q++L AI GS+L Sbjct: 171 VAGIGNLYASEMLHQSRIHPERTADQLSTAE------IRSLHKAMQQILKTAIRYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D Y + G +QN VYG+ + C S G I RIVQA RSTF+C CQ Sbjct: 225 GDGTYRNALNQSGGYQNQHQVYGQEEKNCPSCKGAQIVRIVQAQRSTFFCPCCQ 278 >gi|301166437|emb|CBW26013.1| formamidopyrimidine-DNA glycosylase [Bacteriovorax marinus SJ] Length = 270 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 135/295 (45%), Gaps = 31/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ L +M + C K + H G+KII V R+ K L Sbjct: 1 MPELPEVETIKNQLNEIMPIKVLE--CTQSKVI--SGIAHTPIELSGRKIIAVHRKGKLL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 EL+ N ++ HLGM+G + I P +HNH+ I K + Y DPR Sbjct: 57 YFELDKNEFLLSHLGMTGGWRIGKEKPTDP-NGVKHNHLCI------KHKGGYLSYVDPR 109 Query: 121 RFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKI 176 RFG M D ++T K L LG + D ++ YL+ K N +K LL+QK+ Sbjct: 110 RFGHMYQLDKLQTQEK-----LDELGVDLKDKAYTPEYLSTTIKKYPNRQIKVHLLDQKL 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 AG GN V E RA + P R+ +SL KD + K+ + V+ A GG++ Sbjct: 165 YAGTGNYIVNEICARAGVRPTRRNKSLT------KDEIIKMHKATAVVIDGATQTGGTTF 218 Query: 237 R-DYVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + Y GS G V Y K + C ++++ A R T+YC CQK Sbjct: 219 QGGYADTTGSKGNGVGHLVVFYQKICQLCHET---PVKKLYLAQRGTYYCPKCQK 270 >gi|13508119|ref|NP_110068.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|2494594|sp|P75402|FPG_MYCPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1674146|gb|AAB96105.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|301633660|gb|ADK87214.1| DNA-formamidopyrimidine glycosylase [Mycoplasma pneumoniae FH] Length = 277 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 24/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + +H K L+ + A +D+ RR KY Sbjct: 1 MPELPEVATVITELKSCVLNKPVKQVKVHLDKVLKNTNVKQLNDALVNHSFVDIKRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E + NHV + ++ Y+D Sbjct: 61 IIFCLSNGLFLVSHLRMEGKYFFEAKGSQFDL-----NHVLVEFLFQDGD---QLNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGP---EPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R+FG L +YQ+ R L +P D FN + ++ HK N +K +L+Q Sbjct: 113 RQFGTFHLFN---RYQFENARELNKLALDPLDQEFNHQAIFNKGHKSNKKIKTFILDQTN 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVLIDAIDAGGSS 235 ++GIGNIY E L+ +K+ P +L +N + Y+LI Q +L A++ G++ Sbjct: 170 ISGIGNIYADEILFASKIHP----ETLAKNLNLSQ---YQLICQNATDILKKAVEMKGTT 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G +Q+ ++GK G+ C S +I++ + GR ++ C CQ Sbjct: 223 IGTFTFKKDHTGGYQHFLKIHGKKGKQCQSCNTTIIKKKIN-GRGSYICEKCQ 274 >gi|329947034|ref|ZP_08294446.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] gi|328526845|gb|EGF53858.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] Length = 351 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 70/346 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + L + LR F G+ + V RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTGVEVLDPRPLRRQDGGVRAFVDQLTGRTVTAVVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-------------------------KPIK 92 K+L + L+ ++ HLGMSG ++ TS A +P+ Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTSPAAASDRDPAIRSAAAFLVDPDTRLGRRPVD 120 Query: 93 ---------------NPQHNHVTISLTNNTN---TKKYRVIYNDPRRFGFMDLVETSLKY 134 +P+H V + L+++ + T + D R G + +V+ + Sbjct: 121 LSATERPRYVRDISASPRHLRVRVHLSSDPSADGTDGAVLDLVDQRMLGGLHVVDLTPTV 180 Query: 135 QYPPLRTLGPEP---ADNSFNAIYL-------------THQFHKKNSNLKNALLNQKIVA 178 P PEP AD + A L + +K LL+Q +V+ Sbjct: 181 DGAPGGAGSPEPLLPADATHIARDLLDPALELAGPTGVVARVRASRRAIKTLLLDQGLVS 240 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW A + +R +L ++ ++++ +V+ A++AGG+S Sbjct: 241 GIGNIYADEGLWEAGVHGLRLGTALDTR------VVARILEATAEVMRRALEAGGTSFDA 294 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 YV ++G+ G+F YG+ G+ C CG + R GRS Y Sbjct: 295 LYVDVEGASGFFARELGAYGRQGQAC-RRCGTTMLREALGGRSHTY 339 >gi|88807777|ref|ZP_01123288.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] gi|88787816|gb|EAR18972.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] Length = 200 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 12/201 (5%) Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPA 147 P + H + L N + + + + D R FG M V ++ L+ LGPEP Sbjct: 9 PTQTDPCRHTRVRLWNE---QGHELRFVDMRSFGEMWFVPQNVPIDSVITGLQRLGPEPF 65 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 FNA YL + +K ALL+Q +VAG GNIY E+L+ + ++P RK L Sbjct: 66 SEEFNATYLQQKLRGSTRTIKAALLDQAVVAGAGNIYADESLFASGIAPHRKAGELRLAE 125 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 L +L + VL +I AGG++ D+ ++G G + SVY +TG+PCL C Sbjct: 126 ------LERLCISLVHVLEISIGAGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPCLV-C 178 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 G I R GRS+ +C+ CQ Sbjct: 179 GNPIERKRLGGRSSHWCSECQ 199 >gi|89896847|ref|YP_520334.1| hypothetical protein DSY4101 [Desulfitobacterium hafniense Y51] gi|89336295|dbj|BAE85890.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 272 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE+PE+E + L ++ K + T+I R N+ D F + I V R Sbjct: 1 MPEIPEMETYKNYLQRSVLGKRIVGTEITRARSTNVPTD---EFVRWVQDTSIEQVLRYG 57 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL++ L ++ H+ + G E +P++ P +H+ + +++ +++ Sbjct: 58 KYLILALSSGKALCAHMMLDGRMYYE--VAGEPVELPGRSHIRLKFADHS------ILHF 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R G++ L+E S Q ++ LG +P D F+ K +K L++QK Sbjct: 110 CDLRLGYLKLLEPS---QVDAIKEGLGLDPLDAEFSLAAFLKILSGKRGMIKPLLMDQKN 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++GIGN Y E L+ A + P RKT +L K+ LY +I ++ L I GG Sbjct: 167 ISGIGNAYANEILFAAGILPERKTPTLTDGE---KERLYGVIPDL---LQQGIAKGGYIE 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D G F VY +TG+PCL CG+ I++ + GR+ +YC CQ Sbjct: 221 EPFAPWDKLSGGMIPHFKVYDRTGQPCL-QCGEPIQQKIVGGRNAYYCLTCQ 271 >gi|219667324|ref|YP_002457759.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] gi|219537584|gb|ACL19323.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] Length = 272 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE+PE+E + L + + K + T+I R N+ D F + I V R Sbjct: 1 MPEIPEMETYKNYLQLSVLDKRIVGTEITRARSTNVPTD---EFVRWVQDTSIEQVLRYG 57 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL++ L ++ H+ + G E +P++ P +H+ + +++ +++ Sbjct: 58 KYLILALSSGKALCAHMMLDGRMYYE--VAGEPVELPGRSHIRLKFADHS------ILHF 109 Query: 118 DPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R G++ L+ S Q ++ LG +P D F+ + K +K L++QK Sbjct: 110 CDLRLGYLKLLAPS---QVDAIKEGLGLDPLDAEFSLAAFLNILSGKRGMIKPLLMDQKN 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++GIGN Y E L+ A + P RKT +L +D LY +I ++ L AI GG Sbjct: 167 ISGIGNAYSNEILFAAGILPERKTPTLTDGE---RDRLYGVIPDL---LQQAIAKGGYIE 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D G F VY +TG+PCL CG+ I++ GR+ +YC CQ Sbjct: 221 EPFASWDKLSGGMIPYFKVYDRTGQPCL-QCGEPIKQKTVGGRNAYYCLTCQ 271 >gi|643609|gb|AAA61988.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 181 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 15/193 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + T + L LGPEP + FN YL + KK + +K L++ K+V G Sbjct: 109 RRFGAW--LWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVG 166 Query: 180 IGNIYVCEALWRA 192 +GNIY E+L+ A Sbjct: 167 VGNIYASESLFAA 179 >gi|304404451|ref|ZP_07386112.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] gi|304346258|gb|EFM12091.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] Length = 271 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + T+T + R+ P F A G+ + V RR K+L Sbjct: 1 MPELPEMETYRNMLSERIAGRTITAASVTREKTVNLNPDEFVQALIGRVVWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ I++HL + GS +P + Q V +S + ++ Sbjct: 61 LLHLDDGRRIVIHLMLGGSLYYGDEE-DRPDRTVQ---VELSFGAHK-------LFGIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + K LGPEP D F K LK++L++Q +AGI Sbjct: 110 RLGYVHLL--TAKEAIERFEELGPEPLDPRLTVDKFKLLFKGKRGALKSSLVDQHTIAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAIDAGGSSLRDY 239 GN Y E + A + P + +L KD + +L + +Q VL +A GG + Sbjct: 168 GNCYADEICFVASIRPSTRIPAL-------KDEEWERLFRAMQSVLREATANGGYMEDPF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GEPC + CG I + + + FYC CQ Sbjct: 221 YKGDTLTGGFNSLCRVYDRGGEPC-TQCGTAIVQAEVSSKKVFYCPSCQ 268 >gi|87312113|ref|ZP_01094219.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] gi|87285209|gb|EAQ77137.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] Length = 281 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 142/297 (47%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ ++ VTD+ C R L F T +++ + R Sbjct: 1 MPELPEVETMRRGILSIIGG-KVTDVAKPPCARRPILLAPGIAAFRRRTVDRRVTAIDRV 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K ++I LEG I++ M+G ++ A P P H+ ++ + +V + Sbjct: 60 GKRVVIVLEGGDRIVLEPRMTGLVLV-----ADP---PTREHLRWEMSL-ADCGVEKVWF 110 Query: 117 NDPRRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R G + L E ++ +GP+ S+ L + K +K ALL+QK Sbjct: 111 WDRRGLGSVRLFSEREFVAEFSESGKIGPDALVISWQE--LRDRLAKSRRAVKVALLDQK 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GN+Y E L AK+ P +L + K I ++ VL +AI GS+ Sbjct: 169 GVCGVGNLYAAELLHVAKVHPATPCEAL--STAAWKRIHAAMVD----VLQEAIKYEGST 222 Query: 236 LRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-IRRIVQAGRSTFYCTYCQK 289 L D Y + G +QN VYG+ GE C CG++ + RIVQA R+TFYC CQK Sbjct: 223 LGDGTYRNALNKDGGYQNCHRVYGREGELC-RTCGKVEVIRIVQAQRATFYCERCQK 278 >gi|209526485|ref|ZP_03275012.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] gi|209493120|gb|EDZ93448.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] Length = 288 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 49/262 (18%) Query: 55 RRAKYLLIELEGNLS---------------------IIVHLGMSGSFIIEHTSCAKPIKN 93 RR KYLL +L+ + VHL M+G + + Sbjct: 40 RRGKYLLAQLQAPSQPSNPIFTSKDPIETKTSDGGWLGVHLRMTGQLLWLTSD------Q 93 Query: 94 PQHNHVTISL-------TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 P H H + L + + + I+ P MD++ LR LGPEP Sbjct: 94 PLHKHTRVRLFLQGERELRFVDQRTFGKIWWVPPGMAVMDVISG--------LRELGPEP 145 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + F+ YL ++ + +K ALL+Q I+AG+GNIY EAL+ A + P +R L + Sbjct: 146 LSDEFSPEYLANKLRLRQRPIKTALLDQAILAGLGNIYADEALFLAGIQPTTPSRRLSE- 204 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 D + +L I +VL +AI +GG+++R+++++ G G + + VY + G+PC Sbjct: 205 -----DQVNRLCTHIVEVLQEAIASGGTTIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RV 258 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 C I +I +GR T +C CQ Sbjct: 259 CQTPIAKIKLSGRGTHFCPRCQ 280 >gi|116075002|ref|ZP_01472262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] gi|116067199|gb|EAU72953.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] Length = 200 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 95/189 (50%), Gaps = 19/189 (10%) Query: 113 RVIYNDP--RRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQF 160 RV + DP R F+D+ + PP L+ LGPEP + FN YL + Sbjct: 19 RVRFWDPEGRELRFIDMRSFGEMWWVPPGDPLESVITGLKKLGPEPFSDDFNGGYLKQRL 78 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++K ALL+Q +VAG GNIY E+L+ A ++P L L +L Sbjct: 79 KNSKRSIKAALLDQSLVAGAGNIYADESLFAAGIAPHTAAGQLKLAQ------LNELCAC 132 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + VL +I AGG++ D+ ++G G + SVY +TG PCL+ CG I R AGRS Sbjct: 133 LVDVLQKSIGAGGTTFSDFRDLEGVNGNYGGQASVYRRTGSPCLA-CGTPIVRDKLAGRS 191 Query: 281 TFYCTYCQK 289 T +C CQ+ Sbjct: 192 THWCPNCQR 200 >gi|300866461|ref|ZP_07111152.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300335505|emb|CBN56312.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 200 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 17/189 (8%) Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQF 160 + R+ + + R F+D + PP L+ LGPEP F YL + Sbjct: 19 RVRLFFAEGRELRFVDQRTFGQMWWVPPTTEVSSAIAGLKKLGPEPFSEEFTVEYLAAKL 78 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 H ++ ++K ALL+Q ++AG+GNIY EAL+ LS +R S + + + +L Sbjct: 79 HHRSRSVKTALLDQALIAGLGNIYADEALF---LSGVRSQTSC---SDLTNEQIQRLHSA 132 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I +VL +A++AGG++ ++++++G G + VY + G+PC CG I R+ AGRS Sbjct: 133 IIQVLENALNAGGTTFSNFLNVNGVNGNYGGIAWVYNRAGQPC-RVCGTPIERLKLAGRS 191 Query: 281 TFYCTYCQK 289 + +C CQ+ Sbjct: 192 SHFCPQCQR 200 >gi|12045118|ref|NP_072929.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|2494593|sp|P55825|FPG_MYCGE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3844857|gb|AAC71484.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|166078880|gb|ABY79498.1| formamidopyrimidine-DNA glycosylase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 284 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N + + ++ RK L+ P + + + D+ R+ KY Sbjct: 1 MPELPEVTTVINELKETVLNKPLDQVQVNLRKVLKNIDPQLLNKQLKNQFFTDIKRKGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E N +H V + + ++ Y+D Sbjct: 61 IIFLLSNGLYLVSHLRMEGKYFFEERGSKF---NQKHVLVEFHFDDGS-----QLNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L E Q L L +P + F+ + + +K +L+Q +++G Sbjct: 113 RQFGTFHLYEKL--EQAAQLNKLAFDPLEAGFDYRKIFQKAQNSKRKVKTFILDQTVISG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P L T K+I L + K+L AI G+++ + Sbjct: 171 IGNIYADEILFASKINPETMVDQL-----TIKEIEI-LCKNATKILAKAIVMKGTTISSF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +QN V+ K +PC S C Q+I + GR +++C CQK Sbjct: 225 SFKKDHTGGYQNFLKVHTKKDQPC-SVCNQLIVKKKINGRGSYFCLNCQK 273 >gi|87125640|ref|ZP_01081485.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] gi|86166940|gb|EAQ68202.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] Length = 182 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 89/175 (50%), Gaps = 17/175 (9%) Query: 124 FMDLVETSLKYQYPP----------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 F+DL + PP L+ LGPEP FNA YL Q ++K ALL+ Sbjct: 13 FVDLRSFGQMWWVPPGEAAESVITGLQALGPEPFSAEFNAKYLQTQLKGSTRSIKAALLD 72 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG GNIY E+L A ++P + SL D L +L + +VL +I AGG Sbjct: 73 QSLVAGTGNIYADESLHAAGIAPQIRAGSL------NLDQLGRLRDALVRVLELSIGAGG 126 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ ++G G + SVY +TG+PC CG I R GRST +C CQ Sbjct: 127 TTFSDFRDLEGVNGNYGGQASVYRRTGQPC-PRCGTAIERQKLVGRSTHWCPVCQ 180 >gi|227495871|ref|ZP_03926182.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] gi|226834548|gb|EEH66931.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] Length = 350 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 85/351 (24%), Positives = 136/351 (38%), Gaps = 69/351 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + VT + L + LR F G+++ RR Sbjct: 1 MPELPEVEAVRRGLERHLVGRVVTGVEVLEPRALRRQEGGVEAFIRGLAGRRLEAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN------------------------ 93 K+L + L+ ++ HLGMSG ++ T+ A + Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTAPATSARGQEPGPVGDAPAADAVVADPSVPRV 120 Query: 94 -----------------PQHNHVTISLTNNTNTKKYRVIYN----DPRRFGFMDLVETSL 132 P+H V + LT+ + D R G + L E Sbjct: 121 DLTATRAPSLVRDLSVRPRHLRVRLHLTSREADPHPQAGAALDLVDQRMLGGLRLSEMVA 180 Query: 133 KYQYPPLRTLGPEP-------------ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 P+P D + + + + +K L++Q++V+G Sbjct: 181 TSDGASGGEGSPQPFLPQDAAHIARDLLDPAVDHDGVLARMRSSRRGVKALLMDQELVSG 240 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY E LW A++ RSL G +L++ +V+ A+ GG+S Sbjct: 241 VGNIYADEGLWAARVHAASPGRSLGPRVG------RRLLEATAEVMRRALKVGGTSFDAL 294 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G+ G+F YG+ G+ C CG ++R V RS +C CQ+ Sbjct: 295 YVDAEGAAGFFARELEAYGRAGQEC-RRCGATMQRQVIGARSHTFCPRCQR 344 >gi|166157053|emb|CAO79510.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 293 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I ++L + + +I + R + + KKI DV R AK + Sbjct: 1 MPELPEVHTISQDLKNNIVGYKIENIQIERNYKIPEIEKIRLGKIKDKKISDVERIAKNI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L N ++ HL M+G I+ P K + I + N + + + D R Sbjct: 61 VIKLSENEFLVFHLAMTGRIILT------PSKEKKDKWTKIVFKISKNGDEKYLKFCDMR 114 Query: 121 RFGFMDLVE----TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +FG + +++ + L+ +Y G + + + KN+ +KNA ++QKI Sbjct: 115 QFGKIKVLDEKSLSELRNKY------GLDILEGNITPDKFLEIIKSKNTTIKNAFMDQKI 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY +AL+ A ++P KTR+ N +++L L Q +L + I G++L Sbjct: 169 ISGVGNIYATDALFLAGINP--KTRTKDINLQKSENLLSSLKQ----ILQEGIKNRGATL 222 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D YV I G G Q F +YGK P CG + GR T+ C CQ Sbjct: 223 PDEMYVDIFGKPGNQQKHFKIYGKKICP---RCGARVSFEKINGRGTYSCPVCQ 273 >gi|297518691|ref|ZP_06937077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 137 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 7/144 (4%) Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P + FN YL + KK + +K L++ K+V G+GNIY E+L+ A + P R SL Sbjct: 1 PLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSL-- 58 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 + ++L ++I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC Sbjct: 59 -SLAECELLARVIKA---VLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-R 113 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQK 289 CG I A R+TFYC CQK Sbjct: 114 VCGTPIVATKHAQRATFYCRQCQK 137 >gi|320533366|ref|ZP_08034058.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134436|gb|EFW26692.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] Length = 346 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 88/341 (25%), Positives = 141/341 (41%), Gaps = 65/341 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + L + LR F G+ + RR Sbjct: 1 MPELPEVEVVRTGLTKHVAGRTVTRVEVLDPRPLRRQDGGAQAFIDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNPQHNHVTISLTN----------- 105 K+L + L+ ++ HLGMSG ++ T S P +P+ N T L + Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTSVTTPGADPESNRATAFLADPDTLPGGRPVD 120 Query: 106 -------------NTNTKKYRVIYN-------------DPRRFGFMDLVETSLKYQYPP- 138 +T+ + RV + D R G + +V+ + P Sbjct: 121 LSATEQPRYVRDISTSARHLRVRLHLSGDAGGAVLDLVDQRMLGGLHVVDLTPTDDGAPG 180 Query: 139 ----LRTLGP-----------EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 R L P +PA + + + +K LL+Q +V+GIGNI Sbjct: 181 GMGDPRPLLPTDATHIARDLLDPALDLTGPTGVVVRVRASRRAIKTQLLDQGLVSGIGNI 240 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHI 242 Y E LW A + +R L P+ ++ ++++ +V+ A++ GG+S YV + Sbjct: 241 YADEGLWEAGVHGLRPGTGLC-----PR-VVARILESTAEVMRRALEVGGTSFDALYVDV 294 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +G+ G+F YG+ G C CG + R GRS Y Sbjct: 295 EGAAGFFARELGAYGRQGLGC-RRCGATMAREALGGRSHTY 334 >gi|199594612|gb|ACH90770.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL+E S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVTELLPGQRIEDIRRRAKYLLLETAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594638|gb|ACH90783.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRQLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDEAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594628|gb|ACH90778.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594630|gb|ACH90779.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594646|gb|ACH90787.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGETHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594594|gb|ACH90761.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRVLRGDT--PLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594608|gb|ACH90768.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318248|gb|ADK67039.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318260|gb|ADK67045.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGSYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594536|gb|ACH90732.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594540|gb|ACH90734.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594544|gb|ACH90736.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594546|gb|ACH90737.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594548|gb|ACH90738.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594550|gb|ACH90739.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594556|gb|ACH90742.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594558|gb|ACH90743.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594562|gb|ACH90745.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594564|gb|ACH90746.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594568|gb|ACH90748.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594570|gb|ACH90749.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594572|gb|ACH90750.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594574|gb|ACH90751.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594576|gb|ACH90752.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594580|gb|ACH90754.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594582|gb|ACH90755.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594648|gb|ACH90788.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594654|gb|ACH90791.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594656|gb|ACH90792.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594658|gb|ACH90793.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594662|gb|ACH90795.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594664|gb|ACH90796.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318226|gb|ADK67028.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas sp. DSM 2408] gi|301318228|gb|ADK67029.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas rhizophila] gi|301318230|gb|ADK67030.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas koreensis] gi|301318236|gb|ADK67033.1| DNA-formamidopyrimidine glycosylase [Pseudoxanthomonas dokdonensis] gi|301318240|gb|ADK67035.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318242|gb|ADK67036.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318244|gb|ADK67037.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318246|gb|ADK67038.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318250|gb|ADK67040.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318254|gb|ADK67042.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318256|gb|ADK67043.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318258|gb|ADK67044.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318262|gb|ADK67046.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318264|gb|ADK67047.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318266|gb|ADK67048.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas chelatiphaga] Length = 155 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594554|gb|ACH90741.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594626|gb|ACH90777.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFSRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594596|gb|ACH90762.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594590|gb|ACH90759.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 +++ V + L R +LR+ P + G++I DV RRAKYLL++ S ++HLGMS Sbjct: 2 LQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIEDVRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGQVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594632|gb|ACH90780.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|328479631|gb|EGF48819.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus rhamnosus MTCC 5462] Length = 142 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 8/149 (5%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + + RR KYLLI L ++I+ HL M G + + + P+ +H+HVT + + Sbjct: 2 GAAVTTIDRRGKYLLIRLNNGMTIVSHLRMEGRYYVV-SDAKTPLD--KHDHVTFTFQDG 58 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + Y D R+FG M L+ T + P L LGPEP +F+ + + + Sbjct: 59 SQLR-----YRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKA 113 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +K+ LL+Q +VAGIGNIY E LW +KL+ Sbjct: 114 IKSVLLDQTVVAGIGNIYADEVLWLSKLN 142 >gi|194246472|ref|YP_002004111.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] gi|193806829|emb|CAP18258.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] Length = 270 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 29/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE++ R+L + + + +I + + + + D +KI++++R+ K Sbjct: 1 MPELPEVEVVVRSLKKNLIDKKIINIKVLYEPIVGKLDI----FKKILNQKILNLTRKGK 56 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN--PQHNHVTISLTNNTNTKKYRVIY 116 YL+ L ++ HL M G KP +H H + L NN + + + Sbjct: 57 YLIFFFSNELVLVGHLRMEGKLYF------KPSDEIIVKHEHFVLFLENNISLR-----F 105 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG + E Q L L EP + S Y K ++KN+LL+QKI Sbjct: 106 KDTRKFGRFIVYEQKNYLQSSKLEHLALEPFEISTFDFY--QILKNKKKSIKNSLLDQKI 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIY E L+ +K+ P ++ I T K + Y +++ AI GG+S+ Sbjct: 164 IAGLGNIYANEVLFLSKIHPANRSCD-ITFEQTEKILNYS-----KQIFKQAILLGGTSI 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G FQ V+GK + CL C + I +I GR T++C+ CQ Sbjct: 218 NTFDSL-GIQGSFQKKLLVHGKEKQSCLV-CCKPIMKIKLGGRGTYFCSNCQ 267 >gi|199594584|gb|ACH90756.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594602|gb|ACH90765.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594614|gb|ACH90771.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594642|gb|ACH90785.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594652|gb|ACH90790.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPTGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594604|gb|ACH90766.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I DV RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDVRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDEAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594588|gb|ACH90758.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594592|gb|ACH90760.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594600|gb|ACH90764.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594620|gb|ACH90774.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594624|gb|ACH90776.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594644|gb|ACH90786.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594650|gb|ACH90789.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594660|gb|ACH90794.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594666|gb|ACH90797.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318252|gb|ADK67041.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I V RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYLLLDTAAG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594566|gb|ACH90747.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV IS+ N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISMDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|282875890|ref|ZP_06284757.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] gi|281294915|gb|EFA87442.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] Length = 201 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 111/220 (50%), Gaps = 25/220 (11%) Query: 76 MSGSFIIEHTSCAKPIKNP---QHNHVTISLTNNTNTKKYRVIYNDPRRFG-FMDLVETS 131 M+G F + + I P +H V L N K +++Y+D RRFG ++V Sbjct: 1 MAGGFFV--VNNLDEISTPNYRKHWQVIFDLDN-----KQKLVYSDIRRFGEIRNIVNFD 53 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNALLNQKIVAGIGNIYVCEAL 189 YP L + PEP + YL KK N +K +L+ +++AG GNIY CEAL Sbjct: 54 ---SYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNKPIKQTILDHRVIAGAGNIYACEAL 110 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 +RA ++P + T SL + K + Y +++VL + I GG+S+ DY H DG G Sbjct: 111 FRAGITPDKITNSLTKQE--RKSLFYY----VREVLEEGIKYGGTSISDYRHADGKTGQM 164 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q +VY + + C CG I V AGR++ +C CQ+ Sbjct: 165 QLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCPNCQR 201 >gi|199594618|gb|ACH90773.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas acidaminiphila] Length = 155 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ + + L R +LR+ P A G++I + RRAKYLL++ + S ++HLGMS Sbjct: 2 LQGRRIHGVILRRPDLRWPIPPDIERALPGQRIAAIRRRAKYLLLDTDAG-SALLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL + + +NDPRRFG + ++ Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLEDGRLLR-----FNDPRRFGCLLWQPPGETHEL- 110 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D +F+ YL + +++ +K+ L++Q+IV G+GNI Sbjct: 111 -LRGLGPEPLDAAFDGDYLFARSRGRSAPVKSFLMDQRIVVGVGNI 155 >gi|199594636|gb|ACH90782.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594668|gb|ACH90798.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594670|gb|ACH90799.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLRT--HDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDETFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594616|gb|ACH90772.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas nitritireducens] Length = 155 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ + + L R +LR+ P G++I + RRAKYLL++ + S ++HLGMS Sbjct: 2 LQGRRIHGVILRRPDLRWPIPAEIERELPGQRIAAIRRRAKYLLLDTDAG-SALLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL + + +NDPRRFG + ++ Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLEDGRLLR-----FNDPRRFGCLLWQPAGETHEL- 110 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D++F+ YL + +++ +K L++Q+IV G+GNI Sbjct: 111 -LRALGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQRIVVGVGNI 155 >gi|152964129|ref|YP_001359913.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] gi|151358646|gb|ABS01649.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 43/305 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L + V + + N+ +D P +A G + V RR K Sbjct: 1 MPELPEVEALATFLRERLVGRVVARVEVGALNVLKTYDPP---PSALGGLLVAGVVRRGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L ++++G L + VHL +G A P++ N V + + + D Sbjct: 58 WLDVDVDG-LHLAVHLSRAGWVRWSDALPAAPLRPGGKNPVALRVRLAPEDDE------D 110 Query: 119 PRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 P R DL E + Q P + TLGP+P D++F+ + Sbjct: 111 PHRPPGFDLTEAGTQKRLAVHVVRDPAQVPGIATLGPDPLDDAFDEAAFASLLAGSRQQV 170 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L +Q ++AG+GN Y E L A+LSP L P + +L ++ L+D Sbjct: 171 KGLLRDQSVLAGVGNAYSDEVLHVARLSPYAIAGKL------PAPDVERLYDALRTTLLD 224 Query: 228 AIDAG----GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 A+ A L+D + V+G+ G PC CG +R + A RS Y Sbjct: 225 AVAAASGKPAKELKD---------AKRAGLRVHGRAGLPC-PVCGDTVREVSFADRSMQY 274 Query: 284 CTYCQ 288 C CQ Sbjct: 275 CATCQ 279 >gi|301318232|gb|ADK67031.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas humi] Length = 155 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ + + L R +LR+ P G++I + RRAKYLL++ + S ++HLGMS Sbjct: 2 LQGRRIHGVILRRPDLRWPIPAEIEQQLPGQRIEAIRRRAKYLLLDTDVG-SALLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL + + +NDPRRFG + ++ Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLEDGRLLR-----FNDPRRFGCLLWQPAGETHEL- 110 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D+ F+ YL H+ +++ +K L++Q+IV G+GNI Sbjct: 111 -LRELGPEPLDDVFDGDYLFHRSRGRSAAVKTFLMDQRIVVGVGNI 155 >gi|199594532|gb|ACH90730.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594534|gb|ACH90731.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594538|gb|ACH90733.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594542|gb|ACH90735.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594622|gb|ACH90775.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDEGFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594586|gb|ACH90757.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594606|gb|ACH90767.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594634|gb|ACH90781.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|301318238|gb|ADK67034.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGQIHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594560|gb|ACH90744.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L+ LGPEP D++F+ +L + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLQGLGPEPLDDAFDGDHLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594552|gb|ACH90740.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAVG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ +P Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGEVHP 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ LGPEP D+ F+ YL + +++ +K L++Q +V G+GNI Sbjct: 110 LLQGLGPEPLDDVFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594578|gb|ACH90753.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 14/167 (8%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 +++ V + L R +LR+ P + G++I + RRAKYLL++ S ++HLGMS Sbjct: 2 LQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIGGIRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 GS ++ + +P H+HV ISL N + +NDPRRFG L+ + Sbjct: 61 GSLRVLPGDTPLRP-----HDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGQVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|48243642|gb|AAT40785.1| putative formamidopyrimidine-DNA glycosylase Fpg [Haemophilus influenzae] Length = 156 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 14/162 (8%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTI 101 A +K+I +SRRAKYL+I+LE +I HLGMSGS ++E +H+H+ I Sbjct: 7 AQITQQKVIALSRRAKYLIIQLETGY-MIGHLGMSGSLRVVEKGDLID-----KHDHLDI 60 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + N + YNDPRRFG + T ++P LGPEP F++ YL + Sbjct: 61 VVNNGKVVR-----YNDPRRFG--AWLWTEKLNEFPLFLKLGPEPLSEEFDSDYLWQKSR 113 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 KK + LK L++ +V G+GNIY E L+ L P + +R Sbjct: 114 KKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKNSREF 155 >gi|269929067|ref|YP_003321388.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269788424|gb|ACZ40566.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 286 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 27/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + L R L P A G ++ V R KYL Sbjct: 1 MPELPEVEAARRGIAEQLLGRVLVGYELTRPALVVPAPGLTLDALVGSRLECVERHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------PIKNPQHNHVTISLTNNTNTKKYR 113 + E + +++HL ++G + + P + H + L + + + Sbjct: 61 FLSFEPAV-LVIHLKLAGQLVARGSGIPGFAAGHPVPAYDAPLPHKSTHLRFDFDGDAH- 118 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRT---LGPEPADNSFNAIYLTHQFHKKN-SNLKN 169 + D R F + L+ P R LGP+ D +F L ++ LK Sbjct: 119 LYLTDIRHFARVWLLPHD---DLPAFREGLHLGPDVLDPAFTVETLRQGLARRTVGRLKP 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +VAG+GNIYV E+LW+AKL P R SL + +L + I + A+ Sbjct: 176 TLLDQSLVAGLGNIYVDESLWQAKLHPERTAASLTDAE------IERLYEGIHTTMELAL 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+ + + +G F V+G+ G PC CG I +I R T+ C CQ Sbjct: 230 PTGGARILNS-KAQTEVGEFP---FVHGREGLPC-PRCGTAIIKIRVNNRGTYLCPQCQ 283 >gi|283781572|ref|YP_003372327.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] gi|283440025|gb|ADB18467.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] Length = 284 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 33/299 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ T+ D+ C R + G KI + R Sbjct: 1 MPELPEVETMRRGILKAT-GATIVDVQLEPCARRPIAIKPSLAVVQKSLIGTKISAIERL 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +++ + +I+ M+G ++ + +H + I L + + Y Sbjct: 60 GKRVVVRAGDDFHLILEPRMTGLVLVSDPP------SREHLRLRIDLAGSVLPSIW---Y 110 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEP---ADNSFNAIYLTHQFHKKNSNLKNALL 172 D R G + L T+ L+ Q + LGP+ + + F+A + + + +K ALL Sbjct: 111 WDRRGLGSIQLYRTAELEAQLLSGK-LGPDALAISKDDFSA-----RLKRTSRAIKVALL 164 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GN+Y E L A + P + L + D+L+ + E VL AI Sbjct: 165 DQQIVAGVGNLYASEILHLAAIDPKCRANKLTRQQ---LDLLHDKMLE---VLHTAILHE 218 Query: 233 GSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L D Y + G +QN VY + EPC C I+RIVQA RSTF+C CQ+ Sbjct: 219 GSTLSDGTYRNALAQAGNYQNMHRVYDREHEPC-PTCLSPIQRIVQAQRSTFFCAACQR 276 >gi|329938480|ref|ZP_08287905.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329302453|gb|EGG46344.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 286 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 48/303 (15%) Query: 1 MPELPEVEIIRRNLM--MVMKNMT-VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L +V + +T V + +H +D P +A +G+ + V R Sbjct: 1 MPELPEVEALRDFLTGHLVGREVTRVLPLAVHVLKT-YDPP---PSALQGRTVTAVHRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L ++ EG L ++ HL +G H P P+ ++L +T Sbjct: 57 KFLDLDAEG-LHLVTHLARAGWL---HWRDRLPETPPRPGKGPLALRVALDTGA------ 106 Query: 118 DPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 GF DL E + + P + LGP+P F+ L + Sbjct: 107 -----GF-DLTEAGTQKRLAVYVVRDAAEVPGVARLGPDPLAADFDEARLAGLLAGERRQ 160 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK AL +Q ++AG+GN Y E L A++SP + T SL TP++I ++L + ++ L Sbjct: 161 LKGALRDQGLLAGVGNAYSDEILHAARMSPFKPTASL-----TPEEI-HRLYEALRGTLT 214 Query: 227 DAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A++ R G + ++ V+G+TGEPC CG +R + + S YC Sbjct: 215 EAVE------RSRGVAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCP 267 Query: 286 YCQ 288 CQ Sbjct: 268 TCQ 270 >gi|302549792|ref|ZP_07302134.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|51317971|gb|AAU00096.1| putative ORF261 [Streptomyces viridochromogenes] gi|302467410|gb|EFL30503.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 261 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 124/292 (42%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ + + D Sbjct: 61 LLAR-TGGPTLVLHFGMTGRLVCCHPGDAVEA----HDRVLFTLSGGRQLR-----FRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEP--ADNS-FNAIYLTHQFHKKNSNLKNALLNQKI 176 R+ + L LR GP+ D + F A+ + +LK AL +Q + Sbjct: 111 RKLQGLWLAHDDFDIDRL-LRRQGPDALTVDRAEFEAVLCA-----RRGSLKTALTDQSV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+ E LWRA+L P R+TR L + + L +L ++ L A+ AG Sbjct: 165 LAGLGNLLADEILWRARLRPDRRTRELTEAD------LRRLYGRMRGTLRAAVPAGCVPP 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 RD + + + +P CG +RR AGR T +C CQ Sbjct: 219 RD------------SWLTGHRDDPDPTCPRCGTGLRRSRMAGRGTVWCPRCQ 258 >gi|199594598|gb|ACH90763.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ ++ + L R +LR+ P S G+ I V RRAKYLL++ S ++HLGMS Sbjct: 2 LEGRSIHGVILRRPDLRWPIPPEISEQLPGQAIEAVRRRAKYLLLDTAIG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG L+ + Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLDNGRLLR-----FNDPRRFG--SLLWQPAGETHA 109 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + +++++K L++Q IV G+GNI Sbjct: 110 LLAGLGPEPLDDAFDGDYLFARSRGRSASVKTFLMDQGIVVGVGNI 155 >gi|239978113|ref|ZP_04700637.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291450010|ref|ZP_06589400.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291352959|gb|EFE79861.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] Length = 286 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 130/302 (43%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT---DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TV + H +D P A G++I V R Sbjct: 1 MPELPEVEALREFLAVHAVGRTVERVLPVAFHVLKT-YDPPATDLA---GQRITAVDRYG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + G L ++ HL +G + T A P P+ ++L RV+ + Sbjct: 57 KFLDLTV-GPLHLVTHLARAGWLKWQDTVPAAP---PRPGKGPLAL---------RVVLD 103 Query: 118 DPRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 D F DL E + + P + LGP+P + F+ L ++ Sbjct: 104 DGSGF---DLTEAGTQKRLAVYVVRDPADVPGIARLGPDPLADGFDRDRLAALLAPESRL 160 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK AL +Q ++AGIGN Y E L A+LSP + L T L + ++ L Sbjct: 161 LKGALRDQSLIAGIGNAYSDEILHAARLSPFKNAGRLTDEETT------ALYEALRTTLT 214 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DA++ G ++ + + V+GK GEPC CG IR + A S YC + Sbjct: 215 DAVERGRGVAAGHLKKEK-----KTNLRVHGKDGEPC-PVCGDTIRSVNFADSSLQYCPH 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|199594610|gb|ACH90769.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 12/166 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P A G+ I V RRAKYLL++ S ++HLGMS Sbjct: 2 LEGRRVHGVILRRPDLRWPIPDEIGALLPGQAIEGVRRRAKYLLLDTAIG-SALLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + P++ H+HV ISL N + +NDPRRFG + ++ Sbjct: 61 GSLRV--LPGDTPVR--AHDHVDISLDNGRLLR-----FNDPRRFGSLLWQPAGETHEL- 110 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + + + +K L++Q IV G+GNI Sbjct: 111 -LAGLGPEPLDDAFDGDYLFQRSRGRKAPVKTFLMDQGIVVGVGNI 155 >gi|296122878|ref|YP_003630656.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] gi|296015218|gb|ADG68457.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] Length = 301 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATR--GKKIIDVSRR 56 MPELPEVE + R + ++ + + + R P + R G+ I V R Sbjct: 1 MPELPEVETMVRGVRSALERHRLVALRILDTAYRSLTILPDERTVCERVAGQVIQRVWRL 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-----NPQHNHVTISLTNNTNTKK 111 K ++++ ++ + M+G ++E A+ ++ P +H + + +T Sbjct: 61 GKRVVLDFSDGSTLTIEPRMTGLMLLEDPPSAEHLRLEFRLAPAGSHGSPTKGKGKSTS- 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 V + D R G + + +GP+ S A K + +K A+ Sbjct: 120 --VWFWDRRGLGTVTWRPPGELEKLLSSHQIGPDAL--SLAAEGWKAALGKTSRPVKVAM 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK+VAG+GN+Y E L RA +SP+ + L P++ +L +++L AI Sbjct: 176 LDQKLVAGVGNLYASEILHRAGISPLSASSQL-----HPEE-WERLANAARQILELAIQY 229 Query: 232 GGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L D Y + G +QN VY K GE C + +I RIVQA RSTFYC +CQ Sbjct: 230 EGSTLSDGTYRNALNKSGGYQNEHLVYAKAGEVCSTCRSGVILRIVQAQRSTFYCEHCQ 288 >gi|301318234|gb|ADK67032.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas terrae] Length = 155 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 12/158 (7%) Query: 26 ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHT 85 + L R +LR+ P G++I + RRAKYLL++ E S ++HLGMSGS + Sbjct: 10 VILRRPDLRWPIPAEIEQLLPGQRIEAIRRRAKYLLLDTELG-SAVLHLGMSGSLRV--L 66 Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE 145 P++ H+HV ISL + + +NDPRRFG + ++ LR LGPE Sbjct: 67 PGDTPVR--AHDHVDISLEDGRLLR-----FNDPRRFGSLLWQPAGETHEL--LRDLGPE 117 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P D F+ YL + + + +K L++Q IV G+GNI Sbjct: 118 PLDADFDGDYLFQRSRGRKAPIKTFLMDQGIVVGVGNI 155 >gi|318060353|ref|ZP_07979076.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actG] Length = 287 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 83/301 (27%), Positives = 127/301 (42%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + T + N+ +D P +A G ++ DV R K Sbjct: 1 MPELPEVEALRDFLDDHLVGRIPTRVLPVAVNVLKTYDPP---PSALVGHEVTDVRRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTNT 109 +L + +G ++ HL +G + + KP + P + + LT Sbjct: 58 FLDVVTDGGPRLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSGFDLTEAGTQ 117 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + +DPR P + LGP+P F+ + LK Sbjct: 118 KRLAVYVVDDPR--------------TVPGIARLGPDPLAPGFDRAAFAELLRGERRQLK 163 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q +VAG+GN Y E L AKLSP + L + + +L + ++ L +A Sbjct: 164 GALRDQSLVAGVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEA 217 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + R GS+ ++ V+G+TGEPC CG IR + A S YC C Sbjct: 218 V------ARSRGIAAGSLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|290955721|ref|YP_003486903.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260645247|emb|CBG68333.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 289 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 45/303 (14%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L+ ++ + V + + L+ +D P +A G++I DV R K Sbjct: 1 MPELPEVEALRDFLVGSLVGHEAVRVLPVAISVLKTYDPP---VSAFEGREITDVRRHGK 57 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN--------- 108 +L IE +G L ++ HL +G + P + N + + + T Sbjct: 58 FLDIEADGGELHLVTHLARAGWLQWKDRLPDGPPRPGGRNPLALRVALETGEGFDLTEAG 117 Query: 109 TKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T+K +Y DP Q P + LGP+P + F+ + Sbjct: 118 TQKRLAVYVVRDP--------------AQVPGIARLGPDPLADEFDVTRFAGLLAGERRQ 163 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K AL +Q ++AGIGN Y E L A++SP R T SL P++I + L + ++ L Sbjct: 164 IKGALRDQSLIAGIGNAYSDEILHAARMSPFRLTSSL-----KPEEIRH-LHEALRTTLT 217 Query: 227 DAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A++ R G + ++ V+G+ GEPC CG +R + + S YC Sbjct: 218 EAVE------RSRGLAAGRLKAEKKSGLRVHGRAGEPC-PVCGDTVREVSFSDSSLQYCP 270 Query: 286 YCQ 288 CQ Sbjct: 271 TCQ 273 >gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPE+E R L + VT + + R+ + P F G I + RRAK+ Sbjct: 1 MPELPEMENYRLLLNERIAGQKVTGVEVTREKT-INVPVQSFLKEVNGTIIEHIDRRAKH 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L +++HL + G + + P + Q VT+++ ++ Sbjct: 60 LIFKLSNGKRLVLHLMLGGVLFLGNGE-NDPDRTRQ---VTLTIGKIE-------LFFIG 108 Query: 120 RRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G++ LV + ++ Q+ + LGPEP + +A K+ LK L+NQK ++ Sbjct: 109 LRLGYLHLVTQEEMEEQF---KDLGPEPLQITIDA--FNELIKKRKGMLKTTLVNQKFIS 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN+Y E + A+L P RK L + +++L L Q IQ VL I GG + Sbjct: 164 GIGNLYSDEICYEARLLPERKMNEL-----STQEVL-DLFQSIQHVLRRGISQGG-YMDP 216 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D G + +AF VY + GE C S C I R + R FYC CQK Sbjct: 217 LFNGDAQTGNY-HAF-VYDREGEAC-SRCQTHIVREEISSRKCFYCPNCQK 264 >gi|282163419|ref|YP_003355804.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] gi|282155733|dbj|BAI60821.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] Length = 269 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + +K T+ +I + ++ + FS GKKI V+ + K++ Sbjct: 1 MPELPEIYNLAGQMDEALKGKTIREIQIRQEKCLNMPANEFSTLVVGKKIRQVTPKGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++LE + ++ LGM G+ + P K ++LT + N++ + Sbjct: 61 FMKLEPDGYFLLSLGMGGNLLYHRPGDNIPEK------YQVALTFDDNSRLSIGFWWFGY 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 DL E + ++ LG P D +F K ++K ALL+Q +AGI Sbjct: 115 AHAVKDLKEHKMTHK------LGVSPVDPAFTLEKFYGMLEGKKGSVKTALLDQSFIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y + L+ AKL P RK +L + L + I+ L +AI GG + + Sbjct: 169 GNVYAQDILFNAKLHPDRKIPTLTEGE------RRALFEAIRHDLDEAIALGGIAPEKDL 222 Query: 241 HIDGSIGYFQ-NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G + F + G+PC CG I +I +++ C CQ+ Sbjct: 223 Y--GKPGRLTIDDFKAGYREGKPC-PVCGTTIEKIKTGSTASYICPKCQR 269 >gi|256789490|ref|ZP_05527921.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289773384|ref|ZP_06532762.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289703583|gb|EFD71012.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 287 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 124/301 (41%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + + + ++ +D P A G ++ V R K Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPP---LTALEGHRVAAVHRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTIS------LTNNTNT 109 +L +E G ++ HL +G + + KP K P V + LT Sbjct: 58 FLDVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALETGAGFDLTEAGTQ 117 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + DPR Q P + LGP+P F+ + LK Sbjct: 118 KRLAVYVVADPR--------------QVPGVARLGPDPLAADFDEARFAALLDGERRQLK 163 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AG+GN Y E L AK+SP + SL D +L ++ L +A Sbjct: 164 GALRDQSLIAGVGNAYSDEILHAAKMSPFKLAASLTD------DETARLYAALRDTLTEA 217 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++ R G + ++ V+G+TGEPC CG IR + + S YC C Sbjct: 218 VE------RSRGIAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|291298922|ref|YP_003510200.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290568142|gb|ADD41107.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 286 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 50/304 (16%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE + RR + +K + V I + FD P A G++I V R Sbjct: 1 MPELPEVEALADFLRRRAVSHEVKRVDVASITALKT---FDPP---PTALHGRRITAVDR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTN------ 108 K+L ++ +G +I HL +G A P++ +H + ++L + + Sbjct: 55 HGKFLDLDADGT-HLIFHLARAGWLRWNDKLAATPLRPGKHPLALRLALDDGSGFDLSEA 113 Query: 109 -TKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 TKK +Y +DP Q P + LGP+P SF + + Sbjct: 114 GTKKRLAVYVVSDP--------------AQVPGIAGLGPDPLAESFTEAAFAAVLSGRRT 159 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKV 224 +K L +QK++AGIGN Y E L A++SP + SL + + +LY+ ++ ++ Sbjct: 160 QIKGLLRDQKLIAGIGNAYSDEILHAARMSPFKLADSLTDTDVS---VLYEAMVDTLRTA 216 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + + + L+ + H ++ V+G+ G+PC CG I + A + YC Sbjct: 217 VAASSGSAAKDLKAHKH---------DSLRVHGRAGQPC-PVCGDTIAEVSFADSALQYC 266 Query: 285 TYCQ 288 CQ Sbjct: 267 PTCQ 270 >gi|21219464|ref|NP_625243.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|6580659|emb|CAB63194.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 287 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 81/301 (26%), Positives = 123/301 (40%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + + + ++ +D P A G ++ V R K Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPP---LTALEGHRVAAVHRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTIS------LTNNTNT 109 +L +E G ++ HL +G + + KP K P V + LT Sbjct: 58 FLDVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALETGAGFDLTEAGTQ 117 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + DPR Q P + LGP+P F+ + LK Sbjct: 118 KRLAVYVVADPR--------------QVPGVARLGPDPLAADFDEARFAALLDGERRQLK 163 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AG+GN Y E L AK+SP + SL +L ++ L +A Sbjct: 164 GALRDQSLIAGVGNAYSDEVLHAAKMSPFKLAASLTDEE------TARLYAALRDTLTEA 217 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++ R G + ++ V+G+TGEPC CG IR + + S YC C Sbjct: 218 VE------RSRGIAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|119962635|ref|YP_948112.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949494|gb|ABM08405.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 293 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 55/309 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + +T++ ++ L+ P + A G+ I+ R K+ Sbjct: 3 MPELPEVHGLCMYLDTQLHGAVLTEVRINSFSALKTADPPY--TALEGRTILGAKRIGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSF-IIEHTSCAKP------------IKNPQHN-HVTISLTN 105 + I+ +G L + HL +G EH S A + P + H+ + LT Sbjct: 61 VCIDADG-LFFVFHLAKAGWVRYTEHPSSAGLRMGKSNISARLLLHRPADDAHIGVDLTE 119 Query: 106 NTNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 TKK IY DP+ P + TLGPEP F+ L Sbjct: 120 -AGTKKSLAIYVVKDPQ--------------DVPGIATLGPEPLSPDFDLDALAGILGSS 164 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K L +Q ++AGIGN Y E L A++SP +SL Q + +L +Q+ Sbjct: 165 SQQIKGLLRSQSVIAGIGNAYSDEILHAARISPFATAKSLDQAT------VARLYAAMQE 218 Query: 224 VLIDAIDAGG----SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 VL+ A++A S L+D ++ F V+ +TG+PC CG +R + A Sbjct: 219 VLVGAVNAAAGKPSSELKDTK---------RSNFRVHARTGQPC-PVCGDTVREVSFADT 268 Query: 280 STFYCTYCQ 288 S YC CQ Sbjct: 269 SLQYCPTCQ 277 >gi|226326881|ref|ZP_03802399.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] gi|225204718|gb|EEG87072.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] Length = 116 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL L+ I++VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKANSLTSEESEV------LVTAIKRVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ +PCL CGQ I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKPCLI-CGQPIESIKQGQRSTFFCRHCQ 110 >gi|333023009|ref|ZP_08451073.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332742861|gb|EGJ73302.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 287 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 83/301 (27%), Positives = 127/301 (42%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + T T + N+ +D P +A G ++ DV R K Sbjct: 1 MPELPEVEALRDFLDDHLVGRTPTRVLPVAVNVLKTYDPP---PSALVGHEVTDVRRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTNT 109 +L + +G ++ HL +G + + KP + P + + LT Sbjct: 58 FLDVVTDGGPHLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSGFDLTEAGTQ 117 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + +DPR P + LGP+P F+ + LK Sbjct: 118 KRLAVYVVDDPR--------------TVPGIARLGPDPLAPGFDRAAFAELLRGERRQLK 163 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q +VAG+GN Y E L AKLSP + L + + +L + ++ L +A Sbjct: 164 GALRDQSLVAGVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEA 217 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + R GS+ ++ V+G+TGE C CG IR + A S YC C Sbjct: 218 V------ARSRGIAAGSLKAEKKSGLRVHGRTGESC-PVCGDTIREVSFADSSLQYCPTC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|117165133|emb|CAJ88687.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces ambofaciens ATCC 23877] Length = 287 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + + ++ + SA G ++ V R K+L Sbjct: 1 MPELPEVEALREFLTEHLVDREIVRVLPVAISVLKTYDPPLSA-LEGHQVAAVHRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTIS------LTNNTNTKK 111 +E G ++ HL +G + + +P K P V + LT K+ Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPDGPPRPGKGPLALRVALDTGAGFDLTEAGTQKR 119 Query: 112 YRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V + DPR + P + LGP+P + F+ + LK A Sbjct: 120 LAVYVVADPR--------------EVPGVARLGPDPLADDFDEARFAALLDGERRQLKGA 165 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L +Q ++AG+GN Y E L AK+SP + SL +L + ++ L +A++ Sbjct: 166 LRDQSLIAGVGNAYSDEILHAAKMSPFKLAASLTDEETA------RLYEALRATLTEAVE 219 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 220 RSRGVAAGRLKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 271 >gi|312601525|gb|ADQ90780.1| DNA glycosylase [Mycoplasma hyopneumoniae 168] Length = 159 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 9/161 (5%) Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + L ++ PL+ L PEP + Y + K + ++K LL+QKI++G+GNIY E Sbjct: 4 DVELLFKTKPLKDLAPEPFFIKVDDFY--QKIRKSSRSIKAILLDQKIISGLGNIYADEV 61 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 + K+ P + + + + +I +K+L ++I GGSS+ Y ++ G Sbjct: 62 CFATKIFPGKAAKLISRKEAEL------IIDFSKKILQESIKLGGSSISSYTSLNAKEGK 115 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 116 FQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 155 >gi|755066|gb|AAA91094.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti] Length = 70 Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%) Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGR 279 I+ V+ DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C + C + RIVQAGR Sbjct: 1 IRAVIADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGR 60 Query: 280 STFYCTYCQK 289 STFYC +CQK Sbjct: 61 STFYCPHCQK 70 >gi|258652623|ref|YP_003201779.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] gi|258555848|gb|ACV78790.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] Length = 288 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/309 (26%), Positives = 129/309 (41%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR L + + D+ H + R P +A G+ RR K Sbjct: 1 MPELPEVESARRVLADGALHRRIADVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGKS 60 Query: 60 LLIELEGNLS-------------IIVHLGMSGSFIIEHTSCAKP----IKNPQHNHVTIS 102 + + + G+ + +HLGMSG ++ S + + + Sbjct: 61 MWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDREQ 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + +++ V + D R +D S P ++ LGP+ S A + Sbjct: 121 FVDRGAYQRFAVTFADGGRMRLLDPRRLSRVRLDPDIQALGPDALGLSPTAFRTAMTAGR 180 Query: 163 KNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + S +K LL+Q ++AG+GN+ EALWRAK++P R +L L +L + Sbjct: 181 RVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQ------LNRLGRA 234 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +Q L DAI GG VH I K+G C G M+ +V GR+ Sbjct: 235 VQSALTDAIARGG------VHTGDVIAAR--------KSGARCPRCGGAMVSGVV-GGRT 279 Query: 281 TFYCTYCQK 289 T++C+ Q+ Sbjct: 280 TWWCSKEQR 288 >gi|301300337|ref|ZP_07206542.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852073|gb|EFK79752.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 148 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 11/152 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ N + DI L+ K + + F K I + RR KY Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTI-INEETEFIEKLTNKTIKKIDRRGKY 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L++I HL M G + +E K ++ +H HV T+ T+ + YND Sbjct: 60 LLFRFSSDLTMISHLRMEGKYFVE--PSTKEVE--KHTHVVFDFTDGTSLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 R+FG M LV+T ++ Q L LGPEP + +F Sbjct: 111 RKFGRMQLVKTGVEMQTAGLAKLGPEPKEETF 142 >gi|253576739|ref|ZP_04854066.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843949|gb|EES71970.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] Length = 272 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPE+E R L + ++ +T + + R+ + P F+ G+++I + RR K Sbjct: 1 MPELPEMENYRIQLSQHILDLPITGVNVGREK-SVNLPAADFARELMGRQVIFIERRGKN 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ N ++ M G + + +P ++ Q V I+ V+Y Sbjct: 60 LLFHLD-NGRRLLLHLMLGGLLYLGSKEDRPERSTQ---VEITFGEKL------VLYFIG 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + L S K L LGPE D N T K+ +LK L+NQ ++ G Sbjct: 110 LRLGHLHL--HSAKEAEELLSHLGPELLDRRMNEERFTALLRKRRGSLKTTLVNQDVIPG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + A+L P+ K ++ + +L Q ++ VLI+A +AGG Sbjct: 168 IGNCYADEIAFAAELLPMAKLQNFSDED------FSRLYQAVRDVLIEATEAGGYMEMPL 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G VY + GE C CG I + GR FY CQ Sbjct: 222 TRDDQLTGGANEICRVYDREGETC-PRCGDTIVKAEMNGRKVFYSPGCQ 269 >gi|189425027|ref|YP_001952204.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] gi|189421286|gb|ACD95684.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] Length = 271 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT---VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + + L ++ V ++ + R ++ G DV R Sbjct: 1 MPELPEVESVLQCLTTSNPSLIGRLVREVRILRNSVIDGEASAVVQTVTGSTCCDVYRHG 60 Query: 58 KYLLIELEGN-----LSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 KYL +G+ + + +HL M+G F++ A+ +H + L + + Sbjct: 61 KYLFFGFQGHSASKRVWLALHLRMTGRLFLVPEQEIAE-----RHTRFALLLDHGLALR- 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++DPR FG + LV+ + LGP+ + H LK L Sbjct: 115 ----FDDPRAFGRVWLVDDPSEVT----SKLGPDAL--LIQQKTFLDRLHGARRQLKPLL 164 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q VAG+GNIY E L+RA+L P R + L + + + VL+ A+ A Sbjct: 165 LDQGFVAGVGNIYADETLFRAQLHPARLSADLTSSEAE------RFYHALHGVLVQAVAA 218 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ IDG +VYG+ G PC+ CG +I + R T +C CQ Sbjct: 219 KGAN------IDGVFEAGSFPVAVYGRGGRPCIV-CGTLIVKERLGQRGTHFCPVCQ 268 >gi|320102895|ref|YP_004178486.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] gi|319750177|gb|ADV61937.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] Length = 288 Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 87/304 (28%), Positives = 128/304 (42%), Gaps = 43/304 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI------CLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE + R L + + + L + D F + V Sbjct: 1 MPELPEVETMARGLRPTLTGAKLGQVEVIDPKLLEGSGMSAD---RFVERVSESVVSHVG 57 Query: 55 RRAKYLLIELEGNLSIIV-HLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 RR K+L+ L G ++V M+G F +IE P H + L T Sbjct: 58 RRGKWLVWTLAGQRGLVVIQPRMTGGFWLIEP-------DRPHHVRILFPLPELGKT--- 107 Query: 113 RVIYNDPRRFG----FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 V D RR G F D + S + R+ GP+ + + L + + LK Sbjct: 108 -VWLTDARRLGRVLWFADQTQASAAFA----RSHGPDALEIERDD--LAARLARTARGLK 160 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L++QK++AGIGNIY E + A++ P I N + +L I +L+ A Sbjct: 161 PTLMDQKVLAGIGNIYADEICFAARIHP------EIPANTLSARQVDRLHAAISAILLRA 214 Query: 229 IDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRSTFYC 284 I A GSS Y + G G F ++YG+ G+PC CG+ I + A GR T++C Sbjct: 215 IQAEGSSFDAGYRTVLGLEGGFLAENAMYGRGGQPC-PGCGEPILKTRIAGLIGRPTYFC 273 Query: 285 TYCQ 288 CQ Sbjct: 274 PICQ 277 >gi|149922422|ref|ZP_01910855.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816702|gb|EDM76193.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 302 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 131/304 (43%), Gaps = 53/304 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP++ + +L + T++ + LH LR P S A GK+ VSR K Sbjct: 1 MPELPDITLYVEHLRRRVVGETLSRLQILHPFVLRSVEPSLGSLA--GKRATGVSRLGKR 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRV- 114 +++ LEG + +++HL ++G + + + +H ++LT + ++ V Sbjct: 59 VVLTLEGEVHVVIHLMIAGRLHWKAPGAKLGSKRTLLAAHFDHGALTLTEAGSKRRASVH 118 Query: 115 --------IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 +DP G +D+ E S + F A +N Sbjct: 119 LALGAEGLAAHDP---GGVDVFEAS----------------SSEFGA-----AIQARNHT 154 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK AL + +I+ GIGN Y E L AKLSPI+ T L I+ + Sbjct: 155 LKRALTDPRILDGIGNAYSDEILHAAKLSPIKWTSRLSAAE----------IEALHAACK 204 Query: 227 DAIDAGGSSLRDYV--HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++A + LR+ + F+ +V+GK GEPC CG ++RIV A R T YC Sbjct: 205 SCLEASTARLREDFGEGFPSKVTAFRADMAVHGKYGEPC-PECGDPVQRIVYASRETNYC 263 Query: 285 TYCQ 288 CQ Sbjct: 264 ATCQ 267 >gi|302562223|ref|ZP_07314565.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302479841|gb|EFL42934.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 287 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + + + ++ +D P A G+++I V R K Sbjct: 1 MPELPEVEALRDFLSEHLVGHEIVRVLPVAISVLKTYDPPL---TALEGREVIAVHRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTNT 109 +L +E +G + HL +G + + +P + P V + LT Sbjct: 58 FLGLETDGGPYFVTHLARAGWLQWKDRLPSGPPRPGRGPLALRVALETGAGFDLTEAGTQ 117 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + DP + P + LGP+P F+ L + LK Sbjct: 118 KRLAVYVVADP--------------AEVPGVARLGPDPLAGDFDERRLADLLSGERRRLK 163 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AG+GN Y E L A++SP + SL T +L + ++ L +A Sbjct: 164 GALRDQGLIAGVGNAYSDEILHAARMSPFKLAASLTPEETT------RLYEALRGTLTEA 217 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++ R G + ++ V+G+TGEPC CG +R + + S YC C Sbjct: 218 VE------RSRGVAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|332997432|gb|EGK17048.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 123 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 7/130 (5%) Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 ++ + +K L++ K+V G+GNIY E+L+ A + P R SL + ++L ++I+ Sbjct: 1 MREEKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSL---SLAECELLARVIK 57 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R Sbjct: 58 ---AVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQR 113 Query: 280 STFYCTYCQK 289 +TFYC CQK Sbjct: 114 ATFYCRQCQK 123 >gi|169628133|ref|YP_001701782.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC 19977] gi|169240100|emb|CAM61128.1| Putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus] Length = 287 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 45/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L T+ I + ++ FD P A G+ + +R K Sbjct: 1 MPELPEVEALADHLRRHATGATIGRIDISALSVLKTFDPP---ITALHGQPVTGATRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL ++ G+L ++ HL +G A P+K P + + RV Sbjct: 58 YLGLQ-AGDLYLVTHLSRAGWLRWSDKLAAAPLK-PGKGPIAL-----------RVHLGT 104 Query: 119 PRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 P DL E + + P + +LGP+ S A L + L Sbjct: 105 PGDAPGFDLTEAGTQKRLAVWVVRDPAAVPQIASLGPDAL--SLTADGLADILAGTTARL 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 KN + +Q++++GIGN Y E L AKLSP ++L + L L + +Q VL D Sbjct: 163 KNVITDQRVISGIGNAYSDEILHVAKLSPFASGKTLSEGQ------LTALYEAMQSVLTD 216 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ R ++ G ++ V+ + G PC CG ++R + A +S YC Sbjct: 217 AVE------RSVGQQAATLKGEKRSGLRVHARAGMPC-PVCGDVVREVSFADKSFQYCPT 269 Query: 287 CQ 288 CQ Sbjct: 270 CQ 271 >gi|295835423|ref|ZP_06822356.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] gi|197696491|gb|EDY43424.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] Length = 287 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/300 (27%), Positives = 122/300 (40%), Gaps = 41/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + T + ++ +D P +A G ++ V R K Sbjct: 1 MPELPEVEALRDFLDTHLVGRTPARVLPVAVSVLKTYDPP---PSALVGHEVTAVRRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT---------NNTNT 109 +L + +G ++ HL +G + A P K P + + L T Sbjct: 58 FLALGTDGGPHLVTHLARAGWLRWQDEVPAAPPK-PGRGPLALRLVLDDGSGFDLTEAGT 116 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 +K +Y T+ P + LGP+P F+ + LK Sbjct: 117 QKRLAVYV------------TADPMTVPGIARLGPDPLAPGFDRAAFAALLRGERRQLKG 164 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 AL +Q +VAG+GN Y E L AKLSP + L + D LY + ++ L +A+ Sbjct: 165 ALRDQSLVAGVGNAYSDEILHAAKLSPFKNAGRLTEEE---TDRLY---EALRTTLTEAV 218 Query: 230 DAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R G + ++ V+G+TGEPC CG IR + A S YC CQ Sbjct: 219 ------TRSRGIAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|163839232|ref|YP_001623637.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952708|gb|ABY22223.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 294 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 64/315 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII-----DVSR 55 MPELPE+ + L V++ + + + F +A + ++I+ V R Sbjct: 1 MPELPELVGLSTYLSSVLRGQLLESLQIA------SFTALKTAGVQPEEILRRAVESVRR 54 Query: 56 RAKYLLIELEGNLS------IIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTNNTN 108 K++ IE + S +I HL +G S KP ++T Sbjct: 55 HGKFVDIEFGASASDPSGIHLIFHLAKAGWLKYAAKSAGEKPAPVKPGGYITA------- 107 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY-----------QYPPLRTLGPEPADNSFNAIYLT 157 R+I+ND + +DL E + + P + TLGP+P + F L Sbjct: 108 ----RMIFNDAK----IDLTEAGTRKSLAIYLVRSQDEVPGIITLGPDPLSDEFTLEVLK 159 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 K + +K+ L +QK++AGIGN Y E L A+LSP + SL + D + L Sbjct: 160 AILAPKRAQIKDVLRDQKMIAGIGNAYSDEILHLARLSPFAASNSLTE------DQMAAL 213 Query: 218 IQEIQKVLIDAIDAG----GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 Q I+ +L +A++A S L+D ++ V+ +TG+ C CG +R Sbjct: 214 YQSIKSILREAVEAASGRPASDLKDTK---------RSGMRVHARTGQDC-PECGDTVRE 263 Query: 274 IVQAGRSTFYCTYCQ 288 + A R+ YC CQ Sbjct: 264 VAFADRTLQYCPRCQ 278 >gi|328886861|emb|CCA60100.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 290 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 42/302 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G ++ ++R K+L Sbjct: 1 MPELPEVEALRAFLDTHLVGKEIARVLPVAISVLKTYDPPLSA-VEGAEVTAIARHGKFL 59 Query: 61 LIELEG---NLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTN 108 + G L ++ HL +G + + KP K P ++ LT Sbjct: 60 DLTTTGPGGELHLLFHLARAGWLRWQDPLPSGPPKPGKGPLALRTALTGGDGFDLTEAGT 119 Query: 109 TKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 TK+ V + DPR + P + LGP+P F + + Sbjct: 120 TKRLAVYVVRDPR--------------EVPGVARLGPDPLAEDFGPAEFAALLAGERRQI 165 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K AL +Q ++AGIGN Y E L AK+SP + T++L TP + L ++ L + Sbjct: 166 KGALRDQSLIAGIGNAYSDEILHAAKMSPFKPTQNL-----TPTET-AALYAAMRTTLHE 219 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ R + G + ++ V+G+TGEPC CG IR + + S YC Sbjct: 220 AVE------RSHGLAAGRLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPT 272 Query: 287 CQ 288 CQ Sbjct: 273 CQ 274 >gi|147921120|ref|YP_685069.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] gi|56295548|emb|CAH04791.1| formamidopyrimidine-DNA glycosylase [uncultured archaeon] gi|110620465|emb|CAJ35743.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] Length = 269 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 36/296 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + ++ T+ DI + ++ F GK+I + R K++ Sbjct: 1 MPELPEIYNLAMQMNKELQGKTIADIEIVQEKCLNVNSAEFRDLLTGKRIGETRSRGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +++++LGM G + +P P+ + K + Y D Sbjct: 61 FTAAGEDRTLLLNLGMGGDVLYH-----RPGSEPEGKY------------KLKFTYTDAS 103 Query: 121 R-------FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 FG++ +V+ + + LG P + F K +LK LL+ Sbjct: 104 ALSINFWWFGYVHIVKNNELKSHKMTSALGISPIEPEFTFDCFKKLLSGKRCSLKTLLLD 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QKI+AGIGN+Y + L+ A+L P RK R L D + +L + I L +A GG Sbjct: 164 QKIIAGIGNVYAQDILFTARLHPDRKVRQL------SDDEIERLFKSIIGNLHNAAAHGG 217 Query: 234 SSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D +GSI ++F V K G+PC C I +I +++ C CQ Sbjct: 218 LKFEKDLYGHNGSI----DSFLVGYKEGQPC-PVCNTTIEKIKTGSTASYICPKCQ 268 >gi|227354782|ref|ZP_03839199.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165100|gb|EEI49931.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 116 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL + D+L + I+ VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKASSLTEQEC---DVL---VNAIKAVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKACLI-CGHTIESIKQGQRSTFFCRHCQ 110 >gi|325918780|ref|ZP_08180868.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325535007|gb|EGD06915.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA +SP+R+ + + L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGISPLREAGKV------SLERYRSLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R+T +C +CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQRATVWCGHCQR 111 >gi|271963707|ref|YP_003337903.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270506882|gb|ACZ85160.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 263 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 34/259 (13%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P H +A G+ +++ R K+LL ++G L++ HL M GS+ I + P Sbjct: 28 FRVPRHATADLTGRAVLETVSRGKHLLTRVDGGLTVHTHLRMEGSWRISPAG-----RRP 82 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 V + N + + V R G +DLV T +++ + LGP+P ++ Sbjct: 83 PSGDVVRLVLANADWQAVGV------RLGMVDLVATGEEHRL--VGHLGPDPLGPDWDPA 134 Query: 155 YLTHQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + + ALL+Q+ +AGIG +Y E L+ A +SP R G +D+ Sbjct: 135 EAVRRLMGSPGLTIGEALLDQRNLAGIGTVYRAETLFLAGVSPWRPV-------GEVEDV 187 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 +++ Q++L A G R D G ++ + VYG+ G PCL CG+ I R Sbjct: 188 -RRIVALAQRLL----HANGERERRVTTGDARPG--RDTW-VYGRAGRPCL-RCGRRISR 238 Query: 274 IVQAG----RSTFYCTYCQ 288 R F+C +CQ Sbjct: 239 GEMGAQPQERLIFWCRHCQ 257 >gi|317126518|ref|YP_004100630.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] gi|315590606|gb|ADU49903.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] Length = 302 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 38/292 (13%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + R + + + ++ +LR+ P +A RG++ ++V R K+LL Sbjct: 1 MPEGDTVWRTAHRLDQALAGREVV--ESDLRW--PTLATADLRGRRTLEVVSRGKHLLHR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKP-IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 LEG L++ HL M G + IE T KP + H ++ + T R Sbjct: 57 LEGGLTLHSHLRMEGQWRIEPTPRLKPGWRRSPHLRALLATADWTALGL---------RL 107 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +DLVETS + + LGP+ + ++ + ALL+Q+ +AG+G Sbjct: 108 GMLDLVETSREADL--VGHLGPDLLGDDWHPDRAVDHLAACAVPIGEALLDQRNLAGLGT 165 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH- 241 ++ E L+ +L P +L G P L +++ ++ IDAG RD V Sbjct: 166 LWTAETLFALRLHPWADASTL----GRPA--LEEVVDRAHRL----IDAG---RRDAVQS 212 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 GS+ + + V+G++G PC CG + R+ G R+ FYC CQ Sbjct: 213 ATGSLAKGETTY-VHGRSGRPC-RRCGTTV-RVALIGPATRERTMFYCPSCQ 261 >gi|327541806|gb|EGF28318.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 300 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 27/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMK-NMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + R + ++ + D+ C R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISPIVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN--NTNTKKYRVI 115 K +++ + +++ M+G ++ A P +P H + I + N +T + R I Sbjct: 61 KRVMLCFDDQSRLVIEPRMTGLVLL-----ADP-PDPDHLRLRIQFRSPHNGSTMRSREI 114 Query: 116 YN-----DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R G + + T Y LGP+ S A L +K A Sbjct: 115 PTEMLVWDRRGLGTIRWM-TERDYLEKVDSRLGPDAM--SITAEQLRENLAASKRPIKVA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q VAGIGN+Y E L+ A + P + L K ++ I VL DAI+ Sbjct: 172 LLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLT------KPQWERIHPAITLVLQDAIN 225 Query: 231 AGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C CQ Sbjct: 226 HEGSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGCQ 285 Query: 289 K 289 + Sbjct: 286 R 286 >gi|296269082|ref|YP_003651714.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296091869|gb|ADG87821.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 261 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 32/259 (12%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P H +A RG+ ++ R K+LL +EG L+I HL M G + I+ +PI P Sbjct: 28 FRVPRHATADLRGRAVLTTVSRGKHLLTRVEGGLTIHTHLRMDGRWRIDR--AGRPI--P 83 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 + V + L N T ++ + R G +L+ T + + + LGP+P ++A Sbjct: 84 GGDVVRLILANET----WQAVGI---RLGVTELLPTDREDRV--VGHLGPDPLGPDWDAA 134 Query: 155 YLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + + + ALL+Q+ +AG+G I+ E L+ A++SP R S+ P D Sbjct: 135 WAARNLARAPGRAIGEALLDQRNLAGLGTIWRAETLFAARMSPWRAAGSI------PVDE 188 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L L I + L+DA + + + VYG+ G PC CG I R Sbjct: 189 LEALAA-IARELLDA------AKDQPLPVSTGDRRRGRELFVYGRAGRPC-RRCGTPISR 240 Query: 274 ----IVQAGRSTFYCTYCQ 288 R ++C CQ Sbjct: 241 GELGTAPDERLIYWCPVCQ 259 >gi|325962918|ref|YP_004240824.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469005|gb|ADX72690.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 289 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 39/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ TV+ + + + FSA G+ + V R K++ Sbjct: 1 MPELPEVAGLAGFLDEHLRGSTVSKVQIVSFAVLKTADPPFSA-LEGRTVTGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-NPQHNHVTISLTNNTNTKKYRVIYNDP 119 I+ +G +S + HL +G + +K H ++ T P Sbjct: 60 SIDTDG-ISFVFHLARAGWIRFTDSPTDAQLKMGKGHIAARLAFTGP----------GGP 108 Query: 120 RRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R F DL E K P + TLGP+P +F+A L + +K Sbjct: 109 RGF---DLTEAGTKKSLAVYVVRDPQDVPGIATLGPDPFAEAFDAGMLAEILAGSSQQIK 165 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L NQ ++AGIGN Y E L A++SP +SL + +LY I ++ + Sbjct: 166 GLLRNQGVIAGIGNAYSDEILHAARISPFATAKSLDRET---VQVLYNAIHDVLGTAL-- 220 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +A G +D + ++ V+ +TG+PC CG +R + A + YC CQ Sbjct: 221 AEAAGKPPKDLKDVK------RSHMRVHARTGQPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|297204068|ref|ZP_06921465.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197714732|gb|EDY58766.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 287 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 45/302 (14%) Query: 1 MPELPEVEIIRRNLM--MVMKNMT-VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE ++ L +V M V + + +D P A G++++ V R Sbjct: 1 MPELPEVEALKDFLTENLVGHEMVRVLPVAISVLKT-YDPP---LTAVEGREVVAVHRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTN 108 K+L +E +G ++ HL +G + +P K P V + LT Sbjct: 57 KFLDLETDGGPHLVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALETGAGFDLTEAGT 116 Query: 109 TKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 K+ V + DP+ + P + LGP+P F+ + L Sbjct: 117 QKRLAVYVVADPQ--------------EVPGIARLGPDPLAEDFDGERFAALLKAERRQL 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K AL +Q ++AG+GN Y E L A++SP + SL TP++ L + ++ L + Sbjct: 163 KGALRDQTLIAGVGNAYSDEILHAARMSPFKLAASL-----TPEET-ETLYRALRTTLTE 216 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ R G + ++ V+G+TG+PC CG IR + + S YC Sbjct: 217 AVE------RSRGVAAGRLKSEKKSGLRVHGRTGDPC-PVCGDTIREVSFSDSSLQYCPT 269 Query: 287 CQ 288 CQ Sbjct: 270 CQ 271 >gi|304311679|ref|YP_003811277.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] gi|301797412|emb|CBL45632.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] Length = 271 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 38/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ I L + N + ++ F FP +S +I + R K Sbjct: 1 MPEGPEIRRIADQLSAALLNKPLHEVW-------FAFPKLQSYSPQLHRSQITGIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL LS+ H + G +II ++ PI + + V I+ N T T +Y+ Sbjct: 54 ALLTHFSIGLSLYSHNQLYGRWII--STPDDPITSTRSPRVRIAANNVTAT-----LYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH---QFHKKNSNLKNALLNQK 175 ++L T+ +P L+ +GP+ D F + + H Q H NL LL+Q Sbjct: 107 SN----IELWPTNEVQSHPFLQRIGPDVLDKEFTSDQVAHRLLQPHFARRNLGALLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKV--LIDAIDA 231 AG+GN E LWRA+LSP + + L TP+ I L I I ++ + A Sbjct: 163 FFAGLGNYLRAEILWRAELSPSSRPQDL-----TPEKISSLAHAILNIPRLSYATRGLVA 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + DG+ F V+ + G C S CG +I++ R F+C +CQ Sbjct: 218 DSARIAPDPYQDGNFH-----FEVFKREGMLC-SRCGSVIQKATHNARPLFFCAHCQS 269 >gi|29833831|ref|NP_828465.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|29610955|dbj|BAC75000.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 125/300 (41%), Gaps = 42/300 (14%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++ L V+ + V + + L+ +D P A G++I V R K Sbjct: 1 MPELPEVEALKDFLADHVVGHEVVRVLPVAISVLKTYDPP---VTALEGREITAVRRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTNT 109 +L +E +G L + HL G + +P K P V + LT Sbjct: 58 FLDLEADG-LHFVTHLARGGWLHWRDKLPDAPPRPGKGPLALRVALETGEGFDLTEAGTQ 116 Query: 110 KKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K+ V + DP P + LGP+P + F+ + +K Sbjct: 117 KRLAVHVVRDP--------------GDVPGVARLGPDPLADDFDEARFARLLEGERRRIK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AG+GN Y E L AK+SP + T +L + +L ++ L +A Sbjct: 163 GALRDQSLIAGVGNAYSDEILHAAKMSPFKLTSALTAEE------IRQLYAALRTTLTEA 216 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 217 VERSRGLAAGRLKAEKKTG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 270 >gi|56962663|ref|YP_174389.1| hypothetical protein ABC0889 [Bacillus clausii KSM-K16] gi|56908901|dbj|BAD63428.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 267 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 84/289 (29%), Positives = 128/289 (44%), Gaps = 24/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPE+PE+ ++ L + +TD+ ++R+ + P F AA + + + +VSRR K Sbjct: 1 MPEMPEMATYQKWLTRTVVGQMITDVEVNREK-SINVPVVEFKAAVQHQIVTEVSRRGKQ 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L N +++ M G ++ T P + Q V +S + + +Y Sbjct: 60 LLFHL-ANGHMLLLHLMLGGWMYWGTEEDAPDRTKQ---VILSFSRHK-------LYFIG 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G++ L + + P L LGPE + S NA K + +K L NQ ++G Sbjct: 109 LRLGYIHLHDQ--QSAKPILAKLGPEAS--SINADEFKKIAKHKRTMVKPFLTNQAHLSG 164 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + AK+ P+R SL L L Q I L A DAGG + Sbjct: 165 IGNCYADEICYHAKMIPLRTIDSLSSKE------LAALHQAIAPTLQAAADAGGYMSHPF 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE C CG I R + ++ F+C CQ Sbjct: 219 TSSDRLTGGMNSKLYVYDREGEACF-RCGNPIIRQEASKKNVFFCQVCQ 266 >gi|239945857|ref|ZP_04697794.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239992325|ref|ZP_04712989.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291449313|ref|ZP_06588703.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291352260|gb|EFE79164.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A R ++ V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLTALER-TRVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + P + + L T+ + + + Sbjct: 60 DIE-AGGLHLCTHLARAGWLRWKDSFPAAPPR-PGKGPLALRLVT-TDGDGFDLTEMGTK 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV + P + TLGP+P ++F+ +K AL +Q ++AGI Sbjct: 117 KSLSVHLVHDPV--DVPRIATLGPDPLADTFDRDAFAALLAGARRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L +++ T +L ++ + DA+D + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLTEDDVT------RLYTALRTTVRDAVDRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|306818563|ref|ZP_07452286.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] gi|304648736|gb|EFM46038.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] Length = 237 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 35/243 (14%) Query: 62 IELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +EL GN + HLGMSG + A I H + +L N +++ D R Sbjct: 1 MELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LELVFCDQR 51 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA--------------DNSFNAIYLTHQFHKKNSN 166 FG ++ P +G E A D + + ++ + Sbjct: 52 TFGHTEVRALEPTTDGAP-GGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRA 110 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q V+GIGNIY E L+ A + P R+L + L L++ V+ Sbjct: 111 IKTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGED------LRNLLEVAASVMR 164 Query: 227 DAIDAGGSSLRDYVHID--GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A++ GG+S D +++D G+ G F + VYG+ G+ C CGQ + +IV GR+T +C Sbjct: 165 HALEFGGTSF-DQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRATVFC 222 Query: 285 TYC 287 +C Sbjct: 223 AHC 225 >gi|226361374|ref|YP_002779152.1| DNA glycosylase [Rhodococcus opacus B4] gi|226239859|dbj|BAH50207.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 288 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 127/305 (41%), Gaps = 50/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V D+ FD P A +G+ + +R K Sbjct: 1 MPELPEVEALAEFLRKHAVGAVVGRVDVAALSVLKTFDPP---ITALQGRDVTGAARFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------------NPQHNHVTISLTN 105 +L ++ G L ++ HL G P K P+ LT Sbjct: 58 HLALDCSG-LWLVTHLSRGGWLRWTDNPSVAPPKPGKGPLALRVHFFTPEGATPAFDLTE 116 Query: 106 NTNTKKYRV-IYNDPRRF-GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 K+ V + +DPR G L +L P F A+ T Sbjct: 117 AGTKKRLAVWLVHDPREVEGIARLGPDALAVTEP------------EFAALLST-----T 159 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++ +KNAL++Q ++AG+GN Y E L AK+SP +R+L P+D ++ L ++ Sbjct: 160 SARIKNALVDQSLLAGVGNAYSDEILHTAKISPFATSRTL------PEDQVHVLYDAMRS 213 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL DA++ S +D + G ++ V+ +TG PC CG +R + A +S Y Sbjct: 214 VLTDAVER--SLGQDAARLKGEK---RSGMRVHARTGLPC-PVCGDTVREVSFAEKSFQY 267 Query: 284 CTYCQ 288 C CQ Sbjct: 268 CATCQ 272 >gi|296129351|ref|YP_003636601.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] gi|296021166|gb|ADG74402.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] Length = 296 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 132/313 (42%), Gaps = 58/313 (18%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L V + +T ++ F P A RG +++ SR K Sbjct: 1 MPELPEVEALAQFLGERAVGRAVTRVEVAAISALKTFRPP---PTALRGGTVLEASRHGK 57 Query: 59 YLLIEL----EGNLSIIVHLGMSGSFIIEHTSC----AKPIKNPQHNHVTIS------LT 104 +L + + +G L ++ HL +G ++ + + A+P K+P V LT Sbjct: 58 WLDLSVGSLADGTLHVVWHLSRAG-WVRWYDALPERPARPGKSPLALRVGFDDGSGFDLT 116 Query: 105 NNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 K+ V + DP P + TLG EP ++F L + Sbjct: 117 EAGTRKRLAVHVVADP--------------ADVPQIATLGVEPLSDAFTPERLGELLAAR 162 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K L +Q +AGIGN Y E L A+ SP TRS + +L I++ Sbjct: 163 NQQVKGLLRDQGTIAGIGNAYSDEILLVARTSPFAPTRSYDEAR------TRRLHTAIRE 216 Query: 224 VLIDAID--AG--GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIRRIV 275 VL +A+ AG + L+D + V+G+TGEPC + CG + + Sbjct: 217 VLTEAVTTAAGRPAAELKDAK---------RRGMRVHGRTGEPCPGWDGTPCGDTVHEVS 267 Query: 276 QAGRSTFYCTYCQ 288 A S YC CQ Sbjct: 268 FADSSLQYCPTCQ 280 >gi|14571863|gb|AAK67295.1|AF279677_1 formamidopyrimidine-DNA glycosylase [Brucella abortus] Length = 63 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTY 286 AI A GSSL+DY+ DG++GYFQ++FSVYG+ G+PC + CG + R+VQ+GRSTF+C Sbjct: 1 AIAAEGSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCAS 60 Query: 287 CQ 288 CQ Sbjct: 61 CQ 62 >gi|325923755|ref|ZP_08185372.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] gi|325545753|gb|EGD16990.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] Length = 111 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA LSP+R+ + D +L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGLSPLREAGKV------SLDRYRRLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ G+ C CG++++ R+T +C CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGKAC-KQCGRVLKHATIGQRATVWCGSCQR 111 >gi|323173227|gb|EFZ58856.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] Length = 111 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY E+L+ A + P R SL + ++L ++I+ VL+ +I+ Sbjct: 1 MDNKLVVGVGNIYASESLFAAGIHPDRLASSL---SLAECELLARVIK---AVLLRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 111 >gi|48243750|gb|AAT40850.1| putative formamidopyrimidine-DNA glycosylase [Haemophilus influenzae] Length = 116 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L++ +V G+GNIY E L+ L P + SL K +L+++I++VL + Sbjct: 1 KTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLT------KAQCGQLVEQIKQVLSN 54 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI GG++L+D++ DG GYF VYG +PC CG I +V R++FYC C Sbjct: 55 AIQQGGTTLKDFLQPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKC 113 Query: 288 QK 289 QK Sbjct: 114 QK 115 >gi|54026994|ref|YP_121236.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54018502|dbj|BAD59872.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 289 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 86/305 (28%), Positives = 129/305 (42%), Gaps = 49/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L V D+ FD P A G+ + +R K Sbjct: 1 MPELPEVEALAQFLREHAVGAVVGRVDVAALSAVKTFDPP---VTALSGRDVSGAARWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSG--SFIIEHTSCA------KPIK------NPQHNHVTISLT 104 +L ++ G L +I HL G +I E P+ P+ LT Sbjct: 58 FLGMDCSG-LWLITHLSRGGWLRWIDEPNPNPPKPGGKSPLALRVHFFTPEGATPAFDLT 116 Query: 105 NNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 K+ V + +DP+ LV P + LGP+ + S H Sbjct: 117 EAGTKKRLAVYVVDDPK------LV--------PGIARLGPDALEVS--EPQFAELLHGT 160 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + LK AL++Q ++AGIGN Y E L AK+SP T++L P + + +L ++ Sbjct: 161 SQRLKTALVDQALLAGIGNAYSDEILHTAKISPFANTKTL------PAEKIAELYAAMRA 214 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL DA+ S +D + G ++ V+ +TG+PC CG +R + A RS Y Sbjct: 215 VLTDAVQR--SVGQDAARLKGEK---RSGMRVHARTGQPC-PVCGDTVREVSYAERSFQY 268 Query: 284 CTYCQ 288 C CQ Sbjct: 269 CPTCQ 273 >gi|269956005|ref|YP_003325794.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269304686|gb|ACZ30236.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/309 (29%), Positives = 127/309 (41%), Gaps = 48/309 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + TV D+ FD P A G + +R K Sbjct: 1 MPELPEVEGLVRFLDERSRGRTVAAADVGNIAALKTFDPPL---TALVGATVRGWARHGK 57 Query: 59 YL-----LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTK 110 +L + + + ++VHL G T+ +P I+L Sbjct: 58 WLDLRTFTFDDDADPHLLVHLSRGGWLRWYDQVPTTTVRPRLGGSARGAVIAL------- 110 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQ 159 RV ++D F DL E + + P + TLGPEP D +F L Sbjct: 111 --RVRFDDGTGF---DLTEAGTQKRLAVHVVRDPRDVPQVATLGPEPLDPAFTVEALRAL 165 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 KN +K L +Q +AGIGN Y E L A+ SP + TRS TP D+ +L Sbjct: 166 LGAKNQQVKGLLRDQGAIAGIGNAYSDEILHVARFSPFKLTRSF-----TPDDV-ARLHA 219 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I L A+ A SS + + + + V+G+TG+ C CG +R + A R Sbjct: 220 AIVDTLTGAVAA--SSGKPAKELKDAK---RAGMRVHGRTGQAC-PVCGDTVREVSFADR 273 Query: 280 STFYCTYCQ 288 S YC CQ Sbjct: 274 SLQYCATCQ 282 >gi|326329312|ref|ZP_08195637.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] gi|325952887|gb|EGD44902.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 57/308 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L +K+ +T + + + + +D P A G + +V+R K Sbjct: 1 MPELPEVEALAEDLRGRLKDRAITKVHVAQFSALKTYDPPL---TAVEGTLVDNVTRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS--LTNNTN-------T 109 ++ IE G + +++HL G A P + + + I L ++T T Sbjct: 58 FIDIEASG-IHLVLHLARGGWIRWRDEVPATPPRPGSKSGLAIRVVLDDDTGLDITEGGT 116 Query: 110 KKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSN 166 KK +Y +DP+ P + +LGP+P + F A + + Sbjct: 117 KKRLALYVVHDPQ--------------DVPGVASLGPDPLADDFTLARFREILAGQGRKQ 162 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K L Q I+AGIGN Y E LW AK+SP + ++ +E + L Sbjct: 163 IKGVLRMQSIIAGIGNAYSDEILWAAKMSPFKPA---------------EMTEEESESLY 207 Query: 227 DAIDAGGSSLRDYVHIDGSI------GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 DA+ ++L++ V D + G ++ +V+GK G+ C CG I + A S Sbjct: 208 DALR---TTLKEAVERDSGLAMSELKGEKKSNLAVHGKAGKKC-PVCGSTILEVSFADSS 263 Query: 281 TFYCTYCQ 288 YC CQ Sbjct: 264 LQYCPTCQ 271 >gi|302523189|ref|ZP_07275531.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302432084|gb|EFL03900.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 278 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 38/253 (15%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS- 102 G ++ DV R K+L + +G ++ HL +G + + KP + P + + Sbjct: 37 GHEVTDVRRYGKFLDVVTDGGPHLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDD 96 Query: 103 -----LTNNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 LT K+ V + +DPR P + LGP+P F+ Sbjct: 97 GSGFDLTEAGTQKRLAVYVVDDPR--------------TVPGIARLGPDPLAPGFDRAAF 142 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + LK AL +Q +VAG+GN Y E L AKLSP + L + + + Sbjct: 143 AELLRGERRQLKGALRDQSLVAGVGNAYSDEILHAAKLSPFKNAGRLTEEETS------R 196 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L + ++ L +A+ R GS+ ++ V+G+TGEPC CG IR + Sbjct: 197 LYEALRTTLTEAV------ARSRGIAAGSLKAEKKSGLRVHGRTGEPC-PVCGDTIREVS 249 Query: 276 QAGRSTFYCTYCQ 288 A S YC CQ Sbjct: 250 FADSSLQYCPTCQ 262 >gi|32474898|ref|NP_867892.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32445438|emb|CAD75439.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 300 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 132/301 (43%), Gaps = 27/301 (8%) Query: 1 MPELPEVEIIRRNLMMVMK-NMTVTDI--CLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + R + ++ + D+ C R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISPIVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL--TNNTNTKKYRVI 115 K +++ + +++ M+G ++ A P +P H + I +N +T + R I Sbjct: 61 KRVMLCFDDQSRLVIEPRMTGLVLL-----ADP-PDPDHLRLRIQFRSPHNRSTMRSREI 114 Query: 116 YN-----DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R G + + T Y LGP+ A L +K A Sbjct: 115 PTEMLVWDRRGLGTIRWM-TERDYLEKVDSRLGPDAM--CITAEQLRANLAASKRPIKVA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q VAGIGN+Y E L+ A + P + L K ++ I VL DAI+ Sbjct: 172 LLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLT------KPQWERIHPAITLVLQDAIN 225 Query: 231 AGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C CQ Sbjct: 226 HEGSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGCQ 285 Query: 289 K 289 + Sbjct: 286 R 286 >gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 287 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 26/288 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EVE R+ + VT + LH K R P A G + AK Sbjct: 1 MPELAEVEFFRKRWDHAARGRRVTAVRLHPHAKIFRGTSPSTLRHALTGAVLESSDAAAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGMSG +E C +H+H+ + +T K+ +++ND Sbjct: 61 QMLFRFSDEIWLGVHLGMSGELRVEPAGC----PAGRHDHLVL------DTAKHALVFND 110 Query: 119 PRRFGFMDLVETSLKYQYPPL--RTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQK 175 PR FG + L + PP+ + P +F + H++ + +K LL Q+ Sbjct: 111 PRMFGRVLLHRGA----EPPVWWTKIAPPILSAAFTPAAVREFLHRRGRAPIKAVLLMQE 166 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN E LWRA + P SL + L++ + + ++ +D I G S Sbjct: 167 RFPGIGNWMADEILWRAGIHPRTAAGSLTEAQ---SKTLWREARHVCRMALDTIAGRGRS 223 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L ++++ + F + G C G ++ R GR+T + Sbjct: 224 LPRDLNVNIPDTWL---FHHRWQPGGRC-PRTGVLLERAEIGGRTTCW 267 >gi|301300324|ref|ZP_07206529.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852060|gb|EFK79739.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 133 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 23/141 (16%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + ++ +KNALL+Q IVAG+GNIY E LW +K+ P TP + Sbjct: 4 FSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHP-----------ETPAN--- 49 Query: 216 KLIQEIQKVLID--------AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 KL +E KVL D A +AGG+++R Y G FQ + Y +TG+PC C Sbjct: 50 KLTEEEVKVLRDNIIKELALATEAGGTTIRSYTDAFRHSGGFQFSLHAYQRTGDPC-ERC 108 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 G I+RIV R T +C CQ Sbjct: 109 GTPIQRIVVGQRGTHFCPKCQ 129 >gi|229495049|ref|ZP_04388795.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] gi|229317980|gb|EEN83855.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] Length = 288 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 48/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V DI FD P A +G+ + +R K Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPP---ITALQGRDVTGAARFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------------NPQHNHVTISLTN 105 +L ++ +G L ++ HL +G A P K P+ + LT Sbjct: 58 HLALDCDG-LWLVTHLSRAGWMRWLDNPSATPPKPGKGPLALRVHFFTPEGSTPAFDLTE 116 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K+ V + NDP+ + P + LGP+ + + Sbjct: 117 AGTKKRLAVWVVNDPQ--------------EVPGIARLGPDAM--AVTEAEFAQILGGTS 160 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +KN++++Q ++AGIGN Y E L AKLSP + L TP D + L ++ Sbjct: 161 ARIKNSIVDQSLIAGIGNAYSDEILHTAKLSPFATSSRL-----TP-DQISTLYAVMRST 214 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L DAI+ S +D + G ++ V+ +TG PC CG ++R + A RS YC Sbjct: 215 LADAIER--SEGQDAARLKGEK---RSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYC 268 Query: 285 TYCQ 288 CQ Sbjct: 269 ATCQ 272 >gi|84495570|ref|ZP_00994689.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84385063|gb|EAQ00943.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 286 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 42/300 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L ++ VT + L ++ F+ P A G I VSR K Sbjct: 1 MPELPEVQALVDFLSTRTADLAVTGVELGSISVLKTFNPPPE---ALVGAPIDSVSRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSG----SFIIEHTSCAKPIKNPQHNHVTISLTNN-----TNT 109 +L ++ G ++ HL +G S + T +P K+P V +S + T Sbjct: 58 FLDLDC-GGTHLVFHLARAGWLRWSDALSSTRL-RPGKSPIALRVRLSDGSGFDLTEAGT 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 KK Y S P + LGP+P ++F+ +N+ LK Sbjct: 116 KKSLAAYI------------VSSPSDVPGIARLGPDPLSDAFSLKVFREILGGRNAQLKG 163 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L +Q I+AG+GN Y E L AKLSP L + LY +++ + A Sbjct: 164 VLRDQSIIAGVGNAYSDEILHVAKLSPFAMAAKLDDEQ---TERLYAALRDTLSAAVGAA 220 Query: 230 DAG-GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + L+D + V+G+TGE C CG ++R + A S YC CQ Sbjct: 221 TGKPAAELKDAK---------RQGMRVHGRTGETC-PECGDVVREVSFADSSLQYCATCQ 270 >gi|156186050|gb|ABU55343.1| formamidopyrimidine-DNA glycosylase [Callosobruchus chinensis] Length = 131 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 21/137 (15%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H+HV ++NT+ +I+NDPRRFG + ++ + + G EP + F+ Sbjct: 12 KHDHVVFLFSDNTS-----IIFNDPRRFGLVIILSKEQEINF--FDGFGIEPLTDEFSGD 64 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL KK N+K+AL++ K++ G+GNIY E+L+RA++SP+R + KD+ Sbjct: 65 YLQELLKKKKVNIKSALMDDKLIVGVGNIYASESLFRARISPLR----------SAKDLT 114 Query: 215 Y----KLIQEIQKVLID 227 Y KL EI+ L D Sbjct: 115 YRECEKLAAEIKNTLSD 131 >gi|302538173|ref|ZP_07290515.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302447068|gb|EFL18884.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 286 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 126/302 (41%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L + V + L L+ +D P AA G+ V+R K Sbjct: 1 MPELPEVEALREFLDEHLAGRVVERVLPLAVSVLKTYDPP---PAALEGQPAGPVARYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT---------NNTNT 109 +L + + G L ++ HL +G A+P + P + + L T Sbjct: 58 FLALRV-GGLHLVTHLARAGWLRWREEFPAQPPR-PGKGPLALRLVLEGGGGFDLTEAGT 115 Query: 110 KKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 +K +Y +DP+ + P + LGP+P + F + + Sbjct: 116 QKRLAVYVVHDPQ--------------EVPGIARLGPDPLADGFGREAFAALLAGERRQI 161 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L +Q ++AGIGN Y E L AK+SP + S + T L ++ L + Sbjct: 162 KGVLRDQSVIAGIGNAYSDEILHAAKVSPFKLAASFDEEQVT------HLYGAVRDTLRE 215 Query: 228 AID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ A G + +D ++ V+G+ GEPC CG +R + A S YC Sbjct: 216 AVERAHGLAAQDLK------AEKKSGLRVHGRDGEPC-PVCGDTVRSVSFADSSLQYCPT 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|331695858|ref|YP_004332097.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326950547|gb|AEA24244.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 268 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 32/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + V R P ++ G + RR K + Sbjct: 1 MPELPEVESARRVLEHALDRRIVAVDDTDEWVCRPHPPGEIASVLVGGTLTAAHRRGKAM 60 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 E + + +HLGM G ++ + +P+ + ++ V Sbjct: 61 WCETRDEHGDDGPHLGLHLGMGGHLVVTDADDVRAGGDPRPD----GSQGRPEWNRFTVT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++D D P + LGP+ A L + + ++ +K LL+QK Sbjct: 117 FDDGGELRLFDKRRLGRVRLDPDIDALGPDA--EEITAAGLRERLRRSHAPVKARLLDQK 174 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAGIGN+ E LW+A+++P R L + + +L + +++ L AI+ GG Sbjct: 175 VVAGIGNLLADETLWQARIAPSRPADELDRTE------VNRLHRNLERALRSAIEKGG-- 226 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VH G + + A + G P M+ V GRST++C+ Q Sbjct: 227 ----VHT-GRVIAHRRADGACPRCGAP-------MVHGTV-GGRSTWWCSAEQ 266 >gi|111019239|ref|YP_702211.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110818769|gb|ABG94053.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 288 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 126/305 (41%), Gaps = 50/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V D+ FD P +G+ + +R K Sbjct: 1 MPELPEVEALAEFLREHAVGAVVGRVDVAALSVLKTFDPP---ITGLQGRDVTGAARFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------------NPQHNHVTISLTN 105 +L ++ G L ++ HL G A P K P+ LT Sbjct: 58 HLALDCSG-LWLVTHLSRGGWLRWTDNPSAAPPKPGKGPLALRVHFFTPEGATPAFDLTE 116 Query: 106 NTNTKKYRV-IYNDPRRF-GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 K+ V + +DP+ G L +L P F A+ T Sbjct: 117 AGTKKRLAVWVVHDPQEVEGIARLGPDALAVTEP------------EFAALLST-----T 159 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++ +KNAL++Q ++AG+GN Y E L AK+SP +R+L P+D ++ L ++ Sbjct: 160 SARIKNALVDQSLLAGVGNAYSDEILHTAKISPFATSRTL------PEDQVHVLYDAMRS 213 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL DA+ S +D + G ++ V+ +TG PC CG IR + A +S Y Sbjct: 214 VLSDAVQR--SLGQDAARLKGEK---RSGMRVHARTGLPC-PVCGDTIREVSFAEKSFQY 267 Query: 284 CTYCQ 288 C CQ Sbjct: 268 CATCQ 272 >gi|225629725|ref|ZP_03787686.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591420|gb|EEH12499.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 117 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 11/126 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +G++++I+HLGMSG I +H +H+HV ++NT+ +I+NDP Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQMRN-----KHDHVVFLFSDNTS-----IIFNDP 110 Query: 120 RRFGFM 125 RRFG + Sbjct: 111 RRFGLV 116 >gi|116670100|ref|YP_831033.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116610209|gb|ABK02933.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 316 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 82/311 (26%), Positives = 128/311 (41%), Gaps = 54/311 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L ++ +T I + L+ P + A G+ I V RR K+ Sbjct: 21 MPELPEVAGLGAFLGDRLRGAVLTKIQIVSFAVLKTADPPY--TALEGRTISGVQRRGKF 78 Query: 60 LLIELEGNLSIIVHLGMSGSF-IIEHTSCA------------------KPIKNPQHNHVT 100 ++I+ +G + + HL +G E S A +P + H+ Sbjct: 79 IIIDADG-IYLAFHLAKAGWLRYTESPSNALLPRGKGYIAARFEFSRIRPDADGGEAHLG 137 Query: 101 ISLTNNTNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 I LT TKK +Y DP P + +LGP+P SF Sbjct: 138 IDLTE-AGTKKSLALYVVRDPE--------------DIPGIASLGPDPLSASFTLDAFAE 182 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +K L NQ ++AGIGN Y E L A++SP +SL + +LY + Sbjct: 183 ILSSSSQQIKGLLRNQGVIAGIGNAYSDEILHAARISPFATAKSLDPES---VRVLYDSV 239 Query: 219 QEIQKVLI-DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 I + +A+ + L+D ++ V+G+TG+ C CG +R + A Sbjct: 240 HNILGAAVAEAVGKAPNELKDAK---------RSTMRVHGRTGQAC-PVCGDTVREVSFA 289 Query: 278 GRSTFYCTYCQ 288 R+ YC CQ Sbjct: 290 DRALQYCPRCQ 300 >gi|302537302|ref|ZP_07289644.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446197|gb|EFL18013.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 270 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 23/253 (9%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P +A G+ ++DV+ R K+LL LEG L++ HLGM G++ + K P H Sbjct: 31 PRFATADLTGRTVLDVTPRGKHLLTRLEGGLTLHSHLGMDGAWRL-FAPGEKWRGGPSHE 89 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYL 156 + T T YR+ ++L+ T+ + + + LGP+ ++ A Sbjct: 90 IRAVLSTAGTTAVGYRLP--------VLELLRTADEARA--VGHLGPDLLGPDWDEARAA 139 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + L ALL+Q+ +AGIGNIY CE + A+++P +L P L + Sbjct: 140 ANLLADPGRPLGEALLDQRNLAGIGNIYKCELCFLAQVTPWTPVGALPD----PAATLPR 195 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + Q++L GG+ + GS F VYG+ PCL CG +R Q Sbjct: 196 IAAAAQRLLAANTGHGGAR-----NTTGSRRPGWGLF-VYGRAHRPCL-RCGTPVREAPQ 248 Query: 277 AGRSTFYCTYCQK 289 R T++C CQ Sbjct: 249 DDRPTYWCPRCQS 261 >gi|300782065|ref|YP_003762356.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299791579|gb|ADJ41954.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 286 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 128/302 (42%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + +L T+ I + + L+ P G++I +R K+ Sbjct: 1 MPELPEVEALAHHLRENAVGRTIFRIDVASLSVLKTATPPWTE--LHGREITGATRHGKH 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + + G+L ++VHL +G A P+K P +++ RV Sbjct: 59 LDV-VAGDLHLVVHLARAGWLRWSDGLAAAPLK-PGKGPISL-----------RVHLESA 105 Query: 120 RRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 GF DL E K + + LGP+ + +A L F KN+ LK Sbjct: 106 TGPGF-DLTEAGTKKGLAVWVVKDPQEIASVARLGPDAL--AVDAAQLRELFAGKNTRLK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AGIGN Y E + RAKLSP L + L L + I + DA Sbjct: 163 WALTDQSLLAGIGNAYSDEIMHRAKLSPYATIGKLDEG------ALETLAEAIHDIETDA 216 Query: 229 ID--AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++ G + R G ++ V+ +TG PC CG IR I A +S YC Sbjct: 217 VERSVGQKAARLK-------GEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCPT 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|302531490|ref|ZP_07283832.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302440385|gb|EFL12201.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 128/302 (42%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + +L TV + + + L+ P + G++I +R K+ Sbjct: 1 MPELPEVEALAHHLREHAVGSTVFRLDVASLSVLKTAMPPYTE--LHGREITGATRHGKH 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L G+L ++VHL +G P+K P +++ RV Sbjct: 59 LDVVL-GDLHLVVHLARAGWLRWSDALSPAPLK-PGKGPISL-----------RVHLESA 105 Query: 120 RRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 GF DL E K + + LGP+ + +A L F K + LK Sbjct: 106 SGPGF-DLTEAGTKKGLAVWIVADPAEVASVARLGPDAL--AVDASQLRELFQGKGTRLK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL +Q ++AGIGN Y E + RAKLSP L + L L + I++V DA Sbjct: 163 WALTDQSLIAGIGNAYSDEIMHRAKLSPYATVGKLDEGA------LEVLAEAIREVETDA 216 Query: 229 I--DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + G + R G ++ V+ +TG PC CG IR I A +S YC Sbjct: 217 VSRSVGQKAARLK-------GEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCAT 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|284028154|ref|YP_003378085.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] gi|283807447|gb|ADB29286.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] Length = 287 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 89/303 (29%), Positives = 133/303 (43%), Gaps = 49/303 (16%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 +PELPEVE + L V + + DI +D P +A G I DV R K Sbjct: 3 VPELPEVESLAGFLRERAVGRAVVRADITAISALKTYDPP---ISALVGLLIDDVRRHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTIS------LTNNTNT 109 +L IE +G + +++HL +G + T+ +P K P V + LT Sbjct: 60 FLDIEAQG-VHLVIHLARAGWLRWREQQSTTPVRPGKGPIACRVVLDDESGFDLTEAGTQ 118 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIYLTHQFHKKNSN 166 KK V + D+ E P + LGP+P + F AI H+ + Sbjct: 119 KKLAV-------YVVRDVAEV------PGIARLGPDPFTLSAEDFGAIL--HEAGR--VQ 161 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK L NQ ++AGIGN Y E L A++SP + +L D L+ L +Q+ L Sbjct: 162 LKGVLRNQSVIAGIGNAYSDEILHVARMSPFKPASNL------SDDELHVLYTAMQETLR 215 Query: 227 DAID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DA+D + G + +D ++ V+G+ GE C CG ++R + A S YC Sbjct: 216 DAVDRSKGLAAQDLKS------EKKSGLRVHGRKGEKC-PVCGDVVREVSFADSSLQYCA 268 Query: 286 YCQ 288 CQ Sbjct: 269 TCQ 271 >gi|297162473|gb|ADI12185.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 35/244 (14%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIE-HTSCAKPIKNPQHNHVTISLTN 105 G++ R K+L+ +G ++++H GM+G H P H+ VTI L + Sbjct: 26 GRRFDPPERHGKWLIARTDGP-TVLLHFGMTGDLTCHAHDDPPHP-----HDRVTIVLDD 79 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKN 164 + + Y D R+ + L T R LG + D S + L + ++ Sbjct: 80 GHDLR-----YRDQRKLRGLWLAATDADLD----RILGDQGPDALSVSRAELDKRLAGRH 130 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K L +Q +VAG+GN+ E LWRA ++P R+T L T +L + ++ V Sbjct: 131 GRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDELTPEERT------RLERAMRGV 184 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L+ ++ AG H+ S + +P CG +RR AGR+T +C Sbjct: 185 LLTSVQAG--------HVPTSPSWLTGRRD----DPDPHCPRCGGPLRRSRMAGRTTAWC 232 Query: 285 TYCQ 288 +CQ Sbjct: 233 PHCQ 236 >gi|229821354|ref|YP_002882880.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] gi|229567267|gb|ACQ81118.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] Length = 302 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 128/314 (40%), Gaps = 57/314 (18%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L +V + + I FD P G+ + V R K Sbjct: 4 MPELPEVDALGEFLRERVVGREIVAVHIAQIGALKTFDPPLTDLV---GRTVTGVERHGK 60 Query: 59 YLLIEL-------EGNLSIIVHLGMSG--SFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 +L + L +G ++ HL +G + E + P P + Sbjct: 61 WLDLALGRRGDADDGEPHLVFHLAKAGWLRWKDEMPPASTPAGRP--------MGRRAGP 112 Query: 110 KKYRVIYNDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTH 158 RV +D F DL E + + P+ +LG +P + A L Sbjct: 113 LALRVWLDDGAGF---DLTEAGTRKRLAVHVVGSPEEVGPIASLGFDPR-SELTAERLGA 168 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 +N LK AL +Q +VAGIGN Y E L A++SP T+SL ++ + +L Sbjct: 169 ALRTRNQQLKGALRDQTLVAGIGNAYSDEILHAARMSPFTLTKSLTDDD------VARLT 222 Query: 219 QEIQKVLIDAIDAG----GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 ++VL A+ A + L+D + +V+G+TGE C CG ++R + Sbjct: 223 DATRQVLDAAVAAASGKPAAELKDAK---------RRGMAVHGRTGETC-PVCGDVVREV 272 Query: 275 VQAGRSTFYCTYCQ 288 A RS YC CQ Sbjct: 273 SFADRSLQYCATCQ 286 >gi|322833850|ref|YP_004213877.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] gi|321169051|gb|ADW74750.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] Length = 264 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 120/294 (40%), Gaps = 37/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ L + N +TD+ F FP + +A RG +I + R K Sbjct: 1 MPEGPEIRRAADVLATAVVNKPLTDVW-------FAFPALKPYQSALRGTRITSIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL L++ H + G + ++ K K SL T + ++ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVNAGEVEKETKR--------SLRVKLETTEAAILLY 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQ 174 D E ++P L+ +GP+ D + + N L LL+Q Sbjct: 106 SASEISIYDTAEIE---KHPFLQRIGPDVLDERLTVAQVRERLLSPKFCNRQLGGMLLDQ 162 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN E LW AKL P K + L N T +D L + ++ A Sbjct: 163 AFLAGLGNYLRAEILWLAKLLPDHKPKEL---NDTERDALADACLSVARLSY----ATRG 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + VH G++ F+ V+G+TG+PC CG I + + R F+C CQ Sbjct: 216 TMDENVH-HGALFRFK----VFGRTGQPC-ERCGDPIMKTSVSSRPFFWCPVCQ 263 >gi|254482665|ref|ZP_05095903.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214037024|gb|EEB77693.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 111 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 9/119 (7%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAID 230 ++QKIV G+GNIY EAL+ LS IR R+ G + Y +L +++ VL AI+ Sbjct: 1 MDQKIVVGVGNIYANEALF---LSGIRPNRAA----GRISEARYQRLADQVKLVLTSAIN 53 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD+V DG GYF VYG+ GEPC +C + ++ + R+T YC CQ+ Sbjct: 54 HGGTTLRDFVGGDGKPGYFAQQLYVYGRGGEPC-KHCSEKLQESRISQRTTVYCVACQR 111 >gi|302555694|ref|ZP_07308036.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302473312|gb|EFL36405.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 287 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/304 (25%), Positives = 119/304 (39%), Gaps = 49/304 (16%) Query: 1 MPELPEVEIIRRNLM------MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE ++ L +++ + V L FD P +A G ++ V Sbjct: 1 MPELPEVEALKDFLTEHLVGHQIVRVLPVAISVLKT----FDPPL---SAVEGHEVAAVR 53 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQ------HNHVTISLTN 105 R K+L I ++ HL +G + +P K P LT Sbjct: 54 RYGKFLDIATADGPHLVTHLARAGWLQWKDRLPDGPPRPGKGPLALRAALETGAGFDLTE 113 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K+ V + DP+ + P + LGP+P + F+ L + Sbjct: 114 AGTQKRLAVYVVEDPQ--------------EVPGVARLGPDPLADDFDERRLAELLAGER 159 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 LK AL +Q ++AG+GN Y E L AK+SP + SL +L ++ Sbjct: 160 RQLKGALRDQSLIAGVGNAYSDEILHAAKMSPFKLAASLSAAE------TGRLYAALRDT 213 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L DA++ + + G V+G+ GEPC CG IR + + S YC Sbjct: 214 LTDAVERSRGVAAGRLKAEKKSG-----LRVHGRAGEPC-PVCGDTIREVSFSDSSLQYC 267 Query: 285 TYCQ 288 CQ Sbjct: 268 PTCQ 271 >gi|325526895|gb|EGD04368.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 171 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 11/180 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P + R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + + P+ +H+H+ + ++ + + DPRRFG Sbjct: 61 IDAGW-FIVHLGMTGTLRVL-PAAGVPVAA-KHDHI------DWIFDEFVLRFRDPRRFG 111 Query: 124 --FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 E + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 112 AVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRTVSVKQALLAGDIVVGVG 171 >gi|317508930|ref|ZP_07966566.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252771|gb|EFV12205.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 30/292 (10%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L V + D+C L+ P G+K+ V R K Sbjct: 1 MPELPEVQALANFLADRAVGTAVRGVDVCAF-SVLKTAAPPISELV--GQKVEQVGRAGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+I G L +++HL +G + +P K P + + + + + + Sbjct: 58 HLIIRC-GELRLVIHLSRAGWLRWIRETPERPPK-PGRGPLALRVRCGGERESFELTEAG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V + P + LGP+ D + L + +KN L++Q ++A Sbjct: 116 TQKRLAVWVVRD--EADVPSVAKLGPDALD--LDEAGLAGILAGTTARIKNVLVDQHLIA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL--YKLIQEIQKVLIDAIDAGGSSL 236 GIGN Y E L+ AK+SP +P D +L ++ VL++A++ Sbjct: 172 GIGNAYSDEILFAAKISPF-----------SPSDKTDPGQLFPALRGVLLEAVERAVGQE 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC S CG ++R + A RS YC CQ Sbjct: 221 AALLKAEKREG-----MRVHGRTGEPC-SACGDVVREVSFADRSWQYCATCQ 266 >gi|317123306|ref|YP_004097418.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315587394|gb|ADU46691.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 286 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 50/304 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L + VT + L + F+ P + G I V R K Sbjct: 1 MPELPEVQALVDFLAERTAGLAVTKVELASISALKTFNPPPQ---SLEGAPIDGVHRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNN-----TNTK 110 +L I+ +G ++ HL +G T+ +P K+P V +S + TK Sbjct: 58 FLDIDCDGT-HLVFHLARAGWLRWSDQLPTTVLRPGKSPIALRVRLSDGSGFDLTEAGTK 116 Query: 111 KYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K Y DP+ + P + LGP+P + F + + +K Sbjct: 117 KSLAAYIVRDPK--------------EVPGVARLGPDPLADDFTLERFRELLTGRRTQIK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L +Q+++AG+GN Y E L AK+SP SL P D++ +L +++ L A Sbjct: 163 GLLRDQEVIAGVGNAYSDEILHVAKVSPFAIAGSL------PPDVVDRLYAALRETLSSA 216 Query: 229 IDAG----GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + A L+D + V+ +TG+ C CG ++R + A S YC Sbjct: 217 VHAASGKPAKELKDAK---------RAGMRVHARTGQAC-PECGDVVREVSFADTSLQYC 266 Query: 285 TYCQ 288 CQ Sbjct: 267 ATCQ 270 >gi|182434517|ref|YP_001822236.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463033|dbj|BAG17553.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L +V K + + L L+ +D P +A G + V+R Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARV-LPLAISVLKTYDPPL---SALEGTTVTSVARHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L IE G L + HL +G + + A P + P + + L + + + Sbjct: 57 KFLDIE-AGGLHLCTHLARAGWLRWKDSFPAAPPR-PGKGPLALRLIT-VDGDGFDLTEM 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+ + LV P + LGP+P ++F+ + +K AL +Q ++ Sbjct: 114 GTRKRLSVHLVHDP--ADVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AK+SP ++T L +++ T +L ++ L DA+ Sbjct: 172 AGIGNAYSDEILHVAKMSPFKRTADLDEDDVT------RLYTALRSTLQDAVTRSSGVEA 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG I + + S YC CQ Sbjct: 226 GKLKAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|41407426|ref|NP_960262.1| hypothetical protein MAP1328c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395778|gb|AAS03645.1| hypothetical protein MAP_1328c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 262 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 42/295 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN----TNTKKYRVI 115 L++ +G ++++H GM+G CA +H + +SL T+ +K R + Sbjct: 61 LVLPTDGP-TLLIHSGMTGRPYY----CADGAAEDRHQRLVVSLDQGELRYTDLRKLRGV 115 Query: 116 Y--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + +DP DLV + + Q P LG ++ A + LK+AL++ Sbjct: 116 WLADDP-----DDLVPITGR-QGPDALGLGLRDFRDALTA------RSARRRQLKSALMD 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 164 QSVLAGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG- 216 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A +P CG + GR+T +C CQ Sbjct: 217 -------RVPGLPRWLTGARDAP----DPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|326775044|ref|ZP_08234309.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326655377|gb|EGE40223.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNL--MMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L +V K + + L L+ +D P +A G + V+R Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARV-LPLAISVLKTYDPPL---SALEGTTVTSVARHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L IE G L + HL +G + + A P + P + + L + + + Sbjct: 57 KFLDIE-AGGLHLCTHLARAGWLRWKDSFPAAPPR-PGKGPLALRLIT-VDGDGFDLTEM 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+ + LV P + LGP+P ++F+ + +K AL +Q ++ Sbjct: 114 GTRKRLSVHLVHDP--ADVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AK+SP ++T L +++ T +L ++ L DA+ Sbjct: 172 AGIGNAYSDEILHVAKMSPFKRTADLDEDDVT------RLYTALRSTLQDAVTRSSGVEA 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG I + + S YC CQ Sbjct: 226 GKLKAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|254819353|ref|ZP_05224354.1| hypothetical protein MintA_05478 [Mycobacterium intracellulare ATCC 13950] Length = 287 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 121/305 (39%), Gaps = 51/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E + +L +TV DI FD P +A G+ ++ R K Sbjct: 1 MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPP---ISALHGQTVVGADRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL + + +L ++ HL +G A P++ P + + RV Sbjct: 58 YLGLRTD-DLYLVAHLSRAGWLRWSDKLAAAPLR-PGKGPIAL-----------RVHLGT 104 Query: 119 PRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 P DL E + Q P + +LGP+ D L + Sbjct: 105 PGEAPGFDLTEAGTQKRVAVWLVSDPQQIPQIASLGPDALD--LGPDDLARVLAGNTGRI 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K + +QK++AGIGN Y E L AK+SP L + L L + VL D Sbjct: 163 KTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSEKQ------LAALHDAMITVLTD 216 Query: 228 AID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 A+ G ++L+ G ++ V+ +TG PC CG +R + A +S Y Sbjct: 217 AVSRSVGQGAATLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQY 266 Query: 284 CTYCQ 288 C CQ Sbjct: 267 CPTCQ 271 >gi|254383482|ref|ZP_04998833.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] gi|194342378|gb|EDX23344.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] Length = 286 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 40/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + V + ++ + +A G+ +R K+L Sbjct: 1 MPELPEVEALREFLDEHLTGRVVERVHPLAVSVLKTYEPPLTA-LEGQPAGTTARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTIS------LTNNTNTKK 111 + + G L ++ HL +G + + +P K P + + LT K+ Sbjct: 60 ALRI-GELHLVTHLARAGWLRWQDSFPEQPPRPGKGPLALRLVLEGGGGFDLTEAGTQKR 118 Query: 112 YRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V + DP+ + P + LGP+P ++F+ + +K Sbjct: 119 LAVYVVRDPQ--------------EVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGV 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L +Q ++AGIGN Y E L RAK+SP + S + T L +Q L +A+ Sbjct: 165 LRDQGVIAGIGNAYSDEILHRAKVSPFKLAASFDEEQVT------HLYGAVQDTLREAV- 217 Query: 231 AGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R + G + ++A V+G+ GEPC CG +R + A S YC CQ Sbjct: 218 -----ARSHGVAAGRLKAEKKSAMRVHGREGEPC-PVCGDTVRSVSFADSSLQYCPTCQ 270 >gi|153003378|ref|YP_001377703.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026951|gb|ABS24719.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 43/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP++E+ + ++ + + L LR P AA GK++ DV R K Sbjct: 1 MPELPDIEVYVEAIAARVRARPLLRVRLGSPFVLRSVDPPLGEAA--GKRVEDVRRVGKR 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKP----IKNPQHNHVTISLTNNTNTKKYRVI 115 +++ LEG+L + +HL ++G P + T+ LT TK+ I Sbjct: 59 IVLALEGDLFLALHLMIAGRLHWREAGAKLPGRVGLAALDFEDGTLVLTE-AGTKRRAAI 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + LV + L G EP D A ++N LK AL + Sbjct: 118 H----------LVRGAAALAA--LDRGGIEPLDADLAAFRAA--LTRENHTLKRALTDPS 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID----- 230 +++GIGN Y E L RA+LSP++ T L L +L + VL + D Sbjct: 164 LLSGIGNAYSDEILHRARLSPVKLTSRLTDEE------LARLHAATRAVLTEWTDRLRRE 217 Query: 231 -AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 218 AAGG--------FPEGVTAFREEMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|183984529|ref|YP_001852820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177855|gb|ACC42965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 287 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 121/307 (39%), Gaps = 55/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E + +L T+ D+ FD P + A G+ + R K Sbjct: 1 MPELPEIEALVDHLRRHAVGTTIGRVDVAALSVLKTFDPPIN---ALHGQTVTGAGRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS---------LTNN 106 YL ++ G L +I HL +G A P+ K P V + LT Sbjct: 58 YLGVQ-AGPLWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGVAPGFDLTEA 116 Query: 107 TNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K+ V + DPR Q P + TLGP+ + L Sbjct: 117 GTQKRLAVWLVEDPR--------------QVPGIATLGPDALE--LGPEELAGVLGPHTG 160 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +QK++AGIGN Y E L AK+SP L + L L + VL Sbjct: 161 RIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVL 214 Query: 226 IDAID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 DA+ G ++L+ G ++ V+ +TG PC CG +R + A +S Sbjct: 215 TDAVSRSVGQGAATLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSF 264 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 265 QYCATCQ 271 >gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 277 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 45/305 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDFPH-HFSAATRGKKIIDVSR 55 MPELPEVE RR + + ++ + HR + D F A G+KI R Sbjct: 1 MPELPEVEKARRLVHDLAIGSPISRV--HRPIIDDKVFVDVASGQFERALSGRKITHSKR 58 Query: 56 RAKYLLIELEGNLSII--VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K L +L+GN +++ H GM+G+F+ A+ I Q+ + S T + + + Sbjct: 59 HGKQLWWQLDGNDALVPCFHFGMTGAFV------ARGIDGIQYYNSKASGTGDWPPRFAK 112 Query: 114 VI----------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 ++ + DPRRFG + LV + + LGP+P N + ++ Sbjct: 113 LVVAFENGVELAFVDPRRFGKIKLVADVAEV----IGQLGPDPLLEMPNEEAFAALWRRR 168 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++ +K A+++QK++AGIGN E L+RA++ P + L + T + + + E+ K Sbjct: 169 SAPIKTAIMDQKVIAGIGNWMADEILYRARVHPETRANEL---SSTQLEAIRFRVTEVVK 225 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V +A +S D D + +GKTG ++ G I+ I GR+T + Sbjct: 226 VACEA-----NSDHDLFPDDWLFHH------RWGKTGGAKVN--GDAIKFIEVGGRTTAF 272 Query: 284 CTYCQ 288 Q Sbjct: 273 VPKLQ 277 >gi|108801300|ref|YP_641497.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119870451|ref|YP_940403.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126437281|ref|YP_001072972.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|108771719|gb|ABG10441.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119696540|gb|ABL93613.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126237081|gb|ABO00482.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 287 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 124/302 (41%), Gaps = 45/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L + + D+ FD P A G+++ D R K Sbjct: 1 MPELPEVEALADHLRRHAVGLPIGRVDVSAFSVLKTFDPP---ITALHGREVTDAHRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL ++ G+L +I HL +G A P+K P + + RV Sbjct: 58 YLGLQ-AGDLYLITHLSRAGWLRWSDKLAAAPLK-PGKGPIAL-----------RVHLGT 104 Query: 119 PRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 P DL E + + P + LGP+ + A L K++ + Sbjct: 105 PGAAPGFDLTEAGTQKRLAVWLVSDPSAVPGIAALGPDALE--LTADELGVLLSKQSGRI 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K + +QK++AGIGN Y E L A+LSP L TP+ + L + VL D Sbjct: 163 KTVITDQKVLAGIGNAYSDEILHVAQLSPFATANKL-----TPEQV-ATLHDAMLSVLTD 216 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ R ++ G ++ V+ +TG PC CG +R + A +S YC Sbjct: 217 AVS------RSVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPT 269 Query: 287 CQ 288 CQ Sbjct: 270 CQ 271 >gi|294815478|ref|ZP_06774121.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443828|ref|ZP_08218562.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] gi|294328077|gb|EFG09720.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 47/297 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + R + + + L R LR P + +A G+++++V R K+LL Sbjct: 1 MPEGDTVWRTAKRLDTALAGRE--LTRSELRV--PRYATADLTGRRVLEVVPRGKHLLAR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG L++ HL M G++ + + +P P+H + T++ YR+ Sbjct: 57 FEGGLTLHSHLRMDGAWRV-FPAGERPRGGPEHQIRAVLGTSSHTAVGYRLP-------- 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAGIGN 182 ++L+ T+ + + + LGP+ ++ + S L ALL+Q+ +AGIGN Sbjct: 108 VLELLRTTDEQKV--VGHLGPDLLGPDWDPAAARERLLADPSRPLGEALLDQRNLAGIGN 165 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI---DAID----AGGSS 235 +Y CE + A ++P L P+ +L +L+ ++L DA++ A GS Sbjct: 166 VYKCELAFLAGVTPWLPVGEL------PEGVLERLLATAHRLLEENRDAVERRTTAAGSR 219 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR--IVQAG--RSTFYCTYCQ 288 +H V+G+ G PC CG +RR +AG R +++C CQ Sbjct: 220 AGSRLH-------------VHGRAGRPC-PRCGTPVRRSGPGRAGDERISYWCPGCQ 262 >gi|291008458|ref|ZP_06566431.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 284 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 40/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + ++L +V + + ++ +S G+ + +R KYL Sbjct: 1 MPELPEVEALAQHLRDNATGRSVARVDIASLSVLKTVSPPWSE-LHGRTVTGATRYGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNP------QHNHVTISLTNNTNTKK 111 ++ EG L ++ HL +G + + KP + P V LT KK Sbjct: 60 DLDCEG-LHLVFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGGGVGFDLTEAGTQKK 118 Query: 112 YRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + DP + P + LGP+ S + LT + +K Sbjct: 119 LSAWVVEDP--------------AEVPGIAKLGPDAL--SLDVEGLTAVLSGRTERIKTV 162 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L +Q ++AGIGN Y E L AKLSP L D + +L ++++L DA++ Sbjct: 163 LTDQSMIAGIGNAYSDEILHAAKLSPYATAGRL------DADAVERLHATMREILTDAVE 216 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S +D + ++ V+G+TG PC CG +R + A RS YC CQ Sbjct: 217 R--SLKQDAARLKAE---KRSGMRVHGRTGLPC-PVCGDKVREVSFADRSLQYCATCQ 268 >gi|302539955|ref|ZP_07292297.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457573|gb|EFL20666.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 262 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 36/291 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + + LR G++ R K+ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRIERVEVADPAVLRGVTAQRLKRELEGRRFAAPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH-NHVTISLTNNTNTKKYRVIYND 118 L I G ++I+H GM+G + C P+ V ++L + +++ Y+D Sbjct: 61 L-IAPAGGPTLILHFGMTGGLV-----CRSEGDPPERFGRVVLTLDDG-----HQLRYHD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+ + L T R LG + D S L + +K L +Q +V Sbjct: 110 QRKLRGLWLATTDADVD----RILGEQGPDALSLGRAELDSLLEGRRGRVKATLTDQSVV 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+ E LWRA++ P +T L D L +L ++ VL ++ A Sbjct: 166 AGLGNLLGDEILWRARVHPKSRTSDLG------PDELRRLHTALRGVLSTSVRA------ 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + + + + +P CG+ +RR AGR++ +C CQ Sbjct: 214 ------GQVPPRASWLTGHRDDPDPHCPRCGRPLRRGKIAGRTSTWCPRCQ 258 >gi|320007052|gb|ADW01902.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 286 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L +V K + + L L+ +D P G + V+R Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARV-LPLAISVLKTYDPP---VTELEGADVSAVARHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTNNTN 108 K+L I G+L +++HL +G + + +P K P ++ LT Sbjct: 57 KFLDIT-AGDLHLLIHLARAGWLQWKDGFPATPPRPGKGPLALRTVLTGGDGFDLTEMGT 115 Query: 109 TKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 TK+ V + DP + P + LGP+P +SF+ + Sbjct: 116 TKRLAVHLVRDP--------------AEVPGVARLGPDPLADSFDRDAFAAVLGGARRQI 161 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K AL +Q ++AGIGN Y E L AK+SP + T +L + T +L ++ L D Sbjct: 162 KGALRDQSLIAGIGNAYSDEILHVAKMSPFKLTSALGDEDVT------RLYDAMRTTLQD 215 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ R G + +++ V+G+TG+PC CG + + + S YC Sbjct: 216 AVE------RSRGVAAGRLKAEKKSSMRVHGRTGQPC-PVCGDTVLEVSFSDSSLQYCPT 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|119714424|ref|YP_921389.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|119535085|gb|ABL79702.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] Length = 288 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 52/306 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L + + I + + FD P +A G + DV+R K Sbjct: 1 MPELPEVEALALDLRGRLDGHAIAKIHVAAFSALKTFDPP---LSALEGTLVDDVTRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L IE G L +++HL +G P K + +T R++ +D Sbjct: 58 FLDIEASG-LHLVLHLARAGWVRWRDEVPTIPPK-----------PSTKSTLAVRIVLDD 105 Query: 119 PRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SN 166 +D+ E + + P + +LGP+P + F L ++ Sbjct: 106 Q---SGLDVTEAGTRKSLAMYVVRDPHDVPGIASLGPDPLTDEFTIDRLREILEREGRKQ 162 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK L +Q +AGIGN Y E L A++SP + +L D L L ++ L Sbjct: 163 LKGVLRHQGTIAGIGNAYSDEILHAARMSPFKAAGTLTD------DELQVLYDALRGTLG 216 Query: 227 DAI----DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 DA+ S L+ G ++ +V+G+ G+ C CG +R + A S Sbjct: 217 DAVGRSRGLAASELK---------GEKKSHLAVHGRAGQAC-PVCGDTVREVSFADSSLQ 266 Query: 283 YCTYCQ 288 YC CQ Sbjct: 267 YCPTCQ 272 >gi|312193990|ref|YP_004014051.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311225326|gb|ADP78181.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 292 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 62/313 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS---AATRGKKIIDVSRRA 57 MPELPE+E L V+++ V + + + + S A G ++D +R Sbjct: 1 MPELPEMEA----LASVLRDRAVGKVVTRAEPVAINALRTVSPGPADLVGATLVDATRHG 56 Query: 58 KYLLIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+L + G L ++ HL +G + + T +R Sbjct: 57 KFLDLVFAGTGGERLDLVAHLSRAGWL------------RWKDSQPTTPGRGGRGGLAWR 104 Query: 114 VIYNDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNA-IYLTHQFH 161 ++++D F DL E + + P + LG +P D +F Sbjct: 105 LVFDDGSGF---DLTEAGTQKRLAVYLVRDPAEVPGVARLGIDPLDPAFTVEALAALLTA 161 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 S +K L +Q ++AG+GN Y E LW A+LSP + L + + + Sbjct: 162 AGRSQVKGVLTDQSVLAGVGNAYSDEVLWAARLSPFAPSSGLSGDQ----------VAAL 211 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYF------QNAFSVYGKTGEPCLSNCGQMIRRIV 275 + L+ +LR V G +G + +V+ +TGE C CG +R++ Sbjct: 212 HEALV-------GTLRAAVEAAGGLGAADLKAEKKANLAVHARTGEAC-PRCGDTVRQVS 263 Query: 276 QAGRSTFYCTYCQ 288 A RS YC CQ Sbjct: 264 FADRSLQYCPTCQ 276 >gi|108804620|ref|YP_644557.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108765863|gb|ABG04745.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 265 Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 31/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE+++ L ++ + + + + A G+ + V R K Sbjct: 1 MPELPDVEVLKGRLERTSLGRRISRVEVRDGRVVGEVSARGLREALEGRSLRRVHRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +EG +++H GM+G + H + + P H + + R+ + D Sbjct: 61 LFAGVEGGGWVLMHFGMAGG--LSHLPGTE--EEPPHVRLLLGFDGGD-----RLAFTDR 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + + + +R G P + + + +K+ L+NQ +VAG Sbjct: 112 RALGRVHPIRDPESF----VREKGLGPDALRVDYPSFRERLGGRRGAVKSVLMNQGVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+RA+L P L + + + +L + VL AID G D Sbjct: 168 LGNIYSDEVLFRARLHPRTGADRLGEED------IRRLFEATGGVLQTAIDRGA----DP 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GS + + G C G+ IRR+ AGR+ +YC CQ Sbjct: 218 EALPGSFLLPRR------REGARCPRGNGE-IRRLRIAGRTAYYCPACQ 259 >gi|225442888|ref|XP_002263635.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 403 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 125/302 (41%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + V K +T I K + P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 + ++L+ GM+G+ I+ + K + + T+ +K ++ Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTK------YKRSAVKDTDEWPSKYSKLFIEL 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L+E PP+ LGP+ KK +K Sbjct: 115 DDGLELSFTDKRRFAKVRLLEDPA--SVPPISELGPDALLEPMTIDEFIKSLSKKKIAIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AGIGN E L+ A++ P++ SL + + L Q I++V+ A Sbjct: 173 ALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRES------CETLHQCIKQVIEKA 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYC 287 ++ G S F + + + + +P + G+ I I GR+T Y Sbjct: 227 MEVGADS-----------SQFPSNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPEL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|317126732|ref|YP_004100844.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] gi|315590820|gb|ADU50117.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] Length = 289 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 42/270 (15%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+++ S R K+L ++ + +L++ VHLG+ G+F ++ P P + Sbjct: 36 AAVIDGRRLDQASARGKHLFLDFD-DLTLHVHLGLIGTFHVKPRDPLGPAGTP----ARL 90 Query: 102 SLTNNTNTKKYR-----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNA 153 L + R + ++P R L LGP+P D + Sbjct: 91 QLEGRRYVAELRGPMICALVDEPTRAAV--------------LAKLGPDPLHAPDVPSGS 136 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN------- 206 + + L++Q +VAG+GN+Y CE L+R ++ P + R L + Sbjct: 137 ERGWERISMSRKTIAELLMDQAVVAGVGNVYRCEVLFRHRIDPFTRGRDLGRRLWDDVWE 196 Query: 207 ---NGTPKDILYKLIQEIQKVLIDAID--AGGSSLRDYVHIDGS-IG-YFQNAFSVYGKT 259 P + + I +Q + A + A GSSL + G +G +F F Y +T Sbjct: 197 DLVTLLPLGMAFSQILTMQDQVAAAAEMVADGSSLAITETLSGERLGDHFDRRFHTYKRT 256 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GE C CG+ IR + GR+ ++C CQ+ Sbjct: 257 GEAC-DRCGRRIRAELIGGRTLYWCPGCQR 285 >gi|118619547|ref|YP_907879.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571657|gb|ABL06408.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 287 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 120/307 (39%), Gaps = 55/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+ + +L T+ D+ FD P + A G+ + R K Sbjct: 1 MPELPEIGALVDHLRRPAVGTTIGRVDVAALSVLKTFDSPIN---ALHGQTVTGAGRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS---------LTNN 106 YL ++ G L +I HL +G A P+ K P V + LT Sbjct: 58 YLGVQ-AGPLWLIAHLSRAGWLRWSDKLAAAPLPPGKGPIALRVHLGTLGVAPGFDLTEA 116 Query: 107 TNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K+ V + DPR Q P + TLGP+ + L Sbjct: 117 GTQKRLAVWLVEDPR--------------QVPGIATLGPDALE--LGPEELAGVLGPHTG 160 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +QK++AGIGN Y E L AK+SP L + L L + VL Sbjct: 161 RIKTVMTDQKVIAGIGNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVL 214 Query: 226 IDAID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 DA+ G ++L+ G ++ V+ +TG PC CG +R + A +S Sbjct: 215 TDAVSRSVGQGAATLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSF 264 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 265 QYCATCQ 271 >gi|41406987|ref|NP_959823.1| hypothetical protein MAP0889 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395338|gb|AAS03206.1| hypothetical protein MAP_0889 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 287 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 121/307 (39%), Gaps = 55/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E + +L + + D+ FD P +A G+ ++ R K Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPP---ISALHGQTVVGAERWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS---------LTNN 106 YL + EG L +I HL +G A P+ K P V + LT Sbjct: 58 YLGLRTEG-LFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGTPGAAPGFDLTEA 116 Query: 107 TNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K+ V + +DP R P + LGP+ D +A L Sbjct: 117 GTQKRLAVWLVDDPARV--------------PGIAALGPDALDLDVDA--LADLLAGNTG 160 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +QK++AGIGN Y E L AK+SP L L L + VL Sbjct: 161 RIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVL 214 Query: 226 IDAID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 DA+ G + L+ G ++ V+ +TG PC CG +R + A +S Sbjct: 215 TDAVSRSVGQGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSF 264 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 265 QYCPTCQ 271 >gi|323173228|gb|EFZ58857.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] gi|332997294|gb|EGK16910.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 157 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 82/168 (48%), Gaps = 15/168 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 RRFG + + L LGPEP + FN YL + KK L Sbjct: 109 RRFGAWLWTKELEGHNV--LAHLGPEPLSDDFNGEYLHQKCAKKKRRL 154 >gi|118464184|ref|YP_880320.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254773947|ref|ZP_05215463.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|118165471|gb|ABK66368.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 287 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 121/307 (39%), Gaps = 55/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E + +L + + D+ FD P +A G+ ++ R K Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPP---ISALHGQTVVGAERWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS---------LTNN 106 YL + EG L +I HL +G A P+ K P V + LT Sbjct: 58 YLGLRTEG-LFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGSPGAAPGFDLTEA 116 Query: 107 TNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K+ V + +DP R P + LGP+ D +A L Sbjct: 117 GTQKRLAVWLVDDPARV--------------PGIAALGPDALDLDVDA--LADLLAGNTG 160 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +QK++AGIGN Y E L AK+SP L L L + VL Sbjct: 161 RIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVL 214 Query: 226 IDAID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 DA+ G + L+ G ++ V+ +TG PC CG +R + A +S Sbjct: 215 TDAVSRSVGQGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSF 264 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 265 QYCPTCQ 271 >gi|290956988|ref|YP_003488170.1| DNA glycosylase [Streptomyces scabiei 87.22] gi|260646514|emb|CBG69611.1| putative DNA glycosylase [Streptomyces scabiei 87.22] Length = 284 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 128/293 (43%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + L R +LR P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGQM-----LSRSDLRV--PKYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + S + P H I T YR+ Sbjct: 54 LTRVEGGLTLHSHLRMDGSWKV-YASGERWRGGPTHQIRAILGTTERTAVGYRLP----- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ +++ + LGP+ ++ + L + L ALL+Q+ +AG Sbjct: 108 ---VLELMRTADEHRA--VGHLGPDLLGPDWDPELALANLLGDPGRALGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + +++P I P ++ +L +KVL + RD Sbjct: 163 IGNVYKSELCFLLRVTP------WIPVGALPAEVAARLPDLAKKVL--------EANRDR 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 I + G+ ++ VYG+ PCL C +R Q R T++C CQ Sbjct: 209 P-IRNTTGHRRHDLFVYGRAPRPCL-RCHTPVRAADQGDGSRERPTYWCPTCQ 259 >gi|310642365|ref|YP_003947123.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] gi|309247315|gb|ADO56882.1| DNA-(Apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] Length = 272 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVTVSREKSINTEVETFKKQLLGATVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + G + Q TI + + + K +Y Sbjct: 61 IFHL--------NTGKRLVLHLMLGGLLYLGTEEQRPDRTIQIELDFSGVK---LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + K L LGP+P D T + + LK L+NQ++ +GI Sbjct: 110 RLGYLHLL--TAKETDEALSDLGPDPLDRRMTLENFTARLKGRRGILKTTLVNQQVFSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A +P K ++++Q +P+ + KL Q VL +A GG + Sbjct: 168 GNCYSDEIAYIAGFTPGSKVQNIVQ---SPEKV-EKLYHATQSVLREATAEGGYMEMPLM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GE S G I R+ AG+ FYC Q Sbjct: 224 EGDTLTGGFDHQCRVYDREGEE--SPSGGKIVRVELAGKKAFYCPVQQ 269 >gi|255080114|ref|XP_002503637.1| predicted protein [Micromonas sp. RCC299] gi|226518904|gb|ACO64895.1| predicted protein [Micromonas sp. RCC299] Length = 292 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 29/251 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-------HHFSAATRGKKIIDV 53 MPELPEVE R + VT + + ++ FD F +A K + Sbjct: 1 MPELPEVESARCLVEAHCIGAKVTKVEFN-EDGSFDEKIFKDVERKAFVSALLNKTLTAA 59 Query: 54 SRRAKYLLIELEGNL-SIIVHLGMSGSFIIEHTSCAK------PIKN--PQHNHVTISLT 104 RR K++ ++ G S + H GM+G+F I K N P+ + ++ Sbjct: 60 HRRGKHMWWDMSGGADSPLFHFGMTGAFSIRGKGAMKYKAFVVDTSNWPPRFAKLVVTFD 119 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 N + Y DPRRFG + LV + PP+ LG +P + +F K+ Sbjct: 120 NGIA-----LAYTDPRRFGRIRLVRGDVTAS-PPISELGFDPLLAMPDEAAFASRFAKRG 173 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K+ LL+Q I AG+GN E L+ ++L P + +SL TP L L ++ V Sbjct: 174 GPIKSVLLDQTIAAGVGNWIADEVLYHSRLHPEQPAKSL-----TPAQ-LRDLRDAMEDV 227 Query: 225 LIDAIDAGGSS 235 + A DAG + Sbjct: 228 IKTACDAGADA 238 >gi|116622565|ref|YP_824721.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|116225727|gb|ABJ84436.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 291 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 121/289 (41%), Gaps = 34/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V + L + T+T + L L A G+++IDV R K + Sbjct: 1 MPELPDVVVYVEALCARIAGHTLTRVTLRGPFLLRTVTPPIDALY-GQRVIDVRRAGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I E L +++HL ++G + +P+ + ++ T++LT + ++ D Sbjct: 60 AIGFENGLWLVIHLMIAGR--LHWNGKRQPVAAFEFDNGTLTLTEAGTQHRAQIHVLDA- 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 T G E D + T +N LK +L + ++ +GI Sbjct: 117 -----------------APETAGLEVLDATLAE--FTAALRAENHTLKRSLTDPRLFSGI 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DAGGSSLRDY 239 GN Y E L RA+LSPI T L + T LY +E ++ + + + G + Sbjct: 158 GNAYSDEILHRARLSPIAMTFKLTEEEITR---LYGATREELELWVKRLREESGDKFPEK 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V F+ + +GK G PC CG I+RI A T YC CQ Sbjct: 215 VTA------FREEMAAHGKYGNPC-PRCGGKIQRIRYAANETNYCPACQ 256 >gi|332670040|ref|YP_004453048.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] gi|332339078|gb|AEE45661.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] Length = 296 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V+ + + + F A G ++DV+R K+L Sbjct: 1 MPELPEVEALAGFLRGRAVDHAVSGVEVGAISALKTF-RPPPDALVGAVVVDVTRHGKWL 59 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + L ++ HL +G +P++ P + + + + + + Sbjct: 60 DLMVATATGEPLHLVWHLSRAGWVRWTDQLSDRPVR-PGKSPIALRVRLDDGSGFDLTEA 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +R + E + P + TLG EP + F LT +N +K L +Q Sbjct: 119 GTRKRLAVHVVAEPT---DVPQVATLGVEPLSDEFTQDRLTELLAARNQQVKGLLRDQGT 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L A++SP TRS D L I++VL +A++A +S Sbjct: 176 IAGIGNAYSDEILHAARMSPFAPTRSF------DADRTATLYAAIRQVLTEAVEA--ASG 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS----NCGQMIRRIVQAGRSTFYCTYCQ 288 R + + + V+G+TGE C CG + + A S YC CQ Sbjct: 228 RPAAELKDA---KRRGMRVHGRTGEACPGWDGVPCGDTVHEVSFADSSLQYCPTCQ 280 >gi|308069320|ref|YP_003870925.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305858599|gb|ADM70387.1| Formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] Length = 272 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 121/290 (41%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVKVSREKSINTEVETFEKQLLGTTVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSG--SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 I HL G + Q T+ + + + K +Y Sbjct: 61 ----------IFHLNTGGRLVLHLMLGGLLFLGTEEQRPDRTVQIELDFSGVK---LYFI 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R G++ L+ + K L LGP+P D T + + LK L+NQ+I + Sbjct: 108 GLRLGYLHLL--TAKETEEALSDLGPDPLDRRMTLEKFTARLKGRRGILKTTLVNQQIFS 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E + A +P K ++++Q +P+ + KL Q VL +A GG Sbjct: 166 GIGNCYSDEIAYIAGFTPGSKVQNIVQ---SPEKV-EKLYHATQSVLREATAEGGYMEMP 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D G F + VY + GE S G I R+ AG+ FYC Q Sbjct: 222 LMEGDTLTGGFDHQCRVYDREGEE--SPSGGKIVRVELAGKKAFYCPVQQ 269 >gi|330470731|ref|YP_004408474.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] gi|328813702|gb|AEB47874.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] Length = 286 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 79/300 (26%), Positives = 115/300 (38%), Gaps = 42/300 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + + +A T G+ + D R K+L Sbjct: 1 MPELPEVEALAGYLRQRAVGRRVERLEAVAISALKTYDPALTAVT-GRSVTDARRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSF----IIEHTSCAKPIKNP------QHNHVTISLTNNTNTK 110 + +G+L ++VHL +G T +P K P + LT K Sbjct: 60 DVVFDGDLHLVVHLARAGWLHYREAFASTVPLRPGKGPIALRARLDDGSGFDLTEAGTQK 119 Query: 111 KYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 K V + DP+ P + LGP+ A + LK Sbjct: 120 KLAVYLVTDPQ--------------AVPGVAKLGPDALSADLAA--FAGALRSRRGQLKG 163 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L +Q ++AG+GN Y E L AKLSP T L D + L ++VL DA+ Sbjct: 164 VLTDQAVLAGVGNAYSDEILHAAKLSPFALTDRLTD------DQMATLHAATRRVLGDAV 217 Query: 230 DAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R + G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 218 ------TRSLGQRAAELKGEKRSGLKVHARTGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|254775599|ref|ZP_05217115.1| hypothetical protein MaviaA2_13153 [Mycobacterium avium subsp. avium ATCC 25291] Length = 262 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 42/295 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN----TNTKKYRVI 115 L++ +G ++++H GM+G CA +H + +SL T+ +K R + Sbjct: 61 LVLPTDGP-TLLIHSGMTGRPYY----CADGAAEDRHQRLVVSLDQGELRYTDLRKLRGV 115 Query: 116 Y--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + +DP DLV + + Q P LG ++ A + LK+AL++ Sbjct: 116 WLADDP-----DDLVPITGR-QGPDALGLGLLDFRDALTA------RSARRRQLKSALMD 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 164 QSVLAGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG- 216 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A P CG + GR+T +C CQ Sbjct: 217 -------RVPGLPRWLTGARDAP----NPHCPRCGARLDHARVGGRTTLWCPRCQ 260 >gi|238061799|ref|ZP_04606508.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237883610|gb|EEP72438.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 286 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 54/306 (17%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V + + ++ +D AA G+ + D R K Sbjct: 1 MPELPEVEALAGYLRERAVSRRVDRVEVAAISALKTYD---PAPAAVSGRAVTDARRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +L + +G+L ++VHL +G E A P++ P + + RV + Sbjct: 58 FLDVVFDGDLHLVVHLARAGWLHYRESFPSAAPLR-PGKGPIAL-----------RVRLD 105 Query: 118 DPRRFGFMDLVETSLKYQY-----------PPLRTLGPE--PAD-NSFNAIYLTHQFHKK 163 D F DL E + + P + LGP+ AD +F A + + Sbjct: 106 DGSGF---DLTEAGTQKKLAAYLVADPATVPGVAKLGPDVLAADLPTFAA-----RIRSR 157 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K L++Q ++AG+GN Y E L A+LSP T L D + L + ++ Sbjct: 158 RGQVKGVLMDQAVLAGVGNAYSDEILHAARLSPFALTDRLTD------DQVAALHESTRR 211 Query: 224 VLIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 VL DA+ R H + G ++ +V+ + G PC CG +R + A S Sbjct: 212 VLGDALS------RSLGHRAAELKGEKRSGLAVHARAGLPC-PTCGDTVREVSFADSSLQ 264 Query: 283 YCTYCQ 288 YC CQ Sbjct: 265 YCPTCQ 270 >gi|307328128|ref|ZP_07607308.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] gi|306886247|gb|EFN17253.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] Length = 262 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 44/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR------GKKIIDVS 54 MPELP+VE RR L + V + + + H A R G++ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRVERVEVADAGV-----LHGVTAQRLKRDLEGRRFAAPR 55 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R K+L+ +G +++VH GM+G S +P + V L + +R+ Sbjct: 56 RHGKWLIAPTDGP-TVVVHFGMTGRLACGAES--EPAG--RFERVAFDLDDG-----HRL 105 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLN 173 Y D R+ + L T R LG + D S + L + +K L + Sbjct: 106 GYEDQRKLQGIWLAATEADVD----RILGDQGPDALSLSRADLDRLLAGRRGRVKATLTD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN+ E LWRA++ P R +L + + L+ ++E+ + + A Sbjct: 162 QAVIAGLGNLLGDEILWRARIHPQRPANALTDDE---HERLHTAMREVLRASVRA----- 213 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G + + + +P CG +RR AGR++ +C +CQ+ Sbjct: 214 ----------GRVPDDPDWLTGQRDDPDPHCPRCGHPLRRGRIAGRTSLWCPHCQR 259 >gi|282862271|ref|ZP_06271333.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282562610|gb|EFB68150.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 275 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 27/268 (10%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R +LR P +A G+ ++DV+ R K+LL +E L++ HL M GS+ + + Sbjct: 23 LTRSDLRV--PRFATADLSGRTVLDVTARGKHLLTRVEDGLTLHSHLRMDGSWRL-YAPG 79 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P H + T YR ++L+ T + Q + LGP+ Sbjct: 80 ERWRGGPAHQIRAVLETAERTAVGYR--------LPVLELIRTRDEDQV--VGHLGPDLL 129 Query: 148 DNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ L ALL+Q+ +AGIGN+Y CE + A+ +P L Sbjct: 130 GPDWDPDTAERNLRSAPGRPLGEALLDQRNLAGIGNVYKCELCFMARATPWLPVGEL--- 186 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG------SIGYFQNAFSVYGKTG 260 P + +L++ +++L D + V + F+ VYG+ Sbjct: 187 ---PPATMTRLVRTAKQLLEANRDNPSRTTTAPVAVSARPDRMREARRFRERLFVYGRAD 243 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PCL C IRR+ R T++C CQ Sbjct: 244 RPCL-RCATPIRRVELDNRPTYWCPGCQ 270 >gi|323357079|ref|YP_004223475.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273450|dbj|BAJ73595.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 287 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 124/303 (40%), Gaps = 47/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE + L + + V+ + N + +A G + V R K++ Sbjct: 1 MPEMPEVEGLVEFLRGRVTGLQVSKATVSAINALKTYDPPLTALV-GSAVTAVDRHGKFV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +I HL +G ++ + + I P + + RV ++D Sbjct: 60 DVSTDAGVHLIFHLAKAG-WLRWYDALPSTIIKPGKTPIAL-----------RVGFDDGS 107 Query: 121 RFGFMDLVETSLKY-----------QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 F DL E K + P + LGP+P F+ + + +K Sbjct: 108 GF---DLTEAGTKKSLAVYAVRSPDEVPGIARLGPDPLSEGFDRATFGALLTGRRTQIKG 164 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L +Q I+AG+GN Y E L AK+SP +L D + +L + + + L +AI Sbjct: 165 VLRDQSIIAGVGNAYSDEILHAAKMSPYALAATLTD------DEVDRLFRAMVETLTEAI 218 Query: 230 D-AGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 D A G + L+D + V+G+ GE C CG +R + A S YC Sbjct: 219 DEARGKPPAELKDAK---------RRGMRVHGRRGEAC-PVCGDEVRSVYFADNSLEYCP 268 Query: 286 YCQ 288 CQ Sbjct: 269 TCQ 271 >gi|324997986|ref|ZP_08119098.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia sp. P1] Length = 286 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 43/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------PHHFSAATRGKKIIDVS 54 MPELPEVE R ++ T+TD+ + R D+ P ++A +G ++ Sbjct: 19 MPELPEVENAR-AVLAQATGRTITDV-----DDRDDWVCRPHRPGDIASALKGGRLTAAH 72 Query: 55 RRAKYLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 R K + + E ++ VHLGM G ++ ++ + P Sbjct: 73 RIGKTMWCDTETSDGDAGPALGVHLGMGGRIVVTNSGGERIGGGPARPD---RQARKREW 129 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ V ++D +F D P L LGP+ A+ A++ + + S +K Sbjct: 130 DRFTVTFDDGGQFRLFDKRRLGRVRLDPDLSGLGPD-AEGLRPAVF-RERLLRGRSAVKA 187 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++AG+GN+ E LW+A+++P R L + + L +L + + + L AI Sbjct: 188 RLLDQSVLAGVGNLLADETLWQARIAPATPVRDLTRTD------LDRLHRNLDRALERAI 241 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG VH I + G C CG + GRST++C Q Sbjct: 242 ANGG------VHTGEVIEHRH--------PGGHC-PRCGAEMVHGTVGGRSTWWCPQEQ 285 >gi|331694040|ref|YP_004330279.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326948729|gb|AEA22426.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 291 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 82/310 (26%), Positives = 129/310 (41%), Gaps = 57/310 (18%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + ++L V + + D+ F+ P ++A G+ + SR K Sbjct: 1 MPELPEVEALAQHLRDHAVYRPVARVDVASMSVLKTFEPP---ASALVGRVVTGASRYGK 57 Query: 59 YLLIELEG----NLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNN----- 106 +L +E L++I HL +G T+ A KP + P V + Sbjct: 58 FLSVEFHDRPGDELALITHLSRAGWLRWHATASATPPKPGRGPLALRVHLDTVGGPGFDL 117 Query: 107 --TNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 T+K +Y +DP+ + P + LGP+ S + L Sbjct: 118 TEAGTQKRLAVYLVHDPQ--------------EVPGIAKLGPDALALSRDE--LAELLAG 161 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K +++QK +AGIGN Y E L A+LSP + L L L + ++ Sbjct: 162 HTERIKTLIVDQKTIAGIGNAYSDEILHTARLSPYAVSGRLRPEQ------LDALYEAMR 215 Query: 223 KVLIDAID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 VL DA++ G + L+ G ++ V+ +TG PC CG +R + A Sbjct: 216 TVLTDAVERSVGQGAAELK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFAE 265 Query: 279 RSTFYCTYCQ 288 RS YC CQ Sbjct: 266 RSFQYCPGCQ 275 >gi|297191673|ref|ZP_06909071.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] gi|197721607|gb|EDY65515.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] Length = 274 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 123/292 (42%), Gaps = 34/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 8 MPEGDTVWLTAHRLHEALAGQVLT-----RSDLRV--PRFATADLTGRTVLDVTPRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HLGM GS+ + + A+ P H I + YR+ + Sbjct: 61 LTRFEGGLTLHSHLGMEGSWRV-FDAGARWSGGPSHQIRAILGSAARTAVGYRLPVVELL 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R E ++ + P L LGP+ A L L ALL+Q+ +AGI Sbjct: 120 RTAEE---EEAVGHLGPDL--LGPDWDPGRAVANLLADPLRP----LGEALLDQRNLAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A+++P L P I +L+ Q++L +A S Sbjct: 171 GNVYKSELAFLARVTPWLPVGEL------PPGIPERLVATAQRLL----EANKRSFDRRT 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ--AGRS--TFYCTYCQ 288 G VYG+ G PC CG +R+ Q AGR T++C CQ Sbjct: 221 MTSGR--NPSQKLYVYGRKGRPC-PRCGTPVRKADQGEAGRERPTYWCPRCQ 269 >gi|309810552|ref|ZP_07704370.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] gi|308435549|gb|EFP59363.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] Length = 287 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 120/303 (39%), Gaps = 47/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L + + + L + F A G + VSR K++ Sbjct: 1 MPELPEVSGLVGFLDERIVGRAIVGVELASIAVLKTFDPS-PQALAGLVVDAVSRHGKWI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E G LS++ HL +G T+ +P K+P I+L RV ++ Sbjct: 60 ALETSGGLSLVFHLSRAGWLRWSDALPTTVLRPGKSP------IAL---------RVRFD 104 Query: 118 DPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 D F DL E + P + LG +P F + Sbjct: 105 DGSGF---DLTEAGTQKRLAVHIVRDVVDVPGIAKLGIDPLSPEFTREAFGQLVASRRMQ 161 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K L +Q +AG+GN Y E L AKLSP T SL D LY + L Sbjct: 162 IKGLLRDQNEIAGVGNAYSDEVLHVAKLSPFALTSSLEPGQ---IDTLY---DALITTLT 215 Query: 227 DAID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A+D A G +D + V+G+TGE C CG +IR + A RS YC Sbjct: 216 NAVDAAAGKPAKDLKDAK------RAGMRVHGRTGEAC-PVCGDVIREVSFADRSLQYCA 268 Query: 286 YCQ 288 CQ Sbjct: 269 TCQ 271 >gi|307328100|ref|ZP_07607280.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306886219|gb|EFN17225.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 288 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/314 (25%), Positives = 123/314 (39%), Gaps = 68/314 (21%) Query: 1 MPELPEVEIIR---------RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 MPELPEVE + R + V+ + V+ + + L H +AA R K + Sbjct: 1 MPELPEVEALTAILAERAAGREIARVLP-VAVSVLKTYDPPLSVLEGHTITAAARHGKFL 59 Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 D++ +L +VHL +G P P+ ++L Sbjct: 60 DLATDGPHL----------VVHLAKAGWLRWRD---GLPEAPPRPGKGPLAL-------- 98 Query: 112 YRVIYNDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQF 160 R++ P R GF DL E + + P + LGP+P ++SF Sbjct: 99 -RLLLAGPERSGF-DLTEAGTRKGLAVYVVRDPQEVPGIARLGPDPLEDSFTLEAFAGLL 156 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +K L +Q ++AGIGN Y E L A++SP R L + +E Sbjct: 157 RGVRHRIKGVLRDQSVIAGIGNAYSDEILHAARMSPYRLASDLTE-------------EE 203 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSI------GYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 I V +A G++LR V + G + V+G+TG+PC CG +R + Sbjct: 204 IAGV----YEAMGATLRSAVERSHGLAATDLKGEKRGGMRVHGRTGQPC-PVCGDTVREV 258 Query: 275 VQAGRSTFYCTYCQ 288 S YC CQ Sbjct: 259 SFRDSSLQYCPTCQ 272 >gi|118468423|ref|YP_889782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118169710|gb|ABK70606.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 288 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/305 (27%), Positives = 123/305 (40%), Gaps = 50/305 (16%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L V + ++ D+ FD P AA G + R K Sbjct: 1 MPELPEVEALADHLRRHAVGRVVSRVDVSALSVLKTFDPP---VAALHGSTVTAAHRWGK 57 Query: 59 YLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----------SLTN 105 YL +E+E L +I HL +G P+K P + + LT Sbjct: 58 YLGMEVESGGAPLHLITHLSRAGWLRWSDKLAPTPLK-PGKGPIALRVHLGDSQGFDLTE 116 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K+ V + DP MD+ P + +LGP+ S ++ L + Sbjct: 117 AGTQKRLAVWVVRDP-----MDV---------PQIASLGPDAL--SLDSTALAGVLAGNS 160 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K + +QK++AGIGN Y E L AKLSP L L L + V Sbjct: 161 GRIKTVITDQKVMAGIGNAYSDEILHVAKLSPFTTAGKLTDAQ------LGALHDAMITV 214 Query: 225 LIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L DA+ R ++ G ++ V+ +TG PC CG +R + A +S Y Sbjct: 215 LTDAVS------RSVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQY 267 Query: 284 CTYCQ 288 C CQ Sbjct: 268 CPTCQ 272 >gi|258650476|ref|YP_003199632.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] gi|258553701|gb|ACV76643.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] Length = 294 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 81/311 (26%), Positives = 124/311 (39%), Gaps = 56/311 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV + L +T + + N+ +D P ++A G+ + R K Sbjct: 1 MPELPEVTALAAFLTEHAGGQRITAVSVAALNVLTTYDPP---ASALVGRTVTGAGRHGK 57 Query: 59 YL-LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-- 106 +L L+ G L +I+HL +G +P K + ++L+ Sbjct: 58 FLDLVTAPGPDASPGTPDALHLILHLARAGWLRWSDAISPRPPKMGGPIALRVALSGGGG 117 Query: 107 -----TNTKK--YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 TKK + DPR P + LGP+ D + L Sbjct: 118 FDVTEAGTKKSVTAAVVTDPR--------------AVPGVARLGPDALD--LDRAALAQV 161 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + +KN L +Q+++AG+GN Y E L A+LSP L +P D L +L Sbjct: 162 LATQTGRIKNVLTDQRVIAGVGNAYSDEILHTARLSPFATAAKL-----SP-DELDRLYD 215 Query: 220 EIQKVLIDAI--DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + VL DA+ GG + R G + V+ +TG PC CG ++ + A Sbjct: 216 ALATVLTDAVLRSVGGQAARLK-------GEKRTGLRVHARTGLPC-PVCGDVVAEVSFA 267 Query: 278 GRSTFYCTYCQ 288 RS YC CQ Sbjct: 268 DRSFQYCPTCQ 278 >gi|205374796|ref|ZP_03227589.1| endonuclease VIII [Bacillus coahuilensis m4-4] Length = 273 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 127/304 (41%), Gaps = 47/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ + +K T+ + + F FPH F RG I V + K Sbjct: 1 MPEGPEIRRAADQVEKAIKGRTIEE-------MYFAFPHLEEFEELFRGATCIRVDTKGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTNNTNTKKYRVIYN 117 +LI L+ +I H + G + ++ + N P+ N V +N KK ++Y+ Sbjct: 54 AMLIRLDNGYTIYSHNQLYGRWY------SRNVYNYPKTNRVLRMAIHNE--KKSALLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQ 174 +D++ +P ++ +GP+ A L +FH+K LL+Q Sbjct: 106 ASD----IDVLRNEEVENHPFIKKVGPDILSERVTAEELVERFHQKRFYRRMWSGLLLDQ 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTR--SLIQNNGTPKDILYKLIQEIQK-------VL 225 +AGIGN E L+ A++ P + SL Q + ++ ++Q + L Sbjct: 162 AFIAGIGNYLRSEILYMARIHPTLRPVDCSLSQLESLAESTIHLMVQSYKMGGITNNLEL 221 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 ++ + G Y H V+ + GE C CG+ I +++ A R +YC Sbjct: 222 VERLKKQGVKRSKYRHW------------VFNREGESCF-QCGREIEKMMAASRRAYYCP 268 Query: 286 YCQK 289 YCQ+ Sbjct: 269 YCQR 272 >gi|197117207|ref|YP_002137634.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197086567|gb|ACH37838.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 261 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 46/276 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLTIYAENLARKLTGKKIATVSFHDRGRLNVAPDELSAALIGAKVTAVRRTGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ T ++ P VT++ + + + +DP+ Sbjct: 61 SFQADNGAMLRVHLMLTGGFVLTSTEHLDRLEAPV---VTVTFNDGSA-----LAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT----HQFHKKNSN--LKNALLNQ 174 + + TL P+P + +A+ L+ Q K +K LL+Q Sbjct: 113 GWATL---------------TLNPQPEREAPDALELSADQLQQLCAKQPKALIKALLLDQ 157 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++ GIGN Y E LW A++SP L P + + L + I VL DAI S Sbjct: 158 ALIGGIGNAYADEILWEARISPKSVAGKL------PPEAVSALARAIPAVLKDAI----S 207 Query: 235 SLRDYVHIDGSIGYFQNAFSVY------GKTGEPCL 264 LR H D G ++ V+ TG P + Sbjct: 208 ELRKR-HPDMVAGEYREFLKVHRPGLKQSPTGAPVI 242 >gi|120405833|ref|YP_955662.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119958651|gb|ABM15656.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 297 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 124/302 (41%), Gaps = 35/302 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L +TV D+ FD P +A G+++ +R K Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVAALSVLKTFDPP---ISALYGQEVTGANRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL ++ G L +I HL +G A P+K P + + + + Sbjct: 58 YLGLQ-AGELHLITHLSRAGWLRWSDKLAAAPLK-PGKGPIALRVHLGPPGESPGPNVAA 115 Query: 119 PRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 GF DL E + + P + +LGP+ S L ++ + Sbjct: 116 GAAPGF-DLTEAGTQKRLAVWLVTDPMAVPQIASLGPDAL--SLTGQALAEVLGGQSGRI 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K + +QK++AGIGN Y E L AKLSP L TP L L + VL D Sbjct: 173 KTVITDQKVIAGIGNAYSDEILHVAKLSPFATANKL-----TPSQ-LVTLHDAMISVLTD 226 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ R ++ G ++ V+ +TG PC CG +R + A +S YC Sbjct: 227 AVT------RSVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPT 279 Query: 287 CQ 288 CQ Sbjct: 280 CQ 281 >gi|303272279|ref|XP_003055501.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463475|gb|EEH60753.1| predicted protein [Micromonas pusilla CCMP1545] Length = 330 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 21/222 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR------KNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE R + T+ + + K + F++A +G+ + Sbjct: 1 MPELPEVESARVLCEKHIVGATIVSVEFNEDGTYDEKIFKEIDESQFTSALKGRTVKAAR 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSF-------IIEHTSCAKPIKN--PQHNHVTISLTN 105 R K+L +L + + H GM+G+ I+++ + A N P+ + ++ +N Sbjct: 61 RLGKHLWWDLGTRSTPLFHFGMTGAMTIKGGGSIVKYKAFAVDTVNWPPRFAKLVVTFSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + Y DPRRFG + LV+ + + PPL LG +P + F K+ + Sbjct: 121 GVT-----LAYTDPRRFGRVRLVD-GVVTESPPLSDLGFDPLLAMPDEKTFASLFAKRAA 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +K LL+QK+ AG+GN E L+ A++ P + +SL Sbjct: 175 PVKAVLLDQKVAAGVGNWVADEVLFHARVHPEQPAKSLTHGQ 216 >gi|118466096|ref|YP_882333.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium avium 104] gi|118167383|gb|ABK68280.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Mycobacterium avium 104] Length = 262 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/295 (25%), Positives = 123/295 (41%), Gaps = 42/295 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN----TNTKKYRVI 115 L++ +G ++++H GM+G CA ++ + +SL T+ +K R + Sbjct: 61 LVLPTDGP-TLLIHSGMTGRPYY----CADGAAEDRYQRLVVSLDQGELRYTDLRKLRGV 115 Query: 116 Y--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + +DP DLV + + Q P LG ++ A + LK+AL+ Sbjct: 116 WLADDP-----DDLVPITGR-QGPDSLGLGLRDFRDALTA------RSARRRQLKSALME 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 164 QSVLAGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG- 216 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A +P CG + GR+T +C CQ Sbjct: 217 -------RVPGLPRWLTGARDAP----DPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|322434589|ref|YP_004216801.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] gi|321162316|gb|ADW68021.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] Length = 267 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 33/268 (12%) Query: 31 KNLRFDFPH-HFSAAT--RGKKIIDVSRRAKYL---LIELEGNLSII-VHLGMSGSFIIE 83 K +R D P F+ A G+ ++ V+ K+L ++EG I+ VH+G+ G F Sbjct: 21 KKVRVDSPQGRFTDAPLLDGRTLVKVTAVGKHLGYDFGKIEGEQRILHVHMGLYGDFSEG 80 Query: 84 HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG 143 H +P + + + T+ + R G D + + L LG Sbjct: 81 HPPMPEP-----RGALRLRIWTKTDWLELR---------GPTDCSLWNAEKWQTLLDRLG 126 Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P+P ++ L + + +++ L++Q I+AG+GNIY E L+RA+LSP + Sbjct: 127 PDPLNHDKPGPML-ERIATRKTDIGQLLMDQSILAGVGNIYRAELLFRARLSPFKP---- 181 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAI---DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 N P+ L + ++ K++ DA+ + +D H G + A VY +TG Sbjct: 182 --GNEVPQKTLEAIYKDAVKLMPDAMVDRRIVTTKAKDRPHKTGE-ALNEEAHYVYRRTG 238 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG I+ + A R+ F+C CQ Sbjct: 239 RPCFI-CGTAIKTKIVASRNLFWCPTCQ 265 >gi|145222442|ref|YP_001133120.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315442889|ref|YP_004075768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|145214928|gb|ABP44332.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315261192|gb|ADT97933.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 287 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 39/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F SA G+++ +R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVASLSVLKTFDPPVSALV-GREVTAANRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G+L +I HL +G A P+K P + + RV P Sbjct: 60 GLQ-AGDLHLITHLSRAGWLRWSDKLAAAPLK-PGKGPIAL-----------RVHLGTPG 106 Query: 121 RFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 DL E + + P + +LGP+ + A T ++ +K Sbjct: 107 EAPGYDLTEAGTQKRLAVWLVTDPLAVPQIASLGPDALSLTLPA--FTEMLSGESGRIKT 164 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 + +QK+++GIGN Y E L A+LSP L + D+ +I + + ++ Sbjct: 165 VITDQKVISGIGNAYSDEILHVARLSPFATANKLTEAQRA--DLYDAMITVLTDAVTRSV 222 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++L+ G ++ V+ +TG PC C +R + A +S YC CQ Sbjct: 223 GQQAATLK---------GEKRSGLRVHARTGLPC-PVCVDTVREVSFADKSFQYCATCQ 271 >gi|300788843|ref|YP_003769134.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299798357|gb|ADJ48732.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 257 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 36/256 (14%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIK 92 P + A RG ++ + RR K L E EG + +HLGM+G S P + Sbjct: 32 PGDIATALRGGRLTEAHRRGKTLWCETEGGDGRPGPNLGLHLGMAGQLRFAGES-GPPGR 90 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 + ++ + + D + D S P L LGP+ + S Sbjct: 91 IRDRD-------EKPEWFRFGITFADGEQLRLFDTRRLSRVRLDPDLDALGPDAGEISRR 143 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 + + + LK LL+Q +VAGIGN+ E LW+A LSP R + ++ Sbjct: 144 --DFAERVGRGRAPLKARLLDQSVVAGIGNLLADETLWQAALSPARPVHEMSSDD----- 196 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L + ++K L AI GG VH IG+ + GE C CG + Sbjct: 197 -LGHLHKALRKALRAAIRHGG------VHTGEIIGHR--------RAGEHC-PRCGAEMS 240 Query: 273 RIVQAGRSTFYCTYCQ 288 GRST++C+ Q Sbjct: 241 HGTVGGRSTWWCSKEQ 256 >gi|297155165|gb|ADI04877.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 288 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 121/304 (39%), Gaps = 48/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + + L + + H + +D P G+ + V R Sbjct: 1 MPELPEVEALAQILAERAVGREIARV--HPAAVSVLKTYDPP---LTDLEGRTVTAVRRH 55 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + +G +++HL +G P P+ ++L R+ Sbjct: 56 GKFLDLATDGP-HLVLHLARAGWLRWRD---GLPEDPPRPGKGPLAL---------RLRL 102 Query: 117 NDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 P GF DL E + + P + LGP+P SF Sbjct: 103 AGPEGAGF-DLTEAGTRKALSVYCVHDPQEVPGIARLGPDPLAESFTLEEFAGLLRGVRH 161 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K L +Q ++AGIGN Y E L A++SP R L + + +L + + L Sbjct: 162 RIKGVLRDQSVIAGIGNAYSDEILHAARMSPYRLAGDLTEEE------VARLYEAMGATL 215 Query: 226 IDAIDAG-GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 DA++ G + RD ++ V+G+TG+PC CG M+R + A S YC Sbjct: 216 RDAVERSLGPAARDLK------AEKRSGMRVHGRTGQPC-PVCGDMVREVSFADSSLQYC 268 Query: 285 TYCQ 288 CQ Sbjct: 269 PTCQ 272 >gi|270263766|ref|ZP_06192035.1| endonuclease VIII [Serratia odorifera 4Rx13] gi|270042650|gb|EFA15745.1| endonuclease VIII [Serratia odorifera 4Rx13] Length = 263 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L + + +T++ F FP H+ G++II + R K Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVG-------FAFPQLKHYRDRLIGERIIAIEPRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + AK ++P + + T + + Sbjct: 54 ALLTHFSNGLTMYSHNQLYGVWKV-----AKAGESPDTKR-DLRVRLETAQQAILLYSAS 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 G + +E Q+P L+ +GP+ D S + + + L LL+Q Sbjct: 108 EITLGPREEIE-----QHPFLQRIGPDVLDMSLTVTMVAQRLLSPAFRRRQLGGMLLDQG 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN E LW+A+L+P + P+D++ + +Q + + L+ A+ Sbjct: 163 VLAGLGNYLRAEILWQAELAPQHR----------PQDLMPETLQRLAQALL-AVPRLSYQ 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 212 TRGQVDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIVRTQLSSRPFYWCPGCQK 263 >gi|220912308|ref|YP_002487617.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] gi|219859186|gb|ACL39528.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] Length = 289 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 39/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ +T + + + F+A G+ + V R K++ Sbjct: 1 MPELPEVAGLATFLDGQLRGAVLTKLQVVSFAVLKTADPPFNA-IEGRTVAGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ EG +S++ HL +G + +P + L R ++ P Sbjct: 60 SIDTEG-MSLVFHLARAGWL--------RFTDSPADSQ----LKMGKGMIAVRCAFSGPD 106 Query: 121 RFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 DL E + P + LGP+P +F+A L + +K Sbjct: 107 GPRGFDLTEAGTRKSLAVYVVRDPQDVPGIAALGPDPFTEAFDAGMLAEILGASSQQIKG 166 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L +Q ++AGIGN Y E L A++SP +SL ++ + L + I +L +A+ Sbjct: 167 LLRSQSVIAGIGNAYSDEILHAARISPFATAKSL------DRETVQVLYEAIHGILGEAM 220 Query: 230 -DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +A G +D + ++ V+ +TG PC CG +R + A + YC CQ Sbjct: 221 AEAQGKPPKDLKDVK------RSHMRVHARTGLPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|50953934|ref|YP_061222.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950416|gb|AAT88117.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 287 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMM-----VMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVS 54 MPELPEV + +L V+ ++V + FD P AT I VS Sbjct: 1 MPELPEVTALAADLEKRLSGHVIDRLSVVAFAALKT---FDPSPDALHNAT----ITSVS 53 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R K+L I G L +I+HL +G P P + L + + Sbjct: 54 RHGKFLDIA-AGELHLIIHLARAGWIGWCQGPPPAPTGWPSKGPLAARLVLEDGSG-LDI 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLN 173 R+ + +V + P + LGP+P D +F ++ + + +K L N Sbjct: 112 TEAGTRKSLSISVVRD--PAEVPGVARLGPDPLDPAFTRDVFAAILAGQGRAQIKGVLRN 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE-IQKVLIDAIDAG 232 Q ++AGIGN Y E L AK+SP K +L + D LY +Q +++ L A Sbjct: 170 QGLIAGIGNAYSDEILHVAKMSPF-KPAALTDDE---LDRLYTAVQSTLREALTRADGLA 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S L+ ++ V+G+TG PC CG +R ++ A + YC CQ Sbjct: 226 ASELKSEK---------KSGLRVHGRTGRPC-PICGDTVREVIFADSTLQYCPTCQ 271 >gi|296141029|ref|YP_003648272.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] gi|296029163|gb|ADG79933.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] Length = 290 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 83/310 (26%), Positives = 122/310 (39%), Gaps = 58/310 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPE+ I + + TV + + ++ F PH AT + R Sbjct: 1 MPELPEITAIAQYVAEKAVGTTVRRVDVAALSVLKTFSPGPHELVGAT----VTGTDRIG 56 Query: 58 KY--LLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-----------SL 103 KY L E EG ++++VHL +G P+K + + + L Sbjct: 57 KYFVLWTEKEGARVALVVHLSRAGWLRWSEKLAPTPLKPGGKSPIALRVHVGPEGEGFDL 116 Query: 104 TNNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS---FNAIYLTHQ 159 T K+ V I +DP + TLGP+ S F AI Sbjct: 117 TEAGTQKRLAVWIVHDPSEIEMV--------------ATLGPDALTVSRAEFGAI----- 157 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + LKN L +Q+ +AGIGN Y E L AKLSP +SL + D LY + Sbjct: 158 LAGSRAQLKNLLRDQRTIAGIGNAYSDEILHTAKLSPFAGAKSLDEAQ---TDALYAAMH 214 Query: 220 -EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 E+ + ++ H+ ++ V+G+TG PC CG +R + A Sbjct: 215 TELDDAVARSVGQ---------HVATLKAEKRSGMKVHGRTGSPC-PVCGDTVREVSFAD 264 Query: 279 RSTFYCTYCQ 288 RS YC CQ Sbjct: 265 RSFQYCPTCQ 274 >gi|171915668|ref|ZP_02931138.1| formamidopyrimidine-DNA glycosylase [Verrucomicrobium spinosum DSM 4136] Length = 266 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPEL EV + K V+ + LH K+ F G + ++ K Sbjct: 1 MPELAEVYYYAKQ-WAAGKGKPVSRVELHAKSRVFRGCDTGELEEGLNGAALKEILTHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGM+G E +P + +H+H+ + L + +I+ D Sbjct: 60 QMLFKFSRGQWLAVHLGMTG----ETRVAPQPYEAAKHDHLVLHLRDRA------LIFTD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIV 177 PR+FG + + + ++ + L PE ++F LT + LK LL+Q+ Sbjct: 110 PRQFGLVQYHQGNALPEF--WQALPPEIGSDAFTTALLTGVLQRHARVPLKMLLLDQRYF 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN E +W+ KL P + SL T L + ++KV A+D Sbjct: 168 PGVGNWMADEIMWQMKLPPATPSGSLTGKQVT------ALHRTVKKVCKGAMDT------ 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +D S F + G C +++R ++ GR+ +C CQK Sbjct: 216 --VGVDWSDPPQDWLFRYRWEDGHVCPRCQAELVRESLR-GRTACWCPVCQK 264 >gi|199594640|gb|ACH90784.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 22/171 (12%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ S ++HLGMS Sbjct: 2 LQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALG-SAVLHLGMS 60 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-- 135 GS + P++ H+HV ISL N + +NDPRRFG SL +Q Sbjct: 61 GSLRV--LPGDTPLR--AHDHVDISLDNGRLLR-----FNDPRRFG-------SLLWQPA 104 Query: 136 ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +P L LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 105 GEIHPLLLGLGPEPLDAAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|225873334|ref|YP_002754793.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225793175|gb|ACO33265.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 298 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 118/291 (40%), Gaps = 23/291 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + I R+ + K + T + H + G+ I V R K+LLI Sbjct: 1 MPEGDTIFRSARTLHKALAGTIVTGFVTEFAQLAAVHDNTPVTGRTIEQVESRGKWLLIH 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G+L ++ H+ MSGS+ H +H+ + L N T Y I D Sbjct: 61 FSGDLILVTHMLMSGSW---HIYRRGERWRRGRSHMRVLLANET----YEAIAFDVPVAR 113 Query: 124 FMDLVETSLKYQYPPLRTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 F + P LGP+P AD S H + + N LLNQ+++AG+G Sbjct: 114 FYTSRTLARNSAIP---RLGPDPLRADFSAGDAAARIAAHPQE-EIANVLLNQQVIAGLG 169 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N++ E + LSP + L +P + L + + I+ DA + Y Sbjct: 170 NVFKSEVCFVCGLSPFARVHEL-----SPDQVAALLAAAERLMNINVSDAASGGVITYTG 224 Query: 242 IDGS--IGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFYCTYCQ 288 + + VYG+ G+ C CG I R+ A RST++C CQ Sbjct: 225 ARRTRNVSDAGARLWVYGRRGQAC-RRCGATILMRKQGSAARSTYWCPQCQ 274 >gi|328885453|emb|CCA58692.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 274 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + T+T R +LR P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTIWQTAHRLHTALAGRTLT-----RADLRV--PRYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + + +P P H I + YR+ Sbjct: 54 LARIEGGLTLHSHLRMDGAWRV-YVTGQRPHGGPDHQIRAILGNADHTAYGYRLP----- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPE---PADNSFNAIYLTHQFHKKNS-NLKNALLNQKI 176 ++L+ T+ + + LGP+ P + A T + + +L ALL+Q+ Sbjct: 108 ---VLELIRTT--DESGAVGHLGPDLLGPGWGAEEAEEATRRLLADPARSLGEALLDQRN 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN+Y E + A ++P L D+ +L+ + L+DA + Sbjct: 163 MAGIGNVYKSELAFLAGVTPWVPVGDL------GPDVPARLVATAHR-LLDA------NK 209 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G CL CG IR+ R T++C CQ+ Sbjct: 210 DRPDRRTTTTRRPGTPLHVYGRAGRSCL-RCGARIRKAELGDRVTYWCPGCQR 261 >gi|325068497|ref|ZP_08127170.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Actinomyces oris K20] Length = 156 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%) Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 +PA + + +K LL+Q +V+GIGNIY E LW A + +R Sbjct: 12 DPALQLAGPTGVVARVRASRRAIKTQLLDQGLVSGIGNIYADEGLWEAGVHGLRP----- 66 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 G ++ ++++ +V+ A++ GG+S YV ++G+ G+F YG+ G C Sbjct: 67 -GTGLGPRVVARILESTAEVMRRALEVGGTSFDALYVDVEGAAGFFARELGAYGRHGLEC 125 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 CG + R GRS YC CQ Sbjct: 126 -RRCGATMAREALGGRSHTYCPRCQ 149 >gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens] Length = 259 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 102/248 (41%), Gaps = 27/248 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L T+ + D P + GKKI+ R+ K Sbjct: 1 MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY------ 112 +L ++L+ GMSG+ II K +K PQ+ + Y Sbjct: 61 HLWLKLDSPPWPSFQFGMSGAVII------KGVKGPQYRSSKVGDEEEAFPTTYSKVHLV 114 Query: 113 -----RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D RRF + L+E K PP+ LG + +A L K ++ Sbjct: 115 LSTGVELAFTDKRRFARVRLLEDPSKV--PPISELGFDAYLELPSAEQLIEAMKTKKGSV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +AGIGN E L+ AK+ P + SL + T +L +++VL Sbjct: 173 KALLLDQSFIAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVT------RLHASVREVLEK 226 Query: 228 AIDAGGSS 235 AI S Sbjct: 227 AISVDADS 234 >gi|158315457|ref|YP_001507965.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] gi|158110862|gb|ABW13059.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] Length = 272 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 29/249 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + + K+LL+E + +HLG+ G++ + P V + LT + Sbjct: 41 GQVLAEAEAHGKHLLLEFGDEQILHIHLGIYGTYALGPGPAPVPT-----GAVRLRLTAD 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNS 165 T Y D R +L+ + LR LGP+P + + + + Sbjct: 96 TG-------YADLRGPNACELLAPG---EVKVLRDRLGPDPLRADADPALAWRRIERSRT 145 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + LL+QK+VAG GNIY E L+RA + P+ R L +D + ++ ++ Sbjct: 146 PIAVLLLDQKVVAGPGNIYRAEVLFRAGIHPLLPGRELA------RDQWAAIWADLVTLM 199 Query: 226 IDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 D + G H ++G VY +TG+PCL C +R + AGR Sbjct: 200 ADGVRTGRIDTVRPAHTPEAMGRPPRVDDHGGEVYVYRRTGQPCLI-CAAEVRTVQLAGR 258 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 259 NLFWCPACQ 267 >gi|254482652|ref|ZP_05095890.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] gi|214037011|gb|EEB77680.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] Length = 132 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 12/124 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K+ V + + LR+ P +G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHVKDQRVKRLLVREGRLRWPIPPDLPGLLQGQRIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYRVIYNDP 119 L +++VHLGMSGS + P + P +H+H I L + YNDP Sbjct: 61 LFHTAAG-ALLVHLGMSGSLRL-----VPPSQQPARHDHFDIELAGGNVLR-----YNDP 109 Query: 120 RRFG 123 RRFG Sbjct: 110 RRFG 113 >gi|224134470|ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1| predicted protein [Populus trichocarpa] Length = 307 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + D P F AA GK I+ R+ K Sbjct: 1 MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDGVSPSDFVAALVGKTIVSALRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L ++L+ GM+G+ I+ + K + ++ ++ +K + Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAVYIKGVAVTK------YKRSAVNDSDEWPSKYSKFFVQL 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L+E PP+ LGP+ L KK +K Sbjct: 115 DDGLELSFTDKRRFAKVRLLEDPA--SKPPISELGPDALLEPMTVDELHGSLSKKKVAIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q V+GIGN E L++A++ P++ SL + + L+K I+E V+ A Sbjct: 173 ALLLDQSFVSGIGNWIADEVLYQARIHPLQIASSLSRESSA---TLHKCIKE---VIEKA 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYC 287 ++ G S + F N + + + + + G+ I IV GR+T Y Sbjct: 227 VEVGADSSQ-----------FPNNWIFHSREKKSKKTFIDGKEIDFIVAGGRTTAYVPGL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|296169701|ref|ZP_06851319.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895698|gb|EFG75394.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/305 (25%), Positives = 120/305 (39%), Gaps = 51/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L +TV + + ++ FD P A G+ + R K Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVGALSVLKTFDPP---LGALHGRPVTGAHRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL ++ G L +I HL +G A P++ P + + RV Sbjct: 58 YLGLQ-AGELFLITHLSRAGWLRWSDKLGAAPLR-PGKGPIAL-----------RVHLGT 104 Query: 119 PRRFGFMDLVETSLKYQY-----------PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 P DL E + + P + LGP+ + + L + Sbjct: 105 PGEAPGFDLTEAGTQKRLAVWLVTDPQTVPGIAALGPDALELGVD--DLAGLLAGNTGRI 162 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K + +QK++AGIGN Y E L AK+SP L L L + VL D Sbjct: 163 KTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLTDEQ------LTTLHDAMVSVLRD 216 Query: 228 AID----AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 A+ G ++L+ G ++ V+ +TG PC CG +R + A +S Y Sbjct: 217 AVSRSVGQGAATLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQY 266 Query: 284 CTYCQ 288 C CQ Sbjct: 267 CPTCQ 271 >gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] Length = 264 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 43/298 (14%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPEL EVE R+ + K +T ++ ++ R +A +G RAK Sbjct: 1 MPELAEVEYYRKEWDAGLRKKITAVELHAGKRIFRGVDTKRLAATLKGAAYTGSEARAKL 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + G + + VHLGMSG +E AK + +H+H+ + + + ++++DP Sbjct: 61 MCFRFSGGVWLGVHLGMSGELRVE----AKDFEPGRHDHLVLRQSARS------LVFSDP 110 Query: 120 RRFGFMDLVETSLKYQY----PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLN 173 R+FG + E + ++ PP T PE +A F K+ + L K ALL Sbjct: 111 RQFGRVHFHEGRAEPEWWAKLPPAVT-SPEFTLERMSA------FLKRRARLAVKAALLV 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDA 231 Q G+GN E LW+A++ P R+L + K I +++ +EI +V +D I Sbjct: 164 QTAFPGVGNWMADEILWQARIDP----RALC-GKLSRKQIAAIWEKAREICQVSLDTIG- 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DY Q T + G ++ GR+T +C CQ+ Sbjct: 218 -----KDYSDPPEDWLIHQRW------TNKGLCPRDGLQLKTATIGGRTTRWCARCQR 264 >gi|300741669|ref|ZP_07071690.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380854|gb|EFJ77416.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 294 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 33/270 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF-------IIEHTSCAKPIKNP 94 +A G I++ K+L + L++ VHLG+ G++ +S P K Sbjct: 36 AALLDGASILNAYAHGKHLFVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIG 95 Query: 95 QHNHVTISLTNNTN------TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT------L 142 + + T T + R++ G+ DLV ++ P L Sbjct: 96 EKEYTAGEAEEYTGPPAPKGTTRCRIV----SEHGWADLVGPTICRTLNPDEVTQIRAKL 151 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GP+P + N K + + L++Q ++G+GNI+ E+L+R ++ P+R ++ Sbjct: 152 GPDPLNTDANPERFYTAARKSSRPIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKT 211 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L D L +L ++ + +L + G + +D I + + ++A VY Sbjct: 212 LTD------DELRRLWEDNKHLLTIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHH 265 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GEPC CG IR AGR ++C CQK Sbjct: 266 GEPC-PRCGTTIRMEEIAGRKLYWCPGCQK 294 >gi|326773635|ref|ZP_08232918.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326636865|gb|EGE37768.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 358 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 17/173 (9%) Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPR D + P L GP + + +K LL+Q + Sbjct: 195 GDPRPLLPADATHIARDLLDPALELTGP---------TGVVARVRASRRAIKTQLLDQGL 245 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+GIGNIY E LW A + +R G ++ ++++ +V+ A++ GG+S Sbjct: 246 VSGIGNIYADEGLWEAGVHGLRP------GTGLGPRVVARILESTAEVMRRALEVGGTSF 299 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV ++G+ G+F YG+ G C M+R + GRS YC CQ Sbjct: 300 DALYVDVEGAAGFFARELGAYGRQGLECRRCKATMVRETL-GGRSHTYCPRCQ 351 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + L + LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L + L+ ++ HLGMSG ++ T+ A +H + + +T Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTAATAPDAAPESHRAAAFLADPDT 112 >gi|311113768|ref|YP_003984990.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] gi|310945262|gb|ADP41556.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] Length = 294 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 33/270 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF-------IIEHTSCAKPIKNP 94 +A G I++ K+L + L++ VHLG+ G++ +S P K Sbjct: 36 AALLDGASILNAYAHGKHLFVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIG 95 Query: 95 QHNHVTISLTNNTN------TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT------L 142 + + T T + R++ G+ DLV ++ P L Sbjct: 96 EKEYTAGEAEGYTGPPAPKGTTRCRIV----SEHGWADLVGPTICRTLNPDEVAQVRAKL 151 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GP+P + N K + + L++Q ++G+GNI+ E+L+R ++ P+R ++ Sbjct: 152 GPDPLNTDANPERFYAAARKSSRPIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKT 211 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L D L +L ++ + +L + G + +D I + + ++A VY Sbjct: 212 LTD------DELSRLWEDNRHLLTIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHH 265 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GEPC CG IR AGR ++C CQK Sbjct: 266 GEPC-PRCGTTIRMEEIAGRKLYWCPGCQK 294 >gi|293397240|ref|ZP_06641513.1| endonuclease 8 [Serratia odorifera DSM 4582] gi|291420260|gb|EFE93516.1| endonuclease 8 [Serratia odorifera DSM 4582] Length = 263 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L + +T++ LR H+ G++I+ + R K L Sbjct: 1 MPEGPEIRRAADSLAAAVLEQPLTEVWFAFAQLR-----HYQPELIGQRIVAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + AK + P L T + ++ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWKV-----AKAGETPTTKR---DLRVRLQTAQQAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 E ++ +P L+ +GP+ D + +T + L LL+Q + Sbjct: 108 DITLGPREEIAM---HPFLQRIGPDVLDMALTQRQVTQRLLAPAFCRRQLGGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L+P + R L D L +L Q I + + G + Sbjct: 165 AGLGNYLRAEILWLAQLAPQHRPRDL------SADALQRLAQAILALPRLSYQTRGQAND 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D H G++ +F V+ ++GEPCL CG MI + + R ++C CQ Sbjct: 219 DVHH--GAL----FSFKVFHRSGEPCL-RCGAMIVKTTLSSRPFYWCPNCQ 262 >gi|226307944|ref|YP_002767904.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226187061|dbj|BAH35165.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 288 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 48/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V DI FD P A +G+ + +R K Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPP---ITALQGRDVTGAARFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIK------------NPQHNHVTISLTN 105 +L ++ +G L ++ HL +G +++ S P P+ LT Sbjct: 58 HLALDCDG-LWLVTHLSRAGWMRWLDNPSPTPPKPGKGPLALRVHFFTPEGLTPAFDLTE 116 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K+ V + NDP+ + P + LGP+ + + Sbjct: 117 AGTKKRLAVWVVNDPQ--------------EVPGIARLGPDAM--AVTEAEFAEILGGTS 160 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +KN++++Q ++AGIGN Y E L A+LSP + L TP+ I L ++ Sbjct: 161 ARIKNSIVDQSLIAGIGNAYSDEILHTARLSPFATSSRL-----TPEQI-STLYAVMRST 214 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L DAI+ S +D + G ++ V+ +TG PC CG ++R + A RS YC Sbjct: 215 LADAIER--SEGQDAARLKGEK---RSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYC 268 Query: 285 TYCQ 288 CQ Sbjct: 269 ATCQ 272 >gi|284988837|ref|YP_003407391.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] gi|284062082|gb|ADB73020.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] Length = 284 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 34/295 (11%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V +T D+ + FD P +A G ++ V+R K Sbjct: 1 MPELPEVEALTAFLREHAVGSVVTRVDLAAVQAIKTFDPP---LSALGGLELTGVARHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L +++ G L ++VHL +G H P P+ +++ + + Sbjct: 58 FLDLDVSG-LHLVVHLARAGWL---HWRTGLPTAPPKPGKGPLAVRVHLEDGDGFDLTEQ 113 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD---NSFNAIYLTHQFHKKNSNLKNALLNQK 175 R G V S + P + LGP+ ++F A+ ++ LK AL +Q Sbjct: 114 GTRKGLAVYVVRS-PAEVPGIARLGPDALAVDRDTFVAL-----LAGRSGQLKGALTDQT 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AGIGN Y E L A+LSP + L + +L ++ L +A Sbjct: 168 LLAGIGNAYSDEILHAARLSPFKMADKLSDDEA------LRLYDAMRATLTEA------- 214 Query: 236 LRDYVHIDGSI--GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L+ V + + G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 215 LQRQVGQEAATMKGEKRSGLQVHARTGLPC-PVCGDTVREVSFADTSLQYCPTCQ 268 >gi|320008179|gb|ADW03029.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 268 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 22/253 (8%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQH 96 P +A G+ ++D + R K+LL EG L++ HL M G++ + +H + P H Sbjct: 31 PRFATADLTGRTVLDATARGKHLLTRFEGGLTLHSHLRMEGAWRVFDHGERWR--GGPDH 88 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IY 155 + T YR+ ++L+ T + Q + LGP+ ++ Sbjct: 89 QIRAVLATAEHTAVGYRLP--------VLELLRTEDEEQV--VGHLGPDLLGPDWDPETA 138 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 L + + +ALL+Q+ +AG+GN+Y+CE + A+ +P L T Sbjct: 139 LRNLLADPGRRVGDALLDQRNLAGVGNVYMCELCFMARATPWLPVGELSLPLAT------ 192 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L+ K L+DA S + VYG+ G PCL C IR+ V Sbjct: 193 RLVS-TAKQLLDANRDRPVRTTTAATPAMSRRLPRERLFVYGRVGRPCL-RCRTPIRKTV 250 Query: 276 QAGRSTFYCTYCQ 288 + R T++C CQ Sbjct: 251 RDDRPTYWCPRCQ 263 >gi|325003039|ref|ZP_08124151.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia sp. P1] Length = 292 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 121/307 (39%), Gaps = 50/307 (16%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + +L V + + D+ FD +A G+ + SR K Sbjct: 1 MPELPEVEALAHHLREHAVYRPVARVDVASMSALKTFD---PAVSALVGRVVTGASRYGK 57 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNN---- 106 +L ++ +G L ++ HL +G T+ A KP + P V + Sbjct: 58 FLSVDFADRPDDGELHLVTHLSRAGWLRWHATAGATPPKPGRGPLQLRVHLDAVGGPGFD 117 Query: 107 ---TNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 T+K +Y +DP P + LGP+ + L Sbjct: 118 LTEAGTQKRLAVYLVDDP--------------ALVPGIAKLGPDALE--LTRPGLDELLD 161 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 LK + +Q VAGIGN Y E L A+LSP L +D L+ + + Sbjct: 162 GDTRRLKTLVTDQSTVAGIGNAYSDEILHTARLSPYATAGRLTTEQ---RDALF---EAV 215 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL DA+ G S + + G ++ V+ +TG PC CG +R + A RS Sbjct: 216 HGVLADAV--GRSVGQGAAELKGEK---RSGLRVHARTGLPC-PVCGDTVREVSFAERSF 269 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 270 QYCPTCQ 276 >gi|227354783|ref|ZP_03839200.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165101|gb|EEI49932.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 160 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 80/169 (47%), Gaps = 22/169 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I P + P+ H I L + K R Y DPR Sbjct: 60 LIELNQGW-IIVHLGMSGSVRI------LPEEQPEEKHDHIDLVFR-DGKVLR--YTDPR 109 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKN 164 RFG DL +S+ L LGPEP FNA YL Q +KKN Sbjct: 110 RFGAWLWCEDLATSSV------LAHLGPEPLSAQFNAQYLYQQSKNKKN 152 >gi|157369504|ref|YP_001477493.1| endonuclease VIII [Serratia proteamaculans 568] gi|157321268|gb|ABV40365.1| DNA-(apurinic or apyrimidinic site) lyase [Serratia proteamaculans 568] Length = 263 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L + + +T++ F FP H+ G++II + R K Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVG-------FAFPQLKHYRDRLIGERIIAIEPRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + K + P+ + + T + + Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWKV-----VKAGETPETKR-DLRVRLETADRAILLYSAS 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 G + +E Q+P L+ +GP+ D + + + + L LL+Q Sbjct: 108 EITVGPREEIE-----QHPFLQRIGPDVLDMTLTVAAVEQRLLSPAFRRRQLGGMLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+A+L+P K P+D+ + +Q + + L+ A+ Sbjct: 163 FLAGLGNYLRAEILWQAELAPQHK----------PQDLAPETLQRLAEALL-AVPRLSYQ 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 212 TRGQVDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIERTTLSSRPFYWCPGCQK 263 >gi|163793016|ref|ZP_02186992.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] gi|159181662|gb|EDP66174.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] Length = 300 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I L + +T + + L +A G ++ + R K + Sbjct: 1 MPELPDIAIYLEALERRILGAEITGLRIASPFLVRSVDPPIKSAV-GHRVESLRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+G L +++HL ++G ++ P+ + +L +T T + + R Sbjct: 60 VIGLDGELFLVLHLMIAGR--LQWAGAGAPLPGKKG---LAALDFDTGTLILTEMGSKKR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +L P G EP + + Q +N LK AL + + +GI Sbjct: 115 ASLHLVCGAAALDEHDPG----GVEPLEVDRDGFAAALQ--AENHTLKRALTDPHLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSPI ++ L + D + +L + + L+ I+ G + + D Sbjct: 169 GNAYSDEILHAAKLSPIALSQRLNE------DEITRLFEATRSTLLAWIERGRTEVGDRW 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ A + +GK G+PC C I+RIV A T YC CQ Sbjct: 223 PT--KVSAFRAAMAAHGKYGKPC-PVCATPIQRIVHAANETNYCPRCQ 267 >gi|297625311|ref|YP_003687074.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921076|emb|CBL55617.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 287 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 53/306 (17%) Query: 1 MPELPEVE----IIRRNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELP+VE +R +L+ V++ + V I + FD P A G+ + ++R Sbjct: 1 MPELPQVEALADFLRTDLVGSVIERLEVGAISALKT---FDPPPD---ALVGRTVTAINR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI----------SLTN 105 K+L ++ G L ++ HL +G + + IK P + + + LT Sbjct: 55 FGKHLDVD-AGGLHLVFHLARAGWLVWREKVPSTVIK-PGKSRIALRVRLQGGAGFDLTE 112 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKK 163 +K V I DP+ Q P + +LGP+P F A++ Sbjct: 113 AGTQRKLAVWIVRDPQ--------------QVPSIASLGPDPMAPGFTPAVFRQILAGAG 158 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + LK L +Q ++AGIGN Y E L AKLSP + +L D + +L I+ Sbjct: 159 RAQLKGILRDQHVIAGIGNAYSDEILHDAKLSPFKPAANLTD------DEVERLYAAIRD 212 Query: 224 VLIDAID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 L A + A G + RD + D + ++G G+PC CG I + A S Sbjct: 213 GLAAATERARGLAARD-IKADK-----RAQLRIHGHAGDPC-PVCGTPIASVNFADSSLQ 265 Query: 283 YCTYCQ 288 YC CQ Sbjct: 266 YCPVCQ 271 >gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] Length = 263 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 41/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV ++ + + + +I K + F SR KYL Sbjct: 1 MPELPEVAYQKKYADATILHKKIVEIETGDKKIYQSAKADFEKILTDNAFESTSRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++L+ N +++H GM+G +H P++ + + +++ ++ + P Sbjct: 61 FLKLKKNGVLVMHFGMTGKLDYYQHDD------TPKYTQLKLIFEDHS-----KLAFTCP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-QFHK----KNSNLKNALLNQ 174 R+F + L ++ ++Q LG +A+ +T +F K ++ +K L+NQ Sbjct: 110 RKFAKLYLAKSVEEFQQS--HNLGA-------DALAITEKEFLKICDGRSGTIKGLLMNQ 160 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AGIGN+Y E L++ K+ P K +L Q ++ I+E+ KV+ +A G Sbjct: 161 SLIAGIGNMYADEVLFQTKIHPKTKVNTLSQKQLKS---IFDKIEEVLKVVKEARIEGKR 217 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y+ G G C N G+ I + +GR+T++C CQK Sbjct: 218 VPESYLTRIRKEG-----------EGADCPRNNGK-IEQTKVSGRTTYFCPVCQK 260 >gi|312138559|ref|YP_004005895.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325676377|ref|ZP_08156056.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|311887898|emb|CBH47210.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325552938|gb|EGD22621.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L V + D+ FD P + +G+ + R K Sbjct: 1 MPELPEVEALAQFLRDHAVGAVVGRVDVAALSVLKTFDPP---ITSLQGRNVTGADRFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCA--KPIKNPQHNHVTISLTNNTNTKKYRVI 115 +L ++ +G L +I HL G I++ A KP K P V T + T + + Sbjct: 58 HLALDCDG-LWLIAHLSRGGWLRWIDNPGSAPPKPGKGPLAVRVHF-FTPDGETPAFDLT 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-QFHK----KNSNLKNA 170 ++ + +V L P + LGP +A+ +T QF + S +K A Sbjct: 116 EAGTKKRLAVWVVTDPL--LVPGIARLGP-------DALEVTRPQFGEILAGTTSRIKTA 166 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L++Q ++AGIGN Y E L A+LSP T L D + +L ++ L DA++ Sbjct: 167 LVDQSLLAGIGNAYSDEILHAARLSPFATTSKLA------PDEVDRLYDAMRAELSDAVE 220 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S ++ + G + +V+ +TG PC CG +R + A RS YC CQ Sbjct: 221 R--SVGQEAARLKGEK---RAGMTVHARTGMPC-PVCGDTVREVAYAERSFQYCPTCQ 272 >gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 24/243 (9%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + V K +T I K + P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 + ++L+ GM+G+ I+ + K + + T+ +K ++ Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTK------YKRSAVKDTDEWPSKYSKLFIEL 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L+E PP+ LGP+ KK +K Sbjct: 115 DDGLELSFTDKRRFAKVRLLEDP--ASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AGIGN E L+ A++ P++ SL + + + L++ I+++ + ++ Sbjct: 173 ALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRESC---ETLHQCIKQVIQYAVE- 228 Query: 229 IDA 231 +DA Sbjct: 229 VDA 231 >gi|227875301|ref|ZP_03993443.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] gi|227844206|gb|EEJ54373.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] Length = 222 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 10/142 (7%) Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D + + ++ + +K LL+Q V+GIGNIY E L+ A + P ++L + Sbjct: 77 DPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGED 136 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID--GSIGYFQNAFSVYGKTGEPCLS 265 L L++ V+ A++ GG+S D +++D G+ G F + VYG+ G+ C Sbjct: 137 ------LRNLLEVAASVMRHALEFGGTSF-DQLYVDSWGNPGDFASELQVYGRGGQAC-H 188 Query: 266 NCGQMIRRIVQAGRSTFYCTYC 287 CGQ + +IV GR+T +C +C Sbjct: 189 QCGQALDKIVLDGRATVFCAHC 210 >gi|222635968|gb|EEE66100.1| hypothetical protein OsJ_22131 [Oryza sativa Japonica Group] Length = 405 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 120/312 (38%), Gaps = 57/312 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR---FDFPH----------HFSAATRG 47 MPELPEVE RR L C+ R+ R D P F A G Sbjct: 1 MPELPEVEAARRALEA---------HCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVG 51 Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + I+ RR K L + L+ GM+G+ I+ K + +S T+ Sbjct: 52 RTIVAARRRGKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTK------YKRSVVSSTDEW 105 Query: 108 NTKKYRVI----------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +K + + D RRF + L E PP+ LGP+ ++ Sbjct: 106 PSKYSKFFVQLDDGLEFSFTDKRRFARVRLFEDP--ETVPPISELGPDALFEPMSSDSFA 163 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 +K +K LL+Q ++GIGN E L++++ P++ SL + + + L++ Sbjct: 164 DSLSRKKIGIKALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSRESC---EALHQS 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 IQE+ K V +D F + + + G+ GQ I I Sbjct: 221 IQEVVKYA--------------VEVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAG 266 Query: 278 GRSTFYCTYCQK 289 GR+T Y QK Sbjct: 267 GRTTAYVPQLQK 278 >gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gibberella zeae PH-1] Length = 392 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 126/306 (41%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRR 56 MPE+ EV I L + V+ ++ KN+ AA +GKKI+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASATDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTN----NT 107 KY I LE +++H GM+G I+ A K +K +H Sbjct: 61 GKYFWIALEKPPHLVMHFGMTGWIHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADN--SFNAIYLTHQFHKK 163 + + V + D RRFG + L+ Q+ PL GP+P + F YL + + Sbjct: 121 GSPEVEVAFTDSRRFGRVRLINCPGDEIRQHSPLVENGPDPVVDVDRFTEEYLHSKMRAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + T LYK+I+ + + Sbjct: 181 HVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQIT---TLYKMIRYVCQ 237 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +D + G S H F + K L N G+ I I GR++ Y Sbjct: 238 TAVDKL---GDSDEFPEHW-----LFNYRWGKGSKDAATKLPN-GEKIAFITVGGRTSCY 288 Query: 284 CTYCQK 289 QK Sbjct: 289 APGVQK 294 >gi|31789466|gb|AAP58579.1| putative fapy-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 42/257 (16%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNH 98 A+ G+ I + R K ++ E EG L ++ HL ++G F + P K H Sbjct: 42 ASVEGRTITALHRLGKRVVFEAEGELFLVFHLMIAGRFRWKPAGAPVPGKVGLLAIDFEH 101 Query: 99 VTISLTNNTNTKKYRVIYN-------DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 ++ LT TK+ +Y DP G ++++E L LR Sbjct: 102 GSLILTE-AGTKRQASLYVVSGADALDPHNPGGLEVMEAPLAVFASALR----------- 149 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 ++N +K AL + + +GIGN Y E L AK+SP R+T SL Sbjct: 150 ----------RENHTVKRALTDPHLFSGIGNAYSDEILHAAKMSPFRQTSSLTDEE---- 195 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 + +L + L D D + F+ +V+G+ G+PC CG + Sbjct: 196 --IARLFHATRHTLALWTDRLREETAD--RFPEKVTAFREGMAVHGRYGKPC-PVCGTPV 250 Query: 272 RRIVQAGRSTFYCTYCQ 288 +RIV A YC CQ Sbjct: 251 QRIVYAANEANYCVQCQ 267 >gi|255553261|ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 403 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R+ + + K + I K + P F AA GK +I R+ K Sbjct: 1 MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDGVSPSDFEAALVGKTLISAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L ++L+ GM+G+ I+ + K + ++ T+ +K ++ Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAIYIKGVAVTK------YKRSAVNDTDEWPSKYSKLFVEL 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L+ + PP+ LGP+ KK +K Sbjct: 115 DDGLELSFTDKRRFAKVRLLNNPV--SVPPISELGPDALLQPMAVDEFYKSLCKKKMPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++A++ P + S + + L K I+E+ Sbjct: 173 ALLLDQSFISGIGNWIADEVLYQARIHPQQSASSFTKESCA---TLLKCIKEV------- 222 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYC 287 + + ++ F N++ + + +P + G+ I I GR+T Y Sbjct: 223 -------IEKAIEVEADSSQFPNSWIFHSREKKPGKAFIDGKKIDFITSGGRTTAYVPEL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|285808428|gb|ADC35954.1| putative fapy-DNA glycosylase [uncultured bacterium 98] Length = 299 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 39/297 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA------ATRGKKIIDVS 54 MPELP++ ++ + + + H + +R P + A G+++ID+ Sbjct: 1 MPELPDI-------LLYLHALRPRIVGQHIEAVRLASPFLLRSIDPPLNALEGRRVIDLH 53 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R K ++I LEG L I+ HL ++G F + P K V + L + + Sbjct: 54 RLGKRIVIALEGELFIVFHLMIAGRFRWKPKGTRIPGK------VGL-LAIDFPAGSLLL 106 Query: 115 IYNDPRRFGFMDLV--ETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 +R + LV +L P L LG + +N LK AL Sbjct: 107 TEAGSKRQASLHLVAGRAALAAHDPGGLEVLGASVEE-------FVGALTAENHTLKRAL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 + + +GIGN Y E L A LSP + TRSL + G LY+ + + + I+ + + Sbjct: 160 TDPHLFSGIGNAYSDEILHAAGLSPFKLTRSLTGDEGRK---LYEATRGMLETWIERLQS 216 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F++ +V+GK G+PC CG ++R+ A YC CQ Sbjct: 217 EAGE-----EFPEKVTAFRSEMAVHGKYGKPC-PECGTPVQRVRYAANEANYCPSCQ 267 >gi|253702038|ref|YP_003023227.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] gi|251776888|gb|ACT19469.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] Length = 261 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 35/235 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLAVYAENLARKLTGKKIKTVSFHDRGRLNVAPDELSAALTGAKVAAVRRTGKQI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ + A+ + + V+I+ ++ + + +DP+ Sbjct: 61 SFQADNGAVLRVHLMLTGGFVL---TMAEQLDRLEAPVVSITFSDGSA-----LAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ------FHKKNSNLKNALLNQ 174 + + L P+P + +A+ L+ K + +K LL+Q Sbjct: 113 GWATL---------------ALNPQPDREAPDALELSADQLQQLCAKKPKTLIKALLLDQ 157 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ++ GIGN Y E LW A++SP L P + + L + I VL DAI Sbjct: 158 ALIGGIGNAYADEILWEARISPKSAAGKL------PPEAVSALARAIPAVLKDAI 206 >gi|18762494|gb|AAL78073.1| Fpg [Proteus mirabilis] Length = 108 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 7/106 (6%) Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY EAL+ + + P RK SL + D+L + I+ VL +I+ GG++L+D++ Sbjct: 4 IYASEALFASGIMPDRKANSLTEQEC---DVL---VNAIKTVLTRSIEQGGTTLKDFLQS 57 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 58 DGKPGYFAQELFVYGRKDKACLI-CGHTIESIKQGQRSTFFCRHCQ 102 >gi|115469160|ref|NP_001058179.1| Os06g0643600 [Oryza sativa Japonica Group] gi|51535473|dbj|BAD37370.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|51535507|dbj|BAD37426.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|113596219|dbj|BAF20093.1| Os06g0643600 [Oryza sativa Japonica Group] gi|215694501|dbj|BAG89494.1| unnamed protein product [Oryza sativa Japonica Group] Length = 400 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/312 (24%), Positives = 120/312 (38%), Gaps = 57/312 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR---FDFPH----------HFSAATRG 47 MPELPEVE RR L C+ R+ R D P F A G Sbjct: 1 MPELPEVEAARRALEA---------HCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVG 51 Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + I+ RR K L + L+ GM+G+ I+ K + +S T+ Sbjct: 52 RTIVAARRRGKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTK------YKRSVVSSTDEW 105 Query: 108 NTKKYRVI----------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +K + + D RRF + L E PP+ LGP+ ++ Sbjct: 106 PSKYSKFFVQLDDGLEFSFTDKRRFARVRLFEDP--ETVPPISELGPDALFEPMSSDSFA 163 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 +K +K LL+Q ++GIGN E L++++ P++ SL + + + L++ Sbjct: 164 DSLSRKKIGIKALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSRESC---EALHQS 220 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 IQE+ K V +D F + + + G+ GQ I I Sbjct: 221 IQEVVKYA--------------VEVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAG 266 Query: 278 GRSTFYCTYCQK 289 GR+T Y QK Sbjct: 267 GRTTAYVPQLQK 278 >gi|282862765|ref|ZP_06271826.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] gi|282562451|gb|EFB67992.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] Length = 286 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 46/302 (15%) Query: 1 MPELPEVEIIRRNL--MMVMKNMT-VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L +V K + V + + +D P A + + V R Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARVLPVAISVLKT-YDPPL---TALQDTTVTAVDRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS------LTNNTN 108 K+L I G L +++HL +G + A P K P ++ LT Sbjct: 57 KFLDIT-AGGLHLLIHLARAGWLRWQDGVPAAPTRPGKGPLALRTVLTDGEGFDLTEMGT 115 Query: 109 TKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 TK+ V + DP P + LGP+P +SF+ + + Sbjct: 116 TKRLSVHLVRDP--------------ADVPGVARLGPDPLADSFDRDAFALLLGGQRRQI 161 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K AL +Q ++AGIGN Y E L A++SP + T SL N+ L L ++ L D Sbjct: 162 KGALRDQSLIAGIGNAYSDEILHVARMSPFKLTTSLSDND------LTHLYTAMRATLKD 215 Query: 228 AIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ R G + ++ V+G+ G+ C CG I + + + YC Sbjct: 216 AVE------RSRGVAAGRLKAEKKSGMRVHGRAGQAC-PVCGDTILEVSFSDSALQYCPT 268 Query: 287 CQ 288 CQ Sbjct: 269 CQ 270 >gi|159040486|ref|YP_001539739.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] gi|157919321|gb|ABW00749.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] Length = 286 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 52/305 (17%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE + RR + + + + I L+ P +AA G+++ D R Sbjct: 1 MPELPEVEALADYLRRRAVGRRVDRLEIAAI----SALKTYDPAITAAA--GRQVTDARR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSG--SFIIEHTSCA--KPIKNPQHNHVTISLTNN----- 106 K+L + L+ +L +++HL +G F E S +P K P V + + Sbjct: 55 LGKFLDLVLDADLHLVIHLARAGWLQFREEFPSRGPLRPGKGPVALRVRLDDGSGFDLTE 114 Query: 107 TNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 T+K IY DP P + LGP+ + + + + Sbjct: 115 AGTQKSLAIYLVTDP--------------AVVPGVARLGPDAL--AVDPATFAERLRGRR 158 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K L +Q ++AG+GN Y E L A+LSP T L D L L + V Sbjct: 159 GQVKGVLTDQTVLAGVGNAYSDEILHTARLSPFALTSRLTD------DQLAALHTATRDV 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L +A+ R + G ++ V+ +TG PC CG +R + A S Y Sbjct: 213 LGEAVS------RSVGQRAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQY 265 Query: 284 CTYCQ 288 C CQ Sbjct: 266 CPACQ 270 >gi|312886552|ref|ZP_07746160.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] gi|311300955|gb|EFQ78016.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 118/296 (39%), Gaps = 50/296 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP++++ RNL +K T+ + L+ K L A G+ + +V R K Sbjct: 1 MPELPDLQVFSRNLTKALKGKTLAKVHVLNHKKLNVPVKE-LQEAIEGQILTEVKRVGKE 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI---Y 116 L +E + + +HL + G +SL N + +KY +I + Sbjct: 60 LHLEFKNGHVLGLHLMLHGQ---------------------LSLFNKHSEQKYTIIELLF 98 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPE----PADNSFNAIYLTHQFHKKNSNLKNALL 172 +D D +Q TL P+ P F+ YL + + +K LL Sbjct: 99 DDDTGLTLSD-------FQAAATPTLDPQDPGVPDALDFDLDYLKEKLAATRTAIKTVLL 151 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++ GIGN Y E LW AKLSP + N P + L + I+ VL DA Sbjct: 152 DQHVLRGIGNAYADEILWDAKLSPFSAS------NKIPDAQIKVLAKSIKHVLEDAEKQI 205 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D I G + F S K ++ G+ I + R T+Y Q Sbjct: 206 IKTHPDI--ISGEVRDFMQVHSSKKKQ-----TSTGETIHQKPVGSRKTYYTDEQQ 254 >gi|220919150|ref|YP_002494454.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957004|gb|ACL67388.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 321 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELP++E+ L + + I L L D P A G+++ V R+ K Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPP---LAEAEGRRVAAVRRQGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L++ L+G+L + +HL ++G + P K N T + Sbjct: 58 RLVLALDGDLHLALHLMIAGRLHWKDPGARLPGKA---GLAAFDFPNGTLV----LTEAG 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 +R + LV + L G EP D + ++N LK AL + + + Sbjct: 111 TKRRAALHLVRGAAALAA--LDRGGIEPLD--VDLAAFAAALRRENHTLKRALTDPSLFS 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI----DAGGS 234 GIGN Y E L RA+LSP+ T L + +L + ++VL + GS Sbjct: 167 GIGNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVT------AFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|296268041|ref|YP_003650673.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296090828|gb|ADG86780.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 292 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 126/294 (42%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L TV D+ + + P AA G+ I V R K Sbjct: 1 MPELPEVEALAAFLRARAGGRTVAGADVVAVQALKTVNPP---PAALVGRAITGVHRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFII-EHTSCAKPIKN---PQHNHVTISLTNNTNTKKYRV 114 +L +E EG L ++ HLG SG + + A+P ++ P V +S + + Sbjct: 58 FLDLECEG-LHLVAHLGRSGRLRWRDDLTGARPARSGRGPLAARVRLSPDPEGRAPGFEL 116 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 PR+ + +V + P + LG +P + F L + +K L +Q Sbjct: 117 HEAGPRKRLALYVVHD--PAEVPGIAGLGIDPLSDGFTVARLREIVRAGCTQVKGLLRDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++++GIG+ Y E L A+LSP + SL D + L I VL +A+ + Sbjct: 175 RLISGIGDAYSDEILHAARLSPFKLADSLTD------DQVAALHSAIVTVLGEAVAEARA 228 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + V+G+TGE C + CG IR + A + YC CQ Sbjct: 229 LAAERPEP-----HPRLRMRVHGRTGEACHA-CGDTIREVSFADSALQYCPTCQ 276 >gi|255326609|ref|ZP_05367686.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296349|gb|EET75689.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 294 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 33/270 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ--- 95 +A G I K+L + E +L++ VHLG+ G++ E + A I P+ Sbjct: 36 AALLDGHTITGAYAHGKHLFVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIG 95 Query: 96 -------HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP--LRT----L 142 +T + R++ G+ DLV ++ P +RT L Sbjct: 96 EKEYAAGEGEPYAGPPEPKSTVRCRIVSE----HGWADLVGPTICRTLTPEEVRTVRSKL 151 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GP+P + + K + + L++Q ++G+GNI+ E+L+R ++ P+R +S Sbjct: 152 GPDPLNPDADPEQFYRAARKSSRPIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKS 211 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L L +L ++ + +L+ + G + D I + + +A VY Sbjct: 212 LSDEE------LERLWEDNKHLLVIGVRVGRIITTEPEDRPGIPETEAWPDHANYVYMHH 265 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GEPC CG IR AGR ++C CQK Sbjct: 266 GEPC-RRCGTTIRMEEIAGRKLYWCPGCQK 294 >gi|256393641|ref|YP_003115205.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] gi|256359867|gb|ACU73364.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] Length = 288 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 48/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV---TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEV+ + L + V T + + +D P +A G+ + V+R Sbjct: 1 MPELPEVQALAAFLDEHLAGHAVAAATPVAIQALKT-YDPPL---SALEGQVVSGVTRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTN------ 108 K+L + G++ +++HL +G + T+ +P K P V + + Sbjct: 57 KFLDFSV-GDVHLVLHLARAGWVRWQEELPTAPPRPGKGPLALRVRMEEPAGSGIDVTEY 115 Query: 109 -TKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 TKK +Y DP + P + LG +P F A L + Sbjct: 116 GTKKGLAVYVVRDP--------------AEVPGIARLGIDPLSAEFTAEVLAGLLDGERR 161 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K L +Q ++AGIGN Y E L A++SP + L TP D + L Q I L Sbjct: 162 QIKGFLRDQSVLAGIGNAYSDEILHAARMSPYKLAAKL-----TP-DEVADLYQVIIGTL 215 Query: 226 IDAID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 DA++ + G ++D ++ V+G+TGE C CG IR + A + YC Sbjct: 216 TDAVERSRGLPMKDLKS------EKKSGLRVHGRTGEKC-PVCGDTIREVSFADSALQYC 268 Query: 285 TYCQ 288 CQ Sbjct: 269 PTCQ 272 >gi|91215880|ref|ZP_01252849.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] gi|91185857|gb|EAS72231.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] Length = 260 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 42/295 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + + + +T++ L F A +++I+ R KYL Sbjct: 1 MPELPEVQGYKTYIDSTSLHQRITEVDCRDTKLLKKPKADFDAYLYNQELIETQRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G +++H GM+G H + + P+ H+ +S N + + + R Sbjct: 61 FLKTTGKKILVMHFGMTGR---PHYYKNEEDR-PKFGHLELSFENG-----FHFAFENKR 111 Query: 121 RFGFMDLVETSLKYQYP-----PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +FG+ DL+++ ++ R L E SFN + +++K +++Q Sbjct: 112 KFGWWDLIDSIADFKASHKLSDDARDLTLEDFKQSFNG---------RKTDIKKIIMDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 + AG+GN E L+++K+ P T+ +I+ T ++ ++++ +V I+ Sbjct: 163 VAAGVGNWMADEILYQSKIHP---TKKVIEMTDTDIKSVFDAMKKVIEVAIE-------- 211 Query: 236 LRDYVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ H F F + + K G C + G I +I GR+T++ Q+ Sbjct: 212 --NHAHYKD----FPKTFLMHFRKEGATCY-HTGAQIEKIKVGGRTTYFSPQWQE 259 >gi|288922013|ref|ZP_06416221.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] gi|288346629|gb|EFC80950.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] Length = 292 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 80/303 (26%), Positives = 120/303 (39%), Gaps = 42/303 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++TV + N F FS G ++ V R K+L Sbjct: 1 MPELPEVEALAAFLRETAADLTVARVEPVAVNALKTFDPPFSTLV-GAALVAVQRHGKFL 59 Query: 61 LIELEG----NLSIIVHLGMSGSF---IIEHTSCAKPIKNPQHNHVTIS------LTNNT 107 + L ++ HL +G + + A+P ++P V + LT Sbjct: 60 DLVFAAADGERLDLVTHLARAGWLQWKAKQPRTPARPGRSPLALRVVFTDGSGFDLTEAG 119 Query: 108 NTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-S 165 K+ V + DP Q + LG +P F L + + Sbjct: 120 TQKRLAVYLVRDP--------------AQVDGISRLGVDPLSPEFTRDVLAALLAESGRA 165 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +Q +AG+GN Y EALW A+LSP R +L + +L + VL Sbjct: 166 QIKGVITDQSKIAGVGNAYSDEALWVARLSPFRPAAALTTME------VDQLHAAVTGVL 219 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DA DA + + +G V+G+TG PC C IR + + RS YC Sbjct: 220 RDAADAARGLAAADLKAEKKLG-----LKVHGQTGLPC-PRCADTIREVSFSDRSLQYCP 273 Query: 286 YCQ 288 CQ Sbjct: 274 TCQ 276 >gi|326507936|dbj|BAJ86711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 121/302 (40%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRA 57 MPELPEVE RR L V + +T + K + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRITRCAVADDPKVVVAAAGRVAFERAMVGRTILAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-- 115 K L + L+ GM+G+ I+ + K + ++ ++ +K + Sbjct: 61 KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTK------YKRSAVNSADDWPSKYSKFFVE 114 Query: 116 --------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RRF + L + PP+ LGP+ + KK + Sbjct: 115 LDDGLEFSFTDKRRFARVRLFDDP--ETVPPISELGPDALFEPMSVDNFVDSLSKKKIGI 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+++K P++ SL + + + L++ IQE+ K +D Sbjct: 173 KALLLDQSFISGIGNWIADEVLYQSKTHPLQIASSLTRESC---EALHQSIQEVVKYAVD 229 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +D F + + + G+ G+ I I GR+T Y Sbjct: 230 --------------VDADCDRFPVEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPEL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|256824011|ref|YP_003147971.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256687404|gb|ACV05206.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 314 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 129/314 (41%), Gaps = 42/314 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ V ++ L + + G+ + DV R K L Sbjct: 1 MPELPEVEGLAAALRERLEGRVVAEVALASFSA-LKTVDVLPQSLHGRPVDDVRRYGKLL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH---VTISLTNNTN-------TK 110 + ++G ++VHL M ++ H + P V I+L + + T+ Sbjct: 60 DLVVDGT-HVVVHL-MRAGWVTWHDEVPRTRLRPGGKSPVAVRITLDDGSGMDLYEAGTR 117 Query: 111 KYRVIY--NDPRRFGFM-----DLVETSLKYQYPPLRTLGPEPADNSFNA--------IY 155 K +Y +DP + D V + PPL + + A + Sbjct: 118 KGMAVYLADDPGTLEALTTLGPDAVSLRPPLESPPLVGVDTTTGEVGVTASTTPEERVAF 177 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + +K L +Q +V+GIGN + E L A+LSP +L + Sbjct: 178 WVEALEGRRTQIKRVLRDQSVVSGIGNGWSDEILHTARLSPFVLAATLEAEE------VG 231 Query: 216 KLIQEIQKVLIDAID-AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L + + +VL+ A + A G + D DG G + V+G+TGE C CG ++R + Sbjct: 232 RLAEAVHEVLVGAAERAVGRAPADL--KDGKRGGMR----VHGRTGEEC-PVCGDVVREV 284 Query: 275 VQAGRSTFYCTYCQ 288 A S YC CQ Sbjct: 285 TYADSSLQYCATCQ 298 >gi|197124421|ref|YP_002136372.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] gi|196174270|gb|ACG75243.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] Length = 321 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELP++E+ L + + I L L D P A G+++ V R+ K Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPP---LAEAEGRRVAAVRRQGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L++ L+G+L + +HL ++G + P K N T + Sbjct: 58 RLVLALDGDLYLALHLMIAGRLHWKDPGARLPGKA---GLAAFDFPNGTLV----LTEAG 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 +R + LV + L G EP D + ++N LK AL + + + Sbjct: 111 TKRRAALHLVRGAAALAA--LDRGGIEPLD--VDLAAFAAALRRENHTLKRALTDPSLFS 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI----DAGGS 234 GIGN Y E L RA+LSP+ T L + +L + ++VL + GS Sbjct: 167 GIGNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTA------FREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|124005766|ref|ZP_01690605.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] gi|123988834|gb|EAY28440.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] Length = 265 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 46/298 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR---- 56 MPELPEVE ++ LH+K ++ + A + + +V+ + Sbjct: 1 MPELPEVERFKQYF---------EGTALHQKVVQVEIADAGVLACTAETLKEVAEKHTFD 51 Query: 57 -----AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 KYL IE + +++H GMSGS P+ V L N Sbjct: 52 KTDRIGKYLFIETSADKVLMIHFGMSGSLKYYRDD------PPRFGRVVFHLANG----- 100 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + ++ PR+FG +D+ + YQ + L + S+ + +K L Sbjct: 101 FHLAFDCPRKFGRIDVADNVKAYQ--AKKKLSTDAYKMSWEE--FEQNTAGRKGLIKPLL 156 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 LNQ++ AG+GN E L++A++ P +T L +N L + +++ +L A+ Sbjct: 157 LNQQVAAGVGNWIADEILFQARVHPETRTNKLSKNE------LRLVYDKMRDILQTAV-- 208 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S +Y H YF + + E C NCG + + GR+T+ C CQ+ Sbjct: 209 --SHEANYNHYPKD--YFIHRRGWTDQNTENC-PNCGTKVHYMKVGGRATYLCEVCQE 261 >gi|134101245|ref|YP_001106906.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007765|ref|ZP_06565738.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133913868|emb|CAM03981.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 258 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 125/299 (41%), Gaps = 52/299 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELP+VE RR + V D+ + FD RG+ + + R K Sbjct: 1 MPELPDVEGFRRVAAEAARQ-RVRDVEV------FDPQVVRGLVEQVRGRYLGEARRHGK 53 Query: 59 YLLI-----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +L++ + + ++VH GM+G + C H+ V + LT + Sbjct: 54 WLVLPTSSRDGDDPPWLLVHFGMTGMLL----RCPPGEDVHAHDRVVLHLTRDD------ 103 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD---NSFNAIYLTHQFHKKNSNLKNA 170 + Y D R+ M +V S + L LGP+ A F A + LK+A Sbjct: 104 LRYRDMRKLKGMRVVRRSEVDGF--LDELGPDAAAVPLPDFRAC-----VGRGRRALKSA 156 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L++Q VAG+GN+ V E LWRA+L P T L +G D L + ++ VL A Sbjct: 157 LMDQSTVAGLGNLCVDEILWRARLDPKTPTTEL---DG---DRWRSLHRTMRSVLRQAER 210 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AG R G+ + GE C C +RR AGR+T +C CQ+ Sbjct: 211 AGRVPDRPSW----LTGHRDDP-------GERC-PRCSGTLRRAKVAGRTTVWCPACQR 257 >gi|29829043|ref|NP_823677.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29606149|dbj|BAC70212.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 280 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVYQAARRLHSALAGKVLT-----RSDLRV--PKFATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + + P H I T + + YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGSWKV-YAPGQRWSGGPAHQIRAIFGTADRTSVGYRLP----- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 ++L+ T+ +++ + LGP+ ++ + + L ALL+Q+ +AG Sbjct: 108 ---VLELLRTADEHRA--VGHLGPDLLGPDWDPDRARENLLRDPARPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + +P L P + L +L +K+L D S Sbjct: 163 IGNVYKSELCFLLRATPWLPVGDL------PAEHLAQLPALAKKLLETNRDRPARS---- 212 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G + VYG+ PCL CG +R Q R T++C CQ Sbjct: 213 -----TTGRREQRLFVYGRAPRPCL-RCGTPVRVADQGDGSRERPTYWCPACQ 259 >gi|302920238|ref|XP_003053028.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733968|gb|EEU47315.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 376 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRR 56 MPE+ EV I L + V+ V+ + KN+ AA GK+I+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIGDKNVFGKVGTSGEEVEAALEGKEIVSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTN----NT 107 KY I LE +++H GM+G I+ A K +K+ + Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEKTAYTNYYKKMKDSELEQWPPKFWKFQFKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADN--SFNAIYLTHQFHKK 163 + V + D RRFG + LV+ +Y PL GP+P + F YL + + Sbjct: 121 GSPGVEVAFTDARRFGRVRLVDCPGDQIRKYSPLVENGPDPVVDLDRFTEDYLRGKMRAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + + T LYK+I+ + + Sbjct: 181 HVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDEFDDSQVT---TLYKMIRYVCQ 237 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +D + G S H + N G G G+ + I GR++ Y Sbjct: 238 TAVDKL---GDSDEFPEH------WLFNYRWGKGSKGTATKLPNGEKLAFITVGGRTSCY 288 Query: 284 CTYCQK 289 QK Sbjct: 289 APGVQK 294 >gi|302771624|ref|XP_002969230.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] gi|300162706|gb|EFJ29318.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] Length = 268 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 27/242 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNM-----TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE RR + + K + D + FD A K+I+ R Sbjct: 1 MPELPEVEAARRAVELHCKGLICRASVADDTTVIEGMAPFDMQRRLVA----KRIVAAHR 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-------HVTISLTNNTN 108 + K L +EL+ SI GM+G+ ++ K +++ + + + L +T Sbjct: 57 KGKQLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTG 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + + D RRF + L++ PP+ LGP+ + KK + +K Sbjct: 117 VE---MSFTDKRRFARVRLIQDP--RLSPPISELGPDAYTELPDETTFADSVAKKKTAIK 171 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AGIGN E L+++++ P + +L + +L I++V++ A Sbjct: 172 AVLLDQSFIAGIGNWIADEVLYQSRIHPEQPASTLTAID------CERLRGAIKEVVMTA 225 Query: 229 ID 230 +D Sbjct: 226 VD 227 >gi|238060842|ref|ZP_04605551.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237882653|gb|EEP71481.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 283 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 27/245 (11%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+LL G L++ VHLG+ G F V + LT++ ++ R Sbjct: 51 GKHLLHHHAGGLTLHVHLGLYGRFADGPGEPPP-----PVGQVRLRLTSDGSSTG-RTGS 104 Query: 117 NDPRRFGFMDL-VETSLKYQYPP----LRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 P ++DL + + PP LR LGP+P + + + + L Sbjct: 105 ESPDDRHWLDLRGPNACELLTPPEVAALRDRLGPDPLRADADPARAYARISRSPTPLAAL 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG G I+V EAL+RA LSP+ R L +L ++ +++ A++ Sbjct: 165 LLDQSVVAGTGLIFVTEALFRAGLSPLLPGRELAPAR------WRELWIDLVELMTRAVE 218 Query: 231 AGG-SSLRDYVHIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 G ++RD H+ + G VY + G+PC CG +RR AGR+ ++ Sbjct: 219 VGRIDTVRD-AHLPEATGRAPRVDRHGGEVYVYRRPGQPC-HVCGDEVRRGALAGRNLYW 276 Query: 284 CTYCQ 288 C CQ Sbjct: 277 CPTCQ 281 >gi|256825591|ref|YP_003149551.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688984|gb|ACV06786.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 262 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + + +T R +LR+ P + G+ ++V R K+L Sbjct: 1 MPEGDTVWRTARRLHLALAGRELT-----RTDLRW--PSLATVDLTGRTTLEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + P + P ++ T Sbjct: 54 LHRIEGGLTLHSHLRMEGSWRVH--PAPGPRRVPSTTRAVVASTEFVAVGTS-------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 G +DL +T + + LGP+ ++ + S L ALL+Q+I AG Sbjct: 104 -LGMLDLADTRAEDDL--VGHLGPDLLGPDWDRDRAMAGYAAAGSRPLGEALLDQRIAAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI-QKVLIDAIDAGGSSLRD 238 IG +Y E+L+ ++SP L D L++++ Q +L++ A + D Sbjct: 161 IGTMYAAESLFLRRVSPWTTVAELT------TDQLWRVVDTARQALLVNCARAVQRTTPD 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR----RIVQAGRSTFYCTYCQ 288 + V+G+ PCL NCG IR A R F+C CQ Sbjct: 215 ---------TMRELKWVHGRADRPCL-NCGTPIRVDPIGAAPADRVMFHCPVCQ 258 >gi|94968014|ref|YP_590062.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94550064|gb|ABF39988.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] Length = 299 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 123/303 (40%), Gaps = 51/303 (16%) Query: 1 MPELPEV-----EIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELP++ + R L ++ + +T L R D P A K+++ + R Sbjct: 1 MPELPDITAYLTALEPRVLGKTLQRVRITSPFLLRT---IDPPLE---AVERKRVLALRR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKK 111 K ++ LE +L +++HL ++G + A +N + ++ LT ++ Sbjct: 55 IGKRIVFGLEDDLWLVLHLMIAGRLHWKAAGVALKGRNYLAALDFDDGSLVLTEAGAKRR 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD------NSFNAIYLTHQFHKKNS 165 L LRT+ P D ++F A +N Sbjct: 115 ----------------ASLHLFRGEAALRTVDPGGIDVFTADLDAFRAALTI-----ENR 153 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 LK AL + + ++GIGN Y E LW A+LSPI +T L + LY + + Sbjct: 154 TLKRALTDPRFLSGIGNAYSDEILWAAQLSPIAQTHKLKSDEWQR---LYDATRATLQTW 210 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 ID A + + F+ +V+GK GEPC CG+ + RI A T YC Sbjct: 211 IDRFAAEAAK-----KFPEKVTAFRPEMAVHGKYGEPC-PRCGEKVLRIRYADNETNYCA 264 Query: 286 YCQ 288 CQ Sbjct: 265 RCQ 267 >gi|83816661|ref|YP_444607.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] gi|83758055|gb|ABC46168.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] Length = 265 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 29/235 (12%) Query: 1 MPELPEVEIIRRNLMMV-----MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELP+ + RR L + + TV D + L PH RG+ + D R Sbjct: 1 MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLE---PHRLGEVLRGRTLTDTHR 57 Query: 56 RAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K++ + E + +H GM+G + P++ +V + + + Sbjct: 58 HGKHVFVRYGEETGWLALHFGMTGRVQVVPDGTM-----PEYAYVQVHFEDGGA-----L 107 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + PR+F + LV+T + + LGP+ +A F + +K LL+Q Sbjct: 108 AFECPRKFARVRLVDTPDAFVE--AKDLGPDARRADVDAFLAP--FASRRGAIKGRLLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 +VAG+GNIY EAL++ + P L + + L L IQ+VL AI Sbjct: 164 SVVAGLGNIYADEALYQEGIHPRTTVPELSETD------LRGLYDAIQRVLDAAI 212 >gi|239944741|ref|ZP_04696678.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 15998] gi|239991205|ref|ZP_04711869.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 11379] gi|291448200|ref|ZP_06587590.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291351147|gb|EFE78051.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 289 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 75/290 (25%), Positives = 120/290 (41%), Gaps = 55/290 (18%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R +LR P +A G+ ++DV+ R K+LL +EG L++ HL M G++ + Sbjct: 23 LTRSDLRV--PRFATADLTGRTVLDVTARGKHLLTRIEGGLTLHSHLRMDGAWRV-FAPD 79 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P H I NT V Y R ++L+ T + + + LGP+ Sbjct: 80 ERWRGGPGHQIRAIL----GNTGHTAVGY----RLPVLELLRTDEEDRA--VGHLGPDLL 129 Query: 148 DNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ AI L + L ALL+Q+ +AGIGN+Y E + A+++P +L Sbjct: 130 GPDWDPAIALDRLLAVPDRPLGEALLDQRNLAGIGNVYKSELCFLARVTPWLPVGAL--- 186 Query: 207 NGTPKDILYKLIQEIQKVL---------------------------IDAIDAGGSSLRDY 239 P +L +L+ +++L +D+G R Sbjct: 187 ---PDGVLPRLVTLAERLLHANRDRPTRTTTITSELRTPPTRGPGPAPVLDSGRPRPRPP 243 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + Q VYG+ PCL CG IR Q R T++C CQ Sbjct: 244 HRV-------QERLYVYGRARRPCL-RCGTPIRLAGQDDRPTYWCPGCQS 285 >gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] Length = 390 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 118/296 (39%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + K + I K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K +K+ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLANPTSVS--PISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ SL + + L+ I+E+ Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSLSKEQC---EALHTSIKEV------------- 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYCQK 289 + V +D F + + + + +P + G+ I I GR+T Y QK Sbjct: 223 -IEKAVEVDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277 >gi|302870627|ref|YP_003839264.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|302573486|gb|ADL49688.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] Length = 286 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 116/305 (38%), Gaps = 52/305 (17%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE + R + ++ V I + +D P +A G+ + R Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKT---YDPP---PSAVAGRAVTGAGR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSF----IIEHTSCAKPIKNPQHNHVTIS------LTN 105 K+L + + L ++VHL +G T+ +P K P V + LT Sbjct: 55 YGKFLDVRFDEGLHLVVHLARAGWLHYREAFPATTPLRPGKGPIAVRVRLDDGSGFDLTE 114 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 KK + DP Q P + LGP+ + + + Sbjct: 115 AGTQKKLAAYLVTDP--------------AQVPGVAKLGPDALEADLPT--FAERLRSRR 158 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K L +Q ++AG+GN Y E L A+LSP T L D L L + V Sbjct: 159 GQVKGVLTDQSVLAGVGNAYSDEILHAARLSPFAITDRLTD------DQLAGLHAATRTV 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L DA+ R + G ++ V+ + G PC CG +R + A S Y Sbjct: 213 LGDAVR------RSMGQRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQY 265 Query: 284 CTYCQ 288 C CQ Sbjct: 266 CPTCQ 270 >gi|18404050|ref|NP_564608.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana] gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 390 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 118/296 (39%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + K + I K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K +K+ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLANPTSVS--PISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++GIGN E L++A++ P++ SL + + L+ I+E+ Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSLSKEQC---EALHTSIKEV------------- 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYCQK 289 + V +D F + + + + +P + G+ I I GR+T Y QK Sbjct: 223 -IEKAVEVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQK 277 >gi|322711093|gb|EFZ02667.1| formamidopyrimidine-DNA glycosylase [Metarhizium anisopliae ARSEF 23] Length = 372 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 25/261 (9%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHV 99 AA RGK+++ + KY I L+ +++H GM+G I E T+ K + + + Sbjct: 46 EAALRGKQVVSAGNQGKYFWITLDKPPHLVMHFGMTGWVHIRGEKTAYTNYYKKMKDSEL 105 Query: 100 TISLTN-------NTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--D 148 T + V + D RRFG + LV+ ++ PL+ GP+P Sbjct: 106 TTWPPKFWKFHLKTEGKPEVEVAFTDARRFGRVRLVDCPGADIRKHTPLKENGPDPVIDT 165 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 + F YL + ++ +K LL+Q +++GIGN E L++AKL P + + S Sbjct: 166 DRFTEEYLRGKMQARHVPVKALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE- 224 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 + KL + I+ V A+D G S + H F + + GK L N G Sbjct: 225 -----IKKLYESIRYVCQTAVDKLGDSDQFPEHW-----LFNHRWGKGGKGSSSKLPN-G 273 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 + + I GR++ Y QK Sbjct: 274 EKLAFITVGGRTSCYAPKVQK 294 >gi|254391826|ref|ZP_05007021.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|197705508|gb|EDY51320.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 240 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 29/256 (11%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P + +A G++++ R K+ L EG L++ HL M G++ + + +P P+H Sbjct: 4 PRYETADLTGRRVLKEVPRGKHKLARFEGGLTLHSHLRMDGAWRV-FPAGERPRGGPEHQ 62 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + T++ YR+ ++L+ T+ + + + LGP+ ++ Sbjct: 63 IRAVLGTSSHTAVGYRLP--------VLELLRTTDEQKV--VGHLGPDLLGPDWDPAAAR 112 Query: 158 HQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + S L ALL+Q+ +AGIGN+Y CE + A ++P L P+ +L + Sbjct: 113 ERLLADPSRPLGEALLDQRNLAGIGNVYKCELAFLAGVTPWLPVGEL------PEGVLER 166 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR--I 274 L+ ++L + DA + GS + V+G+ G PC CG +RR Sbjct: 167 LLATAHRLLEENRDA----VERRTTAAGS--RAGSRLHVHGRAGRPC-PRCGTPVRRSGP 219 Query: 275 VQAG--RSTFYCTYCQ 288 +AG R +++C CQ Sbjct: 220 GRAGDERISYWCPGCQ 235 >gi|134096732|ref|YP_001102393.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133909355|emb|CAL99467.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 275 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 105/252 (41%), Gaps = 39/252 (15%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNP------QHN 97 G+ + +R KYL ++ EG L ++ HL +G + + KP + P Sbjct: 37 GRTVTGATRYGKYLDLDCEG-LHLVFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGG 95 Query: 98 HVTISLTNNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 V LT KK + DP + P + LGP+ S + L Sbjct: 96 GVGFDLTEAGTQKKLSAWVVEDP--------------AEVPGIAKLGPDAL--SLDVEGL 139 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 T + +K L +Q ++AGIGN Y E L AKLSP L D + + Sbjct: 140 TAVLSGRTERIKTVLTDQSMIAGIGNAYSDEILHAAKLSPYATAGRL------DADAVER 193 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L ++++L DA++ S +D + ++ V+G+TG PC CG +R + Sbjct: 194 LHATMREILTDAVER--SLKQDAARLKAE---KRSGMRVHGRTGLPC-PVCGDKVREVSF 247 Query: 277 AGRSTFYCTYCQ 288 A RS YC CQ Sbjct: 248 ADRSLQYCATCQ 259 >gi|111226069|ref|YP_716863.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111153601|emb|CAJ65359.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 292 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 79/307 (25%), Positives = 118/307 (38%), Gaps = 50/307 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L V + + L+ FD P +A G + V R K Sbjct: 1 MPELPEVDALAAFLRETALGRVVERVEPVAVSALKTFDPP---VSALHGAALAAVERHGK 57 Query: 59 YL----LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 +L + L ++ HL +G + + A P + P + + RV Sbjct: 58 FLDLVFALPTGERLDLVTHLARAGWLRWKPSQPAAPAR-PGRGPLAL-----------RV 105 Query: 115 IYNDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 ++D R GF DL E + + P + LG +P F L Sbjct: 106 TFDD--RSGF-DLTEAGTQKRLAVYVVRDPAEVPGIARLGLDPLGADFTVAALEEILAAA 162 Query: 164 N-SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + LK L +Q +AG+GN Y EALW A+LSP + L + Sbjct: 163 GRAQLKGVLTDQSRLAGVGNAYSDEALWTARLSPYKPASGLSAAE----------TASLH 212 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNA-FSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 L+ + A S G + + A SV+G+ G PC CG +R + A R+ Sbjct: 213 AALVGVLTAARDSAAGLAA--GELKAEKKANLSVHGRAGSPC-PRCGDTVREVSFADRAL 269 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 270 QYCPTCQ 276 >gi|325128283|gb|EGC51167.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 72 Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 +++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG+ +PC CG ++ + Sbjct: 1 MVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETL 59 Query: 277 AGRSTFYCTYCQK 289 R TFYC CQK Sbjct: 60 GQRGTFYCPNCQK 72 >gi|167948611|ref|ZP_02535685.1| formamidopyrimidine-DNA glycosylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 160 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 16/167 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA-ATRGKKIIDVSRRAKY 59 MPELPEVE RR + ++ V+ I + + LR+ P G+++ V RR KY Sbjct: 1 MPELPEVETTRRGIAPHLEGAAVSGIVVRQPRLRWPVPRKSGVHWLNGQRLNSVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYND 118 LL+ S+++HLGMSGS + PQ H+H + NN+ + D Sbjct: 61 LLLNFAPG-SLLLHLGMSGSLRVLPNGTP-----PQRHDHFDLEFDNNSLLR-----LRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 PRRFG + T ++ L LG EP F+ YL HQ + S Sbjct: 110 PRRFGAVLWQPTGECHEL--LARLGLEPLREGFDGDYL-HQIGQSRS 153 >gi|311744402|ref|ZP_07718203.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] gi|311312207|gb|EFQ82123.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] Length = 286 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 52/305 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPE+PEV+ + +L V I L ++ D P A G + DV R K Sbjct: 1 MPEMPEVDALVAHLRERCVGAVVAGIELGSFSVLKTVDPPLDSFA---GLSVTDVRRHGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ ++++G L ++ HL +G + + I + N + R+ D Sbjct: 58 FIDLDVDG-LHLVFHLAKAGWLRWSD----------RFSPARIKMGNGPLALRVRLDTGD 106 Query: 119 PRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 GF DL E + + P + LGP+P + F+ + + Sbjct: 107 GPTAGF-DLTEAGTRKGLAVYAVRDVAEVPGVAALGPDPLADGFD----LRPLLARRMQV 161 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L +QKIVAGIGN Y E L A+LSP +L + D + L ++ VL Sbjct: 162 KRLLRDQKIVAGIGNAYSDEILHAARLSPFAIAENLDE------DQVAALAAAVRDVLSA 215 Query: 228 AIDAG----GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 A+ + L+D + V+G+TG+PC CG + + + S Y Sbjct: 216 AVSEAHGKPAAELKDDK---------RTRMRVHGRTGQPC-PVCGDTVAEVAFSDSSLQY 265 Query: 284 CTYCQ 288 C CQ Sbjct: 266 CPTCQ 270 >gi|226326882|ref|ZP_03802400.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] gi|225204719|gb|EEG87073.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] Length = 164 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 22/171 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 5 VPELPEVETSRRGIEPHLVGNVLHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 63 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+H+ + + + Y DPR Sbjct: 64 LVELNTGW-IIIHLGMSGSVRI----LLEEQPEEKHDHIDLVFRDGKVLR-----YTDPR 113 Query: 121 RFGFM----DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSN 166 RFG DL +++ L LGPEP + FNA YL Q +KKNS+ Sbjct: 114 RFGAWLWCEDLATSTV------LAHLGPEPLSDEFNAEYLYQQSKNKKNSH 158 >gi|242096492|ref|XP_002438736.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] gi|241916959|gb|EER90103.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] Length = 399 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 34/300 (11%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR L V + + + K + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDDKVVVAAAGRAAFERAMVGRTIVAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY----- 112 K L ++L+ GM+G+ I+ P+ N + + V + K+ Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGV----PVTNYKRSVVNSEEEWPSKYSKFFAELD 116 Query: 113 ---RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D RRF + L E PP+ LGP+ + +K +K Sbjct: 117 DGLEFSFTDKRRFARVRLFEDP--ETVPPISELGPDALFEPMSVDDFLDSLGRKKIGIKA 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L+++++ P++ +L + + + L++ IQE+ K Sbjct: 175 LLLDQSFISGIGNWIADEVLYQSRIHPLQIASNLPRESC---EALHRSIQEVVKYA---- 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +D + F + + + G+ G+ I I GR+T Y QK Sbjct: 228 ----------VEVDADMDRFPKEWLFHHRWGKKPGKVNGKKIEFITAGGRTTAYVPQLQK 277 >gi|254515713|ref|ZP_05127773.1| endonuclease VIII [gamma proteobacterium NOR5-3] gi|219675435|gb|EED31801.1| endonuclease VIII [gamma proteobacterium NOR5-3] Length = 274 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 37/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + V+ + T+ ++ F FP F G++++D+ R K Sbjct: 1 MPEGPEIRRAADRIADVLVDRTIEEVV-------FAFPELQRFGGLLTGQQVLDIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + +I H + G + I AK K P N SL +T + + Sbjct: 54 ALLTHFDNDYAIYSHNQLYGVWKI-----AKRGKMPATNR---SLRLALHTATHSALLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPE--PADNSFNAIYLTHQFHKKNSNLKNAL-LNQK 175 E + +P L TLGP+ A+ S+ I Q + +AL L+Q Sbjct: 106 ASDISVWAREELGM---HPFLATLGPDLLSANLSWQDISERLQMPRFAGRSLSALYLDQH 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG GN E L+ A L P R+ R L + L +E K+ + + GG + Sbjct: 163 FMAGSGNYLRSEILFCAGLHPRRRPRDLTRAQRG------ALARETLKLPRRSYETGGIT 216 Query: 236 LRDYVHIDGSI-----GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L V + S+ G+ + F V+G+ G PC CG I R R ++C CQ Sbjct: 217 L--PVRLAASLKKTVKGFERRRFFVFGRDGRPCY-QCGDTILRDSMGSRRIYWCPTCQ 271 >gi|68697730|emb|CAJ14058.1| hypothetical protein [Streptomyces viridochromogenes] Length = 190 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 20/206 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ + + D Sbjct: 61 LLAR-TGGPTLVLHFGMTGRLVCCHPGDAVEA----HDRVLFTLSGGRQLR-----FRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEP--ADNS-FNAIYLTHQFHKKNSNLKNALLNQKI 176 R+ + L LR GP+ D + F A+ + +LK AL +Q + Sbjct: 111 RKLQGLWLAHDDFDIDRL-LRRQGPDALTVDRAEFEAVLCA-----RRGSLKTALTDQSV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRS 202 +AG+GN+ E LWRA+L P R+TR Sbjct: 165 LAGLGNLLADEILWRARLRPDRRTRE 190 >gi|283457913|ref|YP_003362514.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133929|dbj|BAI64694.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 294 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 33/269 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ--- 95 +A G I K+L + E +L++ VHLG+ G++ E + A I P+ Sbjct: 36 AALLDGHTITGAYAHGKHLFVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIG 95 Query: 96 -------HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP--LRT----L 142 +T + R++ G+ DLV ++ P +RT L Sbjct: 96 EKEYAAGEEQPYAGPPEPKSTVRCRIVSE----HGWADLVGPTICRTLTPEEVRTVRSKL 151 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GP+P + + K + + L++Q ++G+GNI+ E+L+R ++ P+R +S Sbjct: 152 GPDPLNPDADPEQFYRAARKSSRPIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKS 211 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L L +L ++ + +L+ + G + D + + + +A VY Sbjct: 212 LSDEE------LERLWEDNKHLLVIGVRVGRIITTEPEDRPGVPETEAWPDHANYVYMHH 265 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GEPC CG IR AGR ++C CQ Sbjct: 266 GEPC-RRCGTTIRMEEIAGRKLYWCPGCQ 293 >gi|302754324|ref|XP_002960586.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] gi|300171525|gb|EFJ38125.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] Length = 268 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 27/242 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNM-----TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE RR + + K + D + FD A K+I+ R Sbjct: 1 MPELPEVEAARRAVELHCKGLICRASVADDTTVIEGMAPFDMQRRLVA----KRIVAAHR 56 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-------HVTISLTNNTN 108 + K L +EL+ SI GM+G+ ++ K +++ + + + L +T Sbjct: 57 KGKQLWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTG 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + + D RRF + L++ PP+ LGP+ + KK + +K Sbjct: 117 VE---MSFTDKRRFARVRLLQDP--RLSPPISELGPDAYTELPDETTFADSVAKKKTAIK 171 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AGIGN E L+++++ P + +L + +L I++V++ A Sbjct: 172 AVLLDQVFIAGIGNWIADEVLYQSRIHPEQPASTLTAID------CERLRGAIKEVVMTA 225 Query: 229 ID 230 +D Sbjct: 226 VD 227 >gi|297202801|ref|ZP_06920198.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713889|gb|EDY57923.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 284 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 34/274 (12%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 + + D L R +LR P + +A G++++DV+ R K+LL +EG L++ HL M GS Sbjct: 15 HTALADKVLTRSDLRV--PKYATADLTGRRVLDVTPRGKHLLTRIEGGLTLHSHLRMDGS 72 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + + + P H I NT + V Y R ++L+ T+ +++ + Sbjct: 73 WKV-YAENQRWTGGPTHQIRAIL----ANTDRTAVGY----RLPVLELLRTTDEHKA--V 121 Query: 140 RTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+ ++ L + L ALL+Q+ +AGIGN+Y E + +P Sbjct: 122 GHLGPDLLGPDWDPERALANLLRDPARPLGEALLDQRNLAGIGNVYKSELCFLLGATPWL 181 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 +L P D +L +K+L + RD + + G VYG+ Sbjct: 182 PVGAL------PADRAAQLPALAKKLL--------EANRDRP-VRSTTGRRGQDLFVYGR 226 Query: 259 TGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 PCL C +R Q R T++C CQ Sbjct: 227 APRPCL-RCRTSLRVADQGDGSRERPTYWCPTCQ 259 >gi|315506864|ref|YP_004085751.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|315413483|gb|ADU11600.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 286 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/305 (25%), Positives = 115/305 (37%), Gaps = 52/305 (17%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE + R + ++ V I + +D P +A G+ + R Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKT---YDPP---PSAVAGRAVTGAGR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L + + L ++VHL +G H A P P L RV Sbjct: 55 YGKFLDVRFDEGLHLVVHLARAGWL---HYREAFPAATP--------LRPGKGPIAVRVR 103 Query: 116 YNDPRRFGFMDLVETSLK-----------YQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 +D F DL E + Q P + LGP+ + + + Sbjct: 104 LDDGSGF---DLTEAGTQKKLAAYLVTDPAQVPGVAKLGPDALEADLPT--FAERLRSRR 158 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K L +Q ++AG+GN Y E L A+LSP T L D L L + V Sbjct: 159 GQVKGVLTDQSVLAGVGNAYSDEILHAARLSPFAITDRLTD------DQLAGLHAATRTV 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L DA+ R + G ++ V+ + G PC CG +R + A S Y Sbjct: 213 LGDAVR------RSMGQRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQY 265 Query: 284 CTYCQ 288 C CQ Sbjct: 266 CPTCQ 270 >gi|84497253|ref|ZP_00996075.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] gi|84382141|gb|EAP98023.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] Length = 284 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 17/253 (6%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G ++++ + K+L +E G+ + VHLG+ G+F I+ TS A + P V Sbjct: 42 AALLSGHEVLEATSWGKHLFVEFAGDRILWVHLGLIGTFTIDTTSYAGEV--PVVGQVRC 99 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIYLTH 158 + + R G M + + L LGP+P +D + Sbjct: 100 RFATSDHVADLR---------GPMVCDVVTPEKVDEILARLGPDPLRPSDVRSDPDLAWK 150 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYK 216 + + + + L++Q ++AG+GN+Y E L+R +++P R L + +D++ Sbjct: 151 RIQRSSKPIAELLMDQAVLAGVGNVYRSEVLFRLRVNPFRPGNKLQRKTWRAIWEDLVTL 210 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L + I I ++ + + VY + GE C CG I+ + Sbjct: 211 LPIGVATSKIVTIHEQVDAVAQALEAGEDVRMTTRDSYVYKRQGEAC-HVCGSKIKTQIM 269 Query: 277 AGRSTFYCTYCQK 289 AGR+ F+C CQ+ Sbjct: 270 AGRNLFWCGNCQR 282 >gi|226498176|ref|NP_001141023.1| hypothetical protein LOC100273102 [Zea mays] gi|194699240|gb|ACF83704.1| unknown [Zea mays] Length = 384 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 120/309 (38%), Gaps = 52/309 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR------------FDFPHHFSAATRGK 48 MPELPEVE RR L C+ R+ R F A G+ Sbjct: 1 MPELPEVEAARRALQA---------HCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGR 51 Query: 49 KIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 I+ RR K L ++L+ GM+G+ I+ P+ N + + V + Sbjct: 52 TIVAARRRGKNLWLQLDAPPFPSFQFGMAGAIYIKGI----PVTNYKRSVVNSEEEWPSK 107 Query: 109 TKKY--------RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 K+ + D RRF + L E PP+ LGP+ + Sbjct: 108 HSKFFAELDDGLEFSFTDKRRFARVRLFEDP--ETLPPISELGPDALFEPMSVDSFLDSL 165 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +K +K LL+Q ++GIGN E L+++++ P++ +L P++ L Q Sbjct: 166 GRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNL------PRESCEALHQS 219 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I++V+ A V +D + F + + + G+ G+ I I GR+ Sbjct: 220 IEEVVKYA-----------VEVDADMDRFPKEWLFHHRWGKKPGKVDGKKIEFITAGGRT 268 Query: 281 TFYCTYCQK 289 T Y QK Sbjct: 269 TAYVPQLQK 277 >gi|322434760|ref|YP_004216972.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] gi|321162487|gb|ADW68192.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] Length = 307 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 29/253 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + V R K+LLI G+L ++ H+ MSGS+ + T + N + ++L+ Sbjct: 44 GRTVDKVESRGKWLLIHFSGDLILVTHMLMSGSWHLYRTGEKWWMG---RNRMRVALS-- 98 Query: 107 TNTKKYR-VIYNDP-RRFGFMDLVETSLKYQYPPLRTLGPEPADNSF---NAIYLTHQFH 161 T+ ++ V +N P F +E S Q P LGP+ F + ++ Sbjct: 99 --TEGWQAVAFNVPIAEFHTARSLERS--SQVP---KLGPDVLAEGFTVEQGVARLREYG 151 Query: 162 KKNSNLKNA--LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 +++ + + A LLNQ+++AG+GN+Y E + A ++P R ++ DI+ Sbjct: 152 QQHPDAEIAVVLLNQRVLAGLGNVYKSEVAFAAGVNPFRAMSTITDQE---MDIMVDRSH 208 Query: 220 EIQKVLIDAIDAGGSSLRDYV--HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIV 275 + KV + +D G + Y + G ++ VYG+ G+ C CG ++ R+ Sbjct: 209 KWLKV--NVLDGAGDGIVTYSGNRRTTNSGNREDRLWVYGRQGQEC-RRCGALVQMRKQG 265 Query: 276 QAGRSTFYCTYCQ 288 + RST++C CQ Sbjct: 266 EQARSTYWCPACQ 278 >gi|149277931|ref|ZP_01884070.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] gi|149231129|gb|EDM36509.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] Length = 259 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 37/244 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRA 57 MPELP++E+ NL KN T+ D+ + +K + P A G ++ V R Sbjct: 1 MPELPDLEVFAANLEKRFKNKTLEKLDVQVSKK---LNVPEKELKDALEGHELKQVLREG 57 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-- 115 K L + G + +HL + G +SL + K+++I Sbjct: 58 KTLQLHFGGGNVLGLHLMLHGE---------------------LSLIEKDDDVKFKIIEF 96 Query: 116 -YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + RF D + + P + + P+ F+ Y +K +K L++Q Sbjct: 97 QFRGDNRFALTDFQKQATPTLNPEVSEV-PDALSEEFSFAYFQDLLSRKKIKIKQLLMDQ 155 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K+V GIGN Y E LW AK+SP ++++ P + +L I KVL D I A Sbjct: 156 KLVRGIGNTYADEILWHAKISPFSVSKAI------PTKEVKELYHSIGKVLRDEIIALTK 209 Query: 235 SLRD 238 ++ D Sbjct: 210 AISD 213 >gi|318078894|ref|ZP_07986226.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 210 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 79/187 (42%), Gaps = 30/187 (16%) Query: 105 NNTNTKKYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 T+K +Y +DPR P + LGP+P F+ Sbjct: 35 TEAGTQKRLAVYVVDDPR--------------TVPGIARLGPDPLAPGFDRAAFAELLRG 80 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + LK AL +Q +VAG+GN Y E L AKLSP + L + + +L + ++ Sbjct: 81 ERRQLKGALRDQSLVAGVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALR 134 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 L +A+ R GS+ ++ V+G+TGEPC CG IR + A S Sbjct: 135 TTLTEAV------ARSRGIAAGSLKAEKKSGLRVHGRTGEPC-PVCGDTIREVSFADSSL 187 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 188 QYCPTCQ 194 >gi|124003723|ref|ZP_01688571.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] gi|123990778|gb|EAY30245.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] Length = 294 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 102/251 (40%), Gaps = 35/251 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ R NL T+ +H A G+ + V R K L Sbjct: 1 MPELPDLQVFRSNLQKRFVGKTLQMFTVHNPKKLNTSEEKCKQALEGQWLKSVKRHGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E I VHL + G F+ + P + + L + + K I + Sbjct: 61 FFEFNNKEVIGVHLMLKGQFV----------ELPHYQPTNLILALHFDGGKGLAITDS-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 M L +L P P+ D FN YL + HK +K+ L++QKIV G Sbjct: 109 ----MSLTRITLN----PPSPQAPDALDLEFNIKYLLNTLHKNTKVPVKSFLMDQKIVRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL--------IDAIDA 231 IGN YV E LW AK+SP + P+ + +L + I++VL I D Sbjct: 161 IGNAYVDEILWEAKISPFSHCDQI------PESAVRELHRHIKQVLKNGETQIKISHPDI 214 Query: 232 GGSSLRDYVHI 242 +RD++ I Sbjct: 215 IAGEIRDFMKI 225 >gi|317491180|ref|ZP_07949616.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920727|gb|EFV42050.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 263 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 40/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L + +T++ F FP H+ G+KI D+ R K Sbjct: 1 MPEGPEIRRAADKLTDAVVGKPLTEVW-------FAFPQLKHYQPQLIGEKIEDIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I A N + + L T+ ++ Sbjct: 54 ALLTHFSNGLTMYSHNQLYGVWKI---VAAGDTPNTKRD-----LRVRLETEDQAILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 E + Q+P L+ +GP+ D A + + + LL+Q+ Sbjct: 106 ASDITIAPREEIA---QHPFLQRVGPDVLDLRLTAEQVKERLMLPAFRRRQFGGLLLDQR 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGG 233 +AG+GN E LW A+L+P +SL P+ + L + EI ++ + + G Sbjct: 163 FLAGLGNYLRVEILWDAELAPTHNAQSL-----RPEQLEHLSHALLEIPRL---SYNTRG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D H G++ FQ F V+ + GEPCL CG MI + + + R ++C CQ+ Sbjct: 215 TMDEDVHH--GAL--FQ--FKVFHRAGEPCL-RCGLMIEKTMISSRPFYWCPNCQR 263 >gi|152964122|ref|YP_001359906.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151358639|gb|ABS01642.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 273 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 120/304 (39%), Gaps = 48/304 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ R+ + T+ D+ R P A G+ + RR K Sbjct: 1 MPELPEVQSARQVVERGGLFRTIADVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGKS 60 Query: 60 LLIELEG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + G ++ +HLGMSG + A + + S N + YR Sbjct: 61 MWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRES-PNPVKEEWYRF 119 Query: 115 IYN----------DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + D RR G + L P + LGP+ + + + Sbjct: 120 TLDFEDGGQLRLFDKRRLGRVRL--------DPDVDALGPDA--ELVGREEFRERIGRGS 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + LK LL+Q +VAGIGN+ E LWRA+ SP++ L L +L +E++ Sbjct: 170 APLKARLLDQSVVAGIGNLLADEVLWRARASPLKPAGELRAEE------LDELRRELRAA 223 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + A+ GG VH G + + A G C CG + R GR+T++C Sbjct: 224 IRHAVRHGG------VHT-GEVVPHRTA-------GGHC-PRCGAEMVRATVGGRTTWWC 268 Query: 285 TYCQ 288 + Q Sbjct: 269 SAEQ 272 >gi|297521244|ref|ZP_06939630.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 138 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 75/152 (49%), Gaps = 15/152 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLS-DQPVLSVQRRAKYL 59 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+EL EG II+HLGMSGS I + + +H+HV + ++N + Y DP Sbjct: 60 LLELPEG--WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDP 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 RRFG + + L LGPEP + F Sbjct: 109 RRFGAWLWTKELEGHNV--LTHLGPEPLSDDF 138 >gi|256375288|ref|YP_003098948.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255919591|gb|ACU35102.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 267 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 30/257 (11%) Query: 41 FSA-ATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 F+A A G+ ++ K+LL + + VHLG+ G F +P+ V Sbjct: 32 FAAEAVDGRVLVKAEAHGKHLLHVYGPDAIVHVHLGLYGKFAEHEPPVTEPV-----GQV 86 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTH 158 + + N R P + L + LR LGP+P Sbjct: 87 RMRIVGERNWTDLR----GPAACEVLTLDGVAA------LRARLGPDPLRRDAKPAEALA 136 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + + L L++QK+VAGIGNIY E L+R L P++ Q + +++ + Sbjct: 137 RVRRSKQPLATLLMDQKVVAGIGNIYRAELLFRHGLDPMK------QGSAVDEELWAAMW 190 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIR 272 ++ ++ D + AG H+ G VY + G+PCL CG + Sbjct: 191 PDLVALMRDGVKAGRIDTVRPAHLPEVTGRAPREDRHGGEVYVYRRAGQPCLV-CGTPVA 249 Query: 273 RIVQAGRSTFYCTYCQK 289 V A R+ ++C CQ+ Sbjct: 250 HAVLAARNLYWCPTCQR 266 >gi|145597000|ref|YP_001161297.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] gi|145306337|gb|ABP56919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] Length = 286 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 115/301 (38%), Gaps = 44/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + N + +AA G+ ++ R K+L Sbjct: 1 MPELPEVEALTVYLRQRAVGRRVDRLEISAINALKTYDPAITAAA-GQPVVHAQRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLT---------NNTNTK 110 + L +L ++VHL +G E S P++ P V + T+ Sbjct: 60 DLVLGADLHLVVHLARAGWLHFREEFSSRTPLR-PGKGPVALRARLDDGSGFDLTEAGTQ 118 Query: 111 KYRVIY--NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K +Y DP P + LGP+ + + + + +K Sbjct: 119 KSLAVYLVTDP--------------ATVPGVARLGPDAL--AVDPATFADRLRSRKGQVK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L +Q ++AG+GN Y E L A+LSP T L L L + VL DA Sbjct: 163 GVLTDQTVLAGVGNAYSDEILHTARLSPFALTTRLTDEQ------LATLHAATRDVLGDA 216 Query: 229 IDAGGSSLRDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + R + G ++ V+ +TG PC CG +R + A S YC C Sbjct: 217 VS------RSVGQRAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQYCPGC 269 Query: 288 Q 288 Q Sbjct: 270 Q 270 >gi|86160345|ref|YP_467130.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776856|gb|ABC83693.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 320 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELP++E+ L + + I L L D P A G+++ V R+ K Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPP---LAEAEGRRVAAVRRQGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +++ L+G+L + +HL ++G + P K N T + Sbjct: 58 RVVLALDGDLFLALHLMIAGRLHWKDPGARLPGKA---GLAAFDFPNGTLV----LTEAG 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 +R + LV + L G EP A + ++N LK AL + + + Sbjct: 111 TKRRAALHLVRGAAALAA--LDRGGLEPLGADLAAFAAALR--RENHTLKRALTDPSLFS 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI----DAGGS 234 GIGN Y E L RA+LSP+ T L + +L++ ++VL +A GS Sbjct: 167 GIGNAYSDEILHRARLSPVALTSRLGDAE------VARLLEATREVLAGWTARLREAAGS 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPE------GVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|326800630|ref|YP_004318449.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] gi|326551394|gb|ADZ79779.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] Length = 258 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 35/285 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELP++E+ RNL ++K + I +H + P A + +++ V R K Sbjct: 1 MPELPDLEVFSRNLTRILKGKKLERIHVHEHK-KVSVPEKELKEALKKRELKKVYRLGKQ 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + N + +HL + G + + +NP++ +++ K + D Sbjct: 60 LYFDFGKNALLSLHLMLHGKLVYTNE------ENPKYALLSLKFE-----KAQTLFITDF 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + Q P RT + + +A L + +K L++Q I+ G Sbjct: 109 QKMAHI---------QLNPKRTASVDALSDDLHAERLYMILQNSKATIKTLLMDQHIIGG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW AK++P +S+ N PK+ + +L++ I++VL+ A D Sbjct: 160 IGNAYADEILWEAKIAP----QSIA--NKIPKEKVSELVESIKEVLLQAEKMILKEHPDI 213 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 I G I F V K +P G IR GR+T++ Sbjct: 214 --ISGEIRDFMKVHRVKAKE-DP----QGNPIRTEKIGGRTTYFT 251 >gi|269127507|ref|YP_003300877.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] gi|268312465|gb|ACY98839.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] Length = 259 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T +C R P + + RG+++ + R K+L Sbjct: 1 MPEGDTVWLAARRLHRALAGWALT-VCDVR------VPRYATTDLRGQRVREAVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++G LS+ VHL M G ++I A P+ P+ + + ++L N + + Y Sbjct: 54 LIRVDGGLSVHVHLKMDGRWLIRP---AGPV--PRDHRIRLALGNE---RHLALGY---- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAG 179 R G ++++ T+ + + LGP+ ++ + + + A+++Q ++AG Sbjct: 102 RLGVVEVLPTAAEECA--VGHLGPDLLGPDWDPQEAVRRLRARPERAIGEAVMDQSVLAG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + + P R + G L+ L+ ++L ++ + Sbjct: 160 IGNIYKSELCFLRGVHPWRP----VAEAGD----LHALVDLAHRLLE-------ANKNRH 204 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 H+ VYG+ G PC CG I + Q R TF+C CQ Sbjct: 205 GHVTTGDLRPGRTHWVYGRAGRPC-RRCGARIEQAEQGPPGWERLTFWCPGCQ 256 >gi|307329212|ref|ZP_07608377.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885111|gb|EFN16132.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 34/266 (12%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R +LR P +A G+++++V R K+LL +EG L++ HL M GS+ + + Sbjct: 52 LTRSDLRV--PRLATADLTGRRVLEVVPRGKHLLTRVEGGLTLHSHLRMDGSWQV-YGPG 108 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE-P 146 + P H I T YR+ + R G D V L LGP+ Sbjct: 109 ERWRGGPHHQIRAILATAAHTAVGYRLPVLELLRTGDEDKVVGHLGPDL-----LGPDWD 163 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 D + + + L ALL+Q+ +AGIGN+Y E + ++SP I Sbjct: 164 PDEALRRL-----LADPSRPLGEALLDQRNLAGIGNVYKSELCFVLRVSPWLP----IGE 214 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 +P+ +L+ +K+L ++ + + VYG+ G PCL Sbjct: 215 VSSPE----RLVAHAKKLLE-------ANRNRRARVTTAEPRPDRRLWVYGRPGRPCL-R 262 Query: 267 CGQMIRRIVQ--AG--RSTFYCTYCQ 288 CG +R Q AG RSTF+C CQ Sbjct: 263 CGTPVRAADQGRAGQERSTFWCPSCQ 288 >gi|111225082|ref|YP_715876.1| endonuclease VIII [Frankia alni ACN14a] gi|111152614|emb|CAJ64355.1| Endonuclease VIII [Frankia alni ACN14a] Length = 301 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 41/266 (15%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F PH +A G++II V+ R K+LL +G LS+ H M GS+ + P Sbjct: 28 FRVPHLATADLSGQRIIGVAARGKHLLTRFDGGLSLHTHFRMEGSWHLYRPGV--PWSGG 85 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 + + L T ++ V Y R ++L+ TS + + LGP+ ++ Sbjct: 86 PAWQIRVVL---TTAEQVAVGY----RLAIVELLATSREQDA--VGHLGPDVLGPDWDLD 136 Query: 155 YLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KD 212 + + ALL+Q+I+AG+GNI+ EA + A +SP TP D Sbjct: 137 VVVAALRAVPQRQIGAALLDQRIIAGLGNIWRTEACFVAGVSPW-----------TPVGD 185 Query: 213 I--LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC------- 263 + L L++ Q ++ G + GS + + VYG+ G PC Sbjct: 186 VPDLPGLVRRAQAMIRTGAHGG------HQVTTGSTRPGEEHW-VYGRAGRPCRRCGSRI 238 Query: 264 -LSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G++ RI + R T +C CQ Sbjct: 239 LTADQGRLPGRIDEESRRTTWCPRCQ 264 >gi|269218010|ref|ZP_06161864.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212945|gb|EEZ79285.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] Length = 355 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 37/250 (14%) Query: 65 EGNLSIIVHLGMSGS--FIIEHTSC--AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +G L + +HLG+ G F E + +++ HN V + + T + R+ N Sbjct: 118 DGPLWLHIHLGLYGRWHFTGEGSDAIVGAGVRSGNHNAVNVGAGS---TVRLRLAAN--- 171 Query: 121 RFGF-MDLVETSL--KYQYPPLRT----LGPEPADNS-FNAIYLTHQFHKKNSNLKNALL 172 GF DL S P +R LGP+P N + ++ S + +L Sbjct: 172 --GFTADLTGPSRCEILDGPGVRAAVSKLGPDPVRNEPGDRERFVEAVRRRRSPVGQLVL 229 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI--- 229 +Q I AG GNIY + L+R +SP+R + K + L++ +Q + D + Sbjct: 230 DQSIAAGPGNIYRADCLFRVGISPLRPGNKVSAER--LKALWDDLVETMQADVPDGVIRT 287 Query: 230 ----------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 +A G+ D DG Q F+VY +TG PCL CG + AGR Sbjct: 288 VPESLRPEPAEASGAKNPDAEGADGDDPEAQR-FAVYHRTGRPCL-RCGTPVAEKEMAGR 345 Query: 280 STFYCTYCQK 289 F+C CQ+ Sbjct: 346 RLFWCPSCQR 355 >gi|226360505|ref|YP_002778283.1| DNA glycosylase [Rhodococcus opacus B4] gi|226238990|dbj|BAH49338.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 265 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 45/260 (17%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K+L E L + VHLG+ G+F T A P++ P Sbjct: 36 AALVDGRVLVKSEAWGKHLWHHYESGLVVHVHLGLYGAF----TEAAVPMEPP------- 84 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-----LGPEPADNSFNAIYL 156 + R++ + FG T+ + +PP LGP+P + Sbjct: 85 -----VGQVRMRMVGAE---FGTDLRGPTACEVLHPPQVAAIEARLGPDPLRKDADPDKA 136 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + + L++Q ++AG+GN+Y E L+R + P R R L ++ D L+ Sbjct: 137 WKRISASKTPIGALLMDQAVIAGVGNVYRAEVLFRHGIDPARPGRGLSRDE---WDALWA 193 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHI------DGSIGYFQNAFS--VYGKTGEPCLSNCG 268 + + KV + R +H+ G Y ++ VY + G PC CG Sbjct: 194 DLVALMKVGVR---------RGRMHVVRPEDDHGDPAYAKDRPRTYVYRRAGSPC-RICG 243 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 + V GR+ F+C CQ Sbjct: 244 TPVAHAVMKGRNLFWCPSCQ 263 >gi|288922642|ref|ZP_06416818.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] gi|288346000|gb|EFC80353.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] Length = 317 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 41/278 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPE V + R L ++ + LR DF P +A RG+++++V R K Sbjct: 1 MPEGDTVWLTARRLDAALRGQPL---------LRSDFRVPSLATADLRGREVLEVCARGK 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ ++G L++ HL M GS+ + + ++ P + +T YR+ Sbjct: 52 HLLLRVDGGLTLHTHLRMEGSWHL-YRPGSRWAGGPAWQIRVVLVTGEQVAVGYRLP--- 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPE--PADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +DL+ T+ + + + LGP+ AD + + + + ALL+Q++ Sbjct: 108 -----VVDLLPTASEDRV--VGHLGPDVLGADWDLDRA-VANLLADPAREIGVALLDQRL 159 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNI+ EA + A +SP G +D L L++ Q ++ A GG + Sbjct: 160 LAGLGNIWRTEACFLAGVSPWTPV-------GEVRD-LPGLVRRAQ-AMVRAGARGGHQV 210 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 GS + + VYG+ G PC CG ++RR+ Sbjct: 211 -----TTGSARPGEQHW-VYGRAGRPC-RRCGTLVRRL 241 >gi|329939941|ref|ZP_08289223.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329300767|gb|EGG44663.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 275 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 34/266 (12%) Query: 30 RKNLRFDF--PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 R+ RFD P ++ G ++DV+ R K+LL +EG ++ HL M G++ + + Sbjct: 21 RRLTRFDLRVPRFATSDLTGHTVLDVTPRGKHLLTRIEGGYTLHSHLRMDGAWKL-YAPG 79 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P H I T YR+ ++L+ T + + + LGP+ Sbjct: 80 KRWTGGPAHQIRAILGTEERTAVGYRLP--------VLELLRTEEESRA--VGHLGPDLL 129 Query: 148 DNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ L + + L ALL+Q+ +AGIGN++ E + + +P L Sbjct: 130 GPDWDPDTALANLLREPTRPLGEALLDQRNLAGIGNVFKSELCFLLRATPWLPLGEL--- 186 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 P L L +KVL + R+ + + G + VYG+ G PCL Sbjct: 187 ---PPGHLAALPALARKVL--------EANRERP-VRNTTGRREQPLFVYGRAGRPCL-R 233 Query: 267 CGQMIRRIVQAG----RSTFYCTYCQ 288 CG IR Q R T++C CQ Sbjct: 234 CGTRIRLADQGDGSRERPTYWCPVCQ 259 >gi|94967411|ref|YP_589459.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Candidatus Koribacter versatilis Ellin345] gi|94549461|gb|ABF39385.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 275 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 23/249 (9%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ ++DV R K++L+ G+L ++ H+ MSGS+ I + + +++ + T++ Sbjct: 44 GRTVVDVEARGKWMLMHFSGDLILLTHMLMSGSWHIYRP--GEQWQRSRNDMRVVIETSD 101 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS- 165 +RV + E SLK + L LG + F+ + Sbjct: 102 ILAVAFRVPVAEFH-------TEESLKRR-ARLNQLGDDLLGAEFDIPASVERLRAHGDL 153 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 L + LL+Q ++AG GN++ E + +L P RK SL + L ++ + ++++ Sbjct: 154 ELGDTLLHQSVLAGPGNVFKSEICFACRLDPFRKISSLSEEE------LLRVATKARELM 207 Query: 226 IDAI-DAGGSSLRDYVHIDGSIGYFQ--NAFSVYGKTGEPCLSNCGQMI--RRIVQAGRS 280 + D G + Y + G VYG+ G PC CG I +R R Sbjct: 208 TSNVSDTSGDKIVTYTGFRRTTGRSDPYERLWVYGRAGLPC-RRCGTRIEVKRQGAQARK 266 Query: 281 TFYCTYCQK 289 T++C CQ+ Sbjct: 267 TYFCPECQR 275 >gi|325526891|gb|EGD04365.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 65 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L DAI+ GGS+LRD+V +G GYFQ VY + G PC CG IR+IVQ RST++C Sbjct: 2 LADAIERGGSTLRDFVGSNGESGYFQLDCFVYDRAGAPC-RVCGTPIRQIVQGQRSTYFC 60 Query: 285 TYCQK 289 CQ+ Sbjct: 61 PTCQR 65 >gi|302542087|ref|ZP_07294429.1| endonuclease VIII [Streptomyces hygroscopicus ATCC 53653] gi|302459705|gb|EFL22798.1| endonuclease VIII [Streptomyces himastatinicus ATCC 53653] Length = 273 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 32/247 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+++++V R K+LL +EG L++ HL M G++++ + + PQH + T Sbjct: 44 GRRVLEVVARGKHLLTRVEGGLTLHSHLRMDGAWLV-YGHGERWRGGPQHQIRAVLATAE 102 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNS 165 YR+ ++L+ T+ + + + LGP+ ++ L + Sbjct: 103 RTAVGYRLP--------VLELLRTADEDRA--VGHLGPDLLGPDWDPDEALGRLLADPSR 152 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + ALL+Q+ +AGIGN+Y CE + ++ P I +P+ ++ + K L Sbjct: 153 PVGEALLDQRNLAGIGNVYKCELCFVLRIPPWLP----IGRVPSPERLVA-----VAKRL 203 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ--AG--RST 281 ++A + + + VYG+ G PCL CG +R Q AG R+T Sbjct: 204 LEA------NRTRRARVTTAHARPDRRLWVYGRAGRPCL-RCGTPVRAADQGRAGQERTT 256 Query: 282 FYCTYCQ 288 F+C CQ Sbjct: 257 FWCPVCQ 263 >gi|146545|gb|AAA03747.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] gi|146558|gb|AAA24045.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 89 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L + I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I Sbjct: 18 LARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKH 76 Query: 277 AGRSTFYCTYCQK 289 A R+TFYC CQK Sbjct: 77 AQRATFYCRQCQK 89 >gi|18762512|gb|AAL78080.1| Fpg [Yersinia enterocolitica] Length = 90 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L + I+ VL +I+ GG++LRD++ DG GYF VYG+ GEPC + CG I Sbjct: 19 LAKTIKAVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRAGEPCRT-CGTPIESAKH 77 Query: 277 AGRSTFYCTYCQK 289 RSTF+C CQ+ Sbjct: 78 GQRSTFFCRRCQR 90 >gi|297196039|ref|ZP_06913437.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153040|gb|EFH32113.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] Length = 204 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 16/205 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELP+VE R L + + + +H + A +G++ + +R K+ Sbjct: 1 MPELPDVEGFREVLDSCARGKRIERVEVHDAGVLHGVTVARLGRALQGRRFAEPARHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYND 118 LL +G ++++H GM+G + C + P H+ V ++L + + D Sbjct: 61 LLARTDGP-TLMMHFGMTGQLV-----CCRAGDPPDPHDRVVLALGREE------LRFRD 108 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+ + L E L GP+ S + ++ +K AL +Q ++A Sbjct: 109 QRKLQGLWLAEDPDADVARILHGQGPDAL--SLDRAAFKDLLSRRRGRVKAALTDQSVLA 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSL 203 G+GN+ E LWRA L P R+ L Sbjct: 167 GLGNLLADEILWRAGLRPTRRADRL 191 >gi|256784815|ref|ZP_05523246.1| DNA glycosylase [Streptomyces lividans TK24] gi|289768704|ref|ZP_06528082.1| DNA glycosylase [Streptomyces lividans TK24] gi|289698903|gb|EFD66332.1| DNA glycosylase [Streptomyces lividans TK24] Length = 276 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 32/259 (12%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P + + G+ ++DV+ R K+LL +EG L++ HL M GS+ + + P Sbjct: 28 FRVPRYATVDLTGRTVLDVTPRGKHLLTRVEGGLTVHSHLRMDGSWKV-FAPGQRWSGGP 86 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H I T + YR+ +D++ T+ + + + LGP+ ++ Sbjct: 87 AHQIRVILGTADRTAVGYRLP--------VLDILRTAEEQRA--VGHLGPDLLGPDWDPE 136 Query: 155 YLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 L ALL+Q+ +AGIGN+Y E + ++P L P D Sbjct: 137 RALDNLRADPPRALGEALLDQRNLAGIGNVYKSELCFLLGVTPWLPVGEL------PADR 190 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 +L +K+L + RD+ + + G VYG+ PCL CG +R Sbjct: 191 AARLPTLAKKLL--------EANRDH-PVRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRV 240 Query: 274 IVQAG----RSTFYCTYCQ 288 Q R T++C CQ Sbjct: 241 ADQGDGSRERPTYWCPTCQ 259 >gi|320588680|gb|EFX01148.1| formamidopyrimidine-DNA glycosylase [Grosmannia clavigera kw1407] Length = 365 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 24/218 (11%) Query: 1 MPELPE----VEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPE+ E V +R++L+ + K + D + K F+A+ GKK++ Sbjct: 1 MPEIAEAARIVHFLRKHLVGKQIKKAAAIDDSNVFGKAGTTG--ATFAASVLGKKVLSAG 58 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA--------KP----IKNPQHNHVTIS 102 + KY I L+ ++H GM+G I+ A KP + P+ + Sbjct: 59 SQGKYFWIVLDSQPHPVMHFGMTGWIHIKGMRTAYTNYYNKMKPGDADLWPPRFWKFHLQ 118 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTH 158 + K + + DPRRFG + L++ Q+ PL GP+P ++ F ++ Sbjct: 119 AEADGAADKVELAFTDPRRFGRVRLIDCPGDRIRQFSPLVENGPDPVVDADIFTESFVRD 178 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 +++ +K LL+Q ++GIGN E L++A+L P Sbjct: 179 TMQRRHVPIKALLLDQAFISGIGNWVGDEVLFQARLHP 216 >gi|283479110|emb|CAY75026.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae DSM 12163] Length = 264 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 39/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K+ +TD+ F FP + G++II + R K Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVW-------FSFPTLQSYQQMLVGERIISIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I + S +P ++ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRIIN-SGVEPAQSKRVLRVRLAAADKT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + L++ +P L+ GP+ D + A L+ +F ++ LL+ Sbjct: 108 SD----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQ--FSGLLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+A+L+ K +L + D L + + + ++ + G Sbjct: 162 QAFLAGLGNYLRIEILWQAQLAAQHKAETL---SDKQLDALAEALLSVPRL---SYHTRG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 216 QA--DENHHHGAL----FSFKVFHRAGKAC-QRCGETIVKTMLSSRPFYWCPGCQK 264 >gi|258644410|dbj|BAI39671.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Indica Group] Length = 409 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/307 (26%), Positives = 130/307 (42%), Gaps = 54/307 (17%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ +K + +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSK------YKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHK 162 + D RRF F+D E PP+ LGP D F ++L + Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPEA-----VPPISELGP---DALFEPLHLDDFVESLSR 166 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K + +K LL+Q V+GIGN E L++A++ P+ +T S+I K+ L Q I Sbjct: 167 KKAPIKALLLDQSFVSGIGNWIADEVLYQARIHPM-QTASMIS-----KEKCKALHQCII 220 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +V+ +++ G +S + Y +N + + + +P G+ I I GR++ Sbjct: 221 EVIEKSLEVGCNSSQ----------YPEN-WIFHSREKKP-----GKKIDFITVGGRTSA 264 Query: 283 YCTYCQK 289 Y QK Sbjct: 265 YVPELQK 271 >gi|302869641|ref|YP_003838278.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] gi|302572500|gb|ADL48702.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] Length = 269 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 103/245 (42%), Gaps = 41/245 (16%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+LL G L++ VHLG+ G F P+ L ++ ++ + Sbjct: 51 GKHLLHHYAGELTLHVHLGLYGKFADGPGEPPAPVGQ---------LRLRLHSDRHWLEL 101 Query: 117 NDPRRFGFMDLVETSLKYQYPP----LRT-LGPEP--ADNSFNAIYLTHQFHKKNSNLKN 169 P T+ + PP LR LGP+P AD + Y + + + L Sbjct: 102 RGP----------TACELLTPPEVAALRDRLGPDPLRADADPDRAYA--RIRRSPTPLAA 149 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP--KDILYKLIQEIQKVLID 227 LL+Q +VAG G I+V EAL+RA L P+ R L D++ + + +++ ID Sbjct: 150 LLLDQSVVAGTGLIFVTEALFRAGLPPLLPGRELTPAGWAELWADLVMLMTRAVERGRID 209 Query: 228 AI-DAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + DA D + G + VY + G PC CG + R AGR+ ++ Sbjct: 210 TVRDA------DLPEVTGRAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYW 262 Query: 284 CTYCQ 288 C CQ Sbjct: 263 CPTCQ 267 >gi|320105899|ref|YP_004181489.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] gi|319924420|gb|ADV81495.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] Length = 301 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 33/255 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ I V R K+LLI G+L ++ H+ MSGS+ I T + +P+ Sbjct: 44 GRVIEKVEARGKWLLIHFSGDLILVTHMLMSGSWHIYRT--GEKWWSPRSAMRVRVAVEG 101 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK--- 163 V +N P + T+ + + LGP+ S++ K+ Sbjct: 102 VEA----VAFNVP----VAEFHTTASLKRDAMVEKLGPDVLSASYSGDVGLVALQKRMVS 153 Query: 164 --NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQE 220 + + N LLNQ+++AG+GN+Y E + A++ P R R+L + D+ + +Q Sbjct: 154 HPDDEIANVLLNQRVLAGLGNVYKSEVCFAARVHPFRAMRTLTVDEMQQMADVSQRYMQA 213 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA-----FSVYGKTGEPCLSNCGQMI--RR 273 + +D G + Y G+ ++A VYG+ G C CG ++ R+ Sbjct: 214 ------NVLDGAGDGIVTY---SGNRRTTRSANAADRLWVYGRRGLEC-RRCGGIVEMRK 263 Query: 274 IVQAGRSTFYCTYCQ 288 RST++C CQ Sbjct: 264 QGVGARSTYWCPDCQ 278 >gi|312171755|emb|CBX80013.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 39/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + L +K +TD+ F FP + G++II + R K Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVW-------FAFPALQTYQQMLVGERIISIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I + S A+P ++ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRIIN-SGAEPAQSKRVLRVRLAAADQT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + L++ +P L+ GP+ D + A L+ +F ++ LL+ Sbjct: 108 SD----IQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQ--FSGLLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+A L+ K +L + + +D Sbjct: 162 QAFLAGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKVDEN- 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 221 -------HHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|332664166|ref|YP_004446954.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] gi|332332980|gb|AEE50081.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] Length = 258 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 19/223 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV +R + + +H K +R F+ G+ RR KY Sbjct: 1 MPELPEVNTFQRYFDESALQQRIARVDVHDDKIIRNMDGASFAERLHGRTFTGSYRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +L+ +++H GM+G PI P+H N +++ ++DP Sbjct: 61 LFAQLDNGHHVLLHFGMTGDI----KYYEDPIDKPKHERFAFVFDNG-----FQLGFDDP 111 Query: 120 RRFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+F + +E Y PL ++ F + K LK LL Q+ +A Sbjct: 112 RKFARILYLEDLQAYIDSLPLGEDALRISEADFLQL-----ISNKKGQLKAFLLQQQNLA 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 G+GN+Y E ++ ++ P + SL + K +L+ +Q+I Sbjct: 167 GVGNLYADELCYQTRIHPAARIESLSLED---KKLLFTTLQKI 206 >gi|118465909|ref|YP_880937.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium 104] gi|254774526|ref|ZP_05216042.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium subsp. avium ATCC 25291] gi|118167196|gb|ABK68093.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium avium 104] Length = 268 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVTSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + ++ R P Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGASHGTDLR----GPTVCE 112 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +D + S L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 113 VIDEGQVSDV-----LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + D + + + KV + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAE---FDAAWTDLVALMKV---GLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|255947552|ref|XP_002564543.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591560|emb|CAP97795.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] Length = 370 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 13/216 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL E+ I + + T++ + ++ F F A +GKKI+ ++ Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSGAEFQKAMQGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I+ KP L + K Sbjct: 61 GKYFWMTMSSPPHAVMHFGMAGWLKIKDADTYYYRSDKPADQEWPPKYWKFLLETNDESK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + PL+ GP+P ++ + +LT + KK + Sbjct: 121 TEAAFVDARRLGRIRLVDCPADEIRDHTPLKENGPDPVTDKDTVDEAWLTEKLGKKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 K LL+Q ++GIGN E L+ AK+ P + + +L Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTL 216 >gi|292487647|ref|YP_003530520.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] gi|292898884|ref|YP_003538253.1| endonuclease VIII [Erwinia amylovora ATCC 49946] gi|291198732|emb|CBJ45841.1| endonuclease VIII (DNA N-glycosylase/AP lyase) [Erwinia amylovora ATCC 49946] gi|291553067|emb|CBA20112.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] Length = 264 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 39/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + L +K +TD+ F FP + G++II + R K Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVW-------FAFPALQTYQQMLVGERIISIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I + S A+P ++ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRIIN-SGAEPAESKRVLRVRLAAADQT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + L++ +P L+ GP+ D + A L+ +F ++ LL+ Sbjct: 108 SD----IQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQ--FSGLLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+A L+ K +L + + +D Sbjct: 162 QAFLAGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKVDEN- 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 221 -------HHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|213864695|ref|ZP_03386814.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 69 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+ Sbjct: 2 IKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRA 60 Query: 281 TFYCTYCQK 289 TFYC CQK Sbjct: 61 TFYCRQCQK 69 >gi|111018385|ref|YP_701357.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110817915|gb|ABG93199.1| probable DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 265 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 45/260 (17%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K+L E L + VHLG+ G+F T A P++ P Sbjct: 36 AALVDGRVLVKSEAWGKHLWHHYESGLVVHVHLGLYGAF----TESAVPMEPP------- 84 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-----LGPEPADNSFNAIYL 156 + R++ + FG T+ + +PP LGP+P + Sbjct: 85 -----VGQVRMRMVGAE---FGTDLRGPTACEVLHPPQVAAIEARLGPDPLRKDADPDKA 136 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + + L++Q ++AGIGN+Y E L+R ++P R R+L ++ D L+ Sbjct: 137 WKRISASKTPIGALLMDQAVIAGIGNVYRAEVLFRHGINPDRPGRALSRDE---WDALWA 193 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHI------DGSIGYFQNAFS--VYGKTGEPCLSNCG 268 + + KV + R +H+ G Y ++ VY + G PC CG Sbjct: 194 DLVALMKVGVR---------RGKMHVVRPEDDHGDPAYAKDRPRTYVYRRAGSPC-RICG 243 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 + V GR+ F+C CQ Sbjct: 244 TPVTHSVMKGRNLFWCPSCQ 263 >gi|326499279|dbj|BAK06130.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 375 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 23/233 (9%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEAARLALEEHCVGKRILRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ +K + +S T +K ++ Sbjct: 61 NLWLVLDSPPYPSFQFGMAGAIYIKGVELSK------YKRSAVSPTEEWPSKYSKLFVEL 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L++ PP+ LGP+ F +KN+ +K Sbjct: 115 DDGLEFSFTDKRRFAKIRLLDNP--EAVPPISELGPDALCEPMQLDEFVQSFGRKNAPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + LL+Q ++GIGN E L++A++ P++ + + + L++ I+E+ Sbjct: 173 SLLLDQSFMSGIGNWMADEVLYQARIHPMQTSSKISKEKCK---ALHRCIKEV 222 >gi|284047240|ref|YP_003397580.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] gi|283951461|gb|ADB54205.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] Length = 260 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 40/263 (15%) Query: 37 FPHHFSAATR------GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 P AA R G+++ V K+L + EG+L++ HL M+G++ + Sbjct: 28 MPQRRHAADRWPQRLAGRRVRSVDPYGKHLFLRFEGDLTLHSHLRMTGAWAVYPDGARWR 87 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 + V + V+ D M T Q LR LGP+ + Sbjct: 88 RAPRRAWLVL-------RARGSEVVEFDGPVLELMTESRTRFDQQ---LRALGPDLLADD 137 Query: 151 FNAIYLTHQFHKKNS--NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 F+ + + + +ALL+Q+IVAGIGNI+ E W A++ P R R + Sbjct: 138 FDPARFLRRLRADDPTRGIGDALLDQRIVAGIGNIWKAEGCWGAQIDPWRPLRDVTDAEA 197 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +++ + ++ A A + D H VY + G PC CG Sbjct: 198 V------AIVENARPRMLAAAAAPRGAGGDDRH-------------VYRRGGMPC-PRCG 237 Query: 269 QMIRRIVQAG--RSTFYCTYCQK 289 +I Q R+T++C CQ+ Sbjct: 238 TVIASRGQGDDNRTTWWCPGCQR 260 >gi|256425446|ref|YP_003126099.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] gi|256040354|gb|ACU63898.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] Length = 259 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 81/204 (39%), Gaps = 33/204 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ NL + + I L D P F A G+ + V R K L Sbjct: 1 MPELPDLQVFSHNLDKALSGKKLKVIKLENTKKAKDTPAAFKKALEGETLESVYREGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + +HL + G + E + K H I+L ++ D Sbjct: 61 RFRFKNEAVLGMHLMLHGKLYYFEEENTNK--------HTVIAL-----------LFEDG 101 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPA------DNSFNAIYLTHQFHKKNSNLKNALLN 173 + D +Q + +L PE A F +L Q KK + +K LL+ Sbjct: 102 KGLALTD-------FQGAAVPSLNPEAAAAPDALSKEFTLTFLKEQLAKKKTAVKKILLD 154 Query: 174 QKIVAGIGNIYVCEALWRAKLSPI 197 Q I+ GIGN Y E LW A +SP Sbjct: 155 QHIIRGIGNAYADEILWEAGISPF 178 >gi|145642430|ref|ZP_01797985.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145272868|gb|EDK12759.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 110 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 7/109 (6%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H+H+ I + N V YNDPRRFG + T ++P LGPEP F++ Sbjct: 9 KHDHLDIVVNNGK-----VVRYNDPRRFGAW--LWTEKLNEFPLFLKLGPEPLSEEFDSD 61 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 YL + KK + LK L++ +V G+GNIY E L+ L P +K + + Sbjct: 62 YLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKKQQGV 110 >gi|313836704|gb|EFS74418.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314929889|gb|EFS93720.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972317|gb|EFT16414.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907746|gb|EGG27510.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium sp. P08] Length = 272 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 13/155 (8%) Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 T+GP+P + + + + + + + LL+QK+ AG+GNIY E L+R ++ P+ Sbjct: 122 TIGPDPIRDDADPDIAWDKVRRSSRRISDLLLDQKVAAGVGNIYRAEVLFRHRIDPVTPG 181 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ------NAFS 254 + + + + ++ ++ ++AG H ++G Sbjct: 182 KQIFHST------WLAMWDDLVMLMRAGVEAGRIDTVQPEHTPEAMGRLPRVDRHGGEVY 235 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G+PCL C +R I Q GR F+C CQ+ Sbjct: 236 VYRREGQPCLV-CNTPVRMIAQGGRHLFWCPQCQR 269 >gi|240172877|ref|ZP_04751536.1| hypothetical protein MkanA1_26427 [Mycobacterium kansasii ATCC 12478] Length = 287 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 55/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E + +L + + D+ FD P +A G + R K Sbjct: 1 MPELPEIEALVDHLRRHAVGLPIGRVDVAALSVLKTFDPP---VSALHGHTVTAADRWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTIS---------LTNN 106 YL + + L +I HL +G A P+ K P V + LT Sbjct: 58 YLGLRAD-PLWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGIPGEAPGFDLTEA 116 Query: 107 TNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K+ V + +DP+ P + LGP+ + S L Sbjct: 117 GTQKRLAVWLVDDPK--------------HVPGIAALGPDALELSTE--DLAGLLAGNTG 160 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K + +QK++AGIGN Y E L AK+SP L L L + VL Sbjct: 161 RIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSAGQ------LATLHDAMVSVL 214 Query: 226 IDA----IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 DA + G + L+ G ++ V+ +TG PC CG +R + A +S Sbjct: 215 SDAVHRSVGQGAAMLK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSF 264 Query: 282 FYCTYCQ 288 YC CQ Sbjct: 265 QYCPRCQ 271 >gi|33322761|gb|AAQ07115.1|AF496427_1 formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. lactis] Length = 101 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%) Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 YV E LW+++++P+ L KD + L I + + +A GG+++ +++ + Sbjct: 1 YVDEVLWQSQINPLTPANELT------KDQVKCLHSAINETIEEATKYGGTTVHSFLNAE 54 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 55 GESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 99 >gi|115475806|ref|NP_001061499.1| Os08g0304900 [Oryza sativa Japonica Group] gi|50508157|dbj|BAD30940.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|50508168|dbj|BAD30974.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|113623468|dbj|BAF23413.1| Os08g0304900 [Oryza sativa Japonica Group] gi|215693253|dbj|BAG88635.1| unnamed protein product [Oryza sativa Japonica Group] Length = 409 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/307 (26%), Positives = 130/307 (42%), Gaps = 54/307 (17%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ +K + +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSK------YKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHK 162 + D RRF F+D E PP+ LGP D F ++L + Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPEA-----VPPISELGP---DALFEPLHLDDFVESLSR 166 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K + +K LL+Q ++GIGN E L++A++ P+ +T S+I K+ L Q I Sbjct: 167 KKAPIKALLLDQSFISGIGNWIADEVLYQARIHPM-QTASMIS-----KEKCKALHQCII 220 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +V+ +++ G +S + Y +N + + + +P G+ I I GR++ Sbjct: 221 EVIEKSLEVGCNSSQ----------YPEN-WIFHSREKKP-----GKKIDFITVGGRTSA 264 Query: 283 YCTYCQK 289 Y QK Sbjct: 265 YVPELQK 271 >gi|41408382|ref|NP_961218.1| hypothetical protein MAP2284c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396738|gb|AAS04601.1| hypothetical protein MAP_2284c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 268 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 114/288 (39%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVSSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + + R P Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGAGHGTDLR----GPTVCE 112 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +D + S L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 113 VIDEGQVSDV-----LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + D + + + KV + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAE---FDAAWTDLVALMKV---GLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|323359501|ref|YP_004225897.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323275872|dbj|BAJ76017.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 274 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/291 (24%), Positives = 113/291 (38%), Gaps = 27/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PEVE + L + TV ++ L + G+++ +R K+L Sbjct: 1 MPEAPEVEALTLFLRERLGGHTVREVDLLEGRALKTRARPLTELI-GRRVTGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMS---GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++LEG VHLG+ + + + +P + L N + Sbjct: 60 DLDLEG-----VHLGIGFGRAGWATWRDTGEADVDSPAPEIARVVLDNGI------LGIT 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D + + L P + LGP+ D ++ L + LK L Q+ + Sbjct: 109 DAGEWLSVQLHVVDAPQDVPAVAKLGPDAVDPGYSREMLAEALGGRRKQLKALLQEQETL 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L+ A+LSP SL +++ + +L + L A+ A R Sbjct: 169 AGIGNAYSDEILYAARLSPTAHASSLSEDD------VTRLHLALHDTLTAAVIA-----R 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V I + V+G+ GEPC G +I I + +C CQ Sbjct: 218 RGVPIAEQKAAKVASMRVHGRAGEPCPEGDG-VIEDIPGTKGAGQWCPSCQ 267 >gi|21224106|ref|NP_629885.1| DNA glycosylase [Streptomyces coelicolor A3(2)] gi|7531104|sp|O86820|Y5760_STRCO RecName: Full=Putative DNA glycosylase SCO5760; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase SCO5760; Short=Putative AP lyase SCO5760 gi|3294248|emb|CAA19861.1| DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 276 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 32/259 (12%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P + + G+ ++DV+ R K+LL +EG L++ HL M GS+ + + P Sbjct: 28 FRVPRYATVDLTGRTVLDVTPRGKHLLTRVEGGLTVHSHLRMDGSWKV-FAPGQRWSGGP 86 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H I T + YR+ +D++ T+ + + + LGP+ ++ Sbjct: 87 AHQIRVILGTADRTAVGYRLP--------VLDILRTAEEQRA--VGHLGPDLLGPDWDPE 136 Query: 155 YLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 L ALL+Q+ +AGIGN+Y E + ++P L P D Sbjct: 137 RALDNLRADPPRALGEALLDQRNLAGIGNVYKSELCFLLGVTPWLPVGEL------PADR 190 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 +L +K+L D +R + G Q+ F VYG+ PCL CG +R Sbjct: 191 AARLPTLAKKLLEANRD---RPVRRTTGLRG-----QDLF-VYGRAPRPCL-RCGTSVRV 240 Query: 274 IVQAG----RSTFYCTYCQ 288 Q R T++C CQ Sbjct: 241 ADQGDGSRERPTYWCPTCQ 259 >gi|284042578|ref|YP_003392918.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] gi|283946799|gb|ADB49543.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] Length = 281 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 110/292 (37%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEI R L + V N FD P H A G + VSRR K Sbjct: 1 MPELPEVEITARLLSEGVAGARVESTLAPGINALKTFDPPLH---ALDGTTLTGVSRRGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L++E + L +++HL +G + + + L ++ R+ Sbjct: 58 HLVVESDAGLVLLIHLMSAGRLQLYEKRAG------LRDRTSRILLRLDGDRELRLREFG 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPE--PADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + L+ + TLGP+ P F + K L L +Q+ Sbjct: 112 TKQAAWAKLLRAEELDAEEAVATLGPQAWPDPPPFGPLL------AKARPLHTLLRDQRT 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIG +V E LW A+LSP ++ R L + E + AI G + Sbjct: 166 IAGIGRSWVDEILWEARLSPFKRGRDLSEEEA-----------ERLRAATVAILGGAIAH 214 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+ + GEPC CG ++ + YC Q Sbjct: 215 YEEALALPLPDKLPLPLRVHRRQGEPC-PRCGAELKAVHYEDYVIAYCPVEQ 265 >gi|315503877|ref|YP_004082764.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Micromonospora sp. L5] gi|315410496|gb|ADU08613.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Micromonospora sp. L5] Length = 269 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 35/242 (14%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+LL G L++ VHLG+ G F P+ L ++ ++ + Sbjct: 51 GKHLLHHYAGELTLHVHLGLYGKFADGPGEPPAPVGQ---------LRLRLHSDRHWLEL 101 Query: 117 NDPRRFGFMDLVETSLKYQYPP----LRT-LGPEP--ADNSFNAIYLTHQFHKKNSNLKN 169 P T+ + PP LR LGP+P AD + Y + + + L Sbjct: 102 RGP----------TACELLTPPEVAALRDRLGPDPLRADADPDRAYA--RIRRSPTPLAA 149 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP--KDILYKLIQEIQKVLID 227 LL+Q +VAG G I+V EAL+RA L P+ R L D++ + + +++ ID Sbjct: 150 LLLDQSVVAGTGLIFVTEALFRAGLPPLLPGRELTPAGWAELWADLVTLMTRAVERGRID 209 Query: 228 AI-DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + DA L + + VY + G PC CG + R AGR+ ++C Sbjct: 210 TVRDA---DLPEATGRAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYWCPT 265 Query: 287 CQ 288 CQ Sbjct: 266 CQ 267 >gi|329998798|ref|ZP_08303217.1| endonuclease VIII [Klebsiella sp. MS 92-3] gi|328538553|gb|EGF64659.1| endonuclease VIII [Klebsiella sp. MS 92-3] Length = 263 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K +T N+ F FP + G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLT-------NVWFAFPQLQPYQTQLTGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + PQ N V + + T +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAGV-----EPQSNRV-LRVRLQTASKAI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D++ +P L +GP+ D + A L+ +F +N LL+ Sbjct: 107 SD----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+ LS RK L + + D L + + +I ++ L+D Sbjct: 161 QAFLAGLGNYLRVEILWQVGLSGKRKAAEL---SDSQLDALARALLDIPRLSYRTRGLVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + GE C CG +I + + R ++C C Sbjct: 218 DNKHHGALFR---------------FKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|111219798|ref|YP_710592.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111147330|emb|CAJ58980.1| Formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 248 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 29/250 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + D K+LL+ + + + VHLG+ G++ P V + LT + Sbjct: 19 GRPLTDAEAHGKHLLLRFDHDQVLHVHLGIYGTYAFGPGPAPVPT-----GAVRLRLTAD 73 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNS 165 T Y D R +L+E LR LGP+P + + + + Sbjct: 74 TG-------YADLRGPNACELLEPGGVKT---LRDRLGPDPLRGDADPDLAWRRIERSRT 123 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + LL+Q +VAG GNIY E L+RA + P+ R L + T + ++ ++ Sbjct: 124 PIAVLLLDQMVVAGPGNIYRAEVLFRAGVDPLLPGRDLTRRQWT------AIWADLVTLM 177 Query: 226 IDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 D + G H ++G VY + G+PCL C + A R Sbjct: 178 ADGVRTGRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRAGQPCLI-CATTVLTNRLAAR 236 Query: 280 STFYCTYCQK 289 + F+C CQ+ Sbjct: 237 NLFWCPGCQR 246 >gi|88706451|ref|ZP_01104156.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88699387|gb|EAQ96501.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 273 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + V+ + TV ++ F FP F+ G+++++V R K Sbjct: 1 MPEGPEIRRAADRIANVLVDETVEEVA-------FAFPELQRFTKVLSGQRVLEVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + +I H + G + I AK K P N SL +T + + Sbjct: 54 ALLTHFDNDYAIYSHNQLYGVWKI-----AKRGKMPATNR---SLRLALHTSGHSALLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 E + +P L TLGP+ ++ + +L L+Q Sbjct: 106 ASDISVWPREEIGM---HPFLATLGPDLLSAKLAWRDISERLAMPRFAGRSLAALYLDQH 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG GN E L+ A + P R+ R L + +L +E + + + GG + Sbjct: 163 FLAGSGNYLRSEILFCAGVHPKRRPRDLSRGERG------RLARETLDLPRRSYETGGIT 216 Query: 236 L--RDYVHIDGSI-GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L R + ++ G+ + F V+G+ G PC S C IRR R ++C CQ Sbjct: 217 LPPRLAATLKKTVKGFERRRFFVFGRDGRPCYS-CKDTIRRDSMGSRRIYWCPTCQ 271 >gi|238486134|ref|XP_002374305.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] gi|220699184|gb|EED55523.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] Length = 369 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-AD-NSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + ++ PL+ GP+P AD ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L + L+ + + + +D Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKE---LHSALHYVCSISVD 237 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + D++ F+ +S K P L N G I + GR++ Sbjct: 238 LLADSEKFPEDWL--------FKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|310799523|gb|EFQ34416.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Glomerella graminicola M1.001] Length = 427 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 35/267 (13%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKN-- 93 F A +G+K++ V + KY I + ++HLGM+G I+ A K +K Sbjct: 45 FEKALKGRKVVSVGSQGKYFWITFDKPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKAGE 104 Query: 94 -----PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEP 146 P++ + +N + DPRRFG + LV+ ++ PL+ GP+P Sbjct: 105 ADVWPPKYWKFQLETDDNPPVA---AAFTDPRRFGRIRLVDCPGADIRKHSPLKENGPDP 161 Query: 147 A--DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + F YL + ++ +K LL+Q ++GIGN E L++A+L P + S Sbjct: 162 VVDVDVFTEAYLAGKMRTRHVPVKALLLDQSHISGIGNWVADEVLYQARLHPEQYCDSF- 220 Query: 205 QNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 D+ + +L + ++ V A+D G S D D Y S K Sbjct: 221 -------DVAEVARLYEAVRYVCQTAVDKLGDS--DEFPADWLFNYRWGKGS---KGAAS 268 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L N G I + GR++ Y QK Sbjct: 269 ALPN-GDKIAFVTVGGRTSCYAPARQK 294 >gi|218200905|gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group] Length = 415 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 33/225 (14%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ +K + +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSK------YKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHK 162 + D RRF F+D E PP+ LGP D F ++L + Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPEA-----VPPISELGP---DALFEPLHLDDFVESLSR 166 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 K + +K LL+Q ++GIGN E L++A++ P+ +T S+I Sbjct: 167 KKAPIKALLLDQSFISGIGNWIADEVLYQARIHPM-QTASMISKE 210 >gi|169771323|ref|XP_001820131.1| formamidopyrimidine-DNA glycosylase [Aspergillus oryzae RIB40] gi|83767990|dbj|BAE58129.1| unnamed protein product [Aspergillus oryzae] Length = 369 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-AD-NSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + ++ PL+ GP+P AD ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L + L+ + + + +D Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTDDQVKE---LHSALHYVCSISVD 237 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + D++ F+ +S K P L N G I + GR++ Sbjct: 238 LLADSEKFPEDWL--------FKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|222640316|gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group] Length = 415 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 33/225 (14%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ +K + +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELSK------YKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHK 162 + D RRF F+D E PP+ LGP D F ++L + Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPEA-----VPPISELGP---DALFEPLHLDDFVESLSR 166 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 K + +K LL+Q ++GIGN E L++A++ P+ +T S+I Sbjct: 167 KKAPIKALLLDQSFISGIGNWIADEVLYQARIHPM-QTASMISKE 210 >gi|227541406|ref|ZP_03971455.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182957|gb|EEI63929.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] Length = 259 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 40/250 (16%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G ++ID K L I G I +HLG+ G F + A P+ + + + Sbjct: 41 GAELIDAFAHGKQLFIRFAGERYIHIHLGLIGKFKV--APLAAPVGVVRLRIADGEMAAD 98 Query: 107 TNTKKY--RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + ++ V+ +D VE +++ LG +P +N A L + Sbjct: 99 LHGPQWCRLVLKSD---------VEKAVE-------KLGSDPLENGAIAPNLA----RVG 138 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + AL++Q + AG+GNIY CE L+R ++SP + + D++ + + Sbjct: 139 RTIGAALMDQSLYAGVGNIYRCEVLFRQRISPFAPAVA-VDGQAIWDDLVQLMEYGARTG 197 Query: 225 LIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ID + +A G R+ H VY + G+PCL CG + V G Sbjct: 198 RIDTVRAEHSPEAQGRPPREDAH--------GGEVYVYRRAGQPCLV-CGTPVEMTVDGG 248 Query: 279 RSTFYCTYCQ 288 R ++C CQ Sbjct: 249 RKLYWCPTCQ 258 >gi|296170468|ref|ZP_06852056.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894939|gb|EFG74660.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 266 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 22/251 (8%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 SA G+ + S K+L G + VHLG+ G+F + P+ V Sbjct: 35 SAVVDGRVLRRTSVWGKHLFHHYAGGPIVHVHLGLYGAFT----------EWPRAGAVLP 84 Query: 102 SLTNNTNTKKYRVIYN-DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 + Y D R ++++ L LGP+P N + + + Sbjct: 85 EPVGQVRMRMVGAEYGADLRGPTVCEVIDEGRVSDV--LAKLGPDPLRNDADPSWAWKRI 142 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K + L++Q ++AG+GN+Y E L+R + P R R + + D Y + Sbjct: 143 AKSRRPVGALLMDQTVMAGVGNVYRSELLFRHGIDPFRPGRDVGE------DEFYAAWTD 196 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAG 278 + ++ + G + H G+ Y + VY + GE C CG IR V G Sbjct: 197 LVALMKVGLRRGQIVVVRPEHDHGAPPYRPDRPRTYVYRRAGEAC-RVCGDAIRTTVLEG 255 Query: 279 RSTFYCTYCQK 289 R+ F+C CQK Sbjct: 256 RNVFWCPSCQK 266 >gi|30695252|ref|NP_849798.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana] gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis thaliana] gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 274 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 8/209 (3%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + K + I K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRV 114 L +EL+ GM+G+ I+ + K +K+ + S + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D RRF + L+ P+ LGP+ KK +K LL+Q Sbjct: 121 SFTDKRRFAKVRLLANPTSVS--PISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 ++GIGN E L++A++ P++ SL Sbjct: 179 GYISGIGNWIADEVLYQARIHPLQTASSL 207 >gi|238893757|ref|YP_002918491.1| endonuclease VIII [Klebsiella pneumoniae NTUH-K2044] gi|238546073|dbj|BAH62424.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 263 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ L +K +T N+ F FP T+ G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLT-------NVWFAFPQLQPYQTQLIGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + PQ N V + + T +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAGV-----EPQSNRV-LRVRLQTASKAI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D++ +P L +GP+ D + A L+ +F +N LL+ Sbjct: 107 SD----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+ LS RK L + + D L + +I ++ L+D Sbjct: 161 QAFLAGLGNYLRVEILWQVGLSGKRKAAEL---SDSQLDALAHALLDIPRLSYRTRGLVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + GE C CG++I + + R ++C C Sbjct: 218 DNKHHGALFR---------------FKVFHRDGERC-ERCGRIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|271967519|ref|YP_003341715.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270510694|gb|ACZ88972.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 269 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 27/248 (10%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + + K+LL+ + + + VHLG+ G ++ V + L+N Sbjct: 41 GRVLRETDAHGKHLLLGFDDDRWLHVHLGIYGK-----SAFGPAPAPAPTGAVRLRLSNA 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 R P +D E + LGP+P + + + ++ Sbjct: 96 EEYADLR----GPNTCELLDPAEKKALHA-----RLGPDPLRADADPELAWRRIGRSRTS 146 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + L++Q +VAG+GNIY EAL+R + P R R L +G K I L+ ++ Sbjct: 147 IGVLLMDQSVVAGVGNIYRAEALFREGVDPSRPGRDL--THGQWKAIWADLV----ALMA 200 Query: 227 DAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 D + G H ++G VY ++G PC CG +R V AGR+ Sbjct: 201 DGVRVGRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRSGMPCFL-CGGEVRTGVLAGRN 259 Query: 281 TFYCTYCQ 288 F+C CQ Sbjct: 260 LFWCPACQ 267 >gi|153004588|ref|YP_001378913.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] gi|152028161|gb|ABS25929.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] Length = 282 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 24/248 (9%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + V+ R K+LL+ G+L + HL M+GS+ + + + + V + Sbjct: 44 GRTVESVTARGKHLLLRFSGDLVLRTHLRMNGSWHL-YRPGERWFRPRDAMRVLV----- 97 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NS 165 T+ + + D +L++ + L LGP+ +F+ + + + Sbjct: 98 -ETRPWIAVGFD---LPVAELLDARGLARQRDLARLGPDLLSPAFDPPEAERRLRARADR 153 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 L ALL+Q+ +AG+GN E L+ A L P R SL L L+ ++VL Sbjct: 154 ELGEALLDQRALAGVGNELKSEILFLAGLDPWRTVASLSGPE------LSALVATARRVL 207 Query: 226 IDAI---DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR--RIVQAGRS 280 + A+ + G ++ G + F VYG+ G+PC CG +R R R Sbjct: 208 LAAVAPFEGGSTTWLGGRRTTGRSNPGERLF-VYGRAGQPC-RRCGGPVRVGRQGAGARL 265 Query: 281 TFYCTYCQ 288 T++C CQ Sbjct: 266 TYHCPRCQ 273 >gi|296139126|ref|YP_003646369.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] gi|296027260|gb|ADG78030.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 22/245 (8%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFI-IEHTSCAKPIKNPQHNHVTISLTN 105 G++ + K+L +G L++ VHLG+ GSF E A P Q + + Sbjct: 41 GREFLGADAWGKHLWHRYDGGLTVHVHLGLYGSFADFELLDGAPPAPVGQVRMRIVGPRD 100 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 T+ + + LV + L LGP+P + + + Sbjct: 101 GTDLRGPTACH----------LVSEEQIDEV--LARLGPDPLRADADPDPAWRRISRSRR 148 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQK 223 + L++QK+VAG+GN+Y E L+RA L P R+ R+L + +G D++ + +++ Sbjct: 149 PIGALLMDQKVVAGVGNVYRAEVLYRAGLDPHREGRALGREDFDGIWADLVALMPIGVER 208 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + + A + H S + VY + GEPC C +R V R+ ++ Sbjct: 209 GRMHVVRA------EDDHGAPSYAPDRPRTYVYRRAGEPC-RVCRTPVRTEVMEARNLYW 261 Query: 284 CTYCQ 288 C CQ Sbjct: 262 CPTCQ 266 >gi|227487698|ref|ZP_03918014.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092392|gb|EEI27704.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] Length = 259 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 40/250 (16%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G ++ID K L I G I +HLG+ G F + A P+ + + + Sbjct: 41 GAELIDAFAHGKQLFIRFAGERYIHIHLGLIGKFKV--APLAAPVGVVRLRIADGEMAAD 98 Query: 107 TNTKKY--RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + ++ V+ +D VE +++ LG +P +N A L + Sbjct: 99 LHGPQWCRLVLKSD---------VEKAVE-------KLGSDPLENGAIAPNLA----RVR 138 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + AL++Q + AG+GNIY CE L+R ++SP + + D++ + + Sbjct: 139 RTIGAALMDQSLYAGVGNIYRCEVLFRQRISPFAPAVA-VDGQAIWDDLVQLMEYGARTG 197 Query: 225 LIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ID + +A G R+ H VY + G+PCL CG + V G Sbjct: 198 RIDTVRAEHSPEAQGRPPREDAH--------GGEVYVYRRAGQPCLV-CGTPVEMTVDGG 248 Query: 279 RSTFYCTYCQ 288 R ++C CQ Sbjct: 249 RKLYWCPTCQ 258 >gi|164428247|ref|XP_958637.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] gi|157072070|gb|EAA29401.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] Length = 415 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 27/217 (12%) Query: 1 MPELPE----VEIIRRNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPE+ E V +R + + V+K+ D + D P +A GKK++ Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPK-MAAGLIGKKMVSAGT 59 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIK----NPQHNHVTISL 103 + KY +EL +++H GM+G I+ A KP + P++ I Sbjct: 60 QGKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIET 119 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADN--SFNAIYLTHQ 159 + + + DPRRFG + +V+ K +Y PL GP+P + F YL + Sbjct: 120 EDGDE-----MAFTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREK 174 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 + +K LL+Q +++GIGN E L+ AKL P Sbjct: 175 MKSRRVPIKALLLDQAVISGIGNWVADEVLYHAKLHP 211 >gi|152969290|ref|YP_001334399.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166920094|sp|A6T6E8|END8_KLEP7 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|150954139|gb|ABR76169.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 263 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 122/301 (40%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K +T N+ F FP + G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLT-------NVWFAFPQLQPYQTQLTGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + PQ N V + + T +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAGV-----EPQSNRV-LRVRLQTASKAI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D++ +P L +GP+ D + A L+ +F +N LL+ Sbjct: 107 SD----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+ LS RK L + + D L + +I ++ L+D Sbjct: 161 QAFLAGLGNYLRVEILWQVGLSGKRKAAEL---SDSQLDALAHALLDIPRLSYRTRGLVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + GE C CG +I + + R ++C C Sbjct: 218 DNKHHGALFR---------------FKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|74311239|ref|YP_309658.1| endonuclease VIII [Shigella sonnei Ss046] gi|123617735|sp|Q3Z489|END8_SHISS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|73854716|gb|AAZ87423.1| endonuclease VIII/DNA N-glycosylase with an AP lyase activity [Shigella sonnei Ss046] Length = 263 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K + L N D L + +I + L+D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFSYATRGLVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 220 KHHGALFR---------------FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|227495344|ref|ZP_03925660.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] gi|226831214|gb|EEH63597.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] Length = 274 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 10/154 (6%) Query: 139 LRTLGPEP-ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L+ LGP+P ++ + + + +++Q +VAG GNIY E L+R +SP Sbjct: 128 LKRLGPDPLVNHPADRAEFIRLVRARKRAIGELVMDQSVVAGPGNIYRAECLFRVGISPF 187 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG--GSSLRDYVHIDGSIGYFQNAFSV 255 RK ++ + L L +++ L+D ++ G + L + + + F V Sbjct: 188 RKGSNISEKR------LGLLWDDLRAGLLDGLETGFISTMLEEDLRAEDPEDVEAQRFYV 241 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +TG PCL CG M+ + R F+C CQ+ Sbjct: 242 YHRTGRPCL-RCGSMVAEQLMQNRRLFWCPGCQR 274 >gi|254382138|ref|ZP_04997500.1| DNA glycosylase [Streptomyces sp. Mg1] gi|194341045|gb|EDX22011.1| DNA glycosylase [Streptomyces sp. Mg1] Length = 280 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 29/262 (11%) Query: 30 RKNLRFDF--PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 R+ LR D P + G+ +DV+ R K+LL +EG L++ HL M G++ + + Sbjct: 40 RELLRSDLRVPRLATVDLTGRTTLDVTPRGKHLLARIEGGLTLHSHLRMDGAWHV--FAA 97 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + + + L T+T V Y R ++L+ T + + + LGP+ Sbjct: 98 GEKWRGGPDYEIRAVLGTATHTA---VGY----RLPVLELLRTRDEDRV--VGHLGPDLL 148 Query: 148 DNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ T + L ALL+Q+ +AGIGNIY E + A+++P +L Sbjct: 149 GPDWDPALATARLLAAPERPLGEALLDQRNLAGIGNIYKSELCFLAQVTPWTPVGAL--- 205 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 P + +L ++L D ++ +H G Q+ F VYG+ PCL Sbjct: 206 ---PGSDVPRLAGAAHRLLAANKDRRRNTT--GIHRPG-----QDLF-VYGRARRPCL-R 253 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG +R Q R T++C CQ Sbjct: 254 CGTPVREAPQEDRPTYWCPRCQ 275 >gi|320108191|ref|YP_004183781.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] gi|319926712|gb|ADV83787.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] Length = 305 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 114/287 (39%), Gaps = 42/287 (14%) Query: 31 KNLRFDFPH----HFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 K +R D P +A +K+ V K+L + + + +HLGM G F E T Sbjct: 21 KKIRVDAPEGSRFQDAALVDNRKLEKVIAVGKHLGYDFGKDRILHIHLGMYGDFS-EGTG 79 Query: 87 CAKPIKNPQ----HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL---------- 132 P K ++ I K Y++ G ++ + + Sbjct: 80 PLPPEKGALRVRLYDAQAIKGPVEPGESKRHAWYSNDDGTGHIEAAKVAWVELRGPTDCS 139 Query: 133 ---KYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + Q+ L LGP+P N A + + + + L++Q I AG+GNIY E Sbjct: 140 VFSQQQWEALEARLGPDPL-NGDPATKFVEKVRARKTAVAALLMDQTIAAGVGNIYRAEL 198 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG-------GSSLRDYVH 241 L+RAKL P ++ + K ++ I K I + AG + +D Sbjct: 199 LFRAKLDPFTPGNAVSE----------KTLEAIWKDAIPLMKAGMVDRRIITTKPKDRPT 248 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + A VY + G+PCL CG I V AGR+ F+C CQ Sbjct: 249 KKTGLPLKEEAHYVYRRQGKPCLI-CGTKILTQVMAGRNLFWCPNCQ 294 >gi|325001208|ref|ZP_08122320.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia sp. P1] Length = 278 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 114/297 (38%), Gaps = 42/297 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIID------VSRRA 57 +PE + R + + ++ + RF T G ++D V Sbjct: 1 MPEGHTVHRLARLQRRRYAGREVAVSSPQGRF---------TTGADVVDGRVLETVEAHG 51 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + VHLG+ G F A P V + + T+ R Sbjct: 52 KHLFQHYGPDTVVHVHLGLWGRFANRRLPEAPP-----RGQVRMRIVGGTHYADLR---- 102 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 P +D V + LG +P + + + H+F + + L L++Q ++ Sbjct: 103 GPAACELLDDVAVKALHD-----RLGEDPLRDDADPDRVRHRFARSRAPLAALLMDQSVI 157 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQK-----VLIDAIDA 231 AG+GN++ E L+R L P+ R L ++ G D L +++E ++ L+ D Sbjct: 158 AGVGNVFRAETLFRTGLDPLTPARDLDDDSFGLLWDDLSAMLREGERRGRIETLLPEHDP 217 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D + S+ Y Y +TG PCL CG I R+ F+C CQ Sbjct: 218 ALLEPADRGAVCASVVY------AYRRTGRPCLV-CGTPIAHREFRARNLFWCPRCQ 267 >gi|294632524|ref|ZP_06711084.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292835857|gb|EFF94206.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 269 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 43/246 (17%) Query: 1 MPELPEVEIIR----RNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE ++ NL+ +++ + V L +D P A G ++ V Sbjct: 29 MPELPEVEALKDFLTENLVGHEIVRVLPVAVSVLKT----YDPP---VTALEGHEVTAVR 81 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTIS------LTN 105 R K+L +E G ++ HL G +P K P V + LT Sbjct: 82 RHGKFLDLETGGGPHLVTHLARGGWLQWRDRLPDGPPRPGKGPLALRVALETGAGFDLTE 141 Query: 106 NTNTKKYRV-IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 K+ V + DPR + P + LGP+P + F+ + Sbjct: 142 AGTQKRLAVYVVRDPR--------------EVPGVARLGPDPLADDFDEERFARLLAGER 187 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K AL +Q ++AG+GN Y E L A++SP ++T +L + L ++ Sbjct: 188 RQIKGALRDQGLIAGVGNAYSDEILHAARMSPFKRTAALTDEE------IAGLYAALRTT 241 Query: 225 LIDAID 230 L +A++ Sbjct: 242 LTEAVE 247 >gi|301020828|ref|ZP_07184892.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] gi|300398474|gb|EFJ82012.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] Length = 263 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 42/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG--- 232 +AG+GN E LW+ L+ RK + L I + +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNRKAKDLSAAQLDALADALLDIPRLSYATRGQVDENKHH 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 223 GALFR---------------FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|254444020|ref|ZP_05057496.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] gi|198258328|gb|EDY82636.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] Length = 266 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 23/186 (12%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +L G + HLGM+GS C + +H+H+ I + +T +++ Sbjct: 58 GKRMLFAFSGGAFLEAHLGMTGSL----HRCEVDCEEGKHDHLAIRSSEST------LVF 107 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALL 172 DPR+FG + L E L + L PEP F ++ S LK LL Sbjct: 108 RDPRKFGKLALHFADEGDLPQWW---NELPPEPHAKGFTRERFGPLLARRQGSVLKALLL 164 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q + G+GN E LWRA++ P R+ SL + L L QE + V +A+ Sbjct: 165 HQDLFPGVGNWMADEILWRARIRPDRRLGSLSKGE------LDALFQETRWVCREAVRII 218 Query: 233 GSSLRD 238 G+ D Sbjct: 219 GTDYTD 224 >gi|262201295|ref|YP_003272503.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] gi|262084642|gb|ACY20610.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 51/309 (16%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEV I R + ++ + V + + + D P+ A G+ + V R Sbjct: 1 MPELPEVAAIADYVDSRAAGLPIRRVDVASLSVLKTA---DPPY---TALVGRIVESVGR 54 Query: 56 RAKYLLI--------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL+I + E + +++HL +G +P++ + + + + Sbjct: 55 VGKYLVIRTVPGADTDPEPVILLVIHLSRAGWLRWSEDLSPRPLRPGGKSPIALRVHCGL 114 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD---NSFNAIYLTHQFHKKN 164 ++ + V ++ + +V + TLGP+ + F AI + Sbjct: 115 PSEGFDVTEAGTQKRLAVWIVRDLADIDR--VATLGPDVLSLSVSEFGAI-----LAQTA 167 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +KN L +Q+++AGIGN Y E L A+LSP +SL + + L ++ V Sbjct: 168 GRIKNVLADQRVMAGIGNAYSDEILHTARLSPFATAKSLTEEQ------VSTLYDAMRSV 221 Query: 225 LIDAIDAGGSSLRDYVHIDG-SIGYFQN----AFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 L DA ++G ++ ++ V+ +TG PC CG +R + A R Sbjct: 222 LADATG----------RLEGQTVARLKSEKRTGLRVHARTGLPC-PVCGDTVREVSFADR 270 Query: 280 STFYCTYCQ 288 S YC CQ Sbjct: 271 SFQYCPTCQ 279 >gi|262041218|ref|ZP_06014430.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041447|gb|EEW42506.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 263 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 123/301 (40%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ L +K +T N+ F FP T+ G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLT-------NVWFAFPQLQPYQTQLIGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + PQ N V + + T +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAGV-----EPQSNRV-LRVRLQTASKAI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D++ +P L +GP+ D + A L+ +F +N LL+ Sbjct: 107 SD----IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+ LS RK L + + D L + +I ++ L+D Sbjct: 161 QAFLAGLGNYLRVEILWQVGLSGKRKAAEL---SDSQLDALAHALLDIPRLSYRTRGLVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + GE C CG +I + + R ++C C Sbjct: 218 DNKHHGALFR---------------FKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|311894827|dbj|BAJ27235.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 268 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 28/254 (11%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + + K+L + G + VHLG+ G++ +P+ V + Sbjct: 36 AALIDGRVLDEAQAHGKHLFLGF-GEHWLHVHLGLYGTYAFGAGEPPEPV-----GQVRL 89 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +T Y D R +L+ + K LGP+P + Sbjct: 90 RMVGDTG-------YADLRGPTACELLTPAEKAAV--HARLGPDPLRPGDAGDAAWWRIS 140 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + S + LL+QK++AG+GN+Y E L+R +SP R R+L + D ++ ++ Sbjct: 141 RSGSTIAALLLDQKVLAGVGNVYRAEVLFRLGISPHRPGRALSRPE---WDAIWA---DL 194 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ D + AG H ++G VY ++ PCL CG +R Sbjct: 195 AALMRDGVAAGRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRSDRPCLV-CGTPVRTEE 253 Query: 276 QAGRSTFYCTYCQK 289 A R+ F+C CQ+ Sbjct: 254 LAARNLFWCPRCQR 267 >gi|284040426|ref|YP_003390356.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] gi|283819719|gb|ADB41557.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] Length = 271 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 120/291 (41%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R+ L V+ I + K L A G++ R K L Sbjct: 1 MPELPEVEIRRQYLETSSLYQPVSHIEVEDKKLLTTDLATLQQALIGRQFTGTRRVGKNL 60 Query: 61 LIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 I + II +H GM+G H S + P+ + T+ N + P Sbjct: 61 FIFTDAPDVIIHMHFGMTGDLEYYHAS----LDRPRFARIVFEFTSGFNLG-----FLCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F + LV + + +G + D S L+ + +K + +K LL+Q +VAG Sbjct: 112 RKFERVGLVTDVDAFLLR--KKIGEDGLDISLET--LSDRVRRKKAFIKPVLLDQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-D 238 +GN V E L++A + P ++ +L + I +L+ E +++R + Sbjct: 168 LGNWIVDEVLFQALIHPEQRADTLTNDQMASLHIAIRLVLE-------------TAIRYE 214 Query: 239 YVHIDGSIGYF----QNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYC 284 + D IG+ + S Y C I R V GR+TF+C Sbjct: 215 ATYRDFPIGFLIHVREWDDSPYDDVEAHKYCPRCKTRIERSVVGGRTTFFC 265 >gi|72161098|ref|YP_288755.1| DNA repair hydrolase [Thermobifida fusca YX] gi|71914830|gb|AAZ54732.1| putative DNA repair hydrolase [Thermobifida fusca YX] Length = 292 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 32/262 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT------ 100 G+ + + K+L + + + VHLG+ G++ + + + P+ T Sbjct: 41 GRVLGEAEAHGKHLFLGFDSGEWVRVHLGLYGAWTFGDATGERSLGAPRTEAGTERALQR 100 Query: 101 -----ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL------RTLGPEPADN 149 + T + R++ D + DL S P LGP+P Sbjct: 101 DADGFVVPPPPTGAVRLRLVSAD----AWADLRGPSACEVIDPAGKQAVQARLGPDPLRA 156 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + + + + + L+ Q ++AG+GNIY E+L+RA + P R R L + Sbjct: 157 DADPAAAWQKIRRSRTAIAVLLMRQDVIAGVGNIYRAESLFRAGIDPYRPGRDLTEPQ-- 214 Query: 210 PKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 L ++ +L D + G + H I + + Y +TG+PC Sbjct: 215 ----WEALWADLVHLLRDGVRDGRIITTRPEHRTHPGPDIPREEAHYVAY-RTGQPC-RV 268 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 C IR AGRS ++C CQ Sbjct: 269 CSTPIRSAELAGRSLYWCPGCQ 290 >gi|26246683|ref|NP_752723.1| endonuclease VIII [Escherichia coli CFT073] gi|110640924|ref|YP_668652.1| endonuclease VIII [Escherichia coli 536] gi|191174054|ref|ZP_03035570.1| endonuclease VIII [Escherichia coli F11] gi|227884317|ref|ZP_04002122.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300989874|ref|ZP_07179003.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|300996474|ref|ZP_07181448.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|301046040|ref|ZP_07193220.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|331656734|ref|ZP_08357696.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] gi|57012700|sp|Q8FJU5|END8_ECOL6 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|122958487|sp|Q0TJX8|END8_ECOL5 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|26107082|gb|AAN79266.1|AE016757_170 Endonuclease VIII [Escherichia coli CFT073] gi|110342516|gb|ABG68753.1| endonuclease VIII [Escherichia coli 536] gi|190905662|gb|EDV65285.1| endonuclease VIII [Escherichia coli F11] gi|222032454|emb|CAP75193.1| endonuclease VIII [Escherichia coli LF82] gi|227838403|gb|EEJ48869.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300301957|gb|EFJ58342.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|300304528|gb|EFJ59048.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|300407277|gb|EFJ90815.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|307552567|gb|ADN45342.1| endonuclease VIII [Escherichia coli ABU 83972] gi|312945242|gb|ADR26069.1| endonuclease VIII [Escherichia coli O83:H1 str. NRG 857C] gi|315292029|gb|EFU51381.1| zinc finger found in FPG and IleRS [Escherichia coli MS 153-1] gi|315299245|gb|EFU58499.1| zinc finger found in FPG and IleRS [Escherichia coli MS 16-3] gi|324010437|gb|EGB79656.1| zinc finger found in FPG and IleRS [Escherichia coli MS 60-1] gi|331054982|gb|EGI26991.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] Length = 263 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K + L N D L + +I ++ +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRLSYATRGQVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 220 KYHGALFR---------------FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|297156756|gb|ADI06468.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P + G++++DV+ R K+L Sbjct: 1 MPEGDTVWRTARRLDQALAGRQLTGCDLR-------IPRLATVDLAGRQVMDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M G++ + + + P H I T YR+ Sbjct: 54 LTRLEGGLTLHSHLRMDGAWHL-YDPGERWRGGPLHQVRAILSTAERTAVGYRLP----- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 108 ---VLELLRTTDEDRA--VGHLGPDLLGPDWDPHEALRRLLADPARPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + ++SP + +P+ ++ + K L++A A Sbjct: 163 IGNVYKSELCFLVRVSPWLP----VGQVPSPERLV-----ALAKRLLEANKA------RP 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 I + VYG+ G+PCL CG +R ++ G RST++C CQ Sbjct: 208 ARITTAESRADRRLWVYGRAGKPCL-RCGTPVR--MEQGRADKERSTYWCPACQ 258 >gi|227875970|ref|ZP_03994093.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] gi|227843502|gb|EEJ53688.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] Length = 389 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + +++ + AL++Q + AG+GNIY EAL+ A+LSP R Sbjct: 239 LGPDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGNIYRAEALFAARLSPFVPAR 298 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL---RDYVHI-------DGSIGYFQN 251 + + L ++ + + + +++G + RD G I Sbjct: 299 EVSERK------LRRVWDWLVEYMARGVESGRVTTLAPRDAADFATCQAGAGGKIQAVDQ 352 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 353 RYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|157160194|ref|YP_001457512.1| endonuclease VIII [Escherichia coli HS] gi|170020941|ref|YP_001725895.1| endonuclease VIII [Escherichia coli ATCC 8739] gi|188492106|ref|ZP_02999376.1| endonuclease VIII [Escherichia coli 53638] gi|194439240|ref|ZP_03071320.1| endonuclease VIII [Escherichia coli 101-1] gi|253774316|ref|YP_003037147.1| endonuclease VIII [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160784|ref|YP_003043892.1| endonuclease VIII [Escherichia coli B str. REL606] gi|300929484|ref|ZP_07144952.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|166920090|sp|A7ZXX5|END8_ECOHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|189037132|sp|B1IY15|END8_ECOLC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157065874|gb|ABV05129.1| endonuclease VIII [Escherichia coli HS] gi|169755869|gb|ACA78568.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli ATCC 8739] gi|188487305|gb|EDU62408.1| endonuclease VIII [Escherichia coli 53638] gi|194421825|gb|EDX37832.1| endonuclease VIII [Escherichia coli 101-1] gi|242376476|emb|CAQ31180.1| endonuclease VIII [Escherichia coli BL21(DE3)] gi|253325360|gb|ACT29962.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972685|gb|ACT38356.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli B str. REL606] gi|253976879|gb|ACT42549.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BL21(DE3)] gi|300462593|gb|EFK26086.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|309700936|emb|CBJ00233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli ETEC H10407] gi|323938292|gb|EGB34549.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1520] gi|323963094|gb|EGB58664.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H489] Length = 263 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|145637015|ref|ZP_01792679.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269873|gb|EDK09812.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 98 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%) Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L+++I++VL +AI GG++L+D++ DG GYF VYG +PC CG I +V Sbjct: 25 QLVEQIKQVLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLV 83 Query: 276 QAGRSTFYCTYCQK 289 R++FYC CQK Sbjct: 84 IGQRNSFYCPKCQK 97 >gi|306819251|ref|ZP_07452962.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] gi|304648033|gb|EFM45347.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] Length = 389 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + +++ + AL++Q + AG+GNIY EAL+ A+LSP R Sbjct: 239 LGPDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGNIYRAEALFAARLSPFVPAR 298 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL---RDYVHI-------DGSIGYFQN 251 + + L ++ + + + +++G + RD G I Sbjct: 299 EVSERK------LRRVWDWLVEYMARGVESGRVTTLAPRDAADFATCQAGAGGKIQAVDQ 352 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 353 RYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|168061202|ref|XP_001782579.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665899|gb|EDQ52568.1| predicted protein [Physcomitrella patens subsp. patens] Length = 496 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 125/305 (40%), Gaps = 45/305 (14%) Query: 1 MPELPEVEIIR-----RNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEV+ + R L +++K + D K + P A GKKI++ Sbjct: 1 MPELPEVQAAKVLVGSRCLGGVIVKALVAND----SKVIDGVTPAALQKALLGKKILETH 56 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R+ K+L ++L+ GMSG+ ++ K +K Q+ + T +K ++V Sbjct: 57 RKGKHLWLQLDSPPYPSFQFGMSGAVVV------KGVKGLQYKSSKVDDTEEFPSKYWKV 110 Query: 115 ----------IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + D RRF + L++ K PP+ LG + +A T K Sbjct: 111 HLKLDTGVEVAFTDKRRFARVRLLDDPAKE--PPISELGLDAYLELPSAKDFTEALKTKK 168 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q +AGIGN E L+++K+ P + SL T +L I+ V Sbjct: 169 GAIKALLLDQSFLAGIGNWVGDEVLYQSKIHPEQSANSLKDEECT------RLHTAIRVV 222 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L A+ VH D F ++ + + G I + GR++ Y Sbjct: 223 LDKAV---------SVHADSE--KFPRSWIFHHRWDRKPGKIRGNQIETVTVGGRTSAYV 271 Query: 285 TYCQK 289 QK Sbjct: 272 PNIQK 276 >gi|281177852|dbj|BAI54182.1| endonuclease VIII [Escherichia coli SE15] Length = 263 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K + L N D L + +I ++ +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAPQLDALAHALLDIPRLSYATRGQVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 220 KYHGALFR---------------FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|302845178|ref|XP_002954128.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] gi|300260627|gb|EFJ44845.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] Length = 325 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 22/244 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R + + + + + F+ P A G++++ R+ K Sbjct: 1 MPELPEVEAAKRLMERGCVGKRIERVVAAKDDKVFEDASPDDVRRALEGRRVVAAHRKGK 60 Query: 59 YLLIELE--GNLSIIVHLGMSGSFIIEHTSCAK-----PIKNPQHNHVTISLTNNTNTKK 111 YL +EL+ L ++H GM+G ++++ K NP + Sbjct: 61 YLWLELDNPDGLWPLLHFGMTGGIVVQNMGATKYKRIHLASNPDEWPPRFTKLELDLEGG 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE-----PADNSFNAIYLTHQFHKKNSN 166 +V + D RRFG + L+ + PL LG + P F A Sbjct: 121 AKVAFVDVRRFGRVKLLANPSAQE--PLSKLGFDVLDELPPLEQFIAAVRKRVARAPGLK 178 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q+ +GIGN E L++A++ P + SL + L L + I+ V+ Sbjct: 179 IKALLLDQEFCSGIGNWVGDEVLYQARIHPEQSAASLGDS------ALAALRESIRSVVT 232 Query: 227 DAID 230 A++ Sbjct: 233 QAVE 236 >gi|16128689|ref|NP_415242.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89107572|ref|AP_001352.1| endonuclease VIII [Escherichia coli str. K-12 substr. W3110] gi|170080381|ref|YP_001729701.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238899979|ref|YP_002925775.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|300947207|ref|ZP_07161417.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|300957658|ref|ZP_07169849.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|301027113|ref|ZP_07190483.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|301647439|ref|ZP_07247246.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|307137325|ref|ZP_07496681.1| endonuclease VIII [Escherichia coli H736] gi|331641215|ref|ZP_08342350.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] gi|1706651|sp|P50465|END8_ECOLI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741113|sp|B1X6P5|END8_ECODH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|259645858|sp|C4ZWI9|END8_ECOBW RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|1054938|gb|AAC45355.1| endonuclease VIII [Escherichia coli] gi|1786932|gb|AAC73808.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|2190281|dbj|BAA20414.1| endonuclease VIII [Escherichia coli] gi|4062310|dbj|BAA35378.1| endonuclease VIII [Escherichia coli str. K12 substr. W3110] gi|169888216|gb|ACB01923.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238861032|gb|ACR63030.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|260450133|gb|ACX40555.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli DH1] gi|299879402|gb|EFI87613.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|300315619|gb|EFJ65403.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|300453193|gb|EFK16813.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|301074413|gb|EFK89219.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|315135370|dbj|BAJ42529.1| endonuclease VIII [Escherichia coli DH1] gi|315614659|gb|EFU95300.1| endonuclease VIII [Escherichia coli 3431] gi|323942975|gb|EGB39138.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E482] gi|323971999|gb|EGB67219.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TA007] gi|331038013|gb|EGI10233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] Length = 263 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|254821431|ref|ZP_05226432.1| hypothetical protein MintA_15951 [Mycobacterium intracellulare ATCC 13950] Length = 268 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/295 (23%), Positives = 115/295 (38%), Gaps = 36/295 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVSVSSPQGRF---ADAAAAVDGRVLQRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND----- 118 G + VHLG+ G+F T +P S + R+I D Sbjct: 58 YAGGPIVHVHLGLYGAF----TEWERPDDG--------SFPEAVGQVRMRMIGADYGTDL 105 Query: 119 --PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 P +D + S L LGP+P + + + K + L++Q + Sbjct: 106 RGPTVCEVIDEGQVSDV-----LARLGPDPLRGDADPSWAWKRIAKSRRPIGALLMDQTV 160 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y E L+R + P R R + ++ D + + + KV + G + Sbjct: 161 MAGVGNVYRSELLYRHGIDPFRPGRDVGEDE---FDAAWIDLVALMKV---GLRRGKIIV 214 Query: 237 RDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H G+ Y + VY ++GEPC C IR V GR+ F+C CQK Sbjct: 215 VRPEHDHGAPSYRPDRPRTYVYRRSGEPC-RVCKAPIRTTVLEGRNVFWCPTCQK 268 >gi|170683193|ref|YP_001742818.1| endonuclease VIII [Escherichia coli SMS-3-5] gi|226741116|sp|B1LLF1|END8_ECOSM RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|170520911|gb|ACB19089.1| endonuclease VIII [Escherichia coli SMS-3-5] Length = 263 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRF--RNRQFAGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+ L+ K + L N D L + +I ++ +D Sbjct: 161 QAFLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRLSYATRGQVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + GEPC CG +I + + R ++C C Sbjct: 218 ENKYHGALFR---------------FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|311743069|ref|ZP_07716877.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313749|gb|EFQ83658.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 269 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 29/270 (10%) Query: 31 KNLRFDFPHHFSAATR--GKKIIDVSRRAKYLLIELEG-NLSIIVHLGMSGSFIIEHTSC 87 + +R P AA R G+ + K+L + +E + VHLG+ G+F I Sbjct: 12 RRVRSTSPQGRFAAGRLDGRVLAGAEAWGKHLFVSVEQVPWQVHVHLGLYGTFRISRGG- 70 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P V LT + + + D R +L+ L LGP+P Sbjct: 71 ----RLPVVGQVRWRLTASARSGAP--VTADLRGPTACELLMPDEVDAV--LARLGPDPL 122 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN- 206 +A H+ + + + LL+QK+++G+GN+Y E L+R + P+ R L ++ Sbjct: 123 RADADADAAWHRVSRSGTPVAVLLLDQKVLSGVGNVYRAEVLFRHGIDPMTPGRDLDRSR 182 Query: 207 -NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS------VYGKT 259 + D+++ + +++ ID + H G +G A + VY + Sbjct: 183 WDAVWDDLVHLMAIGVRRGRIDTVRP--------EHEPGPMGRSARADAHGGEVYVYRRD 234 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G CL CG I V AGR+ F+C CQ Sbjct: 235 GRACLV-CGTTICSTVLAGRNLFWCPGCQS 263 >gi|256023684|ref|ZP_05437549.1| endonuclease VIII [Escherichia sp. 4_1_40B] Length = 263 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|331645866|ref|ZP_08346969.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] gi|330910465|gb|EGH38975.1| endonuclease V3 [Escherichia coli AA86] gi|331044618|gb|EGI16745.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] Length = 263 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWHVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K + L N D L + +I ++ +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAPQLDALAHALLDIPRLSYATRGQVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 220 KYHGALFR---------------FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|257055240|ref|YP_003133072.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256585112|gb|ACU96245.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 270 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 28/230 (12%) Query: 66 GNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 G+ I+ VHLG+ G+F A+P+ V + L T+ R P R Sbjct: 59 GSQGIVHVHLGLYGTFTEYPLPVAEPV-----GQVRMRLVGRTHWTDLR----GPNRCEL 109 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + LGP+P + + + + + L L++Q ++AG+GN+Y Sbjct: 110 LTPPQAEAL-----IARLGPDPLRDDADPQEAWERISRSRAPLAGLLMDQSVIAGVGNVY 164 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+R ++ P+ RSL + D L+ ++++++ + + G + H Sbjct: 165 RAEVLYRQRIDPMLPGRSLSRRR---WDALWA---DLRQLMREGVRLGRIDTVEPEHRPE 218 Query: 245 SIGYFQ------NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G VY +T +PCL CG + + AGR+ ++C CQ Sbjct: 219 VMGRAPRRDRHGGEVYVYRRTHKPCLV-CGTPVAQTKLAGRNLYWCPTCQ 267 >gi|291303611|ref|YP_003514889.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] gi|290572831|gb|ADD45796.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] Length = 269 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAKYLL 61 +PE +I R T + + RF +A R G + K L Sbjct: 1 MPEGHVIHRLADRYATAFTGGPLAVSSPQGRF-----ADSAKRLDGLSMTGTEAHGKQLF 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +E EG I +HLG+ G + +P V + L Y+D R Sbjct: 56 LEFEGQQWIRIHLGIYGK-----VAFGEPPAPAVEGAVRLRLEGER-------AYSDLRG 103 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +L+ K +GP+P AD +A + + ++ L++Q IV+G Sbjct: 104 PAVCELIGPDEKQAV--HDRIGPDPLRADADPDAAW--RLISRSKRDIGTLLMDQAIVSG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GNIY E L+R + P+R ++ + + D++ + + ++ ID + A L Sbjct: 160 VGNIYRAEVLFRHGIDPMRPGTAMTEAEWDAVWADLVELMREGVKLGRIDTVRA--EHLP 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + + VY + G+PCL CG + GR+ F+C CQ Sbjct: 218 EAMGREPRVDRHGGEVYVYRRDGKPCLV-CGTAVAIAKHQGRNLFWCPSCQ 267 >gi|313813496|gb|EFS51210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL025PA1] gi|327334147|gb|EGE75861.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 299 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 39/299 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P +PE +I R + + + + RF +A G + K+L+ Sbjct: 26 PTVPEGHVIHRLANAIDSAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLV 82 Query: 62 IELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ + + + +HLG+ G +E T P V + +T+ R Sbjct: 83 VDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQVRLRITDGVTAADLR----G 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P+ ++ E T+GP+P + + + + + + + LL+Q++ A Sbjct: 132 PQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAA 186 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------D 230 G+GNIY E L+R ++ P + + + D++ + ++ ID + + Sbjct: 187 GVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPE 246 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A G R + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 247 AMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 296 >gi|314968408|gb|EFT12506.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL037PA1] Length = 299 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/299 (20%), Positives = 119/299 (39%), Gaps = 39/299 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P +PE +I R + + + + RF +A G + K+L+ Sbjct: 26 PTVPEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLV 82 Query: 62 IELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ + + + +HLG+ G +E T P V + +T+ R Sbjct: 83 VDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQVRLRITDGVTAADLR----G 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P+ ++ E T+GP+P + + + + + + + LL+Q++ A Sbjct: 132 PQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAA 186 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------D 230 G+GNIY E L+R ++ P + + + D++ + ++ ID + + Sbjct: 187 GVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPE 246 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A G R + + VY + +PCL C +R + Q GR F+C+ CQ+ Sbjct: 247 AMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCSRCQR 296 >gi|326383692|ref|ZP_08205377.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326197456|gb|EGD54645.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 294 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 50/308 (16%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEV I R + ++ + V + + + D P+ A G+ + V R Sbjct: 1 MPELPEVTAIATFLDSRAAGLPIRRVDVASLAVLKTA---DPPY---TALAGRIVSAVDR 54 Query: 56 RAKYLLI-------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL+I E + + +++HL +G P K + + + Sbjct: 55 IGKYLVIRTAPGAGEADVEIDLVIHLSRAGWVRWSDALSQTPPKPGGKGPIALRVHCGLP 114 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIYLTHQFHKKNS 165 + + V ++ +V + + + + +LGP+ + + F AI + Sbjct: 115 GEGFDVTEAGTQKRLAAWIVRDTAEIER--ISSLGPDVLGLSRDEFGAI-----LAGSTA 167 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +KN + +Q++++G+GN Y E L A+LSP ++S+ ++ D LY + + VL Sbjct: 168 RIKNLITDQRVISGVGNAYSDEILHTARLSPFATSKSISDDH---VDDLY---EATRSVL 221 Query: 226 IDAIDAGGSSLRDYVHIDG-SIGYFQN----AFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + AI+ ++G + ++ V+ +TG PC CG +R + A RS Sbjct: 222 LGAIE----------RLEGQEVARLKSEKRTGLRVHARTGMPC-PVCGDTVREVSFADRS 270 Query: 281 TFYCTYCQ 288 YC CQ Sbjct: 271 FQYCPTCQ 278 >gi|317047339|ref|YP_004114987.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] gi|316948956|gb|ADU68431.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] Length = 262 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 51/301 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L M +TD+ F FP + A G + + R K Sbjct: 1 MPEGPEIRRAADQLAAAMTGKPLTDVW-------FAFPQLKTYEPALLGATVTAIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYN 117 LL L++ H + G + + T A PQ + + L N T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVPTGTA-----PQTARQLRVRLANVDQTI---LLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALL 172 ++L+ +P L+ +GP+ D S L+ +F ++ LL Sbjct: 106 ASD----IELLNAETLATHPFLQRVGPDVLDASLTVEAVQERLLSPRFRRRQ--FSGLLL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN E LW A+L + + R+L D+ IQ + + L+ Sbjct: 160 DQAFLAGLGNYLRVEILWHAQL--LAQHRAL--------DLHAAQIQALSEALL------ 203 Query: 233 GSSLRDYVHIDGSI-GYFQNA---FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + R + GS+ Y ++A F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 204 -AVPRHSYQMRGSMKKYHEDAAFRFEVFHRQGKKC-RRCGTLIEKGVLSSRPFYWCPGCQ 261 Query: 289 K 289 + Sbjct: 262 R 262 >gi|213023617|ref|ZP_03338064.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 61 Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +C Sbjct: 1 SIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHC 59 Query: 288 QK 289 QK Sbjct: 60 QK 61 >gi|323967463|gb|EGB62882.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli M863] gi|327254388|gb|EGE66010.1| endonuclease VIII [Escherichia coli STEC_7v] Length = 263 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D + L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEAAKERLLSPRF--RNRQFAGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+ L+ K + L N D L + EI ++ Sbjct: 161 QAFLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRL--------S 209 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 210 YATRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|84497372|ref|ZP_00996194.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84382260|gb|EAP98142.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 297 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 32/257 (12%) Query: 47 GKKIIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVT 100 G+ D K+LL+ + L+ +HL M G+F + A + P H +V Sbjct: 38 GRVFADAQAVGKHLLVTAHDVGLTAHLHLAMDGAFSVRRHHRALHGDFPRTEPPVHGNVA 97 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT-LGPEPADNSFNAIYLTHQ 159 L + T+ + DP +D E + LR LGP+P + + Sbjct: 98 WRLLSATHHGEL----TDPAVCELLD--EDGVLA----LRARLGPDPLRDDAEPDVARRR 147 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + +++QK++AGIGN+Y E L RA+L P R + + L Q Sbjct: 148 IQNSRRPIGALIIDQKVIAGIGNVYRAEILHRARLDPFTPGREI------DDETFGALWQ 201 Query: 220 EIQKVLIDAIDAGG--------SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 + ++I + AG ++ R+ + + + ++VYG+ G PC S CG + Sbjct: 202 DTVDLMILGLGAGWIVTDEAQMAAAREALVRGERVPRWPKRYAVYGRAGTPC-SVCGTTV 260 Query: 272 RRIVQAGRSTFYCTYCQ 288 R + F+C CQ Sbjct: 261 RAQRVGLQRLFWCPGCQ 277 >gi|149186671|ref|ZP_01864982.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] gi|148829579|gb|EDL48019.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] Length = 260 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPE E R L + T+ + L + P + A G++ + R K Sbjct: 1 MPELPENEAQRLTLERECLHRTIEAVELGEDVTYIELPGDNERARLVGRQFTETRRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + VHLGM+G + P H + I + R+ + P Sbjct: 61 IFAGSKTGPWMTVHLGMTGKLVPFDAP----DDPPDHTKLLIRFEGD-----RRLAFQCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ G + +++ Y LGP+ + S T F S +K+AL+ Q +AG Sbjct: 112 RKLGHVRVIDDPASYLED--EGLGPDALEVSCEQFVQT--FGSTRSAIKSALMKQDKMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN++ E L++ + P + N +D+L + ++++ L+ Sbjct: 168 IGNLWSDETLFQTGIHPEARA------NALGEDVLSDIHAAMRRI-----------LKGV 210 Query: 240 VHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V ++ S A+ + + K+G C CG I GR+ ++C QK Sbjct: 211 VRVEASYEDLPEAWLIRHRKSGAEC-RRCGGTIVSTKVGGRTAYFCDKHQK 260 >gi|323163870|gb|EFZ49680.1| endonuclease VIII [Shigella sonnei 53G] Length = 263 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|91209750|ref|YP_539736.1| endonuclease VIII [Escherichia coli UTI89] gi|117622911|ref|YP_851824.1| endonuclease VIII [Escherichia coli APEC O1] gi|218557634|ref|YP_002390547.1| endonuclease VIII [Escherichia coli S88] gi|218688511|ref|YP_002396723.1| endonuclease VIII [Escherichia coli ED1a] gi|237707322|ref|ZP_04537803.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|306812874|ref|ZP_07447067.1| endonuclease VIII [Escherichia coli NC101] gi|122424567|sp|Q1REK9|END8_ECOUT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|166920091|sp|A1A8X0|END8_ECOK1 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741110|sp|B7MFX3|END8_ECO45 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783122|sp|B7MPL0|END8_ECO81 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|91071324|gb|ABE06205.1| endonuclease VIII [Escherichia coli UTI89] gi|115512035|gb|ABJ00110.1| endonuclease VIII [Escherichia coli APEC O1] gi|218364403|emb|CAR02082.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218426075|emb|CAR06892.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|226898532|gb|EEH84791.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|294491202|gb|ADE89958.1| endonuclease VIII [Escherichia coli IHE3034] gi|305853637|gb|EFM54076.1| endonuclease VIII [Escherichia coli NC101] gi|307627868|gb|ADN72172.1| endonuclease VIII [Escherichia coli UM146] gi|315287170|gb|EFU46582.1| zinc finger found in FPG and IleRS [Escherichia coli MS 110-3] gi|320194126|gb|EFW68758.1| Endonuclease VIII [Escherichia coli WV_060327] gi|323952724|gb|EGB48592.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H252] gi|323958461|gb|EGB54167.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H263] gi|324006240|gb|EGB75459.1| zinc finger found in FPG and IleRS [Escherichia coli MS 57-2] Length = 263 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D ++ Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLDTPRLSYAT 212 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 213 -RGQVDENKYHGALFR-FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|294631793|ref|ZP_06710353.1| endonuclease VIII [Streptomyces sp. e14] gi|292835126|gb|EFF93475.1| endonuclease VIII [Streptomyces sp. e14] Length = 281 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 43/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPE V R L + +T R DF P + + G+ +++ R K Sbjct: 1 MPEGDTVWQAARRLHEALAGRVLT---------RSDFRVPQYATVDLSGRTVLNTIARGK 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL +EG L++ HL M G++ + + + P H + T YR+ Sbjct: 52 HLLTRVEGGLTLHTHLRMEGAWKV-YGDGERWKGGPAHQIRVVLATAERTAVGYRLP--- 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIV 177 ++L+ TS + + + LGP+ ++ + L + L ALL+Q+ + Sbjct: 108 -----VLELLRTSEEDRT--VSHLGPDLLGPDWDPDLALANLLADPARQLGEALLDQRNL 160 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN+Y E + ++P +L + +L K + E R Sbjct: 161 AGIGNVYKSELCFLLGVTPWLPVGALPADRAAKLPLLAKKLLEAN--------------R 206 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 D V + + G VYG+ PCL CG +R Q R T++C CQK Sbjct: 207 DRV-VRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGTQERPTYWCPTCQK 260 >gi|323976316|gb|EGB71406.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TW10509] Length = 263 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 40/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRF--RNRQFAGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+ L+ K + L N D L + EI ++ Sbjct: 161 QAFLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRL--------S 209 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 210 YATRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|218704031|ref|YP_002411550.1| endonuclease VIII [Escherichia coli UMN026] gi|293403958|ref|ZP_06647952.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298379734|ref|ZP_06989339.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300900708|ref|ZP_07118857.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] gi|226741114|sp|B7N9V3|END8_ECOLU RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218431128|emb|CAR12004.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|291428544|gb|EFF01569.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298279432|gb|EFI20940.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300355767|gb|EFJ71637.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] Length = 263 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLSAAQLDALAHALLD-IPRLSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|288921551|ref|ZP_06415825.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] gi|288347068|gb|EFC81371.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] Length = 272 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 29/249 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + K+LL+ + + +HLG+ G + + +P V + LT+ Sbjct: 35 GRVLAQAEAYGKHLLLRFDDERVLHIHLGIYGKYQLGPAPAPEPT-----GAVRLRLTSG 89 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T Y D R +L+E L LGP+P + + + + Sbjct: 90 TG-------YADLRGPNACELLEPGEVKAL--LDRLGPDPLRPGADPEPAWRRIGRSRTP 140 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI-QEIQKVL 225 + L++Q +VAG GNIY E L+RA + P R L + ++LI ++ +++ Sbjct: 141 VAQLLMDQAVVAGPGNIYRAEVLFRAGVDPYLPGRDLTRAQ-------WELIWSDLVELM 193 Query: 226 IDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 D + AG H ++G VY + G+ CL C +R A R Sbjct: 194 ADGVRAGRIDTVRPEHTPEAMGRPPRVDEHGGEVYVYRRAGQLCLV-CEAEVRTARLAAR 252 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 253 NLFWCPRCQ 261 >gi|156934788|ref|YP_001438704.1| endonuclease VIII [Cronobacter sakazakii ATCC BAA-894] gi|166920093|sp|A7MQW6|END8_ENTS8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|156533042|gb|ABU77868.1| hypothetical protein ESA_02628 [Cronobacter sakazakii ATCC BAA-894] Length = 263 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 52/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L + +T + F FP F A G ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAVAGKPLTHVW-------FAFPELKAFEAQLTGARVERFETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + K + PQ T SL T+ V+ Sbjct: 54 ALLTHFSCGLTLYSHNQLYGVWRV-----VKAGETPQ---TTRSLRVRLETEDAAVLLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D + + L+ +GP+ D S L+ +FH++ LL+ Sbjct: 106 ASEIEMLDADGVA---AHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQ--FSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW+A+L+P K I+ N T D L + EI ++ +D Sbjct: 161 QAFLAGLGNYLRVEILWQAQLAPRHKA---IELNNTQLDALARACLEIPRLSYQTRGTVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + G+ C CG +I + + R ++C C Sbjct: 218 ENKHHGALFR---------------FEVFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|116621959|ref|YP_824115.1| endonuclease VIII/DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] gi|116225121|gb|ABJ83830.1| endonuclease VIII / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] Length = 250 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 56/252 (22%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + V K+LLI G+L ++ H+ MSGS+ I + + P++ + T+ Sbjct: 44 GRTVEKVEANGKWLLIYFSGDLILLTHMLMSGSWHIYRP--GERWQRPRNEMRIVIETDA 101 Query: 107 TNTKKYRV-------IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTH 158 +RV ++ RR G L LGP +F+A + + Sbjct: 102 MVAVAFRVPVAEFHTAHSLARREG---------------LNQLGPSALAENFDAETAVAN 146 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + + L ALL+Q+++AG+GN++ E + LSP R SL + L +L+ Sbjct: 147 LASRPDLELGLALLDQRLIAGLGNLFKSEVAFACGLSPFRTVASLSRIQ------LEELV 200 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA- 277 +++L + +VYG+ GEPC CG IR Sbjct: 201 TTSRRLL----------------------QARPVPNVYGRAGEPC-RRCGTSIRSAKHRD 237 Query: 278 -GRSTFYCTYCQ 288 GR +F+C CQ Sbjct: 238 DGRVSFWCPVCQ 249 >gi|306780507|ref|ZP_07418844.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|306785259|ref|ZP_07423581.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|306789618|ref|ZP_07427940.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|306793945|ref|ZP_07432247.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|306798339|ref|ZP_07436641.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|306804215|ref|ZP_07440883.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|306808785|ref|ZP_07445453.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|306968617|ref|ZP_07481278.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308326655|gb|EFP15506.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308330081|gb|EFP18932.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308333921|gb|EFP22772.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308337724|gb|EFP26575.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308341405|gb|EFP30256.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308344891|gb|EFP33742.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308349202|gb|EFP38053.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308353823|gb|EFP42674.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] Length = 268 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 36/294 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLAQLHQRRFAGAPVSVSSPQGRFA---DSASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F T A+P L + R++ + FG Sbjct: 58 YVGGPVVHVHLGLYGTF----TEWARPTDG--------WLPEPAGQVRMRMVGAE---FG 102 Query: 124 FMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DL ++ + LGP+P + N + K + L++Q ++ Sbjct: 103 -TDLRGPTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVI 161 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK-DILYKLIQEIQKVLIDAIDAGGSSL 236 AG+GN+Y E L+R ++ P R R + G P+ D + + + KV + G + Sbjct: 162 AGVGNVYRNELLFRHRIDPQRPGRGI----GEPEFDAAWNDLVSLMKV---GLRRGKIIV 214 Query: 237 RDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 215 VRPEHDHGLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|76664685|emb|CAJ17783.1| formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma solani] Length = 161 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 11/139 (7%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 GK I+D+ R+ K+LL L NL +I H M G I+ + K+ +H H + L +N Sbjct: 34 GKNILDIQRKGKFLLFFLTKNLVLIGHSRMEGKLFIQ----PRQKKHEKHEHFVLFLNDN 89 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T+ + Y D R+FG ++ L L +P + Y + K + Sbjct: 90 TSLR-----YYDFRKFGRFEVHHQKDFLTKTNLYKLALDPFEIDLMTFY--RKIIKTKTA 142 Query: 167 LKNALLNQKIVAGIGNIYV 185 LK LLNQ I++G+GNIYV Sbjct: 143 LKTVLLNQNIISGLGNIYV 161 >gi|253798457|ref|YP_003031458.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289553745|ref|ZP_06442955.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|297635070|ref|ZP_06952850.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732061|ref|ZP_06961179.1| DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659397|ref|ZP_07816277.1| DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319960|gb|ACT24563.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289438377|gb|EFD20870.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|328458225|gb|AEB03648.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 268 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 36/294 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFA---DSASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F T A+P L + R++ + FG Sbjct: 58 YVGGPVVHVHLGLYGTF----TEWARPTDG--------WLPEPAGQVRMRMVGTE---FG 102 Query: 124 FMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DL ++ + LGP+P + N + K + L++Q ++ Sbjct: 103 -TDLRGPTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVI 161 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK-DILYKLIQEIQKVLIDAIDAGGSSL 236 AG+GN+Y E L+R ++ P R R + G P+ D + + + KV + G + Sbjct: 162 AGVGNVYRNELLFRHRIDPQRPGRGI----GEPEFDAAWNDLVSLMKV---GLRRGKIIV 214 Query: 237 RDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 215 VRPEHDHGLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|332671950|ref|YP_004454958.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] gi|332340988|gb|AEE47571.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] Length = 308 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 13/154 (8%) Query: 142 LGPEPAD-NSFNAI--YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+PA + +A + + + + L++Q +VAGIGNIY E L+RA+L P Sbjct: 162 LGPDPASTDDLDAAQEVVVQRVTSRTVAVGQLLMDQSVVAGIGNIYRAELLFRARLDPHT 221 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSV 255 R + P D++ L ++ +L D I G R+ + +G ++ + V Sbjct: 222 PGRRV------PPDVVRALWRDWVVLLDDGIRVGAMITREDLDAEGRAQALADPRQRHWV 275 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ G PC CG + A R ++C CQ+ Sbjct: 276 YGRAGLPC-RVCGTPVIVEEMATRKLYHCPVCQR 308 >gi|260903954|ref|ZP_05912276.1| formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 281 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 41/297 (13%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + L +V + +T TDI D P A G +I VSR K Sbjct: 1 MPELPEVDALVTFLRPRIVGEFVTRTDIGELSILKTADPPLE---ALNGLEITGVSRVGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI---KNPQHNHVTISLTNNTNTKKYRVI 115 L++ +G L ++ +G + P+ K P + ++ + + + Sbjct: 58 SLIVAFDG-LELVCRFARAGWLVWHELVPTGPVRMGKGPLALRLHLA-----SGAGFDIS 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++ LV + + P + GP+ S +A T + +K L +Q Sbjct: 112 EAGTKKNAAASLVAD--RSEVPAIANAGPDAL--SIDAAEFTATLAGSTARIKTVLEDQS 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI----QKVLIDAIDA 231 +++GIGN Y E L A+LSP NG L I+E+ ++ LID A Sbjct: 168 LISGIGNAYSDEILHTAQLSP------FATANGVDAPSLLDTIREVLGHAREALIDLPPA 221 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + F V+G+TG+ C CG I + + +S YC CQ Sbjct: 222 KVKAAK------------KRGFRVHGRTGKTC-PVCGSTIAEVSYSDKSLQYCPGCQ 265 >gi|331662067|ref|ZP_08362990.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] gi|331060489|gb|EGI32453.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] Length = 263 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 42/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG--- 232 +AG+GN E LW+ L+ K + L I + +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDLSAAQLDALADALLDIPRLSYATRGQVDENKHH 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 223 GALFR---------------FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|31789403|gb|AAP58519.1| putative formamidopyrimidine-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 41/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+VE+ L + + + L L A + + + R K + Sbjct: 1 MPELPDVELYLDALRRRIVGQPLESVRLASPFLVRSIDPPLDRAV-NRVVRGLRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 + EL+G+L I++HL ++G F + P K + T+ LT + ++ + Sbjct: 60 VWELDGDLFIVIHLMIAGRFRWKERGAGIPGKIGLAAFDFPNGTLLLTEAGSKRQASL-- 117 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + E +L P G EP D S ++N +K +L + + Sbjct: 118 -------HVAAGERALASHDPG----GIEPLDASLE--QFAQVLRRENHTIKRSLTDPHL 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++GIGN Y E L A++SP++ T + I+ + ID + SS Sbjct: 165 LSGIGNAYSDEILHAARMSPMKLTSQMGDAE----------IERLYAATIDTL----SSW 210 Query: 237 RDYVHIDGS------IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R + ++ + F++ +V+G+ G+PC C ++RI A YC CQ Sbjct: 211 RQRLLVETGDNFPEKVTAFRDGMAVHGRYGKPC-PVCEDPVQRIRYAANEANYCPTCQ 267 >gi|295838891|ref|ZP_06825824.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295827240|gb|EDY42376.2| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 271 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++QKIVAG+GN+Y EAL+R + P R R Sbjct: 122 LGPDPLREADDGEAAWTRIARSRTTIAALLMDQKIVAGVGNVYRAEALFRHGIDPDRPGR 181 Query: 202 SLIQNNGTPKDILYKLIQEIQK--VLIDAIDAGGSSLRDYVHIDGSIGY------FQNAF 253 SL + T D L+ ++ + + V + ID ++R H ++G Sbjct: 182 SLTR---TEWDALWADLRALMREGVRLGRID----TVRPE-HTPEAMGRPPRRDDHGGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + +PCL CG IR AGR+ F+C CQ Sbjct: 234 YVYRRAHQPCLI-CGTEIRTRELAGRNLFWCPRCQ 267 >gi|50843091|ref|YP_056318.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840693|gb|AAT83360.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|313763490|gb|EFS34854.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313773644|gb|EFS39610.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313793880|gb|EFS41904.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801271|gb|EFS42522.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313811479|gb|EFS49193.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313816671|gb|EFS54385.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829499|gb|EFS67213.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313831220|gb|EFS68934.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834242|gb|EFS71956.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|313840005|gb|EFS77719.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914787|gb|EFS78618.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314919394|gb|EFS83225.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] gi|314920697|gb|EFS84528.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930576|gb|EFS94407.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954467|gb|EFS98873.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957541|gb|EFT01644.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314974096|gb|EFT18192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976613|gb|EFT20708.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314984276|gb|EFT28368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|315079612|gb|EFT51605.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315081156|gb|EFT53132.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315095440|gb|EFT67416.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|315099117|gb|EFT71093.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100398|gb|EFT72374.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315106907|gb|EFT78883.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] gi|315109097|gb|EFT81073.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327328501|gb|EGE70263.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327444288|gb|EGE90942.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444832|gb|EGE91486.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327452092|gb|EGE98746.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327454870|gb|EGF01525.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457846|gb|EGF04501.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755298|gb|EGF68914.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758221|gb|EGF71837.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] gi|328759936|gb|EGF73520.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] Length = 299 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 39/299 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P +PE +I R + + + + RF +A G + K+L+ Sbjct: 26 PTVPEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLV 82 Query: 62 IELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ + + + +HLG+ G +E T P V + +T+ R Sbjct: 83 VDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQVRLRITDGVTAADLR----G 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P+ ++ E T+GP+P + + + + + + + LL+Q++ A Sbjct: 132 PQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAA 186 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------D 230 G+GNIY E L+R ++ P + + + D++ + ++ ID + + Sbjct: 187 GVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPE 246 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A G R + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 247 AMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 296 >gi|315443627|ref|YP_004076506.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315261930|gb|ADT98671.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 264 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 23/249 (9%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + A G+ + + K+L +G + VHLG+ GSF P+ + V Sbjct: 36 ATAVNGRVLKKATAWGKHLFHHYDGGRVVHVHLGLYGSFTEWPLPPLLPVGQVRMRMVGT 95 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + ++P D+V LGP+P + + + Sbjct: 96 EYGADLRGPTVCEVIDEPE---IADIVAR-----------LGPDPLRPDADPSLAWRRIN 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K + L++Q ++AGIGN+Y E L+R + P R S+ N D L+ + + Sbjct: 142 KSRRPIGALLMDQSVIAGIGNVYRSELLFRHRTDPFRPGTSVTANE---FDALWTDLVAL 198 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGR 279 KV + G + H G+ Y + VY + G+PC C +R + R Sbjct: 199 MKV---GVRRGKIVVVLPEHDHGAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEAR 254 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 255 NLFWCPNCQ 263 >gi|226307305|ref|YP_002767265.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226186422|dbj|BAH34526.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 265 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + L++ VHLG+ G F T A P++ P + R++ Sbjct: 51 GKHLWHTYDNGLTVHVHLGLYGKF----TDSALPMEEP------------VGQVRMRMVG 94 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT-----LGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 D FG T+ + PP LGP+P + + K + L Sbjct: 95 AD---FGTDLRGPTACEVLLPPQVAAIEARLGPDPLRRGADPHQAWVRISKSKKAIGALL 151 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q ++AG+GN+Y E L+R +SP R + + T ++ + E+ KV + Sbjct: 152 MDQAVLAGVGNVYRAELLFRHGISPERPGNLISHDEWT---AMWADLVELMKV---GVRR 205 Query: 232 GGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + H +G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 206 GKMHVVRAEHDNGDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMEARNLFWCPVCQ 263 >gi|313819617|gb|EFS57331.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] gi|313822058|gb|EFS59772.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823706|gb|EFS61420.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313826029|gb|EFS63743.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] gi|314924755|gb|EFS88586.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314961957|gb|EFT06058.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314978934|gb|EFT23028.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314986623|gb|EFT30715.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990979|gb|EFT35070.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315083619|gb|EFT55595.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087041|gb|EFT59017.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089216|gb|EFT61192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|327329636|gb|EGE71392.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|328752463|gb|EGF66079.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|332676015|gb|AEE72831.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 299 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 39/299 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P +PE +I R + + + + RF +A G + K+L+ Sbjct: 26 PTVPEGHVIHRLANAIGLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLV 82 Query: 62 IELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ + + + +HLG+ G +E T P V + +T+ R Sbjct: 83 VDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQVRLRITDGVTAADLR----G 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P+ ++ E T+GP+P + + + + + + + LL+Q++ A Sbjct: 132 PQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAA 186 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------D 230 G+GNIY E L+R ++ P + + + D++ + ++ ID + + Sbjct: 187 GVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPE 246 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A G R + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 247 AMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 296 >gi|126433893|ref|YP_001069584.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|126233693|gb|ABN97093.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 257 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 35/289 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + R + + + L R ++R PH+ + G + +V R K+L I Sbjct: 1 MPEGDTVYRTATALREGLVGK--TLTRCDVRV--PHYATVDLTGHVVDEVLSRGKHLFIR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYNDPRR 121 + G SI HL M GS+ + P P + I L + + D Sbjct: 57 V-GPASIHSHLKMEGSWKV------VPASRPSRAGYRIRIILEAGEGEQAVQAAGID--- 106 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGI 180 G ++++E + + LGP+ + + + L ALL+Q+++AG+ Sbjct: 107 LGVLEILERD--HDMETVAHLGPDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAGV 164 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A P R L KD L +++Q + +L S Sbjct: 165 GNVYANELCFVAGHLPTAPVRDL-------KDPL-RMVQRARDMLW----LNRSRWNRTT 212 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 213 TGDARPG---RDVWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|284920492|emb|CBG33554.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli 042] Length = 263 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLEPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLSAAQLDALAHALLD-IPRLSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|120437537|ref|YP_863223.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] gi|117579687|emb|CAL68156.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] Length = 293 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 55/301 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---------PHHFSAATRGKKII 51 MPELPEV + + V LH K ++ D F A + + Sbjct: 34 MPELPEV---------AYQKIYVDSTSLHHKIVKVDMGADKIFQSPKSEFEATLLKNEFV 84 Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 ++ KYLL++L+ ++VH GM+G +H K H ++LT K Sbjct: 85 SSTQIGKYLLLKLKEKGYLVVHFGMTGKMDYFQHDEIQK--------HAQLTLTFEDGGK 136 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V PR+FG L T+ ++ + LGP + S + + F K ++K A Sbjct: 137 LSFVC---PRKFG--KLFLTTSPDEFRKKQKLGPHATEISEEDFH--NLFDGKRGSVKTA 189 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDA 228 L++Q +AG+GN+YV E L+++ + P K+ +L + KD+ ++K + I + + + Sbjct: 190 LMDQSFIAGLGNLYVDEILFQSGIHPKSKSENL-----SDKDLSNMFKNMVAILETVTKS 244 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ + D Y +N + GE C G+ I+ I GRST++C+ CQ Sbjct: 245 -KTEGNPIPD--------TYLRN----HRNEGEACPIAKGK-IKMIKVGGRSTYFCSECQ 290 Query: 289 K 289 + Sbjct: 291 E 291 >gi|269795741|ref|YP_003315196.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097926|gb|ACZ22362.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 351 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 30/173 (17%) Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R LGP+P + + S + L+NQ +VAG+GNIY E L+RA+ SP Sbjct: 182 RRLGPDPLRGDADPERFVAAVRRSRSAVGLLLMNQDVVAGVGNIYRAEVLFRAEQSPTTP 241 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG------SSLRDYVH------------ 241 R + P ++L + ++ ++ D G D H Sbjct: 242 GRDV------PAEVLRAMWDDLVVLMADGAAIGAIVTTRPGDRGDGAHPADEKAPGRRRV 295 Query: 242 ---IDGSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G +F VY + G+PC C + R AGR+ F+C CQ+ Sbjct: 296 RQNTDAEPGAVPRDESFYVYQRDGQPC-RVCRTEVARAEMAGRNLFWCPTCQR 347 >gi|15609601|ref|NP_216980.1| DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15841988|ref|NP_337025.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31793645|ref|NP_856138.1| DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638347|ref|YP_978571.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662299|ref|YP_001283822.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148823664|ref|YP_001288418.1| DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969788|ref|ZP_02552065.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404400|ref|ZP_03416581.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412221|ref|ZP_03420983.1| DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215427847|ref|ZP_03425766.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431410|ref|ZP_03429329.1| DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215446710|ref|ZP_03433462.1| DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754195|ref|ZP_03532991.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558461|ref|ZP_03537537.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|224990841|ref|YP_002645528.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232598|ref|ZP_04925925.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|254365240|ref|ZP_04981286.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254551512|ref|ZP_05141959.1| putative DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187470|ref|ZP_05764944.1| putative DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260201589|ref|ZP_05769080.1| putative DNA glycosylase [Mycobacterium tuberculosis T46] gi|260205768|ref|ZP_05773259.1| putative DNA glycosylase [Mycobacterium tuberculosis K85] gi|289443990|ref|ZP_06433734.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448107|ref|ZP_06437851.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289570619|ref|ZP_06450846.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289575158|ref|ZP_06455385.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289746246|ref|ZP_06505624.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289751070|ref|ZP_06510448.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289754572|ref|ZP_06513950.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289758596|ref|ZP_06517974.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289762633|ref|ZP_06522011.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|294994428|ref|ZP_06800119.1| putative DNA glycosylase [Mycobacterium tuberculosis 210] gi|298525942|ref|ZP_07013351.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|306776734|ref|ZP_07415071.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|306972844|ref|ZP_07485505.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|307080550|ref|ZP_07489720.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|307085148|ref|ZP_07494261.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|54040502|sp|P64159|Y2491_MYCBO RecName: Full=Putative DNA glycosylase Mb2491c; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb2491c; Short=Putative AP lyase Mb2491c gi|54042831|sp|P64158|Y2464_MYCTU RecName: Full=Putative DNA glycosylase Rv2464c/MT2539; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv2464c/MT2539; Short=Putative AP lyase Rv2464c/MT2539 gi|2791504|emb|CAA16041.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium tuberculosis H37Rv] gi|13882263|gb|AAK46839.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619238|emb|CAD97352.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium bovis AF2122/97] gi|121493995|emb|CAL72472.1| Possible dna glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601657|gb|EAY60667.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|134150754|gb|EBA42799.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|148506451|gb|ABQ74260.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148722191|gb|ABR06816.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis F11] gi|224773954|dbj|BAH26760.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416909|gb|EFD14149.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421065|gb|EFD18266.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289539589|gb|EFD44167.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289544373|gb|EFD48021.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289686774|gb|EFD54262.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289691657|gb|EFD59086.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289695159|gb|EFD62588.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710139|gb|EFD74155.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|289714160|gb|EFD78172.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298495736|gb|EFI31030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|308214894|gb|EFO74293.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308357772|gb|EFP46623.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308361717|gb|EFP50568.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|308365327|gb|EFP54178.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|323718970|gb|EGB28120.1| DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904078|gb|EGE51011.1| DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 268 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 36/294 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFA---DSASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F T A+P L + R++ + FG Sbjct: 58 YVGGPVVHVHLGLYGTF----TEWARPTDG--------WLPEPAGQVRMRMVGAE---FG 102 Query: 124 FMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DL ++ + LGP+P + N + K + L++Q ++ Sbjct: 103 -TDLRGPTVCESIDDGEVADVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVI 161 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK-DILYKLIQEIQKVLIDAIDAGGSSL 236 AG+GN+Y E L+R ++ P R R + G P+ D + + + KV + G + Sbjct: 162 AGVGNVYRNELLFRHRIDPQRPGRGI----GEPEFDAAWNDLVSLMKV---GLRRGKIIV 214 Query: 237 RDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 215 VRPEHDHGLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|289426532|ref|ZP_06428275.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|295131139|ref|YP_003581802.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] gi|289153260|gb|EFD01978.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|291375877|gb|ADD99731.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] Length = 272 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 36/259 (13%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 +A G + K+L+++ + + + +HLG+ G +E T P Sbjct: 36 AAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQ 88 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 V + +T+ R P+ ++ E T+GP+P + + Sbjct: 89 VRLRITDGVTAADLR----GPQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWD 139 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYK 216 + + + + + LL+Q++ AG+GNIY E L+R ++ P + + + D++ Sbjct: 140 KVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVML 199 Query: 217 LIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 + ++ ID + +A G R + + VY + +PCL C Sbjct: 200 MRAGVESGRIDTVQPEHTPEAMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTP 250 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + Q GR F+C CQ+ Sbjct: 251 VRMVAQGGRHLFWCPRCQR 269 >gi|191167209|ref|ZP_03029028.1| endonuclease VIII [Escherichia coli B7A] gi|193070644|ref|ZP_03051581.1| endonuclease VIII [Escherichia coli E110019] gi|256021212|ref|ZP_05435077.1| endonuclease VIII [Shigella sp. D9] gi|260853949|ref|YP_003227840.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260866845|ref|YP_003233247.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|309797426|ref|ZP_07691818.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|332282439|ref|ZP_08394852.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] gi|190902757|gb|EDV62487.1| endonuclease VIII [Escherichia coli B7A] gi|192956032|gb|EDV86498.1| endonuclease VIII [Escherichia coli E110019] gi|257752598|dbj|BAI24100.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257763201|dbj|BAI34696.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|308118950|gb|EFO56212.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|323153773|gb|EFZ40020.1| endonuclease VIII [Escherichia coli EPECa14] gi|323180049|gb|EFZ65605.1| endonuclease VIII [Escherichia coli 1180] gi|332104791|gb|EGJ08137.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] Length = 263 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERVLSPRFRNRQFAGLLLEQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|240170935|ref|ZP_04749594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 27/253 (10%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +AA G+ + S K+L G + VHLG+ G+F A P+ P V + Sbjct: 36 AAAVDGRVLRRTSVWGKHLFHHYSGGGIVHVHLGLYGAFTEWERPAADPLPEPV-GQVRM 94 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +D R ++++ S + + LGP+P + + + Sbjct: 95 RMVGAA-------FGSDLRGPTVCEVIDESQVAEV--VARLGPDPLRRDADPSWAWARIM 145 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQ 219 K + L++Q ++AG+GN+Y E L+R ++ P R + + + D++ + Sbjct: 146 KSRRPIGALLMDQTVMAGVGNVYRSELLFRHRIDPYRAGQRITEAEFAAAWTDLVALMKV 205 Query: 220 EIQKVLIDAI----DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +++ I A+ D G S R D Y VY + G+PC C +R Sbjct: 206 GLRRGKIIAVRPEHDHGAPSYRP----DRPRTY------VYRRAGDPC-RLCATTVRTAE 254 Query: 276 QAGRSTFYCTYCQ 288 GR+ F+C CQ Sbjct: 255 LEGRNLFWCPTCQ 267 >gi|170768967|ref|ZP_02903420.1| endonuclease VIII [Escherichia albertii TW07627] gi|170122039|gb|EDS90970.1| endonuclease VIII [Escherichia albertii TW07627] Length = 263 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKLYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSDGLTLYSHNQLYGVWRVADTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + + +N LL+Q Sbjct: 107 SD----IEMLTAEQLTAHPFLQRVGPDVLDPNLTSEMVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D+L + +I ++ + Sbjct: 163 FLAGLGNYLRVEILWQIGLTGRHKAKDL---NAQQLDVLSHALLDIPRL--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R V + G F V+ + GE C CG I + + + R ++C CQ+ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGEQC-ERCGSTIEKTMLSSRPFYWCPGCQR 263 >gi|24987423|pdb|1K3W|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Dna gi|24987426|pdb|1K3X|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Brominated-Dna gi|51247247|pdb|1Q39|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The Wt Enzyme At 2.8 Resolution. gi|168988580|pdb|2EA0|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 36/292 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKY 59 PE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGKA 53 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 LLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSAS 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKI 176 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 D----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAF 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 LAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYAT 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 RGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|289428750|ref|ZP_06430433.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] gi|289158148|gb|EFD06368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] Length = 272 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 36/259 (13%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 +A G + K+L+++ + + + +HLG+ G +E T P Sbjct: 36 AAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQ 88 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 V + +T+ R P+ ++ E T+GP+P + + Sbjct: 89 VRLRITDGVTAADLR----GPQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWD 139 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYK 216 + + + + + LL+Q++ AG+GNIY E L+R ++ P + + + D++ Sbjct: 140 KVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVML 199 Query: 217 LIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 + ++ ID + +A G R + + VY + +PCL C Sbjct: 200 MRAGVESGRIDTVQPEHTPEAMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTP 250 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + Q GR F+C CQ+ Sbjct: 251 VRMVAQGGRHLFWCPRCQR 269 >gi|198282763|ref|YP_002219084.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667882|ref|YP_002424959.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247284|gb|ACH82877.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520095|gb|ACK80681.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 267 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 28/291 (9%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E++R+ L ++ K + V + + D AA +G+ I D+ R + Sbjct: 1 MAELPEIELLRQKLRRNILHKRVGVMQMQNAKGEALPDGAGIKDAALKGRAITDLHRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL +EL+ + + LG S +E P+ +L N ++ R+ + Sbjct: 61 YLFLELDRKDILALQLGGELSGELERG----PVHGEGGEEPRAALEIQINGQQ-RLRFQG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIV 177 + + +++ + + L LGP+P + L ++ S L+N LL+ Sbjct: 116 TQLGNRLRMLDENSDVDF--LTKLGPDPLMVHGEGLGILREALSRRRSALRNILLDDTFA 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIG I+ E L++A+L P R SL + + +++I KVL A Sbjct: 174 PGIGGIWADEILFQARLRPDRTATSLSEEE------RERFLEQIPKVLDRA--------- 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V F + C S CG + + G++ C CQ Sbjct: 219 --VRCQAKTNLLPKTFLTRHREDGHCPS-CGGALETLSVGGKNAMLCPACQ 266 >gi|327446321|gb|EGE92975.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] Length = 299 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 36/259 (13%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 +A G + K+L+++ + + + +HLG+ G +E T P Sbjct: 63 AAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQ 115 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 V + +T+ R P+ ++ E T+GP+P + + Sbjct: 116 VRLRITDGVTAADLR----GPQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWD 166 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYK 216 + + + + + LL+Q++ AG+GNIY E L+R ++ P + + + D++ Sbjct: 167 KVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVML 226 Query: 217 LIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 + ++ ID + +A G R + + VY + +PCL C Sbjct: 227 MRAGVESGRIDTVQPEHTPEAMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTP 277 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + Q GR F+C CQ+ Sbjct: 278 VRMVAQGGRHLFWCPRCQR 296 >gi|299138806|ref|ZP_07031984.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] gi|298599442|gb|EFI55602.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] Length = 299 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 20/157 (12%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 L LGP+P D H K + + L+ Q +++GIGNIY E L+RA+LSP Sbjct: 149 LARLGPDPLDGDDPKPAFEH-IAKAKTPIGVLLMQQDVLSGIGNIYRAELLFRARLSPFV 207 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG-------GSSLRDYVHIDGSIGYFQN 251 + R+ + K +Q + K I + AG + +D H G + Sbjct: 208 EGRT----------VPMKTLQAMWKDSIPLLRAGMIDRRIVTTKPKDRPHKTGKP-LKEE 256 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 A VY + G+PC CG + R AGR+ ++C CQ Sbjct: 257 AHYVYRRHGKPCFV-CGTKVLRKDVAGRTLYWCPVCQ 292 >gi|145229675|ref|XP_001389146.1| formamidopyrimidine-DNA glycosylase [Aspergillus niger CBS 513.88] gi|134055255|emb|CAK43841.1| unnamed protein product [Aspergillus niger] Length = 375 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 13/216 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T++ + + ++ + F A GKK+ ++ Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRDADTYYYRTDKPGDKEWPPKYWKFLLETEGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNSF-NAIYLTHQFHKKNSNL 167 + D RR G + LV+ + Y PL+ GP+P AD + +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 K LL+Q ++GIGN E L++AK+ P + + +L Sbjct: 181 KALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTL 216 >gi|256396410|ref|YP_003117974.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] gi|256362636|gb|ACU76133.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] Length = 277 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 96/247 (38%), Gaps = 43/247 (17%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L I + I VHLG+ G F H + P P V + + + Sbjct: 57 GKHLFIGFGPDRWIHVHLGLYGKF---HVTEEPP--GPVVGQVRLRMVGKS--------- 102 Query: 117 NDPRRFGFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 G DL S Y P +R LGP+P + + + + Sbjct: 103 ------GHADLRGASACDLYGPEERGALVRRLGPDPLRADADPDLAWRKISNSSLTVAEL 156 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLIDA 228 L+ Q +++G+GN+Y E L+RA L P K R L Q +G D++ + + + ID Sbjct: 157 LMEQPVLSGVGNVYRAEVLYRAGLDPYLKGRDLAREQWDGIWTDLVELMAEGARIGRIDT 216 Query: 229 I------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + +A G R H VY + G+PCL CG + R+ F Sbjct: 217 VWPQHTPEAMGRPPRKDDH--------GGEVYVYRRNGQPCLV-CGTPVATAGVRDRNLF 267 Query: 283 YCTYCQK 289 +C CQK Sbjct: 268 WCPTCQK 274 >gi|296103352|ref|YP_003613498.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057811|gb|ADF62549.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 263 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 52/302 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ +L +K +TD+ F FP F A G+ + + R K Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTDVW-------FAFPQLKPFEAPLVGQTVTHIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL NL++ H + G + + +T+ + PQ V + K ++Y+ Sbjct: 54 ALLTHFSHNLTLYSHNQLYGVWRVVNTN-----EQPQTTRVLRVRLQTAD--KAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D N A L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLLTHPFLQRVGPDVLDMRLTANDVKARLLSPKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW L+ K L + ++L + +I ++ ++D Sbjct: 161 QAFLAGLGNYLRVEILWEVGLAAQHKASQLSDDQ---LEVLSHALLDIPRLSYNTRGVVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + G+ C CG +I + + R ++C C Sbjct: 218 DNKHHGALFR---------------FKVFHRAGKRC-ERCGGVIEKTTLSSRPFYWCPGC 261 Query: 288 QK 289 Q+ Sbjct: 262 QR 263 >gi|314963764|gb|EFT07864.1| formamidopyrimidine-DNA glycosylase protein [Propionibacterium acnes HL082PA1] Length = 299 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 39/299 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P +PE +I R + + + + RF +A G + K+L+ Sbjct: 26 PTVPEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLV 82 Query: 62 IELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ + + + +HLG+ G +E T P V + +T+ R Sbjct: 83 VDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQVRLRITDGVTAADLR----G 131 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 P+ ++ E T+GP+P + + + + + + LL+Q++ A Sbjct: 132 PQTCELINDDEWGTVAA-----TIGPDPIRDDAGPDVAWDKVRRSSRRISDVLLDQRVAA 186 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------D 230 G+GNIY E L+R ++ P + + + D++ + ++ ID + + Sbjct: 187 GVGNIYRAEVLFRHRVDPATPGKQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPE 246 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A G R + + VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 247 AMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 296 >gi|319442470|ref|ZP_07991626.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium variabile DSM 44702] Length = 277 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 103/259 (39%), Gaps = 39/259 (15%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + D K+L + ++ +HLG+ G+ E P+ P+ V + + ++ Sbjct: 41 GSVLTDAEAWGKHLFVHFTAG-TVHIHLGLIGTLQFE------PLAVPR-GQVRLRIADD 92 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSL---KYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T R P+R + VE K PLR +G NA L K Sbjct: 93 TVAADLR----GPQRCALVTPVEEDAAVAKLGVDPLRVVGGGTPAGELNARKLETALAKT 148 Query: 164 NSNLKNA---LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + K L++Q + AG+G+IY E L+R + P R +SL + + Sbjct: 149 RRSSKPVGALLMDQALYAGVGSIYRTEVLFRLGIDPTRPGKSLTTAE----------LDD 198 Query: 221 IQKVLIDAIDAGGSSLR-DYV---HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQM 270 I ++D + G + R D V H ++G VY + G PCL CG Sbjct: 199 IWSDMVDLMTYGEVAGRIDTVRPEHTPEAMGRPPRKDDHGGEVYVYRRAGLPCLV-CGTP 257 Query: 271 IRRIVQAGRSTFYCTYCQK 289 + AGR ++C CQ+ Sbjct: 258 VETGEMAGRKIYWCPVCQR 276 >gi|183983786|ref|YP_001852077.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177112|gb|ACC42222.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 268 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 19/249 (7%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + A G+ + S K+L G + VHLG+ G+F S + + +P V + Sbjct: 36 AGAVDGRVLRAASAWGKHLFHHYAGGPVVHVHLGLYGAFTEWARSAGELLPDPV-GQVRM 94 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +Y P +D + + L LGP+P + + + Sbjct: 95 RMVG----AEYGTDLRGPTVCEVIDDAQVADV-----LARLGPDPLRKDADPSWAWARIA 145 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K + L++QK++AG+GN+Y E L+R ++ P R + + + ++ Sbjct: 146 KSRRPIGALLMDQKVMAGVGNVYRSELLFRHRIDPYRSGQRITEAE------FSAAWTDL 199 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGR 279 ++ + G + H G+ Y VY + G+PC CG + V GR Sbjct: 200 VALMKVGLRGGKIVVVRPEHDHGAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVLEGR 258 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 259 NVFWCPSCQ 267 >gi|146310878|ref|YP_001175952.1| endonuclease VIII [Enterobacter sp. 638] gi|166920092|sp|A4W871|END8_ENT38 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|145317754|gb|ABP59901.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 263 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 52/302 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ +L +K +T N F FP F ++ G+K+ + R K Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLT-------NAWFAFPQLKSFESSLIGQKVTQIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL NL++ H + G + + ++PQ + + + K ++Y+ Sbjct: 54 ALLTHFSHNLTLYSHNQLYGVWRVVDAG-----EHPQTSRILRVRLQTAD--KAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D A L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLLTHPFLQRVGPDVLDMRLTAEEVKARLLSPKF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW L+ RK L + D L + EI ++ ++D Sbjct: 161 QAFLAGLGNYLRVEILWEVGLAAQRKASQLSEEQ---LDALSHALLEIPRLSYNTRGVVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + G+ C CG +I R + R + C C Sbjct: 218 DNKHHGALFR---------------FKVFHREGKAC-ERCGGVIERSTLSSRPFYGCPVC 261 Query: 288 QK 289 QK Sbjct: 262 QK 263 >gi|260597118|ref|YP_003209689.1| endonuclease VIII [Cronobacter turicensis z3032] gi|260216295|emb|CBA29259.1| Endonuclease 8 [Cronobacter turicensis z3032] Length = 263 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 40/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L + + +T + F FP F A G ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAVADKPLTHVW-------FAFPELKAFEAPLTGARVERFETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + K + PQ T SL T+ V+ Sbjct: 54 ALLTHFSCGLTLYSHNQLYGVWRV-----VKAGETPQ---TTRSLRVRLETEDAAVLLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 +D + + L+ +GP+ D S L+ +FH++ LL+ Sbjct: 106 ASEIEMLDADGVA---AHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQ--FSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+A+L+P K I+ N D L + EI ++ + G Sbjct: 161 QAFLAGLGNYLRVEILWQAQLAPRHKA---IELNNMQLDALARACLEIPRL---SYQTRG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + H G++ F+ V+ + G+ C CG +I + + R ++C CQ Sbjct: 215 TVDENKHH--GALFRFE----VFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|170781889|ref|YP_001710221.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156457|emb|CAQ01605.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 329 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%) Query: 142 LGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LGP+P + + T KK + + L++Q +V+GIGN+Y E L+RA+ +P Sbjct: 184 LGPDPLVDGGTRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAELLFRARQNPHTP 243 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH---IDGSIGYFQNAFSVY 256 R + P+D++ L ++ K+L ++ G D + +D ++ + VY Sbjct: 244 GRDV------PEDVVRGLWRDWSKLLRKGVEVGQMMTMDGLRGKKLDAALRNRADRHWVY 297 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G PC CG + AGR ++C YCQ Sbjct: 298 HREGLPC-RVCGTNVVMEEAAGRKLYWCPYCQ 328 >gi|148272640|ref|YP_001222201.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830570|emb|CAN01505.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 329 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 12/152 (7%) Query: 142 LGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LGP+P + T KK + + L++Q +V+GIGN+Y E L+RA+ +P Sbjct: 184 LGPDPLVDGGKRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAELLFRARQNPHTP 243 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV---HIDGSIGYFQNAFSVY 256 R + P+D++ L ++ K+L ++ G D + +D ++ + VY Sbjct: 244 GRDV------PEDVVRGLWKDWSKLLRKGVEVGQMMTMDGLRGKRLDAALRNRADRHWVY 297 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G PC CG I AGR ++C YCQ Sbjct: 298 HREGLPC-RVCGTNIVMEEAAGRKLYWCPYCQ 328 >gi|323359769|ref|YP_004226165.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276140|dbj|BAJ76285.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 330 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 61/296 (20%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGM------SGSFIIEHTSCAKPIKNPQHNHVT 100 G++ IDV K + + EG++ + VHLGM SG ++ T + + N Sbjct: 41 GRETIDVRAVGKQMFLAFEGDMWLRVHLGMYGAWDFSGEVAVDATIASANGRMGHTNQRG 100 Query: 101 ISLTN----NTNTKKYRVIYNDPRRFGF-MDLVETSLKYQ--YPP--------------- 138 L + + + PRR M T L+ Q +PP Sbjct: 101 TVLDDAPILDAAGENSLSSIGAPRRARVRMSEQTTGLEEQTEWPPPIVGAVRLRLLTEST 160 Query: 139 ---------------------LRTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + LGP+P D S T KK + + L++Q Sbjct: 161 CADLRGPTACALQSPDEVAATIAKLGPDPLVDDVSEGEERFTATVRKKPTAIGLLLMDQS 220 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGN+Y E L+RA+ +P R + P++++ ++ ++ ++L ++ G Sbjct: 221 VVSGIGNVYRAEILFRARQNPHTPGRDV------PEEVVREMWRDWVRLLSIGVETGQMM 274 Query: 236 LRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D + + ++ + + VY + G PC CG + AGR ++C CQ Sbjct: 275 TMDDLDPEAYRRAMAHRDDRHWVYHRAGLPC-RVCGTTVLMEEAAGRKLYWCPTCQ 329 >gi|239994890|ref|ZP_04715414.1| endonuclease VIII [Alteromonas macleodii ATCC 27126] Length = 273 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 31/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K++ + + L+ ++ G+K++ + R K L Sbjct: 1 MPEGPEIRRAADKVEAVIKDIPLEKVEFGLAQLK-----PYAKQLEGEKVLRMETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LS+ H + G + HT C + + + L T++ ++Y+ Sbjct: 56 ITHFSNGLSMYSHNQLYG---VWHT-CKRNRMPDTTRQLRVGLHTETHSA---ILYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + + T +++P L+ +GP+ +NS + + K N L L+Q+ + Sbjct: 109 ----ISIWPTQTIHEHPFLQRVGPDVLNNSVTEELVLERLRSKAFYNRALSGLYLDQRFM 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG---- 233 AG+GN E L+ A + P K L L L + + + GG Sbjct: 165 AGLGNYLRSEILFAAGVHPSLKPSQLADEQ------LRSLAHHTLTICKRSYETGGYTVY 218 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + LR+ + G + + F V+ + +PC C I+R GR ++C+ CQ Sbjct: 219 TELREVLEAKG-VNFEGTRFMVFDREEQPC-RICATPIKRQTYNGRRFYWCSRCQ 271 >gi|171682424|ref|XP_001906155.1| hypothetical protein [Podospora anserina S mat+] gi|170941171|emb|CAP66821.1| unnamed protein product [Podospora anserina S mat+] Length = 314 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 36/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP----HHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + T+ + F SAA G+K+I + Sbjct: 1 MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE--HTSCAKPIKN---------PQHNHVTISLTN 105 K + L+ +++H GM+G I TS + ++ P++ ++ T Sbjct: 61 GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQTSYSSLYRDTDTRVETWPPKYTKFHLTTTC 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N + V + D RR + LV+ + + PL+ GP+P ++ F Y + Sbjct: 121 NPAVE---VAFTDYRRLARVRLVDCPGAHIRSHAPLKENGPDPVQDTDRFTLAYFQSKCR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + +K LLNQK ++GIGN E L+++++ P +K L LY++I+ + Sbjct: 178 ASRAAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQKCNHLTDAQ---TKTLYEVIRYV 234 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + + L DY H S F+ +S K E G+ + + R++ Sbjct: 235 CQTAVGV-------LGDY-HQFPSDWLFKYRWS---KGSENPTLPGGEPLAHVTVGNRTS 283 Query: 282 FYCTYCQK 289 Y T QK Sbjct: 284 CYATRLQK 291 >gi|218553241|ref|YP_002386154.1| endonuclease VIII [Escherichia coli IAI1] gi|218694137|ref|YP_002401804.1| endonuclease VIII [Escherichia coli 55989] gi|226741112|sp|B7M5M8|END8_ECO8A RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783121|sp|B7LAC0|END8_ECO55 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218350869|emb|CAU96567.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|218360009|emb|CAQ97556.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|324116254|gb|EGC10175.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1167] Length = 263 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 118/293 (40%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + TS + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTS-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|313808048|gb|EFS46529.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL087PA2] Length = 299 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 36/259 (13%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 +A G + K+L+++ + + + +HLG+ G +E T P Sbjct: 63 AAMLDGTVLASAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVEPTV-------PVVGQ 115 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 V + +T+ R P+ ++ E T+GP+P + + Sbjct: 116 VRLRITDGVTAADLR----GPQTCELINDDEWGTVAA-----TIGPDPIRDDADPDVAWD 166 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYK 216 + + + + + LL+Q++ AG+GNIY E L+R ++ P + + + D++ Sbjct: 167 KVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATLGKQISHSTWLAMWDDLVML 226 Query: 217 LIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 + ++ ID + +A G R + + VY + +PCL C Sbjct: 227 MRAGVESGRIDTVQPEHTPEAMGRPPR--------VDHHGGEVYVYRREDQPCLV-CNTP 277 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + Q GR F+C CQ+ Sbjct: 278 VRMVAQGGRHLFWCPRCQR 296 >gi|145223169|ref|YP_001133847.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145215655|gb|ABP45059.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 264 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 23/249 (9%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + A G+ + + K+L +G + VHLG+ GSF P+ + V Sbjct: 36 ATAVNGRVLKKATAWGKHLFHHYDGGRVVHVHLGLYGSFTEWSLPPLLPVGQVRMRMVGT 95 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + ++P D+V LGP+P + + Sbjct: 96 EYGADLRGPTVCEVIDEPE---IADIVAR-----------LGPDPLRPDADPSLAWRRIS 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K + L++Q ++AGIGN+Y E L+R + P R S+ + D L+ + + Sbjct: 142 KSRRPIGALLMDQSVIAGIGNVYRSELLFRHRTDPFRPGTSVTADE---FDALWTDLVAL 198 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGR 279 KV + G + H G+ Y + VY + G+PC C +R + R Sbjct: 199 MKV---GVRRGKIVVVLPEHDHGAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEAR 254 Query: 280 STFYCTYCQ 288 + F+C CQ Sbjct: 255 NLFWCPNCQ 263 >gi|222053400|ref|YP_002535762.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] gi|221562689|gb|ACM18661.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] Length = 259 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 37/206 (17%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAK 58 MPELP++ + NL V K M + C +NLR + P + + + + I V R K Sbjct: 1 MPELPDLTVFAENLGKRVTKKMIRSVTC--GRNLRLNVSPRELAESLQDQVIEGVERWGK 58 Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 + L GN I+ VHL ++G F+I KP K P + I ++T+ ++ Sbjct: 59 EIRFLL-GNGKILHVHLMLTGGFVI----TGKPDKVP-FPQLVIGFEDDTS-----LVVT 107 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK------NSNLKNAL 171 D + + L PE A+ S +A+ +T K+ + K L Sbjct: 108 DEKAMA---------------MAALDPEKAEASPDALAVTVDELKRLISRFPKAKAKAFL 152 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPI 197 ++QK++ GIGN Y E LW A++SP+ Sbjct: 153 IDQKVMRGIGNAYADEILWEARISPL 178 >gi|310767016|gb|ADP11966.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 264 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 35/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K+ +TD+ F FP + G++II + R K Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVW-------FSFPTLQSYQQMLVGERIISIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL ++ H + G + I + S +P ++ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGQTLYSHNQLYGVWRIIN-SGVEPAQSKRVLRVRLAAADKT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN---ALLNQK 175 + L++ +P L+ GP+ D + A + + K L+ LL+Q Sbjct: 108 SD----IQLLDAQGLATHPFLQRAGPDVLDRALTAEQVRERLLSKRFRLRQFSGLLLDQA 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E L +A+L+ K +L + D L + + + ++ + G + Sbjct: 164 FLAGLGNYLRIEILRQAQLAAQHKAETL---SDKQLDALAEALLSVPRL---SYHTRGQA 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 218 --DENHHHGAL----FSFKVFHRAGKAC-QRCGETIVKTMLSSRPFYWCPGCQK 264 >gi|229493198|ref|ZP_04386990.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229319929|gb|EEN85758.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 265 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 33/239 (13%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + L++ VHLG+ G F T A P++ P + R++ Sbjct: 51 GKHLWHTYDNGLTVHVHLGLYGKF----TDAALPMEEP------------VGQVRMRMVG 94 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRT-----LGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 D FG T+ + PP LGP+P + + K + + L Sbjct: 95 AD---FGTDLRGPTACEVLLPPQVAAIEARLGPDPLRRDADPEKAWLRISKSKTAIGALL 151 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q ++AG+GN+Y E L+R ++P R + T ++ + E+ KV + Sbjct: 152 MDQAVLAGVGNVYRAELLFRHGINPERPGNLVSHGEWT---AMWADLVELMKV---GVRR 205 Query: 232 GGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + H +G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 206 GKMHVVRAEHDNGDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMKARNLFWCPVCQ 263 >gi|312200446|ref|YP_004020507.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311231782|gb|ADP84637.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 270 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 31/250 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + K+LL+ +G + VHLG+ G + + P V + L ++ Sbjct: 41 GRVLESAEAYGKHLLLRFDGEQVLHVHLGIYGKYTLAPGPAPTPT-----GAVRLRLASD 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 Y D R +L+E L LGP+P ++ + + + Sbjct: 96 GG-------YADLRGPNACELLEPGDVKTL--LDRLGPDPLRPDADSELAWRRISRSRTV 146 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP--KDILYKLIQEIQKV 224 + L++Q +VAG GNIY E L+RA + P + L + D+ + + ++ Sbjct: 147 IAQLLMDQAVVAGPGNIYRAEVLFRAGIDPRLSGKDLAASQWAALWADLGVLMAEGVRTG 206 Query: 225 LIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ID + +A G R H VY +TG+PCL C + AG Sbjct: 207 RIDTVRPQHTPEAMGRPPRVDDH--------GGEVYVYRRTGQPCLI-CENPVLTTELAG 257 Query: 279 RSTFYCTYCQ 288 R+ F+C CQ Sbjct: 258 RNLFWCPVCQ 267 >gi|84496902|ref|ZP_00995756.1| DNA glycosylase [Janibacter sp. HTCC2649] gi|84383670|gb|EAP99551.1| DNA glycosylase [Janibacter sp. HTCC2649] Length = 282 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 31/259 (11%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS-CAKPIKN 93 F FP +A RG +V K+LL ++ L++ HL M G + +E + A+ ++ Sbjct: 22 FRFPEIATADLRGAVTTEVVSHGKHLLHRVDSGLTVHSHLKMEGQWRVERPADTARWLRR 81 Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 L T + I R G +++V TS + + LGP+ ++ Sbjct: 82 -------ADLRAAVGTDTWSAIGL---RLGMLEIVPTSREGDI--VGHLGPDVLGPDWDP 129 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 Q + + ALL+Q+++AG+G ++ E+L+ ++ P + Sbjct: 130 EQAVAQVLASTTVIGAALLDQRVLAGVGTLWASESLFIERIGPWSAAAQVAPER------ 183 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR- 272 + L+ I + L+D +S V + V+ ++G PC CG IR Sbjct: 184 VEALVARIHR-LMD------TSRHHAVQSSTGVRRRGEEHYVHARSGRPC-RRCGNTIRV 235 Query: 273 -RIVQAG--RSTFYCTYCQ 288 I G R+ FYC CQ Sbjct: 236 SMIGPPGRERTMFYCPTCQ 254 >gi|118472403|ref|YP_886128.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium smegmatis str. MC2 155] gi|118173690|gb|ABK74586.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium smegmatis str. MC2 155] Length = 252 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 69/303 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ T+T R ++R P + + G + +V R K+L Sbjct: 1 MPEGDTVFHTAAALRAALEGKTLT-----RCDVRV--PRYATVDLSGAVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G+ SI HL M G++ I HT A P + + T R I D Sbjct: 54 FIR-AGSASIHSHLKMEGAWRIGHTKVA-----PHRIRIVL------ETADTRAIGID-- 99 Query: 121 RFGFMDLVE-----TSLKYQYPPLRTLGP--EP---ADNSFNAIYLTHQFHKKNSNLKNA 170 G +++++ ++ Y P L LGP EP ADN + L A Sbjct: 100 -LGILEVLDRGTDMDAVAYLGPDL--LGPDWEPRVAADN---------LAADPDRPLAQA 147 Query: 171 LLNQKIVAGIGNIY---VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 LL+Q+++AG+GN+Y +C R +P+ GT KD L +++Q + +L Sbjct: 148 LLDQRVMAGVGNVYCNELCFVFGRLPTAPV----------GTLKDPL-RVVQRARDMLW- 195 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 L + G +N VYG+ GEPC CG +I+ R T++C Sbjct: 196 --------LNRSRWNRTTTGDTRNGRQLWVYGRAGEPC-RRCGTLIQTDRGGERVTYWCP 246 Query: 286 YCQ 288 CQ Sbjct: 247 VCQ 249 >gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] Length = 362 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 19/219 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ ++ + F A +G K+I ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH--------TSCAKPIKNPQHNHVTISLTNNTN 108 KY I + +++H GM+G I + T+ P++ + N Sbjct: 61 GKYFWITMSKPPHVVMHFGMTGWMKIRNADTYYYRTTNADDKEWPPKYWKFLLETDENPK 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 T+ + DPRR + LV+ QY PL+ GP+P + +L + K Sbjct: 121 TE---AAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKR 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 +K LL+Q ++GIGN E L+ +K+ P + + +L Sbjct: 178 VPIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTL 216 >gi|182413447|ref|YP_001818513.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177840661|gb|ACB74913.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 301 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 47/301 (15%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELP+V + RR + V++ + + D+ + LR P S +R ++ + R Sbjct: 1 MPELPDVTVYLEALERRLIGRVLEKIRLLDLFV----LRTALPPIDSLESR--RVERLRR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFII----EHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K + + + +++HL ++G E + I + + T++LT TK+ Sbjct: 55 LGKRIALGFDDGRWLVIHLMIAGRLQWTPPGEKSRAKNVIAEFRFENGTLALTE-AGTKR 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ G + + T PE F + ++N LK AL Sbjct: 114 RASLHVVADEAGLEAHDRGGID-----VLTCSPE----EFRG-----RLMRENHTLKRAL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAI 229 + ++ +GIGN Y E L AKLSP+ T+ L +P++I L++ +E+ D + Sbjct: 160 TDPQLFSGIGNSYSDEILHAAKLSPVTLTQKL-----SPEEIARLHRSTREVLMAWTDRL 214 Query: 230 --DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +AG + F+ +V+GK G+PC CG ++RIV A YC C Sbjct: 215 RREAGEG-------FPEKVTAFRPEMAVHGKFGKPC-PVCGTTVQRIVYAENEVNYCPRC 266 Query: 288 Q 288 Q Sbjct: 267 Q 267 >gi|168988643|pdb|2OQ4|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate gi|168988644|pdb|2OQ4|B Chain B, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 36/292 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKY 59 P+ PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 PQGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGKA 53 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 LLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSAS 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKI 176 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 D----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAF 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 LAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYAT 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 RGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens] Length = 268 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 27/246 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 M ELPEVE +R + T+ + D P GKKI+ R K Sbjct: 1 MAELPEVEAAKRLVNCHCLGATIVKAIVDNDTKVIDGVTPAVLQETLTGKKIVSALREGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-----------HNHVTISLTNNT 107 ++ ++L+ S +FI++ ++ ++P+ H+ V + L N Sbjct: 61 HIWLQLDSRPWPSYQFDTSSAFIVKGAKGSQ-YRSPKVSDEEEAFPTTHSKVLLQLDNGV 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V + D RFG + L++ PP+ LG + NA T K ++ Sbjct: 120 -----EVAFTDKLRFGRVRLLDNP--SIAPPISELGFDAYLELPNAEQFTEALKTKKGSV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++AK+ P + SL + + KL I++VL Sbjct: 173 KALLLDQSFLSGIGNWVGDEVLFQAKIHPEQSVNSLTEEQ------VAKLHTAIREVLDK 226 Query: 228 AIDAGG 233 A+ G Sbjct: 227 AVSVDG 232 >gi|296130989|ref|YP_003638239.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] gi|296022804|gb|ADG76040.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] Length = 305 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 13/153 (8%) Query: 142 LGPEP---ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+P D + + ++N + L++Q +VAGIGNIY E L+RA+L P Sbjct: 159 LGPDPLVVEDVDTAGEVVVDRVTRRNVAVGQLLMDQAVVAGIGNIYRAELLFRARLDPWT 218 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA---FSV 255 R + P D++ + ++ +L D + G R+ + G + V Sbjct: 219 PGRRV------PADVVRAVWRDWTGLLADGVRDGMILTREDLDAAGRAAAVADPTLRHWV 272 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ G+PC CG +R A R + C CQ Sbjct: 273 YGRAGQPC-RVCGTPVRVEEMATRKLYRCPVCQ 304 >gi|215485737|ref|YP_002328168.1| endonuclease VIII [Escherichia coli O127:H6 str. E2348/69] gi|312965146|ref|ZP_07779383.1| endonuclease VIII [Escherichia coli 2362-75] gi|254783120|sp|B7ULJ5|END8_ECO27 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|215263809|emb|CAS08145.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|312290237|gb|EFR18120.1| endonuclease VIII [Escherichia coli 2362-75] Length = 263 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP S +R G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSRLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +G + D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGHDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K + L N D L + +I ++ +D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRLSYATRGQVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GEPC CG +I + + R ++C CQ Sbjct: 220 KYHGALFR---------------FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|307130091|ref|YP_003882107.1| Endonuclease VIII [Dickeya dadantii 3937] gi|306527620|gb|ADM97550.1| Endonuclease VIII [Dickeya dadantii 3937] Length = 262 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 41/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L+ + T+T + F FP + A G+++ + R K Sbjct: 1 MPEGPEIRRAADRLVAAVVGKTLTGVW-------FAFPELKPYEATLMGEQVERIVTRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L + H + G + + K P + + +T+ + Sbjct: 54 ALLTRFSNGLVMYSHNQLYGVWRVG--------KQPPDTRRELRVRLDTDDNAVSLYSAS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + ++ +P L+ +GP+ D S L+ +F ++ L LL+ Sbjct: 106 D-----IAMLTPEQLATHPFLQRIGPDVLDESLTVDEVRERLLSARFCRRQ--LGTLLLD 158 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW + L+P R+ L + +L +++ EI ++ + G Sbjct: 159 QGFLAGLGNYLRVEILWASALAPTRRAADLSEAELA---MLSRMLLEIPRL---SYQTRG 212 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + H G++ F+ F V+ GEPC CGQ I + + A R + C +CQ+ Sbjct: 213 SESDERRH-HGAL--FR--FHVFHLDGEPC-ERCGQPIVKSLVASRPFYACPHCQQ 262 >gi|314923839|gb|EFS87670.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL001PA1] gi|314966148|gb|EFT10247.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL082PA2] gi|314982012|gb|EFT26105.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA3] gi|315090827|gb|EFT62803.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA4] gi|315095039|gb|EFT67015.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL060PA1] gi|315104377|gb|EFT76353.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL050PA2] gi|327328183|gb|EGE69952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 235 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 17/157 (10%) Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 T+GP+P + ++ + + + + + LL+Q++ AG+GNIY E L+R ++ P Sbjct: 85 TIGPDPIRDDADSDVAWDKVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPG 144 Query: 201 RSLIQNN--GTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNA 252 + + + D++ + ++ ID + +A G R + Sbjct: 145 KQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMGRPPR--------VDRHGGE 196 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 197 VYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 232 >gi|240276344|gb|EER39856.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H143] gi|325089797|gb|EGC43107.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H88] Length = 383 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 22/215 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICSNLVGKTITKVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----------AKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA-DNSFNAI-YLTHQFH 161 ++N++ + DPRRFG + LV+ ++ PL+ GP+P D + +L + Sbjct: 121 SSNSE---AAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLT 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 K +K LL+Q ++GIGN E L+ AK+ P Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHP 212 >gi|119475797|ref|ZP_01616149.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] gi|119450424|gb|EAW31658.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] Length = 279 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 37/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + V+KN TV I F P + F +G K++ + R K Sbjct: 1 MPEGPEIRRAADKIEAVLKNKTVEKI-------EFGLPALNPFVRPLQGSKVLSLETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + L+I H + G + + K K P+ N L +T ++ + Sbjct: 54 ALLTHFDSGLTIYSHNQLYGVWHV-----VKRDKLPKTNR---QLRLAIHTDQHSALL-- 103 Query: 119 PRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLN 173 F D+ ET ++ L+ +GP+ + S + + K L + L+ Sbjct: 104 ---FSASDITVWETQHIEEHHFLKRIGPDILNPSLAWRTVADRLQSKAFAGRALSSVYLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E L+ A + P K+R L K + KL + +V + G Sbjct: 161 QAFLAGLGNYLRSEILFIAGIHPSCKSRDL------SKGQIGKLARTTLEVSQRSYSLAG 214 Query: 234 SSL--RDY-VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ R Y V + Y + F V+G+ G+PC C I+R R + C+ CQ+ Sbjct: 215 VTIPERQYKVLKKQGVTYGKARFFVFGRAGKPC-RVCQTKIQRSTANSRRIYTCSTCQR 272 >gi|284030196|ref|YP_003380127.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] gi|283809489|gb|ADB31328.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] Length = 299 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 33/257 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + K+ L + EG + +HLG+ G +P+ V + Sbjct: 36 AALLDGRVLRHTEAHGKHFLADFEGGGWLHIHLGLIGKVDFGSAPIPEPV-----GQVRL 90 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 L N+ Y D R +++ + + LGP+P + + + Sbjct: 91 RLQND-------AAYADLRGATVCEVLTDGEREAL--IGRLGPDPLRDDADPDLAWKRIQ 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN---NGTPKDILYKLI 218 + + L++Q++++G+GN+Y E L+RAKL P+ +L++ G D+L + Sbjct: 142 RSKLPIGRLLMDQEVLSGVGNVYRAEVLFRAKLHPMTPG-NLVRKREWQGMWTDLLELMK 200 Query: 219 QEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 ++ ID + +A G R H VY + G+ C C +IR Sbjct: 201 YGVETGRIDTVTDDHTPEAMGRDPRRDDH--------GGEVYVYRRHGQHC-HVCDSVIR 251 Query: 273 RIVQAGRSTFYCTYCQK 289 + AGR+ F+C CQ+ Sbjct: 252 TELLAGRNLFWCPKCQR 268 >gi|152965456|ref|YP_001361240.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151359973|gb|ABS02976.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 62/296 (20%), Positives = 124/296 (41%), Gaps = 43/296 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + R + + + ++ + +LR+ P + G+++++V K++L Sbjct: 1 MPEGDTVWRTARRLHRALAGRELLV--SDLRW--PSLATVDLSGREVLEVVSAGKHVLTR 56 Query: 64 LEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + L++ HL M GS+ +E T +P + T ++ + + Sbjct: 57 VAAGGDDPPLTLHSHLRMEGSWFVERTG------DPHGRRSASGIRAVLTTAEWTAVGH- 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 + G +DLV T + + + LGP+ ++ + + L ALL+Q+++ Sbjct: 110 --KLGMLDLVSTDREAEL--VGHLGPDLLSPGWDPEEARRRLLADPARELGAALLDQRVL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+G +Y+ EA + +L+P L G L+ + V D R Sbjct: 166 AGVGTLYMAEACFLVRLTPWSPVSDLEDPEG-----FLALLHRLLHVNKD---------R 211 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 G + + + F+ + ++G PCL G + R+ G R+ FYC CQ Sbjct: 212 PAQVTTGDLRHGRQHFA-HARSGLPCLRCAGTV--RVAPIGVPPQDRTAFYCPGCQ 264 >gi|282854733|ref|ZP_06264068.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] gi|282582315|gb|EFB87697.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] Length = 272 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 17/157 (10%) Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 T+GP+P + ++ + + + + + LL+Q++ AG+GNIY E L+R ++ P Sbjct: 122 TIGPDPIRDDADSDVAWDKVRRSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPG 181 Query: 201 RSLIQNN--GTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNA 252 + + + D++ + ++ ID + +A G R + Sbjct: 182 KQISHSTWLAMWDDLVMLMRAGVESGRIDTVQPEHTPEAMGRPPR--------VDRHGGE 233 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 234 VYVYRREDQPCLV-CNTPVRMVAQGGRHLFWCPRCQR 269 >gi|154287302|ref|XP_001544446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408087|gb|EDN03628.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 383 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICTNLVGKTITQVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF----IIEHTSCAKP-------IKNPQHNHVTISLTN 105 KY I + ++H GM+G + H S P + P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEESVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA-DNSFNAI-YLTHQFH 161 ++N++ + DPRRFG + LV+ ++ PL+ GP+P D + +L + Sbjct: 121 SSNSE---AAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 K +K LL+Q ++GIGN E L+ AK+ P Sbjct: 178 SKKVPMKALLLDQANISGIGNWMGDEILYHAKIHP 212 >gi|323191061|gb|EFZ76326.1| endonuclease VIII [Escherichia coli RN587/1] Length = 263 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D ++ Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLDTPRLSYAT 212 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 213 -RGQVDENKYHGALFR-FKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|161504121|ref|YP_001571233.1| endonuclease VIII [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189037133|sp|A9MJM8|END8_SALAR RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|160865468|gb|ABX22091.1| hypothetical protein SARI_02219 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 263 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 116/294 (39%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADHLEAAIKGKLLTDVWFAFAQLK-----PYESQLTGQMVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + I + H T L T ++ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRV--------IDTGEIPHTTRILRVRLQTADKTILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 108 D---IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+++L+ K KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQSELTGQHKA----------KDLSEAQLNTLSHALLD-IPRLSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R + G Q F V+ + GE C CG +I + + R ++C +CQK Sbjct: 212 TRGQTDENKHHGA-QFRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|51247249|pdb|1Q3C|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The E2a Mutant At 2.3 Resolution Length = 262 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 36/292 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKY 59 P PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 PAGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGKA 53 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 LLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSAS 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKI 176 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 D----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAF 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 LAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYAT 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 212 RGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|322418248|ref|YP_004197471.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] gi|320124635|gb|ADW12195.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] Length = 261 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 44/291 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + V + H++ S A G ++ V R K + Sbjct: 1 MPELPDLTVYAENLGKALTGKKVDRVEYHQRGKLNVSAAELSRALAGAEVTGVQRGGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + VHL ++G F++ S + QH +T++ ++ + + D + Sbjct: 61 AFHFGNGALLRVHLMLTGGFVLTSPSA---LDRLQHPVLTVAFSDGSA-----LALTDEK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF------HKKNSNLKNALLNQ 174 + + L P ++ +A+ L+ + K + +K LL+Q Sbjct: 113 GWASV---------------ALNPGEEKDAPDALALSAEQLQQLCQRKPRTLIKPLLLDQ 157 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++ GIGN Y E LW A++SP L P + + L I VL DAI + Sbjct: 158 ALIGGIGNAYADEILWAARISPKSPAGKL------PPEAVKALADAIPAVLKDAI----T 207 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-QMIRRIVQAGRSTFYC 284 LR H D G ++ V+ E +S G ++I+ VQ+ R T+Y Sbjct: 208 ELRKR-HPDMVSGEYREFLKVH--RPELKVSPTGAKIIKENVQSKR-TYYT 254 >gi|82543143|ref|YP_407090.1| endonuclease VIII [Shigella boydii Sb227] gi|187732849|ref|YP_001879368.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|123560282|sp|Q324J6|END8_SHIBS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741126|sp|B2TU97|END8_SHIB3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81244554|gb|ABB65262.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella boydii Sb227] gi|187429841|gb|ACD09115.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|320175361|gb|EFW50465.1| Endonuclease VIII [Shigella dysenteriae CDC 74-1112] gi|320183672|gb|EFW58512.1| Endonuclease VIII [Shigella flexneri CDC 796-83] gi|332097678|gb|EGJ02653.1| endonuclease VIII [Shigella boydii 3594-74] Length = 263 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVGTRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|126436180|ref|YP_001071871.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] gi|126235980|gb|ABN99380.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] Length = 268 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 99/257 (38%), Gaps = 33/257 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ S K+L G I VHLG+ G F S P +P V + Sbjct: 36 AAMVDGRTFTGASAWGKHLFHHYRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRM 94 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + R P +D + S L LGP+P + + + Sbjct: 95 RMVGDGHGTDLR----GPTACEIVDEAQVSDI-----LARLGPDPLRRDADPAPAWTRLN 145 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + L++Q ++AG+GN+Y E L+R ++ P R +L D ++ + E+ Sbjct: 146 RSRRPVGALLMDQTVIAGVGNVYRSELLYRHRIDPYRLGTNLEPGE---FDAMWTDLVEL 202 Query: 222 QKVLI---------DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 KV + D G S R + VY + EPC CG + Sbjct: 203 MKVGVRRGKIVTVRPEDDHGAPSYRT----------GRPRTYVYRRALEPC-RICGTPVN 251 Query: 273 RIVQAGRSTFYCTYCQK 289 V GR+ F+C CQ+ Sbjct: 252 TAVLEGRNLFWCPTCQR 268 >gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue; AFUA_4G11930) [Aspergillus nidulans FGSC A4] Length = 363 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 21/224 (9%) Query: 1 MPELPE----VEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIID 52 MPEL E V IR++L+ T+ + ++ + F A GKK+I Sbjct: 1 MPELAEIYRIVHFIRQHLV----GKTLAKVSTQHDDIVYGKVGTSAAEFQKAMEGKKVIG 56 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKNPQHNHVTISLTNNT 107 ++ KY I + +++H GM+G I KP L Sbjct: 57 TGQQGKYFWITMTSPPHVVMHFGMAGWLKIRDADTYYYRTDKPEDKQWPPKYWKFLLETD 116 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP--ADNSFNAIYLTHQFHKK 163 K + D RR + LV+ + Y PL+ GP+P + +L + K Sbjct: 117 GDPKVEAAFVDFRRLARIRLVDCPAEEIRNYTPLKENGPDPLVDKDVVTKEWLGSKLSSK 176 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +K LL+Q +++GIGN E L+ AK+ P + + +L + Sbjct: 177 KVPVKALLLDQAVISGIGNWMGDEILYHAKIHPEQYSNTLTDDQ 220 >gi|255020515|ref|ZP_05292579.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254970035|gb|EET27533.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 268 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 31/293 (10%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E+ R+ L ++ K + + + + ++ D S A +G++I D+ R + Sbjct: 1 MAELPEIELFRQKLRRNVLHKRLGLVQMRNGKGEIQDDGAGLASDALKGREITDLYRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL EL+G +++ LG S +E P + + + N + R+ Sbjct: 61 YLFWELDGREILVLQLGGELSVEVER-GAPTPAEGGDEPRAQLEIQINAH---MRLRLQG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEP---ADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + + L++ S + L LGP+P D + + +L ++ S L+N LL+ Sbjct: 117 TQLGNRLRLLDESSDVDF--LTKLGPDPLLLPDGARS--HLREALARRRSALRNVLLDDA 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 + G+G ++ E L++A L P R +L + +L+++I +V+ A+ + Sbjct: 173 FLPGLGPVWADEILFQAGLRPDRTVPTLTEEE------RERLLEQIARVIERALRS---- 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F + C CG + + GR+ +C CQ Sbjct: 223 -------QAKVPLLPKTFLTRHREDGHC-PGCGGALETLSVGGRNALFCPACQ 267 >gi|157155050|ref|YP_001461874.1| endonuclease VIII [Escherichia coli E24377A] gi|193065520|ref|ZP_03046588.1| endonuclease VIII [Escherichia coli E22] gi|194429067|ref|ZP_03061598.1| endonuclease VIII [Escherichia coli B171] gi|209917964|ref|YP_002292048.1| endonuclease VIII [Escherichia coli SE11] gi|260842922|ref|YP_003220700.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|293432982|ref|ZP_06661410.1| endonuclease VIII [Escherichia coli B088] gi|300816361|ref|ZP_07096583.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300822999|ref|ZP_07103134.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300918372|ref|ZP_07134972.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300926116|ref|ZP_07141929.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|301327902|ref|ZP_07221075.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|331667079|ref|ZP_08367944.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331676394|ref|ZP_08377091.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] gi|166920089|sp|A7ZJ95|END8_ECO24 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741115|sp|B6I7Y5|END8_ECOSE RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157077080|gb|ABV16788.1| endonuclease VIII [Escherichia coli E24377A] gi|192926809|gb|EDV81435.1| endonuclease VIII [Escherichia coli E22] gi|194412898|gb|EDX29189.1| endonuclease VIII [Escherichia coli B171] gi|209911223|dbj|BAG76297.1| endonuclease VIII [Escherichia coli SE11] gi|257758069|dbj|BAI29566.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|291323801|gb|EFE63223.1| endonuclease VIII [Escherichia coli B088] gi|300414435|gb|EFJ97745.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300417815|gb|EFK01126.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|300524540|gb|EFK45609.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300531051|gb|EFK52113.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300845586|gb|EFK73346.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|320198170|gb|EFW72774.1| Endonuclease VIII [Escherichia coli EC4100B] gi|323158762|gb|EFZ44775.1| endonuclease VIII [Escherichia coli E128010] gi|323170829|gb|EFZ56479.1| endonuclease VIII [Escherichia coli LT-68] gi|323185128|gb|EFZ70494.1| endonuclease VIII [Escherichia coli 1357] gi|323947022|gb|EGB43036.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H120] gi|324020343|gb|EGB89562.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 117-3] gi|331065435|gb|EGI37328.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331075887|gb|EGI47184.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] Length = 263 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|51247248|pdb|1Q3B|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The R252a Mutant At 2.05 Resolution. gi|168988638|pdb|2OPF|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (R252a) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 36/292 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKY 59 PE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGKA 53 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 LLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSAS 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKI 176 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 D----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAF 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 LAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYAT 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GEPC CG +I + + ++C CQ Sbjct: 212 RGQVDENKHHGALFR-FKVFHRDGEPC-ERCGSIIEKTTLSSAPFYWCPGCQ 261 >gi|306834739|ref|ZP_07467805.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304569376|gb|EFM44875.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + + RF +A G +I K+L + Sbjct: 1 MPEGHVIHRLALTLNADYRGMPLSVTSPQGRFATE---AAILDGAEIDHAEAFGKHLFVH 57 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +HLG+ G E + + I + N + R P+ Sbjct: 58 FTAANPAHTLYIHLGLIGKLSFE-------PREDTRGQIRIRIDNGAQAAQLR----GPQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L+ T YQ L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 107 ----FCLLLTEEDYQ-ARLTKVGQDPLRADADPEALWTKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+RA LSP + + + KD++ + ++ ID + A S + Sbjct: 162 GNIYRAEALFRAGLSPFTPGKDVSRETFFAIWKDLVELMNYGVEHGRIDTVRAEHSP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D VY + G PC CG I V GR+ F+C CQ Sbjct: 220 AMGRDPRKDDHGGEVYVYRRAGLPCYV-CGTPIAEQVMEGRNLFWCPTCQ 268 >gi|312970791|ref|ZP_07784970.1| endonuclease VIII [Escherichia coli 1827-70] gi|310336552|gb|EFQ01719.1| endonuclease VIII [Escherichia coli 1827-70] gi|332342049|gb|AEE55383.1| endonuclease VIII [Escherichia coli UMNK88] Length = 263 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSPLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTVD--KTILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|255531639|ref|YP_003092011.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] gi|255344623|gb|ACU03949.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] Length = 258 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 41/257 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELP++E+ NL K+ T+ + + + + P G ++ V R K Sbjct: 1 MPELPDLEVFAANLEKRFKHKTLERLEVQVAK-KLNVPEKELKETLEGHQLTAVKREGKT 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI---Y 116 + + + +HL + G+ ++L KY ++ + Sbjct: 60 IQLHFGPERILGLHLMLHGA---------------------LNLIEADEKIKYPIVSFHF 98 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 F D + + P+ + P+ + YL KK + +K L++Q + Sbjct: 99 KTGHGFALTDF-QKAATLTLNPVVSDVPDALSKEMSVNYLEAVLAKKKAPIKTVLMDQHL 157 Query: 177 VAGIGNIYVCEALWRAKLSPIR--------KTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + GIGN Y E LW A +SP K R L Q G +L K IQ+I K+L D Sbjct: 158 IRGIGNTYADEILWEAGISPFSVSKAIPKAKVRELHQVIGK---LLRKEIQQISKMLPDE 214 Query: 229 IDAGGSSLRDYVHIDGS 245 + G ++D++ I G+ Sbjct: 215 L---GGEIKDFLKIHGA 228 >gi|305681732|ref|ZP_07404538.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658892|gb|EFM48393.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] Length = 268 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + T T + RFD + G+ ++ K+L IE Sbjct: 1 MPEGHVIHRLAQHLNREFTDTSPIVTSPQGRFDAQ---ARTLDGQPYLESDAYGKHLFIE 57 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + I +HLG+ GS E + K + + + NT R P+ Sbjct: 58 FDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATNTIAANLR----GPQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + E ++ + LG +P + + + +K N ++ + L++Q + G+ Sbjct: 107 WCRLITAEEKAVA-----VDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI--DAGGSSLRD 238 GNIY E L+R + P + + D++ + + ++ ID + + ++ Sbjct: 162 GNIYRAETLFRLGIDPFSSGKD-ADFDAIWADLVQLMAEGVKAGRIDTVRPEHTPEAMNR 220 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G VY + G+ C CG I V GR+ F+C CQK Sbjct: 221 PPRVDDHGG----EVYVYRRAGQKCYI-CGTPINEQVMEGRNLFWCPTCQK 266 >gi|300906969|ref|ZP_07124639.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|301305199|ref|ZP_07211297.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|300401272|gb|EFJ84810.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|300839511|gb|EFK67271.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|315257630|gb|EFU37598.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 85-1] Length = 263 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|239979455|ref|ZP_04701979.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291451324|ref|ZP_06590714.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291354273|gb|EFE81175.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] Length = 318 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 43/256 (16%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + K+L ++ G+ + +HLG+ G + + A P P + + + +T Sbjct: 41 GAEFAGAEAHGKHLFLDFGGHGWVHIHLGLFGK--VARGTGAPP---PPTDTIRLRITAE 95 Query: 107 TNTKKYR-----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP--ADNSFNAIYLTHQ 159 R + D + D LGP+P AD++ +A + + Sbjct: 96 DAWSDLRGPTACTLLTDEDKQAVHD--------------RLGPDPLRADDTPDAAW--RR 139 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + + + L++QK+VAG+GN+Y E L+R + P L + T + Y L Sbjct: 140 ISRSRTAVAALLMDQKVVAGVGNVYRAEVLFRHGIDPYTPGNRLTR--ATWDTLWYDLAA 197 Query: 220 EIQK-VLIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIR 272 +++ V D ID ++R H ++G VY + G PCL CG+ IR Sbjct: 198 LMREGVRHDRID----TVRPE-HTPEAMGRPPRVDDHGGEVYVYRRDGRPCLV-CGEQIR 251 Query: 273 RIVQAGRSTFYCTYCQ 288 A R+ F+C CQ Sbjct: 252 TASLAARNLFWCPRCQ 267 >gi|326330788|ref|ZP_08197089.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951318|gb|EGD43357.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 161 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 17/156 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++Q ++AG+GN+Y E L+R ++ P+R Sbjct: 5 LGPDPLRDDADPGRAWLRISRSRTTIGALLMDQSVLAGVGNVYRAEVLFRHRIDPMRPGN 64 Query: 202 SL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 +L Q + D++ + ++K ID + +A G R H G Y Sbjct: 65 TLRRQQWDAIWDDLVELMKDGVEKNRIDTVRDEHTPEAMGRPPRKDDH--GGEVY----- 117 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G+PCL CG +R R+ F+C CQ+ Sbjct: 118 -VYRRNGQPCLV-CGTSVRTTELQQRNLFWCPKCQR 151 >gi|242768773|ref|XP_002341637.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] gi|218724833|gb|EED24250.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] Length = 359 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 17/218 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ + ++ + F A +G KI ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGRTLANVQVQNDDIVYGKAGTTAAEFQKAMQGNKITGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-------TSCAKPIKNPQHNHVTISLTNNTNT 109 KY I + +++H GM+G I + T+ A + P + T+ T Sbjct: 61 GKYFWITMAKPPHVVMHFGMTGWLKIRNADTYYYRTTNADDKEWPPKYWKFLLETD--ET 118 Query: 110 KKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKKNS 165 K + DPRR + LV+ +Y PLR GP+P + +L + K Sbjct: 119 PKTEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKKV 178 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 +K LL+Q ++GIGN E L+ +K+ P + + +L Sbjct: 179 PIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTL 216 >gi|298708421|emb|CBJ48484.1| conserved unknown protein [Ectocarpus siliculosus] Length = 532 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 28/217 (12%) Query: 1 MPELPEVEIIRR-----NLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAAT-----RG 47 MPELPEVE R L + N+ T+ ++ +FD +A + G Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEG 60 Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK-------NPQHNHVT 100 +KI+++ RR K + L+ + H GM+G+F ++ K +K P+ + Sbjct: 61 RKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLE 120 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 I ++N + DPRR + L + PP+ LGP+P + + Sbjct: 121 IQMSNGAC-----LALTDPRRLSRVKL--RAEPEASPPISLLGPDPLTHPLSLETFAAAL 173 Query: 161 HKKNSNLKNALLNQ-KIVAGIGNIYVCEALWRAKLSP 196 K + +K LL Q ++V+G+GN E ++A + P Sbjct: 174 AKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHP 210 >gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum JL354] Length = 260 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 73/307 (23%), Positives = 113/307 (36%), Gaps = 65/307 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR---------KNLRFDFP-HHFSAATRGKKI 50 MPELPE E N + V ++ CLHR + P + G + Sbjct: 1 MPELPEAEA---NRLRVERD------CLHRTIEAAEPGDDTSYIELPGDNERGRLVGHQF 51 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNN 106 R K + E I VHLGMSGS +P P + I Sbjct: 52 TRTHRHGKLIFAGSESGPWICVHLGMSGSL--------RPFDEADGPPDYAKFLIRFEG- 102 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + R+ + PR+ G++ +V++ + +G P Sbjct: 103 ----ERRLAFRCPRKLGWVRVVDSP----EAEIERIGFGPDALEIGRDAFAEVIGDSRGA 154 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+AL+ QK +AG+GN++ E L+R + P RK L + L Sbjct: 155 IKSALIEQKKLAGVGNLWSDEILYRTAIDPQRKGTDLSDSQ-----------------LG 197 Query: 227 DAIDAGGSSLRDYVH--IDGSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 D DA +RD +H +D Y + + ++ + CG I R GRS F Sbjct: 198 DIYDA----MRDILHAVVDTEADYSKLPDDWLIHTRDEGAECPRCGGEIVRTKVGGRSAF 253 Query: 283 YCTYCQK 289 +CT Q+ Sbjct: 254 HCTRHQE 260 >gi|108798236|ref|YP_638433.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119867332|ref|YP_937284.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|108768655|gb|ABG07377.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119693421|gb|ABL90494.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] Length = 257 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 117/292 (40%), Gaps = 41/292 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + R + + + L R ++R P + + G + +V R K+L I Sbjct: 1 MPEGDTVYRTATALREGLVGK--TLTRCDVRV--PRYATVDLTGHVVDEVLSRGKHLFIR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYNDPRR 121 + G SI HL M GS+ + P P + I L + + D Sbjct: 57 V-GPASIHSHLKMEGSWKV------VPASRPSRAGYRIRIILEAGEGEQAVQAAGID--- 106 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGI 180 G ++++E + + LGP+ + + + L ALL+Q+++AG+ Sbjct: 107 LGVLEILERD--HDMETVAHLGPDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAGV 164 Query: 181 GNIYVCEALWRA---KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GN+Y E + A +P+R + ++ +D+L+ + G R Sbjct: 165 GNVYANELCFVAGHLPTAPVRDLKDPLRMVHRARDMLWLNRSRWNRTTTGDTRPG----R 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 221 D--------------VWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|24112009|ref|NP_706519.1| endonuclease VIII [Shigella flexneri 2a str. 301] gi|30062122|ref|NP_836293.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|110804657|ref|YP_688177.1| endonuclease VIII [Shigella flexneri 5 str. 8401] gi|57012687|sp|Q83LZ7|END8_SHIFL RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|123048356|sp|Q0T6V4|END8_SHIF8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|24050826|gb|AAN42226.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 301] gi|30040367|gb|AAP16099.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 2457T] gi|110614205|gb|ABF02872.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 5 str. 8401] gi|281599971|gb|ADA72955.1| Endonuclease VIII [Shigella flexneri 2002017] gi|313649649|gb|EFS14073.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|332760924|gb|EGJ91212.1| endonuclease VIII [Shigella flexneri 4343-70] gi|332761228|gb|EGJ91514.1| endonuclease VIII [Shigella flexneri 2747-71] gi|332763970|gb|EGJ94208.1| endonuclease VIII [Shigella flexneri K-671] gi|332768190|gb|EGJ98375.1| endonuclease VIII [Shigella flexneri 2930-71] gi|333007378|gb|EGK26858.1| endonuclease VIII [Shigella flexneri VA-6] gi|333007744|gb|EGK27220.1| endonuclease VIII [Shigella flexneri K-218] gi|333021566|gb|EGK40816.1| endonuclease VIII [Shigella flexneri K-304] Length = 263 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFPNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|330469897|ref|YP_004407640.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] gi|328812868|gb|AEB47040.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] Length = 270 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 37/243 (15%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+LL G + VHLG+ G H +P+ + + L + + Sbjct: 53 GKHLLHHYAGERILHVHLGLYGKVTDGHGEPPEPV-----GQIRLRLATDRH-------- 99 Query: 117 NDPRRFGFMDL-VETSLKYQYPP----LRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++DL T+ + PP LR LGP+P + + + ++ L Sbjct: 100 -------WLDLRGPTACELLTPPEAAALRARLGPDPLRADADPQRAYARISRSSTPLAAL 152 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL----- 225 LL+Q +VAG G I+V EAL+RA LSP R L + D L+ + E+ + Sbjct: 153 LLDQSVVAGTGLIFVTEALFRAGLSPTLPGRELTRAG---WDALWVDLVELMTLAVGTGR 209 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 ID + A L + + + VY + +PC C I R A R+ ++C Sbjct: 210 IDTVRA--EHLPEAMGRPARVDRHGGEVYVYRRPDQPC-HVCATPISRGTIAARNLYWCP 266 Query: 286 YCQ 288 CQ Sbjct: 267 TCQ 269 >gi|54288361|gb|AAV31649.1| hypothetical protein Red2C11_65 [uncultured alpha proteobacterium EBAC2C11] Length = 291 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 41/250 (16%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ I++ K+L+ + ++ VHLG+ G + A+P V + L N Sbjct: 68 GRICINIEAFGKHLIYHFDNGEALHVHLGLFGKIRKQRLPAAEP-----RGAVRVRLVGN 122 Query: 107 TNTKKYRVIYNDPR------RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 T+ + N P FMDL+ +GP+ + N + Sbjct: 123 THL----IDINGPNICEILAEHEFMDLINR-----------IGPDVLRSDANPTLAFEKI 167 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLI 218 K + + +++Q ++AGIGNIY E LWR L P + Q N +D L Sbjct: 168 KKSKAPIGRLIMDQAVMAGIGNIYRSEILWRQALHPETPGNRIDQQTFNRIWEDARALLT 227 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ++ I +D +S R Y + +++ K E C C +RR +G Sbjct: 228 IGVKHNAIITVDGARASSRRY----------RERVNIFAK--EVC-PRCKGKVRRFEISG 274 Query: 279 RSTFYCTYCQ 288 R F C CQ Sbjct: 275 RRAFVCEVCQ 284 >gi|311893869|dbj|BAJ26277.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 263 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 29/256 (11%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P H +A G+++++ R K+LL EG +++ HL M G + + P Sbjct: 28 FRVPAHATADLTGRRVLETVPRGKHLLTRFEGGVTLHTHLRMDGRWQTFQPG-ERWRSGP 86 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 + T N YR+ + L+ T+ +++ + LGP+ ++A Sbjct: 87 AFQIRVVLGTGNGTAVGYRLP--------VVQLLRTAEEHRV--VGHLGPDLLGPDWDAA 136 Query: 155 YLTHQ-FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + L ALL+Q ++AGIGN+Y E + A ++P L P ++ Sbjct: 137 EARRRLLADPRRPLGAALLDQHVLAGIGNVYANELPFLAGVTPWLPVGDLPD----PDEL 192 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L + + L+DA + LR H+ + VYG+ PCL CG IR Sbjct: 193 L-----DGARQLLDA-----NRLRPG-HVTTGDPRPGHRNWVYGRARRPCL-RCGTPIRT 240 Query: 274 IVQ-AGRSTFYCTYCQ 288 R+ ++C CQ Sbjct: 241 AKHDRERAAYWCPRCQ 256 >gi|256832180|ref|YP_003160907.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] gi|256685711|gb|ACV08604.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] Length = 343 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 29/169 (17%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + ++ S + L+NQK +AG+GNIY EAL+RA+LSP Sbjct: 173 LGPDPIRDDADPQRFLTAVNRSRSAIGGLLMNQKTIAGVGNIYRAEALFRARLSP----- 227 Query: 202 SLIQNNGTPKDILYKLIQEI-----QKVLIDAIDAGGSSLRDYV---------------- 240 N P L L ++ Q AI S+ R+ Sbjct: 228 -YTPGNTIPTHTLTALWNDLVTLMRQGAHTGAIVTTHSADRNTTPPAPNNPRSRTRQNTD 286 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H +I Q AF VY + G+PC CG I R ++C CQ Sbjct: 287 HTPDAIPTDQ-AFYVYQRHGQPC-RRCGTPIALADMQARKLYWCPTCQS 333 >gi|205351992|ref|YP_002225793.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856172|ref|YP_002242823.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226741120|sp|B5QWF8|END8_SALEP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741121|sp|B5R679|END8_SALG2 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|205271773|emb|CAR36607.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707975|emb|CAR32264.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627032|gb|EGE33375.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 263 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G S Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQS 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|320010811|gb|ADW05661.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 273 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 33/251 (13%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + V K+L + EG+ + +HLG+ G P V + L N+ Sbjct: 41 GRVLTGVDAHGKHLFLGFEGSAWVHIHLGLFGKLGFGTVPAPPPTDT-----VRLRLLND 95 Query: 107 TNTKKYR-----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP--ADNSFNAIYLTHQ 159 ++ R + P + D LGP+P AD +L + Sbjct: 96 SHHADLRGPTTCALITGPEKRAIHD--------------RLGPDPLRADEDGERAWL--R 139 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKL 217 + + L++QK+VAG+GN+Y E L+R + P R + L + + D+ + Sbjct: 140 IARSRVTVAALLMDQKVVAGVGNVYRAEVLFRHGIDPYRAGKDLTRAEWDAIWADLGVLM 199 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + ++ ID + L + + + VY + + C CG IR A Sbjct: 200 REGVRNNRIDTVRP--EHLPEAMGRPPRVDDHGGEVYVYRRARQAC-HICGTEIRTADLA 256 Query: 278 GRSTFYCTYCQ 288 R+ F+C CQ Sbjct: 257 ARNLFWCPACQ 267 >gi|309811758|ref|ZP_07705534.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434281|gb|EFP58137.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 289 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 29/245 (11%) Query: 57 AKYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K++L+ EG + + +HLG+ G F T +P++ P + L +++ Sbjct: 51 GKHMLVAFEGLDERVNIHLGLLGKFFW--TYGVEPVEAPITGAIRWRLGASSDD------ 102 Query: 116 YNDPRRFGFMDLVETSLKYQYPP------LRTLGPEP----ADNSFNAIYLTHQFHKKNS 165 D R MDL ++ P + LGP+P AD + + H ++ Sbjct: 103 -GDARGSVVMDLRGPNVCALKTPDEVAAIVGKLGPDPLRVDADPDVAWVRIRHT----ST 157 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL--IQNNGTPKDILYKLIQEIQK 223 + L++QK+ G+GNIY E L+R L P + L + + D++ + ++ Sbjct: 158 PIAALLMDQKVFNGVGNIYRAEVLFRHGLDPKMPGKFLRRTEFDAIWADLVALMPLGVRD 217 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 ID + S + + D + VY + G+PCL CG + AGR+ F+ Sbjct: 218 GRIDTVRDEHSP--EIMGRDPRVDKHGGEVYVYRRAGQPCLV-CGTPVAIEEFAGRNLFW 274 Query: 284 CTYCQ 288 C CQ Sbjct: 275 CPRCQ 279 >gi|302539979|ref|ZP_07292321.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457597|gb|EFL20690.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 289 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 61/261 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS---------AATRGKKII 51 MPELPEVE + + D + R+ R P S A G+ + Sbjct: 1 MPELPEVEAL---------AGILADRAVGREIARV-LPVAVSVLKTYDPPLTALEGRTVT 50 Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 R K+L + +G ++VHL +G + P P+ ++L Sbjct: 51 AAGRHGKFLDLATDGP-HLVVHLARAGWLRWKD---GLPEAPPRPGRGPLAL-------- 98 Query: 112 YRVIYNDPRRFGFMDLVETSLKY-----------QYPPLRTLGPEPADNSFNAIYLTHQF 160 R++ + P R GF DL E + + P + LGP+P D +F Sbjct: 99 -RLLLSGPERSGF-DLTEAGSRKGLAVYCVRDPGEVPGIARLGPDPLDGAFTREAFAGLL 156 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +K L +Q ++AGIGN Y E L A++SP R L + +LY+++ Sbjct: 157 RGVRHRIKGVLRDQSVIAGIGNAYSDEILHAARMSPYRLASDLTEEE---IAVLYEVM-- 211 Query: 221 IQKVLIDAIDAGGSSLRDYVH 241 G++LRD V Sbjct: 212 ------------GATLRDAVE 220 >gi|120405005|ref|YP_954834.1| formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] gi|119957823|gb|ABM14828.1| Formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] Length = 268 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 27/253 (10%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEH--TSCAKPIKNPQHNHV 99 +AA G S K+L +G + VHLG+ G+F +PI Q Sbjct: 36 AAAVNGHVFKKASAWGKHLFHHYQGGRVVHVHLGLYGTFTEWPLPDDRTQPIPVGQVRMR 95 Query: 100 TISLTNNTNTKKYRV--IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + T+ + V + +P D+ + + LGP+P + + Sbjct: 96 MLGAEYGTDLRGPTVCEVIEEP------DVADVVAR--------LGPDPLRSDADPELAW 141 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + K + L++Q ++AG+GN+Y E L+R + P R ++ D ++ Sbjct: 142 RRISKSRRPIGALLMDQTVIAGVGNVYRSELLFRHRTDPFRPGTTVT------SDEFAEM 195 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIV 275 ++ ++ + G + H G+ Y + VY + G+PC C IR + Sbjct: 196 WTDLVALMKVGVRRGKIVVVAPEHDHGAPSYREGRPRTYVYRRAGDPC-RVCATPIRTVE 254 Query: 276 QAGRSTFYCTYCQ 288 GR+ F+C CQ Sbjct: 255 LEGRNLFWCPACQ 267 >gi|54023295|ref|YP_117537.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54014803|dbj|BAD56173.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 265 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 95/258 (36%), Gaps = 41/258 (15%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + K+LL E + VHLG+ G F P+ V + Sbjct: 36 AALVDGRVLARCEAHGKHLLHHYEHGPVVHVHLGLYGKFYDAPVPMGPPV-----GEVRM 90 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP-----LRTLGPEPADNSFNAIYL 156 + T R + + PP L LGP+P + Sbjct: 91 RMVGATEGTDLRG--------------PAACEVLTPPEVDALLERLGPDPLRADADPDRA 136 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + + L++Q+++AG+GN+Y E L+R +SP R D+ Sbjct: 137 WQRIRRSRRPIGALLMDQRVLAGVGNVYRAEVLFRHGISPYRPG----------VDLDAA 186 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYV----HIDGSIGYFQNAFS--VYGKTGEPCLSNCGQM 270 + I L+D + G + R +V H G Y + VY + G C CG Sbjct: 187 EWKAIWADLVDLMPIGVETGRMHVVRPEHDHGEPSYAPDRPRTYVYRRPGAGC-RVCGSP 245 Query: 271 IRRIVQAGRSTFYCTYCQ 288 I V GR+ F+C CQ Sbjct: 246 IAHAVLDGRNLFWCPTCQ 263 >gi|25029390|ref|NP_739444.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|23494678|dbj|BAC19644.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 307 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LG +P + + + + + ++ + L++QK+ AG+GNIY E L+R +SP R Sbjct: 161 LGADPIRDDADPEPIRRRVQRSGRSIGSLLMDQKLFAGVGNIYRAETLFRLGISPFTPGR 220 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSV 255 + T + ++ ++ + + AG + H +G Sbjct: 221 EITDAQFT------SIWTDLVGLMKEGVTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYT 274 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +TG+PC CG IR V GR+ F+C CQ+ Sbjct: 275 YRRTGQPCYL-CGTPIRDQVMEGRNLFWCPECQR 307 >gi|326776189|ref|ZP_08235454.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326656522|gb|EGE41368.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 306 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 20/199 (10%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R +LR P +A G+ ++DV+ R K+LL EG L++ HL M G++ + + Sbjct: 23 LTRSDLRV--PRFATADLSGRTVLDVTARGKHLLTRFEGGLTLHSHLRMDGAWRV-YGPH 79 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P H I L N +T V Y R ++L+ TS + + + LGP+ Sbjct: 80 ERWRGGPGHQIRAI-LANAEHTA---VGY----RLPVLELLRTSEEDRA--VGHLGPDLL 129 Query: 148 DNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ L L ALL+Q+ +AGIGN+Y CE + A+++P +L Sbjct: 130 GPDWDPGRALDRLLTAPERPLGEALLDQRNLAGIGNVYKCELCFLARVTPWLPVGAL--- 186 Query: 207 NGTPKDILYKLIQEIQKVL 225 P L +L+ +++L Sbjct: 187 ---PDGALLRLVTLAERLL 202 >gi|182435554|ref|YP_001823273.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464070|dbj|BAG18590.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] Length = 308 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 20/199 (10%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R +LR P +A G+ ++DV+ R K+LL EG L++ HL M G++ + + Sbjct: 23 LTRSDLRV--PRFATADLSGRTVLDVTARGKHLLTRFEGGLTLHSHLRMDGAWRV-YGPH 79 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 + P H I L N +T V Y R ++L+ TS + + + LGP+ Sbjct: 80 ERWRGGPGHQIRAI-LANAEHTA---VGY----RLPVLELLRTSEEDRA--VGHLGPDLL 129 Query: 148 DNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++ L L ALL+Q+ +AGIGN+Y CE + A+++P +L Sbjct: 130 GPDWDPGRALDRLLTAPERPLGEALLDQRNLAGIGNVYKCELCFLARVTPWLPVGAL--- 186 Query: 207 NGTPKDILYKLIQEIQKVL 225 P L +L+ +++L Sbjct: 187 ---PDGALLRLVTLAERLL 202 >gi|108800564|ref|YP_640761.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119869703|ref|YP_939655.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] gi|108770983|gb|ABG09705.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119695792|gb|ABL92865.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] Length = 268 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 33/257 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ S K+L G I VHLG+ G F S P +P V + Sbjct: 36 AAMVDGRTFTGASAWGKHLFHHYRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRM 94 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + R P +D + S L LGP+P + + + Sbjct: 95 RMVGAGHGTDLR----GPTACEIVDEAQVSDI-----LARLGPDPLRRDADPAPAWTRLN 145 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + L++Q ++AG+GN+Y E L+R ++ P R +L D ++ + E+ Sbjct: 146 RSRRPVGALLMDQTVIAGVGNVYRSELLYRHRIDPYRLGTNLEPGE---FDAMWTDLVEL 202 Query: 222 QKVLI---------DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 KV + D G S R + VY + EPC CG + Sbjct: 203 MKVGVRRGKIVTVRPEDDHGAPSYRT----------GRPRTYVYRRALEPC-RICGTPVN 251 Query: 273 RIVQAGRSTFYCTYCQK 289 V GR+ F+C CQ+ Sbjct: 252 TAVLEGRNLFWCPTCQR 268 >gi|329934547|ref|ZP_08284588.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] gi|329305369|gb|EGG49225.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] Length = 270 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 31/239 (12%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + +HLG+ G P V + L ++T Y Sbjct: 52 KHLFLGFAATGWVHIHLGLFGKVAFGDAPAPPPTDT-----VRLRLADDT-------AYV 99 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R L+ K LGP+P + + + + + L++QK+V Sbjct: 100 DLRGPTTCALITEPEKRAI--HARLGPDPLRADADPAVAYRRISRSRTTIAALLMDQKVV 157 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAI------ 229 AG+GN+Y E L+R + P R R L + D++ + + ++ ID + Sbjct: 158 AGVGNVYRAEVLFRHGIDPYRPGRDLTPAAWDALWADLVDLMREGVRHNRIDTVRPAHTP 217 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +A G R +D G VY + G+ C CG +R AGR+ F+C CQ Sbjct: 218 EAMGRPPR----VDDHGGEVY----VYRRAGQAC-HLCGTPVRTAALAGRNLFWCPTCQ 267 >gi|327539149|gb|EGF25779.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 261 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 100/255 (39%), Gaps = 42/255 (16%) Query: 44 ATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 A G+ + V K+L E EGN + VHLG GS++ E +S +P PQ V + Sbjct: 38 AVSGRVLESVRAAGKHLFYEFEGNRIVHVHLGRYGSYV-EQSSPPEP---PQ-GQVRLRA 92 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 + T+T R P + +D + Q +LGP+P + Sbjct: 93 ISPTHTLDLR----GPSQCRLIDSED-----QKSICDSLGPDPLSGG-KKTEVWSAISAS 142 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + LL+Q IVAG+GNI+ EAL+ L P I N D +L + + K Sbjct: 143 GKPIGGLLLDQSIVAGVGNIFRAEALFETGLDP------HIPGNKLSPDQFTRLWKSLVK 196 Query: 224 VLIDAIDAG----------GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 ++ + G G L++ F +YGKT P CG I Sbjct: 197 MMKLGLRHGRIITVTAKEAGKPLKELAG--------NERFRIYGKTDCP---QCGGSIAV 245 Query: 274 IVQAGRSTFYCTYCQ 288 A R +C CQ Sbjct: 246 DSVASRKMHWCPECQ 260 >gi|32477685|ref|NP_870679.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32448239|emb|CAD77756.1| probable formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 294 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 101/256 (39%), Gaps = 44/256 (17%) Query: 44 ATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 A G+ + V K+L E EGN + VHLG GS++ E TS +P PQ V + Sbjct: 71 AVSGRVLESVRAAGKHLFYEFEGNRIVHVHLGRYGSYV-EQTSPPEP---PQ-GQVRLRA 125 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDL-VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + T+T R P + +D V+ S+ +LGP+P + Sbjct: 126 ISPTHTLDLR----GPSQCRLIDSEVQKSI------CDSLGPDPLSGG-KKTEVWSAISA 174 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + LL+Q IVAG+GNI+ EAL+ L P I N D +L + + Sbjct: 175 SGKPIGGLLLDQSIVAGVGNIFRAEALFETGLDP------HIPGNKLSPDQFTRLWKSLV 228 Query: 223 KVLIDAIDAG----------GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 K++ + G G L++ F +YGK P CG I Sbjct: 229 KMMKLGLKHGRIITVTAKEAGKPLKELAG--------NERFRIYGKMDCP---QCGGSIA 277 Query: 273 RIVQAGRSTFYCTYCQ 288 A R +C CQ Sbjct: 278 VDSVASRKMHWCPECQ 293 >gi|16759667|ref|NP_455284.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142560|ref|NP_805902.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213053352|ref|ZP_03346230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213421167|ref|ZP_03354233.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425379|ref|ZP_03358129.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213613308|ref|ZP_03371134.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646614|ref|ZP_03376667.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854151|ref|ZP_03382683.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824383|ref|ZP_06543976.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362531|sp|Q8Z8D2|END8_SALTI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|25289592|pir||AD0590 endonuclease VIII, DNA N-glycosylase with an AP lyase activity STY0771 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501960|emb|CAD05190.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhi] gi|29138191|gb|AAO69762.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 263 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 263 >gi|302534414|ref|ZP_07286756.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302443309|gb|EFL15125.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 268 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 32/251 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+++ K+L +EL G+ I +HLG+ G P + V + L N Sbjct: 41 GRELESAEAHGKHLFLEL-GDAWIHIHLGLFGKL-----GFGPAPAPPATDTVRLRLLNE 94 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + R P + E + LGP+P + + + + + Sbjct: 95 DHYADLR----GPTACALIGEGEKKAIHD-----RLGPDPLRPADDPGRAWTRISRSRTT 145 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKV 224 + L++QK+VAG+GN+Y E L+R + P R R L + + D+ + + +++ Sbjct: 146 VAALLMDQKVVAGVGNVYRAEVLFRHGIDPYRLGRDLTRAEWDAMWADLAALMREGMRRN 205 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ID + RD H+ ++G VY + PC CG IR A Sbjct: 206 RIDTV-------RDE-HLPEAMGRPPRVDDHGGEVYVYRRANMPC-HICGGEIRTADLAA 256 Query: 279 RSTFYCTYCQK 289 R+ F+C CQ+ Sbjct: 257 RNLFWCPTCQQ 267 >gi|188534437|ref|YP_001908234.1| endonuclease VIII [Erwinia tasmaniensis Et1/99] gi|188029479|emb|CAO97356.1| Endonuclease VIII [Erwinia tasmaniensis Et1/99] Length = 264 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 39/296 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K +TD+ F FP + G+++I + R K Sbjct: 1 MPEGPEIRRAADRLEAAIKGKVLTDVW-------FAFPALQTYQQMLVGERVIAIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I + S ++P K+ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRIIN-SGSEPAKSKRVLRVRLAAADKT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + L++ +P L +GP+ D + L+ +F ++ LL+ Sbjct: 108 SD----IQLLDAQGLATHPFLLRVGPDVLDMALTQQQVRERLLSTRFRRRQ--FGALLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+A+L+ K +L + + + G Sbjct: 162 QAFLAGLGNYLRVEILWQAQLAAQHKAETLSDKQLDALAEALLAVPRL------SYRTRG 215 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + H G++ +F+V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 216 QADENRHH--GAL----FSFNVFHRAGKAC-RRCGESIVKTMLSSRPFYWCPGCQK 264 >gi|259508429|ref|ZP_05751329.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259163983|gb|EEW48537.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 273 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LG +P + + + + + ++ + L++QK+ AG+GNIY E L+R +SP R Sbjct: 127 LGADPIRDDADPEPIRRRVQRSGRSIGSLLMDQKLFAGVGNIYRAETLFRLGISPFTPGR 186 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSV 255 + T + ++ ++ + + AG + H +G Sbjct: 187 EITDAQFT------SIWTDLVGLMKEGVTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYT 240 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +TG+PC CG IR V GR+ F+C CQ+ Sbjct: 241 YRRTGQPCYL-CGTPIRDQVMEGRNLFWCPECQR 273 >gi|189189872|ref|XP_001931275.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972881|gb|EDU40380.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 424 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS-----CAKPIKN-- 93 F A GKK++D ++ KY + L+ + H GM+G I++ AKP K Sbjct: 45 FKKAITGKKVVDARQQGKYFWLVLDTPPHPLFHFGMAGWLEIKNEETGYYRSAKPEKTEW 104 Query: 94 -PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEP-ADN 149 P+ + + + V + D RR + LV+ + + + PL+ GP+P D Sbjct: 105 PPKFWKFVLQMEEEPENE---VAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDK 161 Query: 150 SFNAI-YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 S + +L + K +K LL+Q ++GIGN E +++AKL P Sbjct: 162 SILTVEWLGKKLRSKKVPVKALLLDQANISGIGNWVGDEVMYQAKLHP 209 >gi|225020056|ref|ZP_03709248.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] gi|224947191|gb|EEG28400.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] Length = 275 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + T T + RFD + G+ ++ K+L IE Sbjct: 8 MPEGHVIHRLAQHLNREFTDTSPIVTSPQGRFDAQ---ARTLDGQPYLESDAYGKHLFIE 64 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + I +HLG+ GS E + K + + + +T R P+ Sbjct: 65 FDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATDTIAANLR----GPQ 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + E ++ + LG +P + + + +K N ++ + L++Q + G+ Sbjct: 114 WCRLITAEEKAVA-----VDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI--DAGGSSLRD 238 GNIY E L+R + P + + D++ + + ++ ID + + ++ Sbjct: 169 GNIYRAETLFRLGIDPFSSGKD-ADFDAIWADLVQLMAEGVKAGRIDTVRPEHTPEAMNR 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G VY + G+ C CG I V GR+ F+C CQK Sbjct: 228 PPRVDDHGG----EVYVYRRAGQKCYI-CGTPISEQVMEGRNLFWCPTCQK 273 >gi|315604606|ref|ZP_07879669.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313618|gb|EFU61672.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 345 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 23/160 (14%) Query: 142 LGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 LGP+P D ++ A H K ++ +++Q I+AG+GNIY +AL+ A +SP Sbjct: 197 LGPDPLDAGARSDAQAAERFAQVAHAKRRSIGEIVMDQSIIAGVGNIYRADALFLAGISP 256 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-DYVHIDGS----IGYFQN 251 RK ++ K ++++ ++ D ++ G ++ R D + D + I + Sbjct: 257 YRKG----------ANVSLKRLRDLWVLICDLMNRGLAAGRLDTMDPDEAPNPPIEGDEE 306 Query: 252 A--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 A + VY +TG CL CG IR + R F+C CQ+ Sbjct: 307 ASRWYVYHRTGRACL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|218699063|ref|YP_002406692.1| endonuclease VIII [Escherichia coli IAI39] gi|226741111|sp|B7NMR0|END8_ECO7I RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218369049|emb|CAR16803.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 263 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + +I ++ + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRL--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|333027094|ref|ZP_08455158.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332746946|gb|EGJ77387.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 271 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++QKIVAG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLREADDGEAAWARISRSRTTIAALLMDQKIVAGVGNVYRAEVLFRHGIDPARPGR 181 Query: 202 SL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 SL + + D+ + + ++ ID + +A G R H Sbjct: 182 SLSRAEWDALWADLRVLMREGVRLGRIDTVRPEHTPEAMGRPPRRDDH--------GGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PCL CG IR AGR+ F+C CQ Sbjct: 234 YVYRRAHLPCLI-CGTEIRTRELAGRNLFWCPRCQ 267 >gi|300788645|ref|YP_003768936.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299798159|gb|ADJ48534.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 268 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 29/239 (12%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + + + +HLG+ G+F +P+ V + L T+ R Sbjct: 51 GKHLFHDYGSHGIVHIHLGLYGTFGESPLPAPEPV-----GQVRLRLAGRTHWTDLR--- 102 Query: 117 NDPRRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 P R +D + ++K + LGP+P + + +++ L++Q Sbjct: 103 -GPTRCELLDPGQADAIKAR------LGPDPLRRDAKPELAWARVSRSKTSIAALLMDQA 155 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN+Y E L+R ++P+ R+L + + L ++ ++ D + G Sbjct: 156 VLAGVGNVYRAEVLFRHGVAPLTPGRALD------RPLWDDLWADLVILMRDGVRVGRID 209 Query: 236 LRDYVHIDGSIGYFQ------NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H+ ++G VY + G+PCL CG + GR+ ++C CQ Sbjct: 210 TVRPEHLPEAMGRAARVDRHGGEVYVYRRAGDPCLV-CGTPVAHSELVGRNLYWCPKCQ 267 >gi|293413990|ref|ZP_06656639.1| endonuclease VIII [Escherichia coli B185] gi|291434048|gb|EFF07021.1| endonuclease VIII [Escherichia coli B185] Length = 263 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTD-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|300937827|ref|ZP_07152623.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] gi|300457192|gb|EFK20685.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] Length = 263 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 40/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + K ++Y+ Sbjct: 54 ALLTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTVD--KTILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D L+ +F +N LL+ Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRF--RNRQFAGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW+ L+ K + L N D L + EI + Sbjct: 161 QAFLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------S 209 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 210 YATRGRVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|269977888|ref|ZP_06184842.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933854|gb|EEZ90434.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 389 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 31/165 (18%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + +L++Q ++AG+GNIY EAL+ A+LSP R Sbjct: 239 LGPDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGNIYRAEALFAARLSPFVPAR 298 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG-----------------GSSLRDYVHIDG 244 + + L ++ + + + +++G ++ R+ ID Sbjct: 299 EVSERK------LRRVWDWLVEYMARGVESGRITTIGREDAAAFAASEAAAGREAQAID- 351 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 352 ------RRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|318060115|ref|ZP_07978838.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actG] gi|318076316|ref|ZP_07983648.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actF] Length = 271 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++QKIVAG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNVYRAEVLFRHGIDPARPGR 181 Query: 202 SL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 SL + + D+ + + ++ ID + +A G R H Sbjct: 182 SLSRAEWDALWADLRVLMREGVRLGRIDTVRPEHTPEAMGRPPRRDDH--------GGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PCL CG IR AGR+ F+C CQ Sbjct: 234 YVYRRAHLPCLI-CGTEIRTRELAGRNLFWCPRCQ 267 >gi|302519076|ref|ZP_07271418.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302427971|gb|EFK99786.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 273 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++QKIVAG+GN+Y E L+R + P R R Sbjct: 124 LGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNVYRAEVLFRHGIDPARPGR 183 Query: 202 SL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 SL + + D+ + + ++ ID + +A G R H Sbjct: 184 SLSRAEWDALWADLRVLMREGVRLGRIDTVRPEHTPEAMGRPPRRDDH--------GGEV 235 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PCL CG IR AGR+ F+C CQ Sbjct: 236 YVYRRAHLPCLI-CGTEIRTRELAGRNLFWCPRCQ 269 >gi|56414155|ref|YP_151230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363077|ref|YP_002142714.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821335|sp|Q5PCL7|END8_SALPA RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741124|sp|B5BC82|END8_SALPK RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|56128412|gb|AAV77918.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094554|emb|CAR60074.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 263 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ I + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIITRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|238911659|ref|ZP_04655496.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 263 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|194434000|ref|ZP_03066271.1| endonuclease VIII [Shigella dysenteriae 1012] gi|194417765|gb|EDX33863.1| endonuclease VIII [Shigella dysenteriae 1012] gi|332093762|gb|EGI98816.1| endonuclease VIII [Shigella boydii 5216-82] gi|332096522|gb|EGJ01518.1| endonuclease VIII [Shigella dysenteriae 155-74] Length = 263 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + + R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSQLIGQHVTHLETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|159901996|gb|ABX10726.1| DNA glycosylase/endonuclease [uncultured planctomycete 13FN] Length = 265 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 42/250 (16%) Query: 50 IIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 + V R K+LLI + +L + H+GM+GS+ I + + P V + T Sbjct: 43 VTGVEARGKHLLIHFDSDLVVHSHMGMTGSWHIYRLT--DSWQKPDTQAVLV-----LKT 95 Query: 110 KKYRVIYNDPRRFGFMDLV-ETSLKYQYPPLR----TLGPEPADNSFNAIYLTHQFHKKN 164 + V+ P+ +++V ET L++ + LGP +D+ ++L+ + Sbjct: 96 AAWCVVCFTPK---LLEIVSETKLRWNSWLTKLGPDILGPPISDD----VFLSRMRSQSQ 148 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + L+NQ +V+GIGN+Y E L + P +T + ++ L L + Sbjct: 149 HAIGEVLMNQNVVSGIGNVYKSEILHLEHIHP--ETLVAVLDDAA----LLSLRDRAVFL 202 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFS---VYGKTGEPCLSNCGQMI--RRIVQAGR 279 + ++ G + R F+ S VYG+ G+ CL CG +I +R R Sbjct: 203 MKRNLNNGARTTR-----------FRGEASRLWVYGRRGQHCL-KCGTIILMQRHGDNAR 250 Query: 280 STFYCTYCQK 289 ST++C CQK Sbjct: 251 STYFCPACQK 260 >gi|184200752|ref|YP_001854959.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580982|dbj|BAG29453.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 306 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P D + K + L+ Q +VAGIGNI+ E+L+R + P+ Sbjct: 163 LGPDPLDPQADPEPFLAAAGKSRRPIGVLLMEQHVVAGIGNIFRAESLFRRGVDPMAPGT 222 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGK 258 SL + + L +L +E ++ + G + D + + + ++A VY + Sbjct: 223 SLTRED------LLELWEENVALMAVGVRVGRIITTDPEDRPGVPDTEAWPEHANYVYHR 276 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+PCL CG + + GR ++C CQ Sbjct: 277 HGQPCL-RCGATVLKTDLNGRGLYWCPSCQ 305 >gi|331695758|ref|YP_004331997.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] gi|326950447|gb|AEA24144.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] Length = 278 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 5/149 (3%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + +S L L++QK+VAG+GN+Y E L+R + P R Sbjct: 127 LGPDPLRRDADPDLAWERIRRSSSPLATLLMDQKVVAGVGNVYRAELLFRHGIDPQLPGR 186 Query: 202 SLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 +L + + D++ + +++ ID + R G VY + Sbjct: 187 ALPRGTWDAMWADLVVLMRDGVRRGRIDTVAPEHDPRRRGE--PGRKDRHGGEVYVYRRQ 244 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G PCL CG + A R+ F+C CQ Sbjct: 245 GMPCLV-CGTPVLHAEHAARNLFWCPTCQ 272 >gi|307700125|ref|ZP_07637171.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] gi|307614674|gb|EFN93897.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] Length = 389 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 31/165 (18%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + +L++Q ++AG+GNIY EAL+ A+LSP R Sbjct: 239 LGPDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGNIYRAEALFAARLSPFVPAR 298 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG-----------------GSSLRDYVHIDG 244 + + L ++ + + + +++G ++ R+ +D Sbjct: 299 EVSERK------LRRVWDWLVEYMARGVESGRITTIGREDAAAFAASEAAAGREAQAVD- 351 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 352 ------QRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 >gi|283834003|ref|ZP_06353744.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] gi|291070140|gb|EFE08249.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] Length = 263 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K + D+ + L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLMDVWFAFEQLK-----PYQSQLIGQRVTRLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T PQ + V + + T K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVETGNV-----PQTSRV-LRVRLQTRDKTI-LLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 +D++ +P L+ +GP+ D + A L+ +F +N LL+Q Sbjct: 109 ----IDMLTPEQLTTHPFLQRVGPDVLDLRLTPDDVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K L D L + +I ++ L+D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKASQLSDEQ---LDALAHALLDIPRLSYNTRGLVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GE C CG +I + + R ++C CQ Sbjct: 220 KHHGALFR---------------FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|330466398|ref|YP_004404141.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] gi|328809369|gb|AEB43541.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] Length = 264 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 33/260 (12%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAK 89 F P + G ++ D + R K+LLI L+ + ++ HL M G++ + + + Sbjct: 28 FRVPQLATTDLTGWRVTDCASRGKHLLIRLDEPTGAAHWTLHSHLRMDGTWRV-YAPGER 86 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P H + + L+ T+T V Y+ + LV T+ +++ + LGP+ Sbjct: 87 WSARPAHL-IRVVLSTATSTA---VGYH----LHEVALVPTAEEHRL--VGHLGPDLLGT 136 Query: 150 SFNAIYLTHQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 ++ + + + ++ ALL+Q+ +AG+GN+Y CE L+ ++P R+ + + Sbjct: 137 DWDPQEAVRRLADRPAESIAEALLDQRNLAGVGNLYKCELLFLRGINP----RTRVAD-- 190 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 P L LI +L A + G R GS+ Q ++ VYG+ +PC CG Sbjct: 191 VPD--LAGLITLAHDLL--AANRG----RWTQSTTGSLRRGQTSY-VYGRRAQPC-RRCG 240 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 IR+ R T++C CQ Sbjct: 241 TAIRKEELGERVTYWCPRCQ 260 >gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 363 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/302 (23%), Positives = 115/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F A GKK++ ++ Sbjct: 1 MPELAEVFRIVHFIRQHLVGKTLTKVSAQEDPIIYGKVGTSAAEFQKAMEGKKVVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHPVMHFGMAGWLKIRDADTYYYRTDKPEDKEWPPKYWKFLLETDGEPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + PL+ GP+P + +L ++ K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPADDIRNHTPLKENGPDPVVDKDIVTETWLANKLRSKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L D + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLND------DQIKELNSAIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ +S K L N G I I GR++ Sbjct: 235 SVDLLADSEKFPEHW-----LFKHRWSKGKKNVASALPN-GDKITFITVGGRTSAVVPNV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|238920756|ref|YP_002934271.1| endonuclease VIII [Edwardsiella ictaluri 93-146] gi|238870324|gb|ACR70035.1| endonuclease VIII [Edwardsiella ictaluri 93-146] Length = 291 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 108/294 (36%), Gaps = 38/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + T+T + +L +A G ++ + R K L Sbjct: 1 MPEGPEIRRVADELRAAVGGGTLTQVWFGVPSL-----QRHAAGLVGCRVTTIEARGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + T P SL T + ++ Sbjct: 56 LIHFSNGVSMYSHNQLYGIWRVAATGQIPPTSR--------SLRVRLETAERAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + + + L LL+Q+ + Sbjct: 108 D---IQLAPRAQILRHPFLLRIGPDVLDPALTEVQVRERLCSPAFRRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GS 234 AG+GN E LW+ +L P R+ L T + + V ID G G+ Sbjct: 165 AGLGNYLRVEILWQVELPPQRRATDLTPAQLTSLCHALLAVPRLSYVTRGQIDTGRHHGT 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R F V+ + GE C CG + R A R + C CQ Sbjct: 225 LFR---------------FRVFQREGESC-ERCGTTLIRAQVASRPFYGCPGCQ 262 >gi|168230606|ref|ZP_02655664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240579|ref|ZP_02665511.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264331|ref|ZP_02686304.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467716|ref|ZP_02701553.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194450919|ref|YP_002044759.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468700|ref|ZP_03074684.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|226741122|sp|B4TBC8|END8_SALHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194409223|gb|ACF69442.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455064|gb|EDX43903.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195629189|gb|EDX48557.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205334680|gb|EDZ21444.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339977|gb|EDZ26741.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347178|gb|EDZ33809.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 263 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|169631801|ref|YP_001705450.1| putative DNA glycosylase Nei [Mycobacterium abscessus ATCC 19977] gi|169243768|emb|CAM64796.1| Putative DNA glycosylase Nei [Mycobacterium abscessus] Length = 254 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 30/254 (11%) Query: 37 FPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 P + G+++ V R K+L I + G SI HL M GS+ I +P P Sbjct: 30 VPRFATVDLSGQRVEGVIARGKHLFIRV-GGASIHSHLKMDGSWRI--MPAGRP--GPTW 84 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IY 155 NH ++ ++ G +D+V+ + + + LGP+ ++ + Sbjct: 85 NHRIRAVLTTDDSVAVGT------SLGILDVVDR--RREGDVVGHLGPDLLGTDWDPDVA 136 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + + + L ALL+Q+++AGIGN+Y E + A L P + + G P Sbjct: 137 VERLIARSDEALSAALLDQRVMAGIGNVYSNELCFLAGLLPT----TAVGRLGDPA---- 188 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L++ ++ A S R D G VYG+ G+PC CG I R Sbjct: 189 GLVERAHTLM----HANKDSYRRTTTGDPRSG---RELWVYGRHGKPC-RRCGTPIARDQ 240 Query: 276 QAGRSTFYCTYCQK 289 R ++C CQ+ Sbjct: 241 GLPRVAYWCPNCQR 254 >gi|168238871|ref|ZP_02663929.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734233|ref|YP_002113835.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226741125|sp|B4TQ44|END8_SALSV RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194709735|gb|ACF88956.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288348|gb|EDY27729.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 263 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTADQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|38234839|ref|NP_940606.1| putative DNA repair glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|38201103|emb|CAE50827.1| Putative DNA repair glycosylase [Corynebacterium diphtheriae] Length = 284 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 15/153 (9%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LG +P + N + + + + ++ + L++QK+ AG+GNIY E L+R +SP + Sbjct: 139 LGADPLRDDANFLAIKTKVARSRRSIGSLLMDQKLFAGVGNIYRAETLFRLGISPFILGK 198 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSV 255 + + + +D+ + + + + + ID + +A G R H G Y V Sbjct: 199 DVAELDLIWQDLRFLMREGVNRGRIDTVRPEHTPEAMGRPPRKDDH--GGEVY------V 250 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G+PC CG I GR+ F+C CQ Sbjct: 251 YRRYGQPCYV-CGTPILECTMEGRNLFWCPTCQ 282 >gi|302545408|ref|ZP_07297750.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302463026|gb|EFL26119.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 270 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 41/261 (15%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + K+L ++ + VHLG+ G + P + V + Sbjct: 37 AALVDGQVLQHAEAHGKHLFLDFAATGWVHVHLGLFGKYTFGPAPAPPPTET-----VRL 91 Query: 102 SLTNNTNTKKYR-----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL 156 L R + DP + D LGP+P + Sbjct: 92 RLAGPGGYADLRGPTACALITDPEKQAIHD--------------RLGPDPLRPDDDGDGA 137 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL--IQNNGTPKDIL 214 + + ++ L++QKIVAG+GN+Y E L+R + P R R+L + + D+ Sbjct: 138 WTRISRSRVSVAALLMDQKIVAGVGNVYRAEVLFRHGIDPYRPGRALARAEWDAIWSDLA 197 Query: 215 YKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 + + ++ ID + +A G R +D G VY + G+PCL C Sbjct: 198 ELMREGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGG----EVYVYRRAGQPCLV-CD 248 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 IR A R+ F+C CQ+ Sbjct: 249 GEIRTAGLAARNLFWCPACQQ 269 >gi|322615838|gb|EFY12756.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621234|gb|EFY18091.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623654|gb|EFY20492.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628926|gb|EFY25706.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634906|gb|EFY31636.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636566|gb|EFY33270.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641775|gb|EFY38408.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647807|gb|EFY44287.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651863|gb|EFY48232.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652640|gb|EFY48989.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658448|gb|EFY54711.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664949|gb|EFY61140.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668381|gb|EFY64537.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670531|gb|EFY66664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675271|gb|EFY71347.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679697|gb|EFY75738.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684827|gb|EFY80826.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193145|gb|EFZ78364.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200596|gb|EFZ85671.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202268|gb|EFZ87316.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205465|gb|EFZ90431.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213496|gb|EFZ98289.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215330|gb|EGA00075.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220916|gb|EGA05350.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228075|gb|EGA12211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231019|gb|EGA15135.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234148|gb|EGA18237.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238157|gb|EGA22215.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243592|gb|EGA27610.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247384|gb|EGA31343.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251372|gb|EGA35244.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258489|gb|EGA42161.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260643|gb|EGA44252.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264715|gb|EGA48217.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272238|gb|EGA55650.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|204930016|ref|ZP_03221037.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321010|gb|EDZ06211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQITTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|297194363|ref|ZP_06911761.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] gi|197720982|gb|EDY64890.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] Length = 271 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 42/261 (16%) Query: 42 SAATRGKKIID-VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 SAA +++D K+L + E + +HLG+ G P + V Sbjct: 35 SAALLDGRVLDGADAHGKHLFLGFEDIGWVHIHLGLFGKLGFGPAPAP-----PATDTVR 89 Query: 101 ISLTNNTNTKKYR-----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + ++N + R + P + D LGP+P S + Sbjct: 90 LRVSNEEHYADLRGPTTCALITGPEKRAIHD--------------RLGPDPLRPSDDPDR 135 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDI 213 + + + + L++QKI+AG+GN+Y E L+R + P R + L Q + +D+ Sbjct: 136 AWARISRSRTTIAALLMDQKIIAGVGNVYRAEVLFRHGIDPYRAGKDLTRRQWDAIWEDL 195 Query: 214 LYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 + + ++ ID + +A G R +D G VY +T PCL C Sbjct: 196 AALMREGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGGEVY----VYRRTNMPCLV-C 246 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 IR + R+ F+C CQ Sbjct: 247 DTRIRTAALSARNLFWCPACQ 267 >gi|302331706|gb|ADL21900.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308277398|gb|ADO27297.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 281 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LG +P + + + + ++ + L++Q++ AG+GNIY E+L+R +SP R Sbjct: 135 LGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGISPFTPGR 194 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSV 255 + +D++Y + + ++ ID + A G + R H V Sbjct: 195 EVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDH--------GGEVYV 246 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G+PC CG I V GR+ F+C CQ Sbjct: 247 YRRLGQPCYV-CGTPISGQVMEGRNLFWCPTCQ 278 >gi|168820144|ref|ZP_02832144.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343055|gb|EDZ29819.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084996|emb|CBY94785.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTSEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|300859464|ref|YP_003784447.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686918|gb|ADK29840.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302207145|gb|ADL11487.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] Length = 273 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LG +P + + + + ++ + L++Q++ AG+GNIY E+L+R +SP R Sbjct: 127 LGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGISPFTPGR 186 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSV 255 + +D++Y + + ++ ID + A G + R H V Sbjct: 187 EVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDH--------GGEVYV 238 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G+PC CG I V GR+ F+C CQ Sbjct: 239 YRRLGQPCYV-CGTPISGQVMEGRNLFWCPTCQ 270 >gi|237730681|ref|ZP_04561162.1| endonuclease VIII [Citrobacter sp. 30_2] gi|226906220|gb|EEH92138.1| endonuclease VIII [Citrobacter sp. 30_2] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ + L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLTDVWFAFEQLK-----PYQSQLIGQRVTQLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H + G + + T K PQ + V + + T+ K ++Y+ Sbjct: 56 LTHFSNGQTLYSHNQLYGVWRVVDTG-----KIPQTSRV-LRVRLQTHDKTI-LLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + A L+ +F +N LL+Q Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDLRLTPDEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LIDAI 229 +AG+GN E LW+ L+ K L D L + +I ++ L+D Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKASQLSDEQ---LDQLANALLDIPRLSYTTRGLVDEN 219 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ R F V+ + GE C CG +I + + + R ++C CQ Sbjct: 220 KHHGALFR---------------FKVFHRDGETC-ERCGGIIEKTMLSSRPFYWCPGCQ 262 >gi|157146685|ref|YP_001454004.1| endonuclease VIII [Citrobacter koseri ATCC BAA-895] gi|166920088|sp|A8AJA5|END8_CITK8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157083890|gb|ABV13568.1| hypothetical protein CKO_02451 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFSQLK-----PYESPLIGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + N K ++Y+ Sbjct: 56 LTHFSQGLTLYSHNQLYGVWRVVETGNIPATTR-------VLRVNLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + A L+ +F +N LL+Q Sbjct: 109 ----IEMLTPEQLATHPFLQRVGPDVLDPRLTPSDVKARLLSARF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K KD+ + ++ + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKA----------KDLSDQQLEALSHALLD-IPRLSYT 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R + G F V+ + GE C CG +I + + R ++C +CQ Sbjct: 212 TRGQADENTHHGALFR-FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQ 262 >gi|200389798|ref|ZP_03216409.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602243|gb|EDZ00789.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIGTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|227502181|ref|ZP_03932230.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077005|gb|EEI14968.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 33/227 (14%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + +HLG+ G E + + I + N + R P+ L+ Sbjct: 67 LYIHLGLIGKLSFE-------PREENRGQIRIRIDNGAQAAQLR----GPQ----FCLLL 111 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 T YQ L +G +P + L + HK ++ + +++Q + AG+GNIY EAL Sbjct: 112 TEEDYQ-ARLTKVGQDPLRVDADPEALWTKVHKSRRSIGSLMMDQHLYAGVGNIYRAEAL 170 Query: 190 WRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVH 241 +RA LSP + + + KD++ + ++ ID + +A G R H Sbjct: 171 FRADLSPFTPGKDVSRETFFAIWKDLVELMNYGVEHGRIDTVRAEHSPEAMGREPRKDDH 230 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y VY + G PC CG I V GR+ F+C CQ Sbjct: 231 --GGEVY------VYRRAGLPCYV-CGTPIAEQVMEGRNLFWCPTCQ 268 >gi|82775980|ref|YP_402327.1| endonuclease VIII [Shigella dysenteriae Sd197] gi|309786373|ref|ZP_07680999.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331651712|ref|ZP_08352731.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] gi|123563198|sp|Q32IL9|END8_SHIDS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81240128|gb|ABB60838.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella dysenteriae Sd197] gi|308925767|gb|EFP71248.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331049990|gb|EGI22048.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] Length = 263 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + + T L T ++ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG--------EESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 + + ++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 106 ASDIEMLTPEQLTM---HPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|254382780|ref|ZP_04998137.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] gi|194341682|gb|EDX22648.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] Length = 268 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 32/256 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+++ K+L +EL G+ I +HLG+ G P + V + Sbjct: 36 AALLDGRELESAEAHGKHLFLEL-GDAWIHIHLGLFGKLGFGPAPAP-----PATDTVRL 89 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 L N + R P + E + LGP+P + + Sbjct: 90 RLLNADHYADLR----GPTACALIGEGEKKAIHD-----RLGPDPLRPGDDPDRAWRRVS 140 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQ 219 + + + L++QK++AG+GN+Y E L+R + P R + L + + D++ + + Sbjct: 141 RSRTTVAALLMDQKVIAGVGNVYRAEVLFRHGIDPYRLGKDLTRAEWDALWADLVLLMRE 200 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRR 273 ++ ID + RD H+ ++G VY + PC CG IR Sbjct: 201 GVRNNRIDTV-------RDE-HLPEAMGRPPRVDDHGGEVYVYRRANMPC-HICGDEIRT 251 Query: 274 IVQAGRSTFYCTYCQK 289 A R+ F+C CQ+ Sbjct: 252 AGLAARNLFWCPGCQR 267 >gi|320179452|gb|EFW54409.1| Endonuclease VIII [Shigella boydii ATCC 9905] Length = 263 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + + R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKSYQSQLIGQHVTHLETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQV 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|289568914|ref|ZP_06449141.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|289542668|gb|EFD46316.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 158 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 5 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 62 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 63 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 109 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY +TG PC CG +R + A +S YC CQ Sbjct: 110 VYARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|302560643|ref|ZP_07312985.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302478261|gb|EFL41354.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 273 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R ++ P R R Sbjct: 126 LGPDPLRPDADPDQAYRRISRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHRVDPYRVGR 185 Query: 202 SLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 + Q +G D++ + + ++ ID + +A G R +D G Sbjct: 186 DITRAQWDGIWADLVALMREGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGG----EV 237 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + PC CG IR A R+ F+C CQ+ Sbjct: 238 YVYRRANLPC-HLCGGEIRTAGLAARNLFWCPACQR 272 >gi|219556809|ref|ZP_03535885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 160 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 65 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 111 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY +TG PC CG +R + A +S YC CQ Sbjct: 112 VYARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|225559783|gb|EEH08065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 383 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 22/215 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRTYLVGKTITRVHAQDDPIVFGKAGTSAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----------AKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA-DNSFNAI-YLTHQFH 161 ++N++ + DPRR + LV+ ++ PL+ GP+P D + +L + Sbjct: 121 SSNSE---AAFVDPRRLARVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 K +K LL+Q ++GIGN E L+ AK+ P Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHP 212 >gi|331682145|ref|ZP_08382767.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] gi|331080569|gb|EGI51745.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] Length = 263 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTMRVLRVKLQTVD--KTILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLITHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|118473590|ref|YP_888944.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118174877|gb|ABK75773.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 268 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 114/291 (39%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + T + + RF +AA G+ + K+L Sbjct: 1 MPEGHTLHRLARLHQRRFGRTAVVVSSPQGRFA---DGAAAVSGQIFKRATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSC--AKPIKNPQHNHVTISLTNNTNTKKYRV--IYNDP 119 +G + +HLG+ G+F A P+ Q I T+ + V + +P Sbjct: 58 YDGGRVVHIHLGLYGAFTEWPVPAELALPLPVGQVRMRIIGAQYGTDLRGPTVCELITEP 117 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++V+ K LGP+P +A + K + L++Q ++AG Sbjct: 118 ------EIVDVIAK--------LGPDPLRPDADASLAWKRITKSRRPIGALLMDQTVMAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E L+R + P L + D ++ + + KV + G + Sbjct: 164 VGNVYRSELLFRHGIDPYLPGTQL---DAAEFDAMWTDLVALMKV---GVRRGKIVVVRP 217 Query: 240 VHIDGSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H G+ Y + VY + GEPC CG +R GR+ F+C CQ Sbjct: 218 EHDHGAPSYRTGRPRTYVYRRAGEPC-RICGTPVRTAELEGRNLFWCPTCQ 267 >gi|288936498|ref|YP_003440557.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] gi|288891207|gb|ADC59525.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] Length = 263 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 42/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K +TD F FP + + G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGQPLTDAW-------FAFPQLQPYQSLLIGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + + P N V +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAG-----EQPASNRVL--RVRLQTARKAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-----AIYLTHQF-HKKNSNLKNALL 172 ++++ +P L +GP+ D + A L+ +F H++ S L LL Sbjct: 107 SD----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGL---LL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN E LW+ LS RK L + I + D Sbjct: 160 DQAFLAGLGNYLRVEILWQVGLSGKRKAAELSDSQLDALAHALLAIPRLSYHTRGQAD-- 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D H G++ F+ F V+ + GE C CG +I + + R ++C CQ Sbjct: 218 -----DNKH-HGAL--FR--FKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|311696998|gb|ADP99871.1| endonuclease 8 [marine bacterium HP15] Length = 271 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 33/268 (12%) Query: 35 FDFPH--HFSAATRGKKIIDVSRRAKYLL-----IELEGNLSIIVHLGMSGSFIIEHTSC 87 F F H F A RG+++ V R+K +L + +G + H + G + + Sbjct: 19 FAFEHLKPFENALRGRRVERVEARSKAVLGFFEATDEDGPWCVYSHNQLYGKWRM----- 73 Query: 88 AKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 KP + P N + ++ KK +Y+ + LV + P L LGP+P Sbjct: 74 GKPDREPSTNRQLRFAIIG---PKKAARLYS----ASDIQLVRPDELSEVPYLSRLGPDP 126 Query: 147 ADNSFNAIYLTHQFHKK---NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 + + L F K NL LL+Q VAGIGN E L+ A++SP + R L Sbjct: 127 LNQEVSIDQLLAVFDDKRFRGRNLGGLLLDQAFVAGIGNYLRSEILFEARVSPRARPRDL 186 Query: 204 IQNNGTP-KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGKTG 260 + + + + L+Q ++ G ++ D G+ Q V+ + G Sbjct: 187 DADQQSRLAEAILTLVQRTYRL------KGITNPPDRAERLKQEGWTFGQRRHMVFNRDG 240 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 E C +C + + + A R +YC CQ Sbjct: 241 ERC-HDCASPLVKTMMASRRLYYCPECQ 267 >gi|15800417|ref|NP_286429.1| endonuclease VIII [Escherichia coli O157:H7 EDL933] gi|15829993|ref|NP_308766.1| endonuclease VIII [Escherichia coli O157:H7 str. Sakai] gi|168763993|ref|ZP_02789000.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217326241|ref|ZP_03442325.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|291281646|ref|YP_003498464.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|21362529|sp|Q8X9C6|END8_ECO57 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|12513625|gb|AAG55037.1|AE005249_8 endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. EDL933] gi|13360197|dbj|BAB34162.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. Sakai] gi|189365928|gb|EDU84344.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217322462|gb|EEC30886.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|290761519|gb|ADD55480.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|320193108|gb|EFW67748.1| Endonuclease VIII [Escherichia coli O157:H7 str. EC1212] gi|320643356|gb|EFX12536.1| endonuclease VIII [Escherichia coli O157:H- str. 493-89] gi|320648705|gb|EFX17338.1| endonuclease VIII [Escherichia coli O157:H- str. H 2687] gi|320654289|gb|EFX22342.1| endonuclease VIII [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659922|gb|EFX27464.1| endonuclease VIII [Escherichia coli O55:H7 str. USDA 5905] gi|326341550|gb|EGD65340.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1044] Length = 263 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + + T L T ++ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG--------EESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 106 ASD---IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|163841995|ref|YP_001626400.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162955471|gb|ABY24986.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 292 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 104/291 (35%), Gaps = 80/291 (27%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K L ++ + VHLG+ G++ Sbjct: 36 AARIDGEILVAARAHGKQLFVQFSNQAILRVHLGLYGAWDF------------------- 76 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP------------------LR--- 140 T + PRR G +L L Y+ PP LR Sbjct: 77 ---GGDATFRGASSIGAPRRLGERELASEDLPYKGPPEPIGAVRLRLVSQHGWADLRGPS 133 Query: 141 ---------------TLGPEPADNSFNAIY-----LTHQFHKKNSNLKNALLNQKIVAGI 180 LGP+P ++ A + + L+ Q +VAGI Sbjct: 134 ACEVLTAAEARAIQAKLGPDPLNSGQEATLAGEAEFLRRVRSSARPVAVLLMAQNVVAGI 193 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI---DAGGSSLR 237 GN+Y E L+RAK++P+ + L I + +++ +DA+ + G + R Sbjct: 194 GNVYRAELLFRAKINPMLSGKQLS-------------ITKARELWLDAVVLLNRGVTDGR 240 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + VY + G+PC S CG I V AGR+ F+C CQ Sbjct: 241 IITTEPGDCDEPADVHYVYKRVGQPCFS-CGTEIAGSVLAGRNLFFCPSCQ 290 >gi|302529039|ref|ZP_07281381.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302437934|gb|EFL09750.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 269 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 33/251 (13%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ ++ K+L ++ VHLG+ G+F P+ V + L Sbjct: 41 GQVLVSAEAYGKHLFHHYGPLGTVHVHLGLYGTFGEAPLPETAPV-----GQVRMRLVGR 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 T+ R P R +D + ++K + LGP+P + + + Sbjct: 96 THWTDLR----GPTRCELLDPAQVDAIKAR------LGPDPLRRDAKPDRAWERISRSRT 145 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQK 223 + L++Q ++AG+GN+Y E L+R +SP+ RSL + + D++ + ++ Sbjct: 146 TIAALLMDQAVLAGVGNVYRAEVLFRHGISPMVPGRSLDRALWDAMWADLVTLMRAGVRV 205 Query: 224 VLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 ID + A G + R+ H VY + G PCL CG + + A Sbjct: 206 GRIDTVAPEHLPAAMGRAPREDRH--------GGEVYVYRRAGMPCLI-CGTPVAQKELA 256 Query: 278 GRSTFYCTYCQ 288 R+ ++C CQ Sbjct: 257 ARNLYWCPACQ 267 >gi|198244062|ref|YP_002214697.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226741119|sp|B5FNF0|END8_SALDC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197938578|gb|ACH75911.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622453|gb|EGE28798.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 263 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKVRLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G S Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQS 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|320664747|gb|EFX31885.1| endonuclease VIII [Escherichia coli O157:H7 str. LSU-61] Length = 263 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + + T L T ++ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG--------EESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 106 ASD---IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNEAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|297562590|ref|YP_003681564.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847038|gb|ADH69058.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 293 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + +++ L+ Q +VAGIGNIY E+L+RA L P+ R Sbjct: 149 LGPDPLRDDADPERAWRVVSRSRTSIAALLMRQDVVAGIGNIYRAESLFRAGLDPMTPGR 208 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG--SSLRDY-VHIDGSIGYFQNAFSVYGK 258 L D +L ++ +L D + G ++L ++ D ++ V + Sbjct: 209 DLT------ADQWSRLWDDLSGLLRDGVRDGYIITTLPEHRPDPDARPVPRPDSLYVCYR 262 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 TGEPC C + AGR+ ++C CQ Sbjct: 263 TGEPC-RVCSSPVASAELAGRTLYWCPRCQ 291 >gi|304390860|ref|ZP_07372812.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325743|gb|EFL92989.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 342 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P N + + + AL++Q ++AG+GNIY E L+ A+L P R Sbjct: 192 LGPDPLRPDCNCGEFVKRCATRQKGIGEALMDQSVIAGVGNIYRAEVLYAARLDPFTPAR 251 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDY-VHIDGSIG------YFQN 251 + L ++ +++ L +++G +S DY V ++ + + Sbjct: 252 EVSSRK------LRRIWDWLEEYLPLGVESGRITTTSPDDYAVFVERELAAGREPRAIDS 305 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PCL C ++ + GR ++C CQ+ Sbjct: 306 RYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|194446665|ref|YP_002039966.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226741123|sp|B4SZD3|END8_SALNS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194405328|gb|ACF65550.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 263 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEVC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|296425340|ref|XP_002842200.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638460|emb|CAZ86391.1| unnamed protein product [Tuber melanosporum] Length = 394 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 30/226 (13%) Query: 1 MPELPEVEIIRRNLMM-----VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPEL +V + L +KN+T D + K+ F +A G+ ++D Sbjct: 1 MPELVQVARLAGRLKKHLAGKTLKNVTAMDDPVVFKDTTA---KKFISAVEGRTVLDAKS 57 Query: 56 RAKYLLIELEGNLSIIVHLGMSGS--FIIEHTSCAKPIKNPQHN---------HVTISLT 104 +YL +E++ ++HLG++G F + S + P+ H+ I + Sbjct: 58 LGRYLWLEMDKPPHPVMHLGIAGWVFFKSDPYSHYYAREKPEFTNWPPKGEIFHLKIHGS 117 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + ++ DPRR G + L++ S K + PL LGP+P +L +F Sbjct: 118 QDE------AMFADPRRLGRLRLMDCSSKDIPKQAPLNDLGPDPLQTEITMEWLRQKF-T 170 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 K+S + L +QK +AG G+ E L++A++ P + R N+G Sbjct: 171 KHSPARLLLADQKNIAGFGSWMSEEILYQARIHPEFQGRKF--NDG 214 >gi|329946399|ref|ZP_08293966.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328527375|gb|EGF54373.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 340 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 10/152 (6%) Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R LGP+P +A + + ++ L++Q +++G GNIY EAL+R +SP R Sbjct: 194 RRLGPDPLRADADAEVFVAKARSRRKSIGELLMDQSVISGAGNIYRAEALFRVGISPFRA 253 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVY 256 N ++ L + ++++ ++ + G L D + VY Sbjct: 254 ------GNRVSEERLRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLPPDDPEAGRWYVY 307 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PCL CG + A R F+C CQ Sbjct: 308 HRTGRPCL-RCGTPVAEREMAARRLFWCPTCQ 338 >gi|145642431|ref|ZP_01797986.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145272869|gb|EDK12760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 66 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L +AI GG++L+D++ DG GYF VYG +PC CG I +V R++FY Sbjct: 1 MLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFY 59 Query: 284 CTYCQK 289 C CQK Sbjct: 60 CPKCQK 65 >gi|298524435|ref|ZP_07011844.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|298494229|gb|EFI29523.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 166 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 13 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + I VL DA+ R V ++ G ++ Sbjct: 71 FATAGKLSGAQ------LTCLHEAIASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 117 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 118 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|197251492|ref|YP_002145687.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226741118|sp|B5EZF2|END8_SALA4 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197215195|gb|ACH52592.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 263 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 38/295 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L++ H + G + +I+ K + I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPKTTR--------ILRVRLQTADKTILLYSAS 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 108 D----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQ 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN E LW+ L+ K + L N + L + +I ++ + G Sbjct: 162 AFLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQ 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 216 ADENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|167552854|ref|ZP_02346605.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322568|gb|EDZ10407.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 263 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEVC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|324997971|ref|ZP_08119083.1| endonuclease VIII [Pseudonocardia sp. P1] Length = 271 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 19/244 (7%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + K+L + + VHLG+ G+F +P+ + + L Sbjct: 41 GQVMTGAEAHGKHLFHRYGRDRVVHVHLGLYGTFTESELPAPEPV-----GQLRMRLVGE 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 ++ Y D R +L+ TS + + R LG +P + + + + S Sbjct: 96 SH-------YADLRGPTACELI-TSAEARAVRAR-LGADPLRRDADPDRVWERVSRSRSP 146 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKV 224 L L++Q ++AG+GN+Y E L+R L P R L + + D++ + ++ Sbjct: 147 LATLLMDQAVLAGVGNVYRAELLFRHGLDPQLPGRGLDRATWDAMWPDLVALMRDGVRVG 206 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ID + R G VY + G PCL CG +R A R+ F+C Sbjct: 207 RIDTVRPEHDPRRRGE--PGRKDRHGGEVYVYRRAGLPCLV-CGTEVRHSEHAARNLFWC 263 Query: 285 TYCQ 288 CQ Sbjct: 264 PTCQ 267 >gi|16764098|ref|NP_459713.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993004|ref|ZP_02574099.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262231|ref|ZP_03162305.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|325530041|sp|E1W9M1|END8_SALTS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|325530042|sp|P0CL05|END8_SALTY RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|16419237|gb|AAL19672.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240486|gb|EDY23106.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328917|gb|EDZ15681.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245991|emb|CBG23793.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992466|gb|ACY87351.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157319|emb|CBW16808.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911755|dbj|BAJ35729.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226304|gb|EFX51355.1| Endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129038|gb|ADX16468.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987665|gb|AEF06648.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 263 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F ++ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKLFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|254479820|ref|ZP_05093068.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214039382|gb|EEB80041.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 273 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 74/297 (24%), Positives = 118/297 (39%), Gaps = 35/297 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ I + V+ TV I RF P HFS +G ++IDV R K Sbjct: 1 MPEGPEIRIAADTIANVLVGNTVETI-------RFGLPRLRHFSKQLKGHRVIDVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYN 117 LL + SI H + G + + C+ K P+ N + I L T++ V+Y+ Sbjct: 54 ALLTHFDHGYSIYSHNQLYGVWKV----CSG-HKLPKSNRSMRILLQTETHSA---VLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQ 174 + + T ++P LR LGP+ + + + + + L L+Q Sbjct: 106 A----SDISVWPTEELAEHPFLRKLGPDIMNPALEWREIAARLQDPRFERRELAALYLDQ 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG GN E A L P +K L + L KL + ++ + D G Sbjct: 162 SFLAGNGNYLRSEVTHHAGLHPKQKPCELTRAQ------LGKLARSTLEISRRSYDTRGI 215 Query: 235 SLRDYVHI---DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + + F V+G+ PC S C I+ R ++C CQ Sbjct: 216 TITPRLSKTLEKRGVARGSRRFYVFGRDDLPCYS-CSTPIKYSEINSRRLYHCPQCQ 271 >gi|215410531|ref|ZP_03419339.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 160 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + I VL DA+ R V ++ G ++ Sbjct: 65 FATAGKLSGAQ------LTCLHEAIASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 111 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 112 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|206575846|ref|YP_002239656.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|290510447|ref|ZP_06549817.1| endonuclease VIII [Klebsiella sp. 1_1_55] gi|226741117|sp|B5XZD9|END8_KLEP3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|206564904|gb|ACI06680.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|289777163|gb|EFD85161.1| endonuclease VIII [Klebsiella sp. 1_1_55] Length = 263 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 42/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K +TD F FP + + G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTDAW-------FAFPQLQPYQSLLIGQRVTHIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL G L++ H + G + + + P N V +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVDAG-----EQPASNRVL--RVRLQTARKAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-----AIYLTHQF-HKKNSNLKNALL 172 ++++ +P L +GP+ D + A L+ +F H++ S L LL Sbjct: 107 SD----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGL---LL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN E LW+ LS RK L + I + D Sbjct: 160 DQAFLAGLGNYLRVEILWQVGLSGKRKAAELSDSQLDALAHALLAIPRLSYHTRGQAD-- 217 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D H G++ F+ F V+ + GE C CG +I + + R ++C CQ Sbjct: 218 -----DNKH-HGAL--FR--FKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|168786866|ref|ZP_02811873.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] gi|261224415|ref|ZP_05938696.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK2000] gi|261254594|ref|ZP_05947127.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK966] gi|189373038|gb|EDU91454.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] Length = 263 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + + T L T ++ Sbjct: 54 GLLTHFSNDLTLYSHNQLYGVWRVVDTG--------EESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 106 ASD---IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|307328464|ref|ZP_07607639.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885876|gb|EFN16887.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 31/251 (12%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + K+L ++ + VHLG+ G++ V + L N Sbjct: 41 GQPLHHAEAHGKHLFLDFAATGWVHVHLGLFGTYAFGPAPAPPATDT-----VRLRLANP 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 Y D R L+ K LGP+P + + + + + Sbjct: 96 EG-------YADLRGPTACALITDGEKQAI--HDRLGPDPLRPADDGERAWTRISRSRVS 146 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKV 224 + L++QK+++G+GN+Y E L+R + P R R+L + + D++ + + ++ Sbjct: 147 VAALLMDQKVISGVGNVYRAEVLFRHGIDPYRPGRALTRAEWDAIWADLVALMREGVRNN 206 Query: 225 LIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 ID + +A G R +D G VY + G+PC CG IR A Sbjct: 207 RIDTVRPEHTPEAMGRPPR----VDDHGG----EVYVYRRAGQPC-HVCGGEIRTADLAA 257 Query: 279 RSTFYCTYCQK 289 R+ F+C CQ+ Sbjct: 258 RNLFWCPDCQR 268 >gi|294497645|ref|YP_003561345.1| endonuclease VIII [Bacillus megaterium QM B1551] gi|294347582|gb|ADE67911.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium QM B1551] Length = 272 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 45/303 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE IRR V K + I L + + F FP H+ G +I V + K Sbjct: 1 MPEGPE---IRRAADEVEKAI----ISLPVREIWFAFPSLQHYEEVLTGARIKRVDTKGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LI + +I H + G + + +S P N Q + +++ N KK ++Y+ Sbjct: 54 AMLIRFDNGYTIYSHNQLYGKWYV-RSSYNYPSTNRQ---LRLAIHNE---KKSALLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQK 175 ++++ +P + +GP+ A L +F+ K + LL+Q Sbjct: 107 SD----IEVLRDEEVSAHPFVSRVGPDTLSEEVTADELLDRFYSKPFYRRKWASLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRK----TRSLIQNNGTPKDILYKLIQEIQKV-----LI 226 +AGIGN E L+ A ++P + T ++ L K E + L Sbjct: 163 FIAGIGNYLRSEILFVAGINPAARPVDCTEEQLKKAAEATISLVKQSYETGGITNDVKLA 222 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + + G Y H V+ + GE C + G I ++ A R +YC Sbjct: 223 ETLKKKGQKRSQYRHW------------VFNREGEACRID-GTPILKVQAASRRLYYCPT 269 Query: 287 CQK 289 CQK Sbjct: 270 CQK 272 >gi|134097938|ref|YP_001103599.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133910561|emb|CAM00674.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 33/228 (14%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + VHLG+ G+F T P+ P+ V + + +T+ R P + E Sbjct: 64 VHVHLGLYGTF----TESELPMDEPR-GQVRMRIVGDTHGTDLR----GPTACELLTDAE 114 Query: 130 TSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 LR LGP+P + + + +++ LL+QK++AG GN+Y E Sbjct: 115 VEA------LRDRLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNVYRAEV 168 Query: 189 LWRAKLSPIRKTRSLIQNNG--TPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYV 240 L+R + P R L + D++ + ++ ID + +A G + R Sbjct: 169 LFRHGIPPRTPGRDLGRERWDLVWSDLVELMAAGVRAGRIDTVRPEHEPEATGRAPRQDR 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H VY + G+PCL CG + GR ++C CQ Sbjct: 229 H--------GGEVYVYRRAGQPCLV-CGTEVATADLVGRKLYWCPSCQ 267 >gi|121708175|ref|XP_001272051.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] gi|119400199|gb|EAW10625.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] Length = 369 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 25/226 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T+T + ++ + F A GK+++ ++ Sbjct: 1 MPELAEVSRIVHFLSEYVVGKTLTKVTTTNDDIVYGKAGTSASEFQKAMEGKRVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GMSG + H P P+H + Sbjct: 61 GKYFWMIMSEPPHAVMHFGMSGWLKFDGVDTYYYRSDKHEDEEWP---PKHWKFLLETDG 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEP--ADNSFNAIYLTHQFH 161 T+ + D RR + LV+ + +Y PL+ GP+P N +L + Sbjct: 118 EPKTE---AAFVDVRRLSRVHLVDCPAEDIRKYSPLKNHGPDPILDKNILTEEWLAKKIK 174 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 K +K LL+Q ++GIGN E L+ AK+ P + + +L Sbjct: 175 SKKVPVKVFLLDQANISGIGNWMGDEILYHAKIYPEQYSNTLTDEQ 220 >gi|326382819|ref|ZP_08204509.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] gi|326198409|gb|EGD55593.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] Length = 231 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 21/155 (13%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GNIY E L+RA + P R Sbjct: 89 LGPDPLRDDADPEVAWKAISRSRRPIGSLLMDQKVIAGVGNIYRAEVLFRAGVEPHRPGS 148 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI------DGSIGYFQNAFS- 254 ++ ++ E+ L+ + G R ++H+ +G+ Y + Sbjct: 149 AVTRDE----------FDEMWADLLHLMPIG--VRRGHIHVVRPEDDNGAPAYASDRPRT 196 Query: 255 -VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PC CG I GR+ F+C CQ Sbjct: 197 YVYRRAGDPC-RLCGAPIAWEEMEGRNLFWCPSCQ 230 >gi|332670076|ref|YP_004453084.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Cellulomonas fimi ATCC 484] gi|332339114|gb|AEE45697.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Cellulomonas fimi ATCC 484] Length = 258 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 46/290 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +++RR + + T + R LR+ P + G+ ++ K+LL Sbjct: 1 MPEGDVLRRTAARLDAALVGTPLV--RAELRW--PTAATVDLVGRTVLGTRPYGKHLLTR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + ++ HL M G++ +E T + + V L T ++ G Sbjct: 57 FDDGRTLHTHLRMDGTWRVEPTGSSA--AQGRSTRVRALLATERWTALGLLL-------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAGIGN 182 +D+V T + + LGP+ D+ F+ ++ + + + LL+Q +VAGIG Sbjct: 108 MLDVVPTRDEATL--VGHLGPDVLDDPFDLDEALRRWAARGATPVAEVLLDQTVVAGIGT 165 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 I++ E+L+ ++ P + + + G + +L+Q Sbjct: 166 IFMAESLFAERVWPWTPADA-VPDPGRVLRVARRLMQR---------------------- 202 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMI----RRIVQAGRSTFYCTYCQ 288 S+ + A V+G+ PC+ CG I R R F+C CQ Sbjct: 203 --SVLSGRPAERVHGRNRRPCV-RCGTPITVGSARPAPMSRPVFWCPRCQ 249 >gi|293189765|ref|ZP_06608481.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] gi|292821355|gb|EFF80298.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] Length = 345 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 27/162 (16%) Query: 142 LGPEPAD----NSFNAIYLTHQF-HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 LGP+P D + A+ Q H K + +++Q I+AG+GNIY +AL+ A +SP Sbjct: 197 LGPDPLDAGARSDAEAMERFAQVAHSKKRAIGEIVMDQSIIAGVGNIYRADALFLAGISP 256 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-DYVH--------IDGSIG 247 RK +I K ++E+ ++ D ++ G ++ R D + I+G Sbjct: 257 HRKG----------ANISIKRLRELWVLICDLMNRGLAAGRLDTMDPEEAPNPPIEGD-- 304 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY +T PCL CG IR + R F+C CQ+ Sbjct: 305 EEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|307314822|ref|ZP_07594416.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|306905720|gb|EFN36248.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|315059956|gb|ADT74283.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323379483|gb|ADX51751.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Escherichia coli KO11] Length = 263 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTD-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ + + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLNPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|154509232|ref|ZP_02044874.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] gi|153798866|gb|EDN81286.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] Length = 345 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 27/162 (16%) Query: 142 LGPEPAD----NSFNAIYLTHQF-HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 LGP+P D + A+ Q H K + +++Q I+AG+GNIY +AL+ A +SP Sbjct: 197 LGPDPLDAGARSDAEAMERFAQVAHSKKRAIGEIVMDQSIIAGVGNIYRADALFLAGISP 256 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-DYVH--------IDGSIG 247 RK +I K ++E+ ++ D ++ G ++ R D + I+G Sbjct: 257 HRKG----------ANISIKRLRELWVLICDLMNRGLAAGRLDTMDPEEAPNPPIEGD-- 304 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY +T PCL CG IR + R F+C CQ+ Sbjct: 305 EEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCPSCQR 345 >gi|62179304|ref|YP_215721.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582543|ref|YP_002636341.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309746|sp|Q57RM1|END8_SALCH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783123|sp|C0PWD7|END8_SALPC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|62126937|gb|AAX64640.1| endonuclease VIII removing oxidized pyrimidines may also remove oxidized purines in absence of MutY and Fpg [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467070|gb|ACN44900.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713771|gb|EFZ05342.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 263 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ + A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLNARLTPEEVKARLLSPRF--RNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L ++ +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHVLLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|330922902|ref|XP_003300019.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] gi|311326034|gb|EFQ91877.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] Length = 424 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSG--SFIIEHTS---CAKPIKN-- 93 F A GKK++D ++ KY + L+ + HLGM+G + E T KP K Sbjct: 45 FQKAITGKKVVDARQQGKYFWLVLDSQPHPLFHLGMAGWVEYKNEETGYYRSTKPEKTEW 104 Query: 94 -PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA-DN 149 P+ + + + + + D RR + LV+ + + + PL+ GP+P D Sbjct: 105 PPKFWKFVLQMKEEPENE---MAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDK 161 Query: 150 SFNAI-YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 S + +L + K +K LL+Q ++GIGN E +++AKL P Sbjct: 162 SILTVDWLGKKLRSKKVPVKALLLDQANISGIGNWVGDEVMYQAKLHP 209 >gi|315656363|ref|ZP_07909252.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492922|gb|EFU82524.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 342 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + ALL+Q ++AG+GNIY E L+ A+L+P R Sbjct: 192 LGPDPLRPDCDCGEFVKRCATRQKGIGEALLDQSVIAGVGNIYRAEVLYAARLNPFTPAR 251 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDY---VHIDGSIGYFQNA--- 252 + L ++ +++ L +++G +S DY V + + G A Sbjct: 252 EVSSRK------LRRIWDWLEEYLPLGVESGRITTASPDDYAVFVERELAAGREPQAIDS 305 Query: 253 -FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PCL C ++ + GR ++C CQ+ Sbjct: 306 RYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|253687624|ref|YP_003016814.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645859|sp|C6DCC8|END8_PECCP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|251754202|gb|ACT12278.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 263 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 65/294 (22%), Positives = 121/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L+ + T+T + F FP + A G+++ ++ R K Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVW-------FAFPELKPYEAELVGQQVRQIATRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + H + G + + + + K L T+ ++ Sbjct: 54 ALLTYFSNDRVLYSHNQLYGVWRVVNAGESPETKR--------DLRVRLETQNRAILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF--NAIY-LTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D S +Y + LL+Q Sbjct: 106 ASD---IEMLTPEALTTHPFLQRIGPDVLDLSLTPEQVYERLLLPRFRRRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+A+L+P + Q N L + + EI ++ + + G+ Sbjct: 163 FLAGLGNYLRVEILWQAQLAP---QHTAAQLNEEQLQTLSQALLEIPRL---SYNTRGTV 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 --DENHHHGAI----FSFKVFHRDGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|293409085|ref|ZP_06652661.1| endonuclease VIII [Escherichia coli B354] gi|291469553|gb|EFF12037.1| endonuclease VIII [Escherichia coli B354] Length = 263 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K + D+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLIDVW-------FAFPQLEPYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + +I ++ + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRL--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|164604791|gb|ABY61957.1| putative formamidopyrimidine-DNA-glycosylase [Haemophilus influenzae] Length = 65 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L + I GG++L+D++ DG GYF VYG +PC CG I +V R++FYC Sbjct: 1 LSNGIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYC 59 Query: 285 TYCQK 289 CQK Sbjct: 60 PKCQK 64 >gi|118618996|ref|YP_907328.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571106|gb|ABL05857.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 268 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 25/252 (9%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 + A G+ + S K+L G + VHLG+ G+F S + + +P V + Sbjct: 36 AGAVDGRVLRAASAWGKHLFHHYAGGPVVHVHLGLYGAFTEWVRSAGELLPDPV-GQVRM 94 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + +Y P +D + + L LGP+P + + + Sbjct: 95 RMVG----AEYGTDLRGPTVCEVIDDAQVADV-----LARLGPDPLRKDADPSWAWARIA 145 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDI--LYKL 217 K + L++QK++AG+GN+Y E L+R ++ P R + + + + D+ L K+ Sbjct: 146 KSRRPIGALLMDQKVMAGVGNVYRSELLFRHRIDPYRSGQRITEAEFSAAWTDLVALMKV 205 Query: 218 IQEIQKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 K+++ +R ++ H S + VY + G+PC CG + V Sbjct: 206 GSRGGKIVV---------VRPEHDHGAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVL 255 Query: 277 AGRSTFYCTYCQ 288 GR+ F+ CQ Sbjct: 256 EGRNVFWRPSCQ 267 >gi|318061010|ref|ZP_07979731.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actG] gi|318078758|ref|ZP_07986090.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actF] Length = 263 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 47/297 (15%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE V R L + + +TV D+ P +A G+++ DV+ R K Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADL---------RVPRFATADLTGREVRDVTPRGK 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L G L++ HL M G++ + + + + P H I T YR+ Sbjct: 52 HLLTRLSGGLTLHTHLRMDGAWRV-YEAGERWRGGPGHQIRAILGTEARTAVGYRLP--- 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIV 177 ++L+ T+ + + + LGP+ ++A + L ALL+Q+ + Sbjct: 108 -----VVELLRTADEDRA--VGHLGPDLLGPDWDAGAALARLLAAPERPLGEALLDQRNL 160 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KDILYKLIQEIQKVLIDAIDAGGSSL 236 AGIGN+Y E + +++P TP D+ + + + Sbjct: 161 AGIGNVYKSELCFLLRVTPW-----------TPVGDVPRPARATALAARLLDANR--DTF 207 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 R + G VYG+ PCL CG IR Q R T++C CQ+ Sbjct: 208 RRV-----TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQE 258 >gi|261341306|ref|ZP_05969164.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] gi|288316610|gb|EFC55548.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] Length = 263 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 65/302 (21%), Positives = 117/302 (38%), Gaps = 52/302 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +T + F FP + + G+ + + R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTRVW-------FAFPQLKKYESMLVGQTVTHIDTRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL NL++ H + G + + + + P+ V + K ++Y+ Sbjct: 54 ALLTHFSHNLTLYSHNQLYGVWRVVNAD-----EQPETTRVLRVRLQTAD--KAVLLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLN 173 +D++ +P L+ +GP+ D + A L+ +F +N L+ Sbjct: 107 SD----IDMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPKF--RNRQFSGLFLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV------LID 227 Q +AG+GN E LW L+ K L + D L + EI ++ ++D Sbjct: 161 QAFLAGLGNYLRVEILWDVGLAAQHKASQL---SDAQLDALSHALLEIPRLSYNTRGMVD 217 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ R F V+ + G+ C CG +I + + R ++C C Sbjct: 218 DKKHHGALFR---------------FRVFHRAGKKC-ERCGGIIEKTTLSSRPFYWCPGC 261 Query: 288 QK 289 Q+ Sbjct: 262 QR 263 >gi|152967464|ref|YP_001363248.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151361981|gb|ABS04984.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 265 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 24/243 (9%) Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + ++ K+LL EG ++ VHLG+ G + + P V + L Sbjct: 42 RALVATEAHGKHLLARFEGGRTLHVHLGLYGRWTFGEGAPEAP-----RGQVRLRLEGER 96 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 R P +D + + LG +P + + + + Sbjct: 97 AWADLR----GPTACEVLDPAGVAALHAR-----LGEDPLRPDADPGAAHARISRSRVGV 147 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 L+ Q++VAG+G + E L+R + P R R L + D ++ ++ +++ Sbjct: 148 GALLMQQEVVAGVGTTFRAEVLFRNGVDPFRPGRELARAE---WDAVWA---DLVRLMAA 201 Query: 228 AIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + AG ++ ++ GS ++F VYG+ G+PC C + + AGR +C Sbjct: 202 GVRAGRIVTTRPEHRSRRGSPSR-ADSFYVYGRAGQPC-RVCSTPVEATLVAGRHLMWCP 259 Query: 286 YCQ 288 CQ Sbjct: 260 TCQ 262 >gi|295703014|ref|YP_003596089.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] gi|294800673|gb|ADF37739.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] Length = 272 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 45/303 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE IRR V K + I L + F FP H+ G +I V + K Sbjct: 1 MPEGPE---IRRAADEVEKAI----ISLPVSEIWFAFPSLQHYEEVLTGARIKRVDTKGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LI + +I H + G + + +S P N Q + +++ N KK ++Y+ Sbjct: 54 AMLIRFDNGYTIYSHNQLYGKWYV-RSSYNYPSTNRQ---LRLAIHNE---KKSALLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQK 175 ++++ +P + +GP+ A L +F+ K + LL+Q Sbjct: 107 SD----IEVLRDEEVSAHPFVSRVGPDILSEEVTADELLDRFYSKPFYRRKWASLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRK----TRSLIQNNGTPKDILYKLIQEIQKV-----LI 226 +AGIGN E L+ A ++P + T ++ L K E + L Sbjct: 163 FIAGIGNYLRSEILFVAGINPASRPVDCTEEQLKKAAEATISLVKQSYETGGITNDVKLA 222 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + + G +Y H V+ + GE C + G I ++ A R +YC Sbjct: 223 ETLKKKGQKRSEYRHW------------VFNREGEACRID-GTPILKVQAASRRLYYCPT 269 Query: 287 CQK 289 CQK Sbjct: 270 CQK 272 >gi|294629356|ref|ZP_06707916.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] gi|292832689|gb|EFF91038.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] Length = 269 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/249 (20%), Positives = 92/249 (36%), Gaps = 27/249 (10%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G ++ K+L + + +HLG+ G P V + L + Sbjct: 41 GGELTRTEAHGKHLFLRFREADWVHIHLGLFGKVTFGDAPAPPPTDT-----VRLRLADT 95 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T R P + E + LGP+P + + + + Sbjct: 96 TAYVDLR----GPTTCALITGAEKQAIHDR-----LGPDPLRPDADPATAYARIRRSRTT 146 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + L++QK++AG+GN+Y E L+R + P R R + TP + + ++ ++ Sbjct: 147 IAALLMDQKVIAGVGNVYRAEVLFRHGIDPYRPGRDI-----TPAE-WQAMWADLVALMR 200 Query: 227 DAIDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 D + A H ++G VY +T PC CG +R A R+ Sbjct: 201 DGVRANRIDTVRPEHTPEAMGRPPRVDDHGGEVYVYRRTALPC-HICGTEVRTADLAARN 259 Query: 281 TFYCTYCQK 289 F+C CQ+ Sbjct: 260 LFWCPTCQR 268 >gi|269795617|ref|YP_003315072.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097802|gb|ACZ22238.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 260 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 115/299 (38%), Gaps = 55/299 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T L NL A G ++ K++ Sbjct: 1 MPEGDTVFLTARRLDEALSGTVLTWAELRWPNLD-------PTALAGTTVLRSRAYGKHV 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ ++ HL M G++ + T A + + V L N T T D Sbjct: 54 LTTVDSGWTLHTHLRMDGTWRVHRTDPAARLA--RRPTVRAVLANETWT-----CVGD-- 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPE-------PADNSFNAIYLTHQFHKKNSNLKNALLN 173 R G MDLV T ++ L LGP+ + + A+ T+Q + + LL+ Sbjct: 105 RLGMMDLVRTRDEHTL--LDHLGPDILAPDFGSSPDGLAAVLRTYQAQGARP-VGDCLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+G ++ E L+ ++ P + L L+ I++ L+ + Sbjct: 162 QTLMAGVGTLFAAEGLFDRQVWPWTPAAEV---------DLVPLLGSIRRNLLRGV---- 208 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR----IVQAGRSTFYCTYCQ 288 +DG + V+ ++G PC CG I R + R FYC CQ Sbjct: 209 -----ARPVDGRV------VHVHSRSGSPC-HRCGTTIVRGLAGVAPMERPMFYCPVCQ 255 >gi|328882456|emb|CCA55695.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 269 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 31/240 (12%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + G + +HLG+ G P V + L N ++ Y V Sbjct: 51 GKHLFLGFTGMGWVHIHLGLFGKVGFGDAPAPPPTDT-----VRLRLAN---SRSY-VDL 101 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 P + E + LGP+P + + + + L++QK+ Sbjct: 102 RGPTTCALITDAEKRAIHDR-----LGPDPLREDDDRARAWRRISASRTTIAALLMDQKV 156 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLIDAI----- 229 +AG+GN+Y E L+R + P R R L + + +D++ + + ++ ID + Sbjct: 157 IAGVGNVYRAEVLFRHGIDPYRAGRDLTPEEWDALWEDLVLLMREGVRLNRIDTVRPEHT 216 Query: 230 -DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +A G R +D G VY + +PC CG IR A R+ F+C CQ Sbjct: 217 PEAMGRPPR----VDDHGG----EVYVYRRANQPC-HVCGSEIRTADLAARNLFWCPGCQ 267 >gi|319947983|ref|ZP_08022160.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] gi|319438329|gb|EFV93272.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] Length = 278 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 29/242 (11%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSF----IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L EG L++ VHLG+ G F + E P+ + I+ + Sbjct: 50 GKHLFHHYEGGLAVHVHLGLYGFFDTHLVPEGQDPPAPVGQVRMRVGAIA----DGAPAH 105 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V P R + E LGP+P D + + + L+ Sbjct: 106 WVDLRGPTRCEVIAEAEVGAVRD-----RLGPDPLDPDAEPERAWARIARSARPIGALLM 160 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSL--IQNNGTPKDILYKLIQEIQKVLIDAI- 229 +QK++AG+GN+Y E L+R + P R + L Q + D++ + ++ I I Sbjct: 161 DQKVLAGVGNVYRAEVLFRHGIDPFRPGKDLDRAQFDAVWDDLVALMEIGVRTGAIHTIR 220 Query: 230 ---DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 D G R G + VY + G C CG +R+ R+ ++C Sbjct: 221 PEHDHGDVPRR---------GADRPRNYVYQRDGWEC-RVCGDQVRQQAMEARTLYWCPT 270 Query: 287 CQ 288 CQ Sbjct: 271 CQ 272 >gi|262183005|ref|ZP_06042426.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 271 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 33/227 (14%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 I +HLG+ GS E ++ + + + N T R P+ F L+ Sbjct: 67 IYIHLGLIGSLRFEPSADV-------WGQIRLRIDNGTTAANLR----GPQ---FCTLI- 111 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 T +YQ + +G +P + L + H ++ L++Q + AG+GNIY EAL Sbjct: 112 TEEEYQAK-VAKVGQDPLRKDADPDTLWDRVHASRRSIGAMLMDQGLFAGVGNIYRAEAL 170 Query: 190 WRAKLSPIRKTRSL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVH 241 +R +LSP L + + D++ + ++ ID + +A G R H Sbjct: 171 FRQELSPFIPGNQLDRAEFDAIWSDLVDLMDYGVEHGRIDTVRPAHTPEAMGREPRKDDH 230 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y VY + G PC C + IR V GR+ F+C CQ Sbjct: 231 --GGEVY------VYRRAGLPCHVCCTE-IREQVMQGRNLFWCPTCQ 268 >gi|261194587|ref|XP_002623698.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239588236|gb|EEQ70879.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239613483|gb|EEQ90470.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ER-3] gi|327355061|gb|EGE83918.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ATCC 18188] Length = 378 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 15/222 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRKYLVGNTITKVHVQDDPIVFGKAGTTAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSG--SFII-----EHTSCAKPIKNPQHNHVTISLTNNTNT 109 KY I + ++H GM+G F I T+ A ++ + + Sbjct: 61 GKYFWITMSSPPHPVMHFGMTGWLKFTIMNTHYRRTTAANNEESQWPPKFWKFILQIDDA 120 Query: 110 KKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA-DNSFNAI-YLTHQFHKKNS 165 K + DPRR G + LV ++ PL+ GP+P D + +L+ + K Sbjct: 121 SKSETAFVDPRRLGRVRLVNCPGADIRKHSPLKENGPDPILDKHIMTLDWLSRKLASKKV 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +K LL+Q ++GIGN E L+ AK+ P + + ++ Q Sbjct: 181 PIKALLLDQSNISGIGNWMGDEILYHAKIHPEQYSNTIEQGQ 222 >gi|119500164|ref|XP_001266839.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] gi|119415004|gb|EAW24942.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] Length = 367 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFIDQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKEWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNSF-NAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P AD +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPAEEIRKHSPLKDNGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWG-KGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|302522265|ref|ZP_07274607.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302431160|gb|EFL02976.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 263 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 47/297 (15%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE V R L + + +TV D+ P +A G+++ DV+ R K Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADL---------RVPRFATADLTGREVRDVTPRGK 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L G L++ HL M G++ + + + + P H I T YR+ Sbjct: 52 HLLTRLSGGLTLHTHLRMDGAWRV-YEAGERWRGGPGHQIRVILGTEARTAVGYRLP--- 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIV 177 ++L+ T+ + + + LGP+ ++A + L ALL+Q+ + Sbjct: 108 -----VVELLRTADEDRA--VGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNL 160 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KDILYKLIQEIQKVLIDAIDAGGSSL 236 AGIGN+Y E + +++P TP D+ + + + Sbjct: 161 AGIGNVYKSELCFLLRVTPW-----------TPVGDVPRPARATALAARLLDANR--DTF 207 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 R + G VYG+ PCL CG IR Q R T++C CQ+ Sbjct: 208 RRV-----TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQE 258 >gi|295096574|emb|CBK85664.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease VIII [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 263 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 40/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ +L +K +T + F FP F + G+ + + R K Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTHVW-------FAFPQLKPFESQLVGQTVTHIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL NL++ H + G + + + PQ V + K ++Y+ Sbjct: 54 ALLTHFSHNLTLYSHNQLYGVWRVVEAD-----EQPQTTRVLRVRLQTAD--KAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLN 173 ++++ +P L+ +GP+ D + A L+ F +N LL+ Sbjct: 107 SD----IEMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPTF--RNRQFSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW L+P K L ++ + L+D I Sbjct: 161 QAFLAGLGNYLRVEILWEVGLAPQHKASQLSDEQ----------LEALSHALLD-IPRLS 209 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + R V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 210 YNTRGVVDENKHHGALFR-FKVFHRAGKKC-ERCGGVIEKATISSRPFYWCPGCQ 262 >gi|269139935|ref|YP_003296636.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|267985596|gb|ACY85425.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|304559770|gb|ADM42434.1| Endonuclease VIII [Edwardsiella tarda FL6-60] Length = 280 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 64/295 (21%), Positives = 106/295 (35%), Gaps = 38/295 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + T+T + +L ++A G +I + R K L Sbjct: 1 MPEGPEIRRAADGLRAAVGGGTLTRVWFGAPSL-----QRYAAGLVGCQITAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + P SL T + ++ Sbjct: 56 LIHFSNGMSMYSHNQLYGVWRVAAAGETPPTSR--------SLRVRLETAERAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + L LL+Q+ + Sbjct: 108 D---IQLAPRAQILRHPFLLRIGPDVLDPALTEAQVRERLCSPAFCRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GS 234 AG+GN E LW+A +SP R+ L T + + +D G G+ Sbjct: 165 AGLGNYLRVEILWQAGVSPQRRATELSPAQLTSLCHALLALPRLSYATRGQVDEGRHHGA 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R F V+ + GE C CG + R A R + C CQ+ Sbjct: 225 LFR---------------FRVFHRAGEAC-ERCGTTLVRAQAASRPFYGCPRCQE 263 >gi|333024066|ref|ZP_08452130.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] gi|332743918|gb|EGJ74359.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] Length = 263 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 71/295 (24%), Positives = 115/295 (38%), Gaps = 43/295 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTAADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + + + P H I T YR+ Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRV-YEAGERWRGGPGHQIRAILGTEARTAVGYRLP----- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++A + L ALL+Q+ +AG Sbjct: 108 ---VVELLRTADEDRA--VGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KDILYKLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y E + +++P TP D+ + + RD Sbjct: 163 IGNVYKSELCFLLRVTPW-----------TPVGDVPRPARATALAARLLDAN------RD 205 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 + G VYG+ PCL CG IR Q R T++C CQ+ Sbjct: 206 TFRRV-TTGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQE 258 >gi|255324058|ref|ZP_05365183.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] gi|255298915|gb|EET78207.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 24/172 (13%) Query: 127 LVETSLKYQYPPLRTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 L E + Q L +G +P AD A++ T HK ++ + +++Q + AG+GNIY Sbjct: 111 LTEEEYRAQ---LAKVGQDPLRADADVEALWDT--VHKSRRSIGSLMMDQHLYAGVGNIY 165 Query: 185 VCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAI------DAGGSSL 236 E L+R LSP R + + + T D++ + ++ ID + +A G Sbjct: 166 RAETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSPEAMGREP 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R H VY + G PC CG + V GR+ F+C CQ Sbjct: 226 RKDDH--------GGEVYVYRRAGLPCYI-CGTPVAEKVMEGRNLFWCPTCQ 268 >gi|15840367|ref|NP_335404.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|148822152|ref|YP_001286906.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253800030|ref|YP_003033031.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|254231252|ref|ZP_04924579.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|308231675|ref|ZP_07413410.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308370120|ref|ZP_07420350.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308372976|ref|ZP_07430625.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308379911|ref|ZP_07488077.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|13880533|gb|AAK45218.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|124600311|gb|EAY59321.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|148720679|gb|ABR05304.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253321533|gb|ACT26136.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|308216422|gb|EFO75821.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308325248|gb|EFP14099.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308339239|gb|EFP28090.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308363225|gb|EFP52076.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] Length = 166 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 13 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 71 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 117 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 118 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|161615045|ref|YP_001589010.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037134|sp|A9MTR2|END8_SALPB RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|161364409|gb|ABX68177.1| hypothetical protein SPAB_02805 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 263 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F N LL+Q Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--CNRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F+ F V+ + GE C CG +I + + R ++C +CQK Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|119194501|ref|XP_001247854.1| hypothetical protein CIMG_01625 [Coccidioides immitis RS] Length = 416 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 26/254 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC----AKPIKN-----PQHNHVTISLTNNT 107 KY + + ++H GM+G I+ + AK ++ P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEDDGPWPPKFWKFQLVMDDD- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 KK + D RR G + LV+ + + PL+ GP+P + +L KK Sbjct: 120 --KKTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVIDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + +L + + +L I Sbjct: 178 KVPIKALLLDQSIISGLGNWMADEVLYHSQIHPEQTSNTLDDSQ------IRELNSAIHY 231 Query: 224 VLIDAIDAGGSSLR 237 V ++D G S R Sbjct: 232 VCATSVDLLGDSAR 245 >gi|309811321|ref|ZP_07705108.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434628|gb|EFP58473.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 304 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 40/278 (14%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSG--SFIIEHT 85 L R +LR P + G++ + V K++L LEG ++I H M G S + + Sbjct: 23 LTRTDLRT--PRLATVDLSGRECLPVVTHGKHMLHRLEGGVTIHSHFKMEGRWSLLPAPS 80 Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR------RFGFMDLVETSLKYQYPPL 139 + V ++T +T R + PR + G +D++ET+ + + Sbjct: 81 TLQGRAAAGAEADVRRAVTAHTT----RALLYTPRTLAVGSKLGVLDVLETARECDV--V 134 Query: 140 RTLGPE----PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 LGP+ D L + + + ALL+Q++VAG+G ++ E LW ++ Sbjct: 135 GHLGPDLLADDWDGGGRGRALDNLRAQPERPVGEALLDQRLVAGLGTFWISEMLWVHRIL 194 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P Q P +L ++ + +++++ + G S G Q+ + V Sbjct: 195 P------WTQLAAMPDGVLEAVLDDARRLMLVSGRTGVQS------STGDARAGQDRY-V 241 Query: 256 YGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 + ++G CL C I R+ AG R+ F C CQ Sbjct: 242 HARSGMACL-RCNDTI-RVAMAGDPGRERTLFSCPTCQ 277 >gi|148274094|ref|YP_001223655.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832024|emb|CAN02997.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 269 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 39/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V ++ L + V D L R R A G++I K+L Sbjct: 1 MPEGDSVFVLAARLRAQVGGALVADGEL-RSGARA------GARLGGRRITGFDTHGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ ++ HL M GS+ + T K + + V + L + + + Sbjct: 54 LMRLDDATTLHTHLRMQGSWTV--TGAGKRVPQRIQHQVRVRLRLDDGRTLWGI------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 +DL+ T + + + LGP+P + ++ A+ ++ + + ++ ALL+Q+ +AG Sbjct: 106 DLPVVDLIPT--RDERAAIGHLGPDPLRDDWDPALAVSRLAARPDDAIRAALLDQRPMAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++V E + + P + R + + D+ + ++ V G R Sbjct: 164 LGNLWVNEVGFLRGVHPATRVRDV--DLPPLVDLAARSLRHSATVPAAYQITTGDPRRGR 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI------VQAGRSTFYCTYCQ 288 H V G+ G PCL CG + + + GR ++C CQ Sbjct: 222 THW------------VVGRAGRPCL-RCGTTVIGVDDPGSTSERGRRAWWCPRCQ 263 >gi|254820987|ref|ZP_05225988.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium intracellulare ATCC 13950] Length = 239 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + +H LR + G + R K+ Sbjct: 1 MPELPDVEGFRRQLAATLPRRRIRHVQVHDPGILRNTTGQALARRLTGHRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ +G ++++H GM+G A +P + + +SL + Y D Sbjct: 61 LVLPTDGP-ALLIHSGMTGRPYYAPDGAAH---DP-YERLVVSLDGGE------LRYADL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPAD------NSFNAIYLTHQFHKKNSNLKNALLN 173 R+ + L + + + GP+ D F A+ + ++ LK L++ Sbjct: 110 RKLRGVWLADDADDIGH----ITGPQGPDALGLGLREFRAVLASRS--ARSRQLKPTLMD 163 Query: 174 QKIVAGIGNIYVCEALWRAKLSP 196 Q ++AG+GN+ V E WRAK P Sbjct: 164 QSVLAGLGNLLVDEICWRAKTRP 186 >gi|320096121|ref|ZP_08027719.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976942|gb|EFW08687.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] Length = 345 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 18/136 (13%) Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 H K + +++Q I+AG+GNIY +AL+ A +SP RK ++ K ++ Sbjct: 221 HSKRRAIGEIVMDQSIIAGVGNIYRADALFLAGISPHRKG----------ANVSLKRLRG 270 Query: 221 IQKVLIDAIDAGGSSLR-DYVHIDGS----IGYFQNA--FSVYGKTGEPCLSNCGQMIRR 273 + ++ D ++ G ++ R D + D + I + A + VY +TG PCL CG IR Sbjct: 271 LWVLICDLMNRGLAAGRLDTMDPDEAPDPPIEGDEEASRWYVYHRTGRPCL-RCGTPIRE 329 Query: 274 IVQAGRSTFYCTYCQK 289 + R F+C CQK Sbjct: 330 ALMQNRRLFWCPGCQK 345 >gi|298345303|ref|YP_003717990.1| putative DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] gi|298235364|gb|ADI66496.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] Length = 342 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + AL++Q ++AG+GNIY E L+ A+L+P R Sbjct: 192 LGPDPLRPDCDFSEFVKRCATRQKGIGEALMDQSVIAGVGNIYRAEVLYAARLNPFTPAR 251 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDY---VHIDGSIGYFQNA--- 252 + L ++ +++ L +++G +S DY V + + G A Sbjct: 252 EVTSRK------LRRIWDWLKEYLPLGVESGRITTASPDDYAVFVERELAAGREPQAIDS 305 Query: 253 -FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PCL C ++ + GR ++C CQ+ Sbjct: 306 RYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|167967805|ref|ZP_02550082.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215426213|ref|ZP_03424132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215429803|ref|ZP_03427722.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215445090|ref|ZP_03431842.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218752609|ref|ZP_03531405.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|254363871|ref|ZP_04979917.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254549924|ref|ZP_05140371.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289555276|ref|ZP_06444486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308370542|ref|ZP_07421943.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308371805|ref|ZP_07426308.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308374140|ref|ZP_07435023.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308375296|ref|ZP_07443456.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308376555|ref|ZP_07439277.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308377554|ref|ZP_07479648.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308378766|ref|ZP_07483841.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308397511|ref|ZP_07492578.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|134149385|gb|EBA41430.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|289439908|gb|EFD22401.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308331620|gb|EFP20471.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308335433|gb|EFP24284.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308342884|gb|EFP31735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308346800|gb|EFP35651.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308350716|gb|EFP39567.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308355377|gb|EFP44228.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308359316|gb|EFP48167.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308366882|gb|EFP55733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|328459772|gb|AEB05195.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 160 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 65 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 111 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 112 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|29347769|ref|NP_811272.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29339670|gb|AAO77466.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 273 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 48/305 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----LHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M ELPE + + + + +K+ +T++ H+ F P +S G++I Sbjct: 1 MKELPENQTLSKQINETLKDRVITEVFNATKFHKNTFYFGDPLTYSELLIGRRINSSMSF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN-------- 108 Y+ I L+ I G + +++ + + K P + + ++L NNT Sbjct: 61 GMYVDIILDKETKISFGDGTN----LKYGTISN--KMPNNYQLLLALDNNTYLTFTVGMF 114 Query: 109 --TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKN 164 Y IYND Y L L P D FN Y K Sbjct: 115 GVIAAYTGIYNDI--------------YYKKNLDNLSPLSDD--FNEQYFEKLCVGVKPK 158 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S++K L ++ + G+GN + + L+ AK++P R+ SL + + L+Q I+ Sbjct: 159 SSVKVLLATEQRIPGLGNGVLQDILFNAKINPKREINSLTDIDKSA------LLQSIKMT 212 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L + I GG + I G+ G ++ S +PC CG I + +G +YC Sbjct: 213 LKNMILQGGRDTE--MDIFGNHGNYKTILSK-NTLSKPC-PQCGNPIIKETSSGGVVYYC 268 Query: 285 TYCQK 289 YCQK Sbjct: 269 PYCQK 273 >gi|333010176|gb|EGK29611.1| endonuclease VIII [Shigella flexneri K-272] gi|333021133|gb|EGK40390.1| endonuclease VIII [Shigella flexneri K-227] Length = 263 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + + T + PQ V + + T K ++Y+ Sbjct: 54 ALLTHFPNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRV-LRVKLQTADKTI-LLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 107 SD----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N D L + EI + + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSCPFYWCPGCQ 262 >gi|15608084|ref|NP_215459.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|31792133|ref|NP_854626.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121636869|ref|YP_977092.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660723|ref|YP_001282246.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224989340|ref|YP_002644027.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|260185844|ref|ZP_05763318.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260199964|ref|ZP_05767455.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260204150|ref|ZP_05771641.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289442359|ref|ZP_06432103.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289446514|ref|ZP_06436258.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289573573|ref|ZP_06453800.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289749468|ref|ZP_06508846.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289753000|ref|ZP_06512378.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289757029|ref|ZP_06516407.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|289761078|ref|ZP_06520456.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|294996428|ref|ZP_06802119.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] gi|297633465|ref|ZP_06951245.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297730450|ref|ZP_06959568.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313657778|ref|ZP_07814658.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|1524218|emb|CAB01977.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|31617721|emb|CAD93830.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121492516|emb|CAL70984.1| Possible formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504875|gb|ABQ72684.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224772453|dbj|BAH25259.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415278|gb|EFD12518.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289419472|gb|EFD16673.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289538004|gb|EFD42582.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289690055|gb|EFD57484.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289693587|gb|EFD61016.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289708584|gb|EFD72600.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|289712593|gb|EFD76605.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|323720655|gb|EGB29733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904835|gb|EGE51768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 158 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 5 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 62 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 63 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 109 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 110 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|311740281|ref|ZP_07714112.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304664|gb|EFQ80736.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 20/170 (11%) Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 L E + Q L +G +P + L + HK ++ + +++Q + AG+GNIY Sbjct: 111 LTEEEYRAQ---LAKVGQDPLRTDADVEALWAKVHKSRRSIGSLMMDQHLYAGVGNIYRA 167 Query: 187 EALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRD 238 E L+R LSP R + + + T D++ + ++ ID + +A G R Sbjct: 168 ETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSPEAMGREPRK 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H VY + G PC CG + V GR+ F+C CQ Sbjct: 228 DDH--------GGEVYVYRRAGLPCYI-CGTPVAEKVMEGRNLFWCPTCQ 268 >gi|325676024|ref|ZP_08155707.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553262|gb|EGD22941.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 265 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 95/253 (37%), Gaps = 31/253 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K+L E L + VHLG+ G F P+ + Sbjct: 36 AALIDGRVLVRSDAWGKHLWHHYENGLVVHVHLGLYGKFTESPLPLEPPVGQVRMRMAGT 95 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + ++P+ + +E L GP+P + + Sbjct: 96 EFGTDLRGPTACEVLHEPQ----VAAIEARL----------GPDPLRADADPDRAWARIS 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K + + L++Q ++AG+GN+Y E L+R + P R K++ + Sbjct: 142 KSQTPIGALLMDQAVLAGVGNVYRAEILFRHGIHPERPG----------KNVSRAEFDAM 191 Query: 222 QKVLIDAIDAGGSSLRDYV------HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L+D ++ G + +V H D S + Y + G C CG I +V Sbjct: 192 WADLVDLMNVGVRRGKMHVVRPEDDHGDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHVV 250 Query: 276 QAGRSTFYCTYCQ 288 GR+ F+C CQ Sbjct: 251 MKGRNLFWCPGCQ 263 >gi|327393146|dbj|BAK10568.1| endonuclease VIII Nei [Pantoea ananatis AJ13355] Length = 262 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 53/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + L M + + D+ F FP + G+K+ + R K Sbjct: 1 MPEGPEIRRVADQLEMAIVGQPLADVW-------FAFPALKTYEPTLVGEKVESIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYN 117 LL L++ H + G + I P P+ + + L ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRI-----VSPDVQPETKRQLRVRLATADQAI---LLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALL 172 ++L+ +P L +GP+ ++ L+ +F ++ LL Sbjct: 106 ASD----IELLNAETLASHPFLNRIGPDVLSHALTPEEVKQRLLSARFRRRQ--FSGLLL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DA 231 +Q +AG+GN E LW A+L P +SL ++ +DA DA Sbjct: 160 DQAFLAGLGNYLRVEILWLAQLLPHHNAQSLSESQ------------------LDAFSDA 201 Query: 232 GGSSLRDYVHIDGSIGYFQNA----FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 S R + G++ + + F V+ + G+ C CG +I + V + R ++C C Sbjct: 202 LLSVPRHAYRMRGTMKKYHSEAAFRFEVFHRQGKTC-RRCGTVIEKGVLSSRPFYWCPGC 260 Query: 288 Q 288 Q Sbjct: 261 Q 261 >gi|159125439|gb|EDP50556.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus A1163] Length = 367 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNSF-NAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P AD +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + K P L N G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWGKGKKNKPPVLPN-GEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|302551419|ref|ZP_07303761.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302469037|gb|EFL32130.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 273 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 17/156 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + + L++QK++AG+GN+Y E L+R ++ P R R Sbjct: 126 LGPDPLRDDADPDIAYRRIARSRTTIAALLMDQKVIAGVGNVYRAEVLFRHRIDPYRAGR 185 Query: 202 SLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 + + + D++ + + ++ ID + +A G R +D G Sbjct: 186 DVTPAEWHALWTDLVELMHEGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGG----EV 237 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + PC CG IR A R+ F+C CQ+ Sbjct: 238 YVYRRADLPC-HICGGEIRTADLAARNLFWCPACQR 272 >gi|28572527|ref|NP_789307.1| endonuclease VIII [Tropheryma whipplei TW08/27] gi|28410659|emb|CAD67045.1| endonuclease VIII [Tropheryma whipplei TW08/27] Length = 294 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 54/316 (17%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR---GKKIIDVSRRAKYL 60 +PE I R+ + N I + RF S R +K+I K L Sbjct: 1 MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRF------SPGARLLDKQKMISAKAYGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTIS---------LTNNTNTK 110 L+ E N + VHLG+ G++ + SCA I +I +T N+ + Sbjct: 55 LLGFENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGST 114 Query: 111 K----YRVIYNDPRRFGFMDLVETSLKYQYPP--------------LRTLGPEPADNSFN 152 +++ + + +T+ P + LGP+P N Sbjct: 115 PGASWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMG 174 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 K N + L+NQ +AGIGNIY E L+R +++P + +N P+D Sbjct: 175 YNRFIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNP------FLTSNTIPED 228 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L ++ + +L I G + ++ + G++ VY PC S C I Sbjct: 229 TLKRIWDDWTVLLKCGIKTG-----QMITMNKAPGHW-----VYNHHKSPC-SVCFHPID 277 Query: 273 RIVQAGRSTFYCTYCQ 288 + AGR ++C CQ Sbjct: 278 CVNVAGRKLYWCVVCQ 293 >gi|297160503|gb|ADI10215.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P S + + + +++ LL+QK+VAG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLRPSDDGDRAWARVSRSRTSVAALLLDQKVVAGVGNVYRAEVLFRHGVDPYRAGR 181 Query: 202 SL--IQNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 L + + D++ + + ++ ID + +A G R +D G Sbjct: 182 DLSRAEWDAIWADLVALMREGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGGEVY--- 234 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + +PC CG +R A R+ F+C CQ+ Sbjct: 235 -VYRRHRQPC-HICGGEVRTADLANRNLFWCPNCQR 268 >gi|50955599|ref|YP_062887.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952081|gb|AAT89782.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 261 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 41/264 (15%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P + + G+++ +V R K+LLI + G+ S+ HL M GS+ E ++P Sbjct: 28 FRVPAYATVDLSGQRVDEVVSRGKHLLIRVGGH-SVHSHLKMDGSW--EVYPPGGRWRHP 84 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H + T + G +DL+ + + + LGP D ++A Sbjct: 85 AHQARVVLRTAEGEAVGFL--------LGTLDLLPREREDEA--VDDLGPNLLDPGWDAA 134 Query: 155 YLTHQF----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + + + ALL+Q+ +AGIGN+Y E + + P R R + Sbjct: 135 SAAEAVRRLRERPGAPVAVALLDQRALAGIGNVYANELCFLRGMLPTRPVRE--ADIPAA 192 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDY-VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 D+ ++L+ ++ RD V + VYG+ G+PC CG Sbjct: 193 VDLAHRLL---------------AANRDRSVRVTTGDTRRGRTTWVYGRQGQPC-RRCGT 236 Query: 270 MIRR-----IVQAGRSTFYCTYCQ 288 IRR R T +C CQ Sbjct: 237 PIRRGRLGYTELTERVTSFCPVCQ 260 >gi|29831970|ref|NP_826604.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29609087|dbj|BAC73139.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 269 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 31/241 (12%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + I +HLG+ G P V + L N+T+ Y Sbjct: 51 GKHLFLGFRRADWIHIHLGLFGKVGFGDAPAPPPTDT-----VRLRLANDTS-------Y 98 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R L+ K LGP+P + + + +++ L++QK+ Sbjct: 99 VDLRGPTTCALITDGEKRAI--HDRLGPDPLRPDADPARAYDRVSRSRTSVAALLMDQKV 156 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAI----- 229 +AG+GN+Y E L+R + P R R L + + D++ + + ++ ID + Sbjct: 157 IAGVGNVYRAEVLFRHGIDPYRTGRELTRREWDAIWADLVALMREGVRNNRIDTVRPEHT 216 Query: 230 -DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +A G R +D G VY + PC CG IR A R+ F+C CQ Sbjct: 217 PEAMGRPPR----VDDHGGEVY----VYRRANLPC-HICGGEIRTAGLAARNLFWCPTCQ 267 Query: 289 K 289 + Sbjct: 268 Q 268 >gi|256832270|ref|YP_003160997.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685801|gb|ACV08694.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Jonesia denitrificans DSM 20603] Length = 284 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 124/323 (38%), Gaps = 76/323 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L V+ ++T + L ++ D A RG + DV AK+L Sbjct: 1 MPEGDTVLSVANRLHEVLGGHSLTRVDLRWPSVSVD------AFNRGV-VHDVDAYAKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +S+ HL M G + + T + Q + T+ T+ V Y Sbjct: 54 FVRFASGVSLHTHLRMDGVWRVVPTGS----REAQASSPTVRAVLATSEWTC-VGYE--- 105 Query: 121 RFGFMDLVETSL------------------------KYQYPPLRTLGPEPADNSF----- 151 G MD+V T+ + + P R L P A S Sbjct: 106 -LGMMDIVPTARERDLIAHLGPDILADQCVPTHLLDQARADPARFLAPRRAHTSLLVSDR 164 Query: 152 NAIYLTHQF--HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + I +F + + LL+Q +V+GIG I++ E L+ ++SP+R T Sbjct: 165 DWIEALSRFAAQPQTRPIGETLLDQSVVSGIGTIFMAEGLFTHRISPMRPL------ADT 218 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 P L L+ I+ LI + + R +VH + G+PC+ CG Sbjct: 219 P---LVPLLASIRGHLIRGVVRPVAGRRIHVH---------------SRRGQPCM-RCGT 259 Query: 270 MI-RRIV---QAGRSTFYCTYCQ 288 I RR+V A R FYC CQ Sbjct: 260 PIARRLVGPPTAQRPAFYCPTCQ 282 >gi|28493363|ref|NP_787524.1| DNA glycosylase [Tropheryma whipplei str. Twist] gi|28476404|gb|AAO44493.1| putative DNA glycosylase [Tropheryma whipplei str. Twist] Length = 294 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 17/147 (11%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P N K N + L+NQ +AGIGNIY E L+R +++P Sbjct: 164 LGPDPVVNPMGYNRFIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNP----- 218 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 + +N P+D L ++ + +L I G + ++ + G++ VY Sbjct: 219 -FLTSNTIPEDTLKRIWDDWTVLLKCGIKTG-----QMITMNKAPGHW-----VYNHHKS 267 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC S C I + AGR ++C CQ Sbjct: 268 PC-SVCFHPIDCVNVAGRKLYWCVVCQ 293 >gi|229820940|ref|YP_002882466.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229566853|gb|ACQ80704.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 267 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 42/297 (14%) Query: 4 LPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE ++ L+ V + +T + L LR+ P A G + + K+LL Sbjct: 1 MPEGDV----LLRVARRLTSALDGAALTHAELRW--PSLGGADLVGVRSLGTVSVGKHLL 54 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + ++ HL M G++ +E T + + P T ++ T + + D Sbjct: 55 TRFDDGRTLHTHLRMDGTWRVEPTE--RVARTPALARRT-AVRAVLGTPSWTCLGMD--- 108 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNA----IYLTHQFHKKNSNLKNALLNQKIV 177 G MDLV T + + + LGP+ + + A + + + L++Q+++ Sbjct: 109 LGMMDLVRT--RDEASVVGHLGPDVVGDDYEAHGRAAIVAGIAAQGTRPIGEILIDQRVL 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIG IY+ E+L+R ++ P R + D + L+ + +++ A +S R Sbjct: 167 AGIGTIYLAESLFRHRIRPWRPANEV--------DDVGSLVDTARALML----ASANSPR 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQK 289 D G V+G+ G C CG I + G R FYC CQ+ Sbjct: 215 VTATGDTRAG---RGTLVHGRAGRSC-PRCGTAI-AVAAVGTPPYDRPAFYCPDCQR 266 >gi|322698696|gb|EFY90464.1| formamidopyrimidine-DNA glycosylase [Metarhizium acridum CQMa 102] Length = 305 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 31/236 (13%) Query: 70 IIVHLGMSGSFIIEHTSCA----------KPIKN--PQHNHVTISLTNNTNTKKYRVIYN 117 +++H GM+G I A +KN P+ I + V + Sbjct: 7 LVMHFGMTGWVHIRGEQTAYTNYYKKTKDSELKNWPPKFWKFQIKTEGKPEVE---VAFT 63 Query: 118 DPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNLKNALLN 173 D RRFG + LV+ +Y PL+ GP+P + F YL + ++ +K LL+ Sbjct: 64 DARRFGRVRLVDCPGADIRKYTPLKENGPDPVIDTDRFTEEYLRGKMQARHVPVKALLLD 123 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++GIGN E L++AKL P + + S + KL + I+ V A+D G Sbjct: 124 QAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE------IKKLYECIRYVCQTAVDKLG 177 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + H F + + GK L N G+ + I GR++ Y QK Sbjct: 178 DSDQFPEHW-----LFNHRWGKGGKGSSSKLPN-GEKLAFITVGGRTSCYAPEVQK 227 >gi|227497434|ref|ZP_03927666.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] gi|226833110|gb|EEH65493.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] Length = 360 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R LGP+P + ++ + L++Q +++G+GNIY E+L R +SP Sbjct: 214 RRLGPDPLRPDGDPQVFVDAVRRRRKAVGELLMDQSVISGVGNIYRAESLLRRGVSP--- 270 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNA-FSVY 256 + N + L+ L +++ ++ + G + + + + G + A + VY Sbjct: 271 ---FVPGNRVSEKRLHGLWEDLVPLMEYGVATGFITTVEPEDVPEPVPAGDEEAARWYVY 327 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PCL CG + AGR F+C CQ Sbjct: 328 HRTGRPCL-RCGTPVSEREVAGRRLFWCPRCQ 358 >gi|83644837|ref|YP_433272.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|83632880|gb|ABC28847.1| Formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 302 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/298 (25%), Positives = 118/298 (39%), Gaps = 41/298 (13%) Query: 1 MPELPEVEII-----RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPE P++ + RR L V++++ + L LR P A G K+ + R Sbjct: 1 MPEYPDITVYIDALERRVLGRVLESVELHSYFL----LRTAEPS--LEAVVGAKVTQLRR 54 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----QHNHVTISLTNNTNTKK 111 K + I + ++ ++ HL ++G P KN Q + + LT TKK Sbjct: 55 IGKRIAIGFDNDVWMVFHLMIAGRLHWRDAGKKTPGKNALISLQFPNGVLFLTE-AGTKK 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ G + L+ L PA + N LK AL Sbjct: 114 RASLHLVSGERGLAQINPGGLEILEADL------PA--------FQQALTRNNHTLKRAL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-D 230 + I +G+GN Y E L A+LSPI +T+ L N + LY+ + + D Sbjct: 160 TDPHIFSGVGNAYSDEILHAARLSPIAQTQKL---NAEEIERLYQACRSCLTTWTQRLRD 216 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + + V F+ +V+G+ PC CG ++RI A T YC CQ Sbjct: 217 QYGDAFPEKVTA------FREDMAVHGRYNLPC-PVCGGAVQRIRYATNETNYCPDCQ 267 >gi|227327538|ref|ZP_03831562.1| endonuclease VIII [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 263 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 117/294 (39%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH--FSAATRGKKIIDVSRRAK 58 MPE PE+ L+ + T+T + F FP + A G+++ + R K Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVW-------FAFPELKLYEAELVGQQVRQIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + H + G + + + + K L T+ ++ Sbjct: 54 ALLTYFSNDRVLYSHNQLYGVWRVVNAGESPETKR--------DLRVRLETQDRAILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQK 175 + L S +P L+ +GP+ D S + + LL+Q Sbjct: 106 ASDIEMLTLETLS---THPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+A+L+P + Q N L + EI ++ + + G+ Sbjct: 163 FLAGLGNYLRVEILWQAQLAP---QHTAAQLNEEQLQTLSHALLEIPRL---SYNTRGTV 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G+I +F V+ + GE C CG +I R + + R ++C +CQK Sbjct: 217 DENRHH--GAI----FSFKVFHREGERC-ERCGGIIERTMLSSRPFYWCPHCQK 263 >gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864] Length = 985 Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPELPE+E R L++ + V + + L FD P F+ G+ + DV R K Sbjct: 1 MPELPELERARNFLLLTCRGKKVVQVSVDEDTLVFDGVAPQQFAQQFVGRTVRDVKRHGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 ++ IE +G H G++G+F + + K K Sbjct: 61 HIWIEFDGGSDAAFHFGLTGNFFFKSQTSGKVFK 94 Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 17/121 (14%) Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP----ADNSFNAIYLTHQFHKKNSNLK 168 R+ + + R G + + S + PP+ LG +P +FNA + ++N +K Sbjct: 185 RLSFTNTCRLGRIRALADS--WAEPPICFLGFDPLTPVEQGAFNAALV-----RRNVPIK 237 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AG+GN E L++A + P + T +L + L L+ +IQ V+ A Sbjct: 238 ALLLDQSFLAGVGNWVADEVLYQAGIHPEQYTNTL------SGEQLAALLDKIQSVVRIA 291 Query: 229 I 229 + Sbjct: 292 V 292 >gi|291616721|ref|YP_003519463.1| Nei [Pantoea ananatis LMG 20103] gi|291151751|gb|ADD76335.1| Nei [Pantoea ananatis LMG 20103] Length = 263 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 118/301 (39%), Gaps = 53/301 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + L M + + D+ F FP + GK++ + R K Sbjct: 2 MPEGPEIRRVADQLEMAIVGQPLADVW-------FAFPALKTYEPTLVGKRVESIETRGK 54 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYN 117 LL L++ H + G + I P P+ + + L ++Y+ Sbjct: 55 ALLTHFSNGLTLYSHNQLYGVWRI-----VSPDVQPETKRQLRVRLATADQAI---LLYS 106 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPE---PA--DNSFNAIYLTHQFHKKNSNLKNALL 172 ++L+ +P L +GP+ PA L+ +F ++ LL Sbjct: 107 ASD----IELLNAETLASHPFLNRIGPDVLSPALTPEEVKQRLLSARFRRRQ--FSGLLL 160 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DA 231 +Q +AG+GN E LW A+L P +SL ++ +DA DA Sbjct: 161 DQAFLAGLGNYLRVEILWLAQLLPHHNAQSLSESQ------------------LDAFSDA 202 Query: 232 GGSSLRDYVHIDGSIGYFQNA----FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 S R + G++ + + F V+ + G+ C CG +I + V + R ++C C Sbjct: 203 LLSVPRHAYRMRGTMKKYHSEAAFRFEVFHRQGKTC-RRCGTVIVKGVLSSRPFYWCPGC 261 Query: 288 Q 288 Q Sbjct: 262 Q 262 >gi|289706075|ref|ZP_06502448.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557277|gb|EFD50595.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 312 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%) Query: 37 FPHHFSAATRGKKIIDVSRRAKYLLIELEGN--------LSIIVHLGMSGSFIIEHTSCA 88 P H +A G + +V RAKYLL+ L L++I HL M G +++ Sbjct: 30 VPRHATADLTGWTVAEVLPRAKYLLMRLAPPAARPGARPLTLISHLKMEGRWLVSAVDA- 88 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD 148 + + T ++RV+ + G + LV T+ + L LGP+ D Sbjct: 89 ------RWGAPAWQVRAVLETAEHRVLGA---QLGLLTLVPTADEATV--LGHLGPDLLD 137 Query: 149 NSFN-----AIYLTHQFHKKNSNLKN----ALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 +++ A L + + + ALL+Q++V+GIGNIY CE L A + P R Sbjct: 138 PAWDTPDDGAALLVEGVRRLTARPERPVGLALLDQRLVSGIGNIYRCETLLLAGIDPHR 196 >gi|119717704|ref|YP_924669.1| formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] gi|119538365|gb|ABL82982.1| Formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] Length = 282 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 25/255 (9%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K+L I + +HLG+ G + P Q + Sbjct: 36 AALVDGQVLVGAEAWGKHLFIAFPDERFVHIHLGLYGKLDLVAGVEQVPAAVGQVRLRIV 95 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + + Y D R +LV + + GP+P + + Sbjct: 96 AADRSWHA------YADLRGATTCELVTREQRDAV--VARSGPDPLRADADPGRAWARIR 147 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQ 219 + + + L++Q ++AG+GN+Y E L+R ++ P R +L Q D++ + + Sbjct: 148 RSKAPIGGLLMDQAVLAGVGNVYRAELLFRHRIDPQRPGNTLRVGQWQAMWDDLVVLMRE 207 Query: 220 EIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 ++ ID + +A G R H VY +TG+PC CG +R Sbjct: 208 GVRTGRIDTVRPEHTPEAMGRPPRRDDH--------GGEVYVYRRTGQPC-HVCGATVRT 258 Query: 274 IVQAGRSTFYCTYCQ 288 GR+ F+C CQ Sbjct: 259 AELQGRNLFWCPRCQ 273 >gi|119962578|ref|YP_946580.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949437|gb|ABM08348.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 276 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 66/312 (21%) Query: 4 LPEVEIIRR-----NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 +PE + I R N + K +T +D F P + G + +V + K Sbjct: 1 MPEGDSIWRAATRLNEALAGKVITSSD---------FRVPRFATLNLSGWTMTEVVPKGK 51 Query: 59 YLLIELEG-------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 +LL+ L G L+I HL M G+++I + + K P H + T+ Sbjct: 52 HLLMRLAGPVDEEPGASRKPRALTIHSHLKMEGNWMI-YPPGGRWTK-PGHTARCVLRTD 109 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-N 164 + + + G +++V T+ + + + LGP+ ++ + + + Sbjct: 110 SADAVGFS--------LGILEVVPTAEEDKI--VGHLGPDLLGPDWDEEEALRRLRAEPD 159 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + ALL+Q+ +AGIGNIY CEA + + + P + L K + + +++ Sbjct: 160 VTVGFALLDQRKLAGIGNIYRCEACFLSGIHPALPVGEVPD--------LAKTVNDAKRL 211 Query: 225 LIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---- 278 L + + G + ++G + + VYG+ +PC CG +RR + AG Sbjct: 212 LGENLGPGRRT---------TLGPRAMRPGYWVYGRERQPC-RRCGTTVRRGLLAGPDGT 261 Query: 279 --RSTFYCTYCQ 288 R ++C CQ Sbjct: 262 EERDIYFCPRCQ 273 >gi|159037002|ref|YP_001536255.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] gi|157915837|gb|ABV97264.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] Length = 270 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 17/148 (11%) Query: 142 LGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGP+ ++ + + + + ALL+Q+ +AG+GN+Y CE L+ +SP Sbjct: 134 LGPDLLGPDWDPVEAVRRLTADPEATIGTALLDQRSLAGVGNLYKCEVLFLRGVSPWTPV 193 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 R++ L ++ Q++L G S GS Q + VYG+ Sbjct: 194 RAVPD--------LIGVVTLAQRLLAANRGHGTQS------STGSRHRGQTTY-VYGRWA 238 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +PC CG IRR Q R T++C CQ Sbjct: 239 QPC-RRCGTPIRRQEQDERVTYWCPTCQ 265 >gi|311280406|ref|YP_003942637.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] gi|308749601|gb|ADO49353.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] Length = 263 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 122/296 (41%), Gaps = 42/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ +L +K +T + F FP + G+ + + R K Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTGVW-------FAFPQLAQYQLLLVGQTVTHIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LL G L++ H + G + ++E + + + +K ++Y+ Sbjct: 54 ALLTHFSGGLTLYSHNQLYGVWRVVEAGTLPDTTR--------VLRVKLQTAEKAILLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-----AIYLTHQFHKKNSNLKNALL 172 ++++ +P L+ +GP+ D + A L F +N LL Sbjct: 106 ASD----IEMLTAEQLATHPFLQRVGPDVLDMALTPECVRARLLLPSF--RNRQFSGLLL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN E LW+ L+ K L + D L + +I ++ + Sbjct: 160 DQAFLAGLGNYLRVEILWQVGLTAQHKASGL---SDAQLDALCHALLDIPRL---SYRTR 213 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ + H G++ F+ F V+ + GE C CG +I + +QA R ++C CQ Sbjct: 214 GNADDNKHH--GAL--FR--FKVFHRDGETC-ERCGGIIAKTLQASRPFYWCPGCQ 262 >gi|303311231|ref|XP_003065627.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105289|gb|EER23482.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320039451|gb|EFW21385.1| formamidopyrimidine-DNA glycosylase [Coccidioides posadasii str. Silveira] Length = 416 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 26/254 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS-CAKPIKN--------PQHNHVTISLTNNT 107 KY + + ++H GM+G I+ + C K P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEGDGPWPPKFWKFRLVMDDD- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 KK + D RR G + LV+ + + PL+ GP+P + +L KK Sbjct: 120 --KKTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVTDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + +L + + +L I Sbjct: 178 KVPIKALLLDQSIMSGLGNWMADEVLYHSQIHPEQTSNTLDDSQ------IRELNSAIHY 231 Query: 224 VLIDAIDAGGSSLR 237 V ++D G S R Sbjct: 232 VCATSVDLLGDSAR 245 >gi|225872458|ref|YP_002753913.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792139|gb|ACO32229.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 313 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 108/289 (37%), Gaps = 62/289 (21%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+K+ V K+L + + VHLGM G F A P+ P+ + + L N Sbjct: 40 GRKLQAVEAYGKHLGYVFGRDTILHVHLGMYGDF----REGAMPLP-PEKGALRLRLWNR 94 Query: 107 TNTKKYRVIYNDPRRFGFMDL-VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 N + R G D + K+Q R LGP+P + ++N+ Sbjct: 95 ANWVELR---------GATDCSIFDGEKWQALVAR-LGPDPLRPESDPEPGFAIIARRNT 144 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSP----------------------------- 196 + L++Q + AGIGNIY E L+RA L P Sbjct: 145 PIGQLLMDQSVFAGIGNIYRAEFLFRAGLHPRTPGREVPRPSIAGIWKDARKLMPLGMID 204 Query: 197 ------IRKTRSLIQNNGTPKDILYKLIQEIQKVLI----DAIDAGGSSLRDYVHIDGSI 246 + K R+L + T +D K ++ +D R D +I Sbjct: 205 RRIVTTLAKDRALKRGPETNQDRALKRGEKTDSARSRKREATMDKASPRKRGGATADQAI 264 Query: 247 GYFQNAFS------VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + G+PCL CG I + AGR+ ++C CQK Sbjct: 265 PHQRGPAQDDQIHYVYRRHGKPCL-RCGTKIEKEEMAGRTVYWCPACQK 312 >gi|256787746|ref|ZP_05526177.1| DNA repair hydrolase (fragment) [Streptomyces lividans TK24] gi|289771633|ref|ZP_06531011.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] gi|289701832|gb|EFD69261.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] Length = 280 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 41/231 (17%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR-----VIYNDPRRFGFMD 126 +HLG+ G P V + L N+T R + DP + D Sbjct: 77 IHLGLFGKVAFGPVPAPPPTDT-----VRLRLANDTAHVDLRGPTTCALITDPEKRAIHD 131 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 LGP+P + + + + + L++QK++AG+GN+Y Sbjct: 132 --------------RLGPDPLRPDADPAAAHRRISRSRTTIAALLMDQKVIAGVGNVYRA 177 Query: 187 EALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRD 238 E L+R + P R + L + + +D+ + + ++ ID + +A G R Sbjct: 178 EVLFRHGIDPYRPGKDLTPAEWDTIWQDLTALMREGVRNNRIDTVRPEHTPEAMGRPPR- 236 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G VY + +PC CG I A R+ F+C CQK Sbjct: 237 ---VDDHGGEVY----VYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|34015259|gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group] gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza sativa Japonica Group] Length = 405 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 120/303 (39%), Gaps = 50/303 (16%) Query: 1 MPELPEVEIIRRNLMM--VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L V K + K + P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLG-------MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L + L+ G + + H C + + S T+ K Sbjct: 61 NLWLALDSPPFPSFQFGFLLYRMPIRNGWSYLHQGCGTEQIQKMDDGLEFSFTDKRRFAK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL---THQFHKKNSNLK 168 R F+D E PP+ LGP D F ++L +K + +K Sbjct: 121 IR----------FLDNPEA-----VPPISELGP---DALFEPLHLDDFVESLSRKKAPIK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++A++ P+ +T S+I K+ L Q I +V+ + Sbjct: 163 ALLLDQSFISGIGNWIADEVLYQARIHPM-QTASMIS-----KEKCKALHQCIIEVIEKS 216 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++ G +S + Y +N S K G+ + G+ I I GR++ Y Sbjct: 217 LEVGCNSSQ----------YPENWIFHSREKKPGKAFVE--GKKIDFITVGGRTSAYVPE 264 Query: 287 CQK 289 QK Sbjct: 265 LQK 267 >gi|70993580|ref|XP_751637.1| formamidopyrimidine-DNA glycosylase [Aspergillus fumigatus Af293] gi|66849271|gb|EAL89599.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus Af293] Length = 367 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNSF-NAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P AD +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHW-----LFKHRWG-KGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|300715872|ref|YP_003740675.1| Endonuclease VIII [Erwinia billingiae Eb661] gi|299061708|emb|CAX58824.1| Endonuclease VIII [Erwinia billingiae Eb661] Length = 250 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 36/277 (12%) Query: 17 VMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 +K T+TD+ F FP + A G+++ + R K +L L++ H Sbjct: 4 AIKGKTLTDVW-------FAFPQLKTYEPALLGERVEAIETRGKAMLTHFSNGLTLYSHN 56 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 + G + + AK +P N I K ++Y+ ++L+ Sbjct: 57 QLYGVWRV-----AKSGVDPATNR--ILRVRLAAEDKAILLYSASE----IELLNADTLM 105 Query: 135 QYPPLRTLGPEPADNSFNAIYL---THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P L+ +GP+ D + + + + LL+Q +AG+GN E LW Sbjct: 106 AHPFLQRVGPDVLDMTLTSEQVKARLLSSRFRRRQFSALLLDQAFLAGLGNYLRVEILWL 165 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A L+P K + L + I + + G S + H G++ Sbjct: 166 AGLAPQHKAQDLTEEQLALLADALLAIPRLSYL------TRGVSKENKHH--GAL----F 213 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +F V+ + G+PC CG +I + V + R ++C CQ Sbjct: 214 SFKVFHRAGQPC-ERCGGIIEKTVLSSRPFYWCPGCQ 249 >gi|70699884|gb|AAZ06853.1| formamidopyrimidine-DNA glycosylase [Microbacterium arborescens] Length = 336 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 12/153 (7%) Query: 142 LGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 LGP+P D + T +K + + L++Q +V+GIGN+Y E L+RA+++P Sbjct: 191 LGPDPLVDDLAEGEERFTATVRRKPTPIGLLLMDQSVVSGIGNVYRAEMLFRARVNPHTP 250 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVY 256 R + P++ + +L ++ ++L ++ G D + + ++ + + VY Sbjct: 251 GRDV------PEETVRELWRDWVRLLAIGVETGQMMTMDDLDPEAWRRAMAHRDDRHWVY 304 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G PC CG I A R ++C CQ+ Sbjct: 305 HRAGLPC-RVCGTAIVLEEMASRKLYWCPNCQR 336 >gi|169628665|ref|YP_001702314.1| formamidopyrimidine-DNA glycolase [Mycobacterium abscessus ATCC 19977] gi|169240632|emb|CAM61660.1| Probable formamidopyrimidine-DNA glycolase [Mycobacterium abscessus] Length = 265 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/288 (21%), Positives = 107/288 (37%), Gaps = 28/288 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + K+L + Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFT---EGAAAVNGRTFVQAHAWGKHLFHD 57 Query: 64 LEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 G + ++ VHLG+ G+F P+ + + + + P+ Sbjct: 58 Y-GPVGVVHVHLGLYGAFTELPVPMGLPVGQVRMRIEGAEFGTDLRGATACELIDAPQ-- 114 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D + L LGP+P + + K + + L++QKI+AG+GN Sbjct: 115 --VDAI----------LARLGPDPLRPRSDPASAFERIAKSHRPIGALLMDQKIIAGVGN 162 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 +Y E L+R ++ P R+ L L L ++ + + G D H Sbjct: 163 VYRSEVLFRRRIDPYREGSRLDPEQ------LTALWSDLVDRMRVGLRVGKIVTVDPEHD 216 Query: 243 DGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + G PC CG I R+ F+C CQ Sbjct: 217 CGDPSYAPDRPRTYVYRRAGAPC-RVCGTPILTAEMDARNLFWCPSCQ 263 >gi|254425007|ref|ZP_05038725.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] gi|196192496|gb|EDX87460.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] Length = 277 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 114/302 (37%), Gaps = 44/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I + ++ T++ FD F A G ++ +V R K + Sbjct: 1 MPEGPEIRIAADKIQRAIRPYPTTEVFF-----AFDHLKPFEADLSGCRVTEVETRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + LS+ H + G +++ K P+ N +N KK ++Y+ Sbjct: 56 LTHFDNGLSVYTHNQLYGKWMVR-----KAHDFPETNRQLRFAIHNE--KKSALLYSAS- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 L S +P L LGP+ L K L L+Q + Sbjct: 108 --DIQILSSQSEIENHPFLSKLGPDVLSKQLKPEVLQALLSAKKHCCRRLSTLYLDQHFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRK-----TRSLIQNNGTPKDILYK------LIQEIQKVLI 226 AGIGN E L+ A+L P + L I Y+ + ++ L Sbjct: 166 AGIGNYLRSEILFVAQLHPQMRPIDCTDEQLFTLANASISIAYQSYRYKGVTNDLD--LA 223 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + + A G S R+Y + V+G+ +PC + +I+ +V + R +YC Sbjct: 224 NRLKAKGLSYREY------------RYRVFGRVNQPCYACATPIIKEMV-SNRRIYYCPT 270 Query: 287 CQ 288 CQ Sbjct: 271 CQ 272 >gi|308177637|ref|YP_003917043.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307745100|emb|CBT76072.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 322 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/322 (25%), Positives = 125/322 (38%), Gaps = 74/322 (22%) Query: 28 LHRKNLRFD--FPHHFSAAT--RGKKIIDVSR-----------RAKYLLIELEGNLSIIV 72 LHR +FD F A T +G+ D R + K L +L + V Sbjct: 7 LHRLARQFDDVFGGQVVAVTSPQGRFASDAERIDGHHLEHAFAKGKQLFCRFSNDLYLRV 66 Query: 73 HLGMSGSF-------IIEHTSCAKPIK--------NPQHNHVTISLTNNTNTKKYRVI-- 115 HLG+ G+F +S P K +P+ T + R++ Sbjct: 67 HLGLYGAFSFGGDHYFTGASSIGAPRKIGERESGPSPESEQYT-GPPEPVGAVRARIVSE 125 Query: 116 --YND---PRRFGFMDLVETSLKYQYPPLRTLGPEP--------------ADNSFNAIYL 156 + D P +D + ++ L LGP+P D S A L Sbjct: 126 HGWADLRGPTACEVLDHDQVQIQ-----LGKLGPDPLIGSALRIRAAKGQVDPSLAATEL 180 Query: 157 THQFHKKNSNL---KNA----LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 F++ +NL K A L+NQ +++G+GNIY EAL+R ++SP + NG Sbjct: 181 EAGFNEFRANLLKTKTAIGIVLMNQALISGVGNIYRAEALFRNRISP------QLPANGL 234 Query: 210 PKDILYKLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 KL +I V+ D + G ++L + G + + NA+ VY + G C C Sbjct: 235 STQKAKKLWWDIVSVMEDGVRDGKIITTLPEDRDPLGVV-WPDNAYYVYQRQGMGC-RKC 292 Query: 268 GQMIRRIVQAGRSTFYCTYCQK 289 I A R ++C CQK Sbjct: 293 SAQISLAEVAARKLYWCPRCQK 314 >gi|21221083|ref|NP_626862.1| DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] gi|20520840|emb|CAC10002.2| putative DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] Length = 280 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 41/231 (17%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR-----VIYNDPRRFGFMD 126 +HLG+ G P V + L N+T R + DP + D Sbjct: 77 IHLGLFGKVAFGPVPAPPPTDT-----VRLRLANDTAHVDLRGPTTCALITDPEKRAIHD 131 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 LGP+P + + + + + L++QK++AG+GN+Y Sbjct: 132 --------------RLGPDPLRPDADPAAAHRRISRSRTAIAALLMDQKVIAGVGNVYRA 177 Query: 187 EALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRD 238 E L+R + P R + L + + +D+ + + ++ ID + +A G R Sbjct: 178 EVLFRHGIDPYRPGKDLTPAEWDTIWQDLTALMREGVRNNRIDTVRPEHTPEAMGRPPR- 236 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G VY + +PC CG I A R+ F+C CQK Sbjct: 237 ---VDDHGGEVY----VYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|297625920|ref|YP_003687683.1| formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921685|emb|CBL56242.1| Formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 271 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 38/260 (14%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 +A G ++ K+L + + ++ + +HLG+ G + T A P+ Sbjct: 36 AALIDGSTLVQAQAWGKHLFVRFDAPIADPIVHIHLGLIGK--LSFTELAPPV-----GQ 88 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 V + + + T R G S + + LG +P + + Sbjct: 89 VRVRINDGTWAADLR---------GPQICRLISEDEEAAATKKLGADPLRSDSDPERAWT 139 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI-------RKTRSLIQNNGTPK 211 + H+ + + L+NQ I AG+GNIY E L+R ++ P R + L+ N Sbjct: 140 KVHRSGKPIASLLMNQAIFAGVGNIYRAEVLFRHRIDPQCPGNKLHRASFDLMWN----- 194 Query: 212 DILYKLIQEIQKVLIDAI--DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 D++ + ++ ID + + +L +D G VY + +PCL CG Sbjct: 195 DLVQLMRLGVRDGRIDTVYPEHTPEALGRPPRVDAHGG----EVYVYRRADQPCLV-CGS 249 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 I GR F+C CQ+ Sbjct: 250 PIHETTLEGRHLFWCGRCQR 269 >gi|162455413|ref|YP_001617780.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] gi|161165995|emb|CAN97300.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] Length = 290 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/305 (22%), Positives = 114/305 (37%), Gaps = 51/305 (16%) Query: 1 MPELPEVE----IIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVS 54 MPE P++E I+ R L + + LH P A G +I V+ Sbjct: 1 MPERPDLEYVVPILARELAGAAVAAARAENSVVLH-----VLLPERLDALLPGAEIRRVA 55 Query: 55 RRAKYLLIELEGN--LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 RRA ++ EL+G L +++ ++G F I P + L + Sbjct: 56 RRAHAVVFELDGARALDLVISPMLAGRF---------SITRPGETRIPTDLA-------F 99 Query: 113 RVIYNDPRRFGFMDLVETSLKY--------QYPPLRTLGPEPAD-NSFNAIYLTHQFHKK 163 + D R D V+ S Y + P L+ +G + D F + Sbjct: 100 SLTLGDGRELRVRDDVQMSKVYVLARGDFDRLPGLQRVGLDVLDPRVFTQEAFRSAARGR 159 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 K+ L++ + +G+ Y E L+ A++ P +SL + +L I + Sbjct: 160 RDLAKDFLMDGTALDSMGDSYADEVLFEARIHPKATVQSLSEEETD------RLHAAIAR 213 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL DA + R +D + F V G+ G+PC CG +RR G + Sbjct: 214 VLGDATR---TIARRAPALDERLRDF---LKVRGRPGQPC-PRCGDKLRRASVHGHDAIF 266 Query: 284 CTYCQ 288 C CQ Sbjct: 267 CPACQ 271 >gi|239916878|ref|YP_002956436.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414670|ref|ZP_06246412.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838085|gb|ACS29882.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 313 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 36/215 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V++ +T +LR P H +A G + +V RAKYL Sbjct: 1 MPEGDSLVRVAHRLRPVLEGRVLT-----HADLRV--PRHATADLTGWTVAEVLPRAKYL 53 Query: 61 LIELEGN--------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L L++I HL M G +++ + + T + Sbjct: 54 LMRLTPPTARPGARPLTLISHLKMEGRWLVSAVDA-------RWGAPAWQVRAVLETAGH 106 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-----AIYLTHQFHKKNSNL 167 RV+ + G + LV T+ + L LGP+ D +++ A L + + Sbjct: 107 RVLGA---QLGLLTLVPTADEATV--LGHLGPDLLDPAWDTPDDGAALLAEGVRRLTARP 161 Query: 168 KN----ALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + ALL+Q++V+GIGNIY CE L A + P R Sbjct: 162 ERPVGLALLDQRLVSGIGNIYRCETLLLAGIDPHR 196 >gi|259909084|ref|YP_002649440.1| endonuclease VIII [Erwinia pyrifoliae Ep1/96] gi|224964706|emb|CAX56223.1| Endonuclease VIII [Erwinia pyrifoliae Ep1/96] Length = 229 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ L +K+ +TD+ F FP + G++II + R K Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVW-------FSFPTLQSYQQMLVGERIISIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I + S +P ++ + V ++ + T ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRIIN-SGVEPAQSKRVLRVRLAAADKT-----LLLYSA 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 + L++ +P L+ GP+ D + A L+ +F ++ LL+ Sbjct: 108 SD----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQ--FSGLLLD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 Q +AG+GN E LW+A+L+ K +L Sbjct: 162 QAFLAGLGNYLRIEILWQAQLAAQHKAETL 191 >gi|289744675|ref|ZP_06504053.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] gi|289685203|gb|EFD52691.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] Length = 166 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN + E L AK+SP Sbjct: 13 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAHSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 71 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 117 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 118 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 385 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 21/226 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE--HTSCAK-PIKNPQHNHVTISLTNN------- 106 KY + + ++H GM+G ++ HT + P + ++ +N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 107 -TNTKKYRVIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPEP-ADNSFNAI-YLTHQF 160 + K + D RR G + LV+ T ++ +Y PL+ GP+P D + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIR-KYSPLKENGPDPIVDKDIVTLDWLRKKV 179 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 K +K LL+Q ++GIGN E L+ AK+ P + + +L ++ Sbjct: 180 LSKRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQES 225 >gi|312140366|ref|YP_004007702.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|311889705|emb|CBH49022.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] Length = 265 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 53/253 (20%), Positives = 94/253 (37%), Gaps = 31/253 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ ++ K+L E L + VHLG+ G F P+ + Sbjct: 36 AALIDGRVLVRSDAWGKHLWHHYENGLVVHVHLGLYGKFTESPLPLEPPVGQVRMRMAGT 95 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + ++P+ + +E L GP+P + + Sbjct: 96 EFGTDLRGPTACEVLHEPQ----VAAIEARL----------GPDPLRADADPDRAWARIS 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K + + L++Q ++AG+GN+Y E L+R + P R K++ + Sbjct: 142 KSQTPIGALLMDQAVLAGVGNVYRAEILFRHGIHPERPG----------KNVSRAEFDAM 191 Query: 222 QKVLIDAIDAGGSSLRDYV------HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L+D ++ G + +V H D S + Y + G C CG I V Sbjct: 192 WADLVDLMNVGVRRGKMHVVRPEDDHGDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHAV 250 Query: 276 QAGRSTFYCTYCQ 288 GR+ F+C CQ Sbjct: 251 MKGRNLFWCPGCQ 263 >gi|215402744|ref|ZP_03414925.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] Length = 160 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN + E L AK+SP Sbjct: 7 PQPRALGPDALDVSTD--DLAGLLAGNTGRIKTVITDQKVIAGIGNAHSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI--GYFQNAFS 254 L L L + + VL DA+ R V ++ G ++ Sbjct: 65 FATAGKLSGAQ------LTCLHEAMASVLSDAV-------RRSVGQGAAMLKGEKRSGLR 111 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ +TG PC CG +R + A +S YC CQ Sbjct: 112 VHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|227114756|ref|ZP_03828412.1| endonuclease VIII [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 263 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 16/157 (10%) Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIVAGIGNIYVCEALWRA 192 +P L+ +GP+ D S + + LL+Q +AG+GN E LW+A Sbjct: 120 HPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFLAGLGNYLRVEILWQA 179 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 +L+P + Q N L + + EI ++ + + G+ D H G+I + Sbjct: 180 QLAP---QHTAAQLNEEQLQTLSRALLEIPRL---SYNTRGTVDEDRHH--GAI----FS 227 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 F V+ + GE C CG +I R + + R ++C++CQK Sbjct: 228 FKVFHREGERC-ERCGGIIERTMLSSRPFYWCSHCQK 263 >gi|326440923|ref|ZP_08215657.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] Length = 269 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 31/256 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + D K+L + + +HLG+ G ++ P P + V + Sbjct: 36 AALLDGQPLTDAEAHGKHLFLGFGALGWVHIHLGLFGK--VDFGDAPAP---PPTDTVRL 90 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 LT T K V P + E + ++ LGP+P + + + Sbjct: 91 RLT----TPKAHVDLRGPTTCALITDGEKTAVHER-----LGPDPLRPDDDPDRVWARLS 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQ 219 + + + LL+QKI+AG+GN+Y E L+R + P R R + + + D++ + + Sbjct: 142 RSRTTVAALLLDQKIIAGVGNVYRAEVLFRLGIDPYRAGRDITRAEWDAIWADLVELMRE 201 Query: 220 EIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 ++ ID + +A G R +D G VY + PC CG +R Sbjct: 202 GVRNNRIDTVRPEHMPEAMGRPPR----VDDHGG----EVYVYRRDRRPC-HVCGTEVRT 252 Query: 274 IVQAGRSTFYCTYCQK 289 A R+ F+C CQ+ Sbjct: 253 AGLAARNLFWCPACQR 268 >gi|62391849|ref|YP_227251.1| formamidopyrimidine-DNA glycosylase protein [Corynebacterium glutamicum ATCC 13032] gi|41222996|emb|CAF18941.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 269 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + KN T + RF +A G +I K+L +E Sbjct: 1 MPEGHVIHRLAGELTKNFGDTILDATSPQGRFTSE---AAIINGHRIAVAEAYGKHLFVE 57 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G+ E + + + L++ R P+ Sbjct: 58 FDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR----GPQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + Q + LG +P + + + + + ++ + L++QK+ AG+ Sbjct: 107 ---WCRLITDAERTQA--IGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGV 161 Query: 181 GNIYVCEALWRAKLSP--IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI------DAG 232 GNIY E L+R +SP I K + Q D++ + + ID + +A Sbjct: 162 GNIYRAETLFRLGISPFTIGKDITTAQFRSIWADLVGLMKDGVVTGRIDTVRPEHTPEAM 221 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G R H Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 222 GRPPRKDDH--------GGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 269 >gi|320637961|gb|EFX07730.1| endonuclease VIII [Escherichia coli O157:H7 str. G5101] Length = 263 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 111/293 (37%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + + + + T L T ++ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRV--------VDTGEESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +G + D + + + +N LL+Q Sbjct: 106 ASD---IEMLTPEQLTTHPFLQRVGSDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ N KD+ + + L+D I + Sbjct: 163 FLAGLGNYLRVEILWQVGLT----------GNHKAKDLNAAQLDALAHALLD-IPRFSYA 211 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 212 TRGQVDENKHHGALFR-FKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|289810522|ref|ZP_06541151.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 103 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 6/106 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 L+EL II+HLGMSGS I S A P + +H+HV + ++N Sbjct: 60 LLELPDGW-IIIHLGMSGSLRI--LSEALPAE--KHDHVDLVMSNG 100 >gi|299755916|ref|XP_001828971.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] gi|298411439|gb|EAU92978.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] Length = 370 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 25/223 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEV+ L V K +T + + + F+ F + + D R K Sbjct: 1 MPELPEVQRAVNTLKHVAKGKRITKVVTYPDPIVFNATTNEEFGKELENRTVSDAKRYGK 60 Query: 59 YLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIK-------------NPQHNHVTISLT 104 ++L+G ++H GM+G H KP+ P+ + L Sbjct: 61 VFYLDLDGKGKKPVLHFGMTGML---HVKGVKPMHYKEAPRKDSEDTWPPRFCKFILHLQ 117 Query: 105 NNTNTK----KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 N T + + V + D RR + L + ++ + P+ LG +P + + + Sbjct: 118 NPTGSSNGEPETEVAFIDARRLARIRLCTSPMEER--PISELGFDPLLSMPSLETFSRTV 175 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 K++ +K LL+Q AG+GN E L+ A++ P ++ +L Sbjct: 176 LKRSCPIKALLLDQSFSAGVGNWVADEVLYHARIHPEQRCNTL 218 >gi|315655723|ref|ZP_07908621.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315489787|gb|EFU79414.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 342 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + AL++Q ++AG+GNIY E L+ A+L+P R Sbjct: 192 LGPDPLRPDCDCGEFVKRCATRQKGIGEALMDQSVIAGVGNIYRAEVLYAARLNPFTPAR 251 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDY---VHIDGSIGYFQNA--- 252 + L ++ +++ L +++G ++ DY V + + G A Sbjct: 252 EVSMRK------LRRIWDWLEEYLPLGVESGRITTANPDDYAAFVERELAAGREPQAIDS 305 Query: 253 -FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PCL C ++ + GR ++C CQ+ Sbjct: 306 RYYVYQRQDRPCL-RCSTTVKLQIAGGRKLYWCPRCQR 342 >gi|297199678|ref|ZP_06917075.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713952|gb|EDY57986.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 269 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R ++ P R + Sbjct: 122 LGPDPLREDADPHTAYRRISRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHRVDPYRAGK 181 Query: 202 SLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 L + + D++ + + ++ ID + +A G R +D G Sbjct: 182 DLTPAEWDAIWADLVELMREGVRNNRIDTVRPEHTPEAMGRPPR----VDDHGG----EV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR A R+ F+C CQ Sbjct: 234 YVYRRATLPC-HICGGEIRTADLAARNLFWCPACQ 267 >gi|294812630|ref|ZP_06771273.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294325229|gb|EFG06872.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 19/245 (7%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ + D K+L + + +HLG+ G ++ P P + V + LT Sbjct: 99 GQPLTDAEAHGKHLFLGFGALGWVHIHLGLFGK--VDFGDAPAP---PPTDTVRLRLT-- 151 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T K V P + E + ++ LGP+P + + + + + Sbjct: 152 --TPKAHVDLRGPTTCALITDGEKTAVHER-----LGPDPLRPDDDPDRVWARLSRSRTT 204 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKV 224 + LL+QKI+AG+GN+Y E L+R + P R R + + + D++ + + ++ Sbjct: 205 VAALLLDQKIIAGVGNVYRAEVLFRLGIDPYRAGRDITRAEWDAIWADLVELMREGVRNN 264 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ID + + + + + VY + PC CG +R A R+ F+C Sbjct: 265 RIDTVRP--EHMPEAMGRPPRVDDHGGEVYVYRRDRRPC-HVCGTEVRTAGLAARNLFWC 321 Query: 285 TYCQK 289 CQ+ Sbjct: 322 PACQR 326 >gi|23309003|ref|NP_602196.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|21325773|dbj|BAC00394.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 271 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + KN T + RF +A G +I K+L +E Sbjct: 3 MPEGHVIHRLAGELTKNFGDTILDATSPQGRFTSE---AAIINGHRIAVAEAYGKHLFVE 59 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G+ E + + + L++ R P+ Sbjct: 60 FDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR----GPQ 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + Q + LG +P + + + + + ++ + L++QK+ AG+ Sbjct: 109 ---WCRLITDAERTQA--IGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGV 163 Query: 181 GNIYVCEALWRAKLSP--IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI------DAG 232 GNIY E L+R +SP I K + Q D++ + + ID + +A Sbjct: 164 GNIYRAETLFRLGISPFTIGKDITTAQFRSIWADLVGLMKDGVVTGRIDTVRPEHTPEAM 223 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G R H Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 224 GRPPRKDDH--------GGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 271 >gi|218198635|gb|EEC81062.1| hypothetical protein OsI_23872 [Oryza sativa Indica Group] Length = 422 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 19/174 (10%) Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D RRF + L E PP+ LGP+ ++ +K +K LL+Q Sbjct: 152 FTDKRRFARVRLFEDP--ETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQS 209 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++GIGN E L++++ P++ SL + + + L++ IQE+ K Sbjct: 210 FISGIGNWIADEVLYQSRTHPLQIASSLSRESC---EALHQSIQEVVKYA---------- 256 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +D F + + + G+ GQ I I GR+T Y QK Sbjct: 257 ----VEVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQK 306 >gi|310831293|ref|YP_003969936.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] gi|309386477|gb|ADO67337.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] Length = 279 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 17/157 (10%) Query: 49 KIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KI + + K++ E N + LGMSG++ K+ +HN+++ + Sbjct: 51 KITKIDCKGKFIYFIFENNQVLFNTLGMSGNW---------QTKDSKHNNISFYFKDIKT 101 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 T + +ND R FG + S++ L LGP+ ++ + KK ++ K Sbjct: 102 T----LYFNDYRNFG--TFMYQSIEQLNKKLNELGPDILIDTDKLSEFKKKLDKKRNDTK 155 Query: 169 --NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 ALL+QK+V+G GN E L+ K+SP R+ ++L Sbjct: 156 IAVALLDQKVVSGCGNYLRAEVLYHCKISPFREIKNL 192 >gi|309774801|ref|ZP_07669823.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] gi|308917486|gb|EFP63204.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] Length = 273 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 36/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I ++L T+ I + + +F F P + +G+ I + R Sbjct: 1 MIELPEARTIAKDLRKCCIGKTIQSISGNFTDHKFTFYYGDPDTYHELLKGRSITAIIDR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN----NTNTKKY 112 Y+ +E+E N ++ G + + A+P + + + + ++ T+ N T Y Sbjct: 61 NFYVELEIE-NFVLVFRDGANIRWY------AQP-RAFKKSKLLLTFTDGSCLNITTSMY 112 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNA 170 VI + G+ D T + PL D +F ++ +++ L K Sbjct: 113 AVISVFSKAVGWQDTYYTKELHSLSPL--------DPNFTLETFLNEINEETEKLSIKAF 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L Q+ +GIGN + L+ A L P RK +L G + L+ I+ + ++D D Sbjct: 165 LTTQQRFSGIGNGVCQDILFHAGLHPKRKVHTL---TGDERSSLFLSIKHTLQRMVD--D 219 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G + + + G GY S + G P CG I++ G S +YC CQK Sbjct: 220 GGRDTEKTIFNEKG--GYHTIMSSRHFLEGCP---KCGGTIQKEQYMGGSIYYCPSCQK 273 >gi|300788119|ref|YP_003768410.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299797633|gb|ADJ48008.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 269 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 46/294 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPE V ++ + M T+ LR +F P + G++++DV K Sbjct: 1 MPEGDTVFLVAKRFANAMTGKTL---------LRGEFRVPQLATVDLSGREVLDVGTVGK 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L GNL++ HL M G + + + + AK + P H+ I + +RV +D Sbjct: 52 HLFTRFSGNLTLHSHLLMDGMWDV-YPAGAK-WRRPGHHARVIFTAADVQVIGFRV--HD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS----NLKNALLNQ 174 + LV TS ++ + LGP+ D + +L + L ALL+Q Sbjct: 108 ------LKLVATSKEHDL--VAHLGPDLLDPKWTDEHLKQAIANLTAAPARELGLALLDQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AG+GN+Y CE + ++P + + + +K+L+ AG Sbjct: 160 HVLAGVGNLYKCEIAFLLGVTPWTPVSEVDAG---------RTVALARKLLLANAIAGRF 210 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI----VQAGRSTFYC 284 H+D + + VY +T + C G+++ R VQ R T++C Sbjct: 211 DQSTTGHLDRNRKNW-----VYERTRQGCFRCGGKLLVRTQGHDVQR-RPTWFC 258 >gi|329894679|ref|ZP_08270483.1| Endonuclease VIII [gamma proteobacterium IMCC3088] gi|328922841|gb|EGG30171.1| Endonuclease VIII [gamma proteobacterium IMCC3088] Length = 275 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/301 (21%), Positives = 123/301 (40%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + V+ + +++ F P F G ++ D+ R K Sbjct: 1 MPEGPEIRRAADRIAKVVAGRVI-------EHVEFGLPRLQEFEGMLSGLRVTDLETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYN 117 LL + +L++ H + G + + K + P+ N + ++L T++ V+Y+ Sbjct: 54 ALLTHFDNDLTLYSHNQLYGRWYV-----VKRDRMPKTNRSLRVALHTATHSA---VLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKK--NSNLKNALLNQ 174 ++++ + L +GP+ + Q H K L + L+Q Sbjct: 106 ASD----IEVLTADELITHKFLSRIGPDILSKDLVPQRVVEQLEHAKFQGRKLAHLYLDQ 161 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID---- 230 +AG+GN E L+ A+++P N PKD+ + + +D Sbjct: 162 GFLAGVGNYLRSEILFEARVNP----------NLRPKDLSPAQRMALGEATLDISKRAYK 211 Query: 231 -AGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AG ++ + V + G ++ F V+ + G PC CG + ++ +GR +YC C Sbjct: 212 TAGITNDLERVALLKEQGVKRSQFRHHVFARQGRPCY-ECGTKVTKVDLSGRRLYYCAMC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|227506303|ref|ZP_03936352.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227197115|gb|EEI77163.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 272 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 L +G +P + L + H+ + ++ + L++Q + AG+GNIY E L+R +SP Sbjct: 120 LAKIGHDPIREDASPANLWPRVHRSSRSIGSLLMDQHLFAGVGNIYRAEVLFRQNISPFI 179 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQK-----VLIDAI------DAGGSSLRDYVHIDGSIG 247 L ++ D++++ + E+ + ID + +A G + R H G Sbjct: 180 AGNELDRHE---FDVIWEDLVELMRAGVPTARIDTVRPEHTPEAMGRAPRKDDH--GGEV 234 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y VY + G PC CG++I GR+ F+C CQ Sbjct: 235 Y------VYRRAGMPCYI-CGELIAEKKLEGRNLFWCPTCQ 268 >gi|237785613|ref|YP_002906318.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758525|gb|ACR17775.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] Length = 269 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 36/243 (14%) Query: 57 AKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+L I+ E N + + +HLG+ GS + + A+P V + + ++T R Sbjct: 51 GKHLFIDFEANQAAHVVYIHLGLIGS--LRFSDLAEP-----RGQVRLRIASDTRAADLR 103 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 P+ + L+ K + LG +P D + + + + + L++ Sbjct: 104 ----GPQ---WCRLITDEEKDT--AIGKLGADPLDPHADPSRSYQRIKRSSKPISTLLMD 154 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI-- 229 Q I AG+GNIY E L+R L+P + + L ++ D++ + + ID + Sbjct: 155 QHIFAGVGNIYRAETLFRLGLNPELRGKDLTDDDLHAIWNDLVETMTMGFRVGKIDTVRP 214 Query: 230 ----DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A G R H G Y VY + G PC CG I GR+ F+C Sbjct: 215 EHTPEAMGREPRVDAH--GGEVY------VYRRAGLPCYV-CGTTIVERKVDGRNLFWCP 265 Query: 286 YCQ 288 CQ Sbjct: 266 TCQ 268 >gi|317480425|ref|ZP_07939522.1| zinc finger protein [Bacteroides sp. 4_1_36] gi|316903417|gb|EFV25274.1| zinc finger protein [Bacteroides sp. 4_1_36] Length = 277 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 39/301 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGDPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S I P + + ++ +++ + Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGDKI--PANYQLLLTFNDDS------FLV 108 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +GF+++ S + +Y L P + Y +F K + K L + Sbjct: 109 FTVAMYGFINVYPDSYIDNKYYKLSRESISPLSDK----YTEAEFEKLVAEAKKTLSAKA 164 Query: 176 IVA------GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ++A G+GN + L+ A+++P +K L N KD+L+ ++E L+D Sbjct: 165 LLATNQRIPGVGNGVTQDILFNARINPKQKVLLLSDNQ---KDVLFNALKE---TLVDMT 218 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG + ++ G+ G ++ S KT + PCL CG I + G S +YC CQ Sbjct: 219 FEGGRDTQTDLY--GNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQ 273 Query: 289 K 289 + Sbjct: 274 Q 274 >gi|302528489|ref|ZP_07280831.1| endonuclease VIII [Streptomyces sp. AA4] gi|302437384|gb|EFL09200.1| endonuclease VIII [Streptomyces sp. AA4] Length = 272 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 39/263 (14%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 F P + G+++ V K+L G+L++ HL M GS+ I+ + P Sbjct: 28 FRHPELATVDLAGREVHGVGTVGKHLFTRFSGDLTLHSHLKMDGSWKIQ--AAGAKWAMP 85 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H+ + +T + +R DL ++ + LGP+ D + Sbjct: 86 AHHARVVLMTEDVQAVGFR----------LHDLKLLPTAEEHTLVDHLGPDLLDPQWTDE 135 Query: 155 YLTHQFH----KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + K L +ALL+Q+++AG+GN+Y CE + +SP Sbjct: 136 HAALAAANLSAKPERELGDALLDQRVMAGVGNLYKCEISFLLGVSP-------------- 181 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA--FSVYGKTGEPCLSNCG 268 + + E+ A+ + H + G + VY +T + C G Sbjct: 182 ----WTPVSEVDPARAVALARKLLVANAWRHEQATTGDLRRGRRTWVYERTRQGCFRCGG 237 Query: 269 QMIRRIVQAG---RSTFYCTYCQ 288 +++ R G R T+ C CQ Sbjct: 238 RLLVRQQGDGQYQRPTWCCPRCQ 260 >gi|325068496|ref|ZP_08127169.1| formamidopyrimidine-DNA glycosylase [Actinomyces oris K20] Length = 169 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + L + LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L + L+ ++ HLGMSG ++ T+ A +H + + +T Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTVATAPDAAPESHRAAAFLADPDT 112 >gi|296807993|ref|XP_002844335.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] gi|238843818|gb|EEQ33480.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] Length = 392 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 16/225 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F +GK +I ++ Sbjct: 1 MPELAEVARIVNYIRKHLVGHTIAKVVANHDDLLFGKVGTSAEEFKKHMQGKTVIGTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTIS------LTNNTN 108 KY + + ++H GM+G I E+T KN L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKNENFEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 +K LL+Q ++G+GN E L+ A++ P + + +L N T Sbjct: 181 VPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIT 225 >gi|261822349|ref|YP_003260455.1| endonuclease VIII [Pectobacterium wasabiae WPP163] gi|261606362|gb|ACX88848.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium wasabiae WPP163] Length = 263 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 36/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L+ + T+T + F FP + G+++ + K Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVW-------FAFPELKPYETQLVGQQVRQIETHGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + H + G + + + + K L T+ ++ Sbjct: 54 ALLTYFSNDRVLYSHNQLYGVWRVANAGESPETKR--------DLRIRLETQDRAILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQK 175 ++++ +P L+ +GP+ D S + + LL+Q Sbjct: 106 ASD---IEMLTQETLATHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+A+L+P L N L + + EI ++ + + G+ Sbjct: 163 FLAGLGNYLRVEILWQAQLAPQHTASQL---NEEQLQTLSRALLEIPRL---SYNTRGTV 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 --DENHHHGAI----FSFKVFHREGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|315445737|ref|YP_004078616.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315264040|gb|ADU00782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 250 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 42/271 (15%) Query: 25 DICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 D R+ +R D P + + G+ + +V R K+L I + G SI HL M G+++I Sbjct: 16 DALEGRELIRCDIRVPRYAAVDLSGQVVDEVLSRGKHLFIRV-GQASIHSHLKMDGAWVI 74 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 ++ P + + T N+ G +++++ + + + L Sbjct: 75 GR------VRVPTYKIRIVLETANSRASGVD--------LGVLEVLDRATDMEA--VEHL 118 Query: 143 GPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 GP+ ++A + + L LL+Q+++AG+GN++ E + L P Sbjct: 119 GPDLLGEDWSAEVAAANLVADPERPLAETLLDQRVMAGVGNVFANELSFVFGLRP----- 173 Query: 202 SLIQNNGTPKDIL---YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 GTP L ++ Q++L + LR G+ Q+ + VYG+ Sbjct: 174 ------GTPVGELTDPLRVANRAQQMLWL------NRLRVNRTTTGNTRPGQDVW-VYGR 220 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G PC CG I R T++C CQ+ Sbjct: 221 AGLPC-RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|296270386|ref|YP_003653018.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296093173|gb|ADG89125.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 269 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 106/294 (36%), Gaps = 34/294 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE II R ++ + + +F +A G+++ K+L + Sbjct: 1 MPEGHIIHRLAAEYARSFAGGPVAVSSPQGKFS---DSAALLDGQRMHGTDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P+ V + L + D R Sbjct: 58 FGPLGWVRIHLGLYGKVTFGDDPAPAPV-----GAVRLRLAGGGR-------WADLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ K LGP+P + + + + + + LL+Q+++AG+GN+ Sbjct: 106 ACELITDEEKRAV--HARLGPDPLRDGDDPERAWARISRSRAPIAALLLDQRVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTP--KDILYKLIQEIQKVLIDAI------DAGGSS 235 Y E L+R + P R L + D+ + Q + ID + +A G Sbjct: 164 YRAEVLFRHGIDPYRPGCELTRAEWEALWSDLAGLMRQGVANGRIDTVRPEHTPEAMGRP 223 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R H VY + G PC CG IR R+ ++C CQ+ Sbjct: 224 PRVDDH--------GGEVYVYRRAGSPC-HVCGAEIRTAELESRNLYWCPACQR 268 >gi|239941135|ref|ZP_04693072.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 15998] gi|239987613|ref|ZP_04708277.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 11379] gi|291444576|ref|ZP_06583966.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291347523|gb|EFE74427.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 277 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHGIDPYRAGR 181 Query: 202 SLIQN--NGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 L + + D++ + + ++ ID + +A G R H Sbjct: 182 DLTRAEWDTVWADLVELMREGVRNNRIDTVRPEHLPEAMGRPPRKDDH--------GGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 234 YVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|258652633|ref|YP_003201789.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] gi|258555858|gb|ACV78800.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] Length = 282 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 25/231 (10%) Query: 66 GNLSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 G+ ++ VHLG++G + A+PI T ++ ++ P+ Sbjct: 59 GDRAVHVHLGLAGKLAFVGDDGGGAARPI--------TGAIRWRVENERGYADLRGPQAC 110 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D + ++ PL GP+P + + + + + L++Q+I AG+GN Sbjct: 111 KLVD--DAGIRSITDPL---GPDPLREDADPEVGWARVRRSATPIGLLLMDQRISAGVGN 165 Query: 183 IYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 I+ E L+R ++ P+ + R L + + D++ + ++K ID + D V Sbjct: 166 IFRAEVLYRHRIDPMMQGRLLRRKEWDAIWTDLVGLMHDAVRKGRIDTV----RPEHDPV 221 Query: 241 HIDGS--IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + + CL C +R GR+ F+C CQ+ Sbjct: 222 AMGRAPRVDRHGGEVYVYRRADQACLV-CATPVRTTTLGGRNLFWCPSCQR 271 >gi|257068348|ref|YP_003154603.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] gi|256559166|gb|ACU85013.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] Length = 350 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 37/176 (21%) Query: 139 LRTLGPEP---ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 L LGP+P + + + L+NQK+VAGIGNIY E L+RA+L Sbjct: 157 LDRLGPDPLRPDPGGRERRRFVEAVRRSRTTIGALLMNQKVVAGIGNIYRAELLFRARLD 216 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR----DYVH-------IDG 244 P R D+ + +E+ + L+ + G + R H ++ Sbjct: 217 PFVPGR----------DLTAGMCEEMWEDLVALMAYGARTGRIVTTQPAHRDVEARIVER 266 Query: 245 SIGYFQN------------AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S G QN +F VY + PC CG +R A R+ F+C CQ Sbjct: 267 SRGTRQNGDEDPEVVPREKSFYVYHRQTLPC-RLCGTTVRSGDLAARTVFWCPRCQ 321 >gi|290960360|ref|YP_003491542.1| DNA repair hydrolase [Streptomyces scabiei 87.22] gi|260649886|emb|CBG73002.1| putative DNA repair hydrolase [Streptomyces scabiei 87.22] Length = 274 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 17/156 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + LL+QK++AG+GN+Y E L+R + P R + Sbjct: 127 LGPDPLRADADPARAYARVSRSRTTIAALLLDQKVIAGVGNVYRAEVLFRHGIDPYRAGK 186 Query: 202 SLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 + + + D++ + + ++ ID + +A G R +D G Sbjct: 187 DITPAEWDAIWTDLVGLMREGVRHNRIDTVRPEHTPEAMGRPPR----VDDHGG----EV 238 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + PC CG +R A R+ F+C CQ+ Sbjct: 239 YVYRRAALPC-HLCGGEVRTADLAARNLFWCPACQQ 273 >gi|284989429|ref|YP_003407983.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] gi|284062674|gb|ADB73612.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] Length = 269 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 11/153 (7%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 L LGP+P + + + + L++Q ++AG+GN+Y E L+R +SP R Sbjct: 123 LDRLGPDPLRPRSDGAVAHRRIAGSRTAIGALLMDQSVLAGVGNVYRAEILFRHGVSPFR 182 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG---SSLRDYVHIDGSIGYFQNAFSV 255 R + + GT + L+ VL+ A G ++ ++ G ++A V Sbjct: 183 PGRDV--DAGTWAAMWADLV-----VLMRAGVRMGRIVTTRPEHRTRRGGAVRREDAHYV 235 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y +TG PC C ++ V GR+ ++C CQ Sbjct: 236 YRRTGLPC-RVCATPVQTQVMVGRNLYWCPVCQ 267 >gi|160891963|ref|ZP_02072966.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] gi|156858441|gb|EDO51872.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] Length = 277 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 39/301 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGNPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S I P + + ++ +++ + Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGDEI--PANYQLLLTFNDDS------FLV 108 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +GF+++ S + +Y L P + Y +F K + K L + Sbjct: 109 FTVAMYGFINVYPDSYIDNKYYKLSRESISPLSDK----YTEAEFEKLVAEAKKTLSAKA 164 Query: 176 IVA------GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ++A G+GN + L+ A+++P +K L N K++L+ ++K L+D Sbjct: 165 LLATNQHIPGVGNGVTQDILFNARINPKQKVLLLSDNQ---KEVLF---NALKKTLVDMT 218 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG + ++ G+ G ++ S KT + PCL CG I + G S +YC CQ Sbjct: 219 SEGGRDTQTDLY--GNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQ 273 Query: 289 K 289 + Sbjct: 274 Q 274 >gi|72382399|ref|YP_291754.1| endonuclease VIII [Prochlorococcus marinus str. NATL2A] gi|72002249|gb|AAZ58051.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Prochlorococcus marinus str. NATL2A] Length = 281 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 115/302 (38%), Gaps = 45/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE IRR + K + +I N ++ + + I D++ R K + Sbjct: 1 MPEGPE---IRRAADKISKVLIGEEII--ESNFYYERIKEKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + N S+ H + G + + + K + + T N + + + Sbjct: 56 LIRFKNNWSMYSHNQLYGRWTVNLNTT----KVKSRRALRVVFTTNKHAVRLWSATD--- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-----FHKKNSNLKNALLNQK 175 +DL+ T + ++ L+ +GP+ S + + + FHKK ++ +L+Q Sbjct: 109 ----IDLIPTDEENEHSFLKKIGPDVLSESCSLDLIEERLTSTSFHKKKAS--TLMLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE---------IQKVLI 226 AG+GN E L+ AK+ P + L + T K I + + K L Sbjct: 163 FFAGLGNYLRSEILFDAKIHPDDRPFDLDKTKITQWAKSIKNISQLAYKTGGFTVSKSLA 222 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 D G R Y H +V+ + CL NC I R R YC Sbjct: 223 DRNKENGEPRRSYRH------------AVFMRHQYECL-NCKDRIERKWYGKRKVDYCPS 269 Query: 287 CQ 288 CQ Sbjct: 270 CQ 271 >gi|145225389|ref|YP_001136067.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145217875|gb|ABP47279.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 250 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 42/266 (15%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R ++R P + + G+ + +V R K+L I + G SI HL M G+++I Sbjct: 23 LTRCDIRV--PRYAAVDLSGQVVDEVLSRGKHLFIRV-GQASIHSHLKMDGAWVIGR--- 76 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 ++ P + + T N+ G +++++ + + + LGP+ Sbjct: 77 ---VRVPTYKIRIVLETANSRASGVD--------LGVLEVLDRATDMEA--VEHLGPDLL 123 Query: 148 DNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ++A + + L LL+Q+++AG+GN++ E + L P Sbjct: 124 GEDWSAEVAAANLVADPERPLAETLLDQRVMAGVGNVFANELSFVFGLRP---------- 173 Query: 207 NGTPKDIL---YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 GTP L ++ Q++L + LR G+ Q+ + VYG+ G PC Sbjct: 174 -GTPVGELTDPLRVANRAQQMLWL------NRLRVNRTTTGNTRPGQDVW-VYGRAGLPC 225 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG I R T++C CQ+ Sbjct: 226 -RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|256379789|ref|YP_003103449.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255924092|gb|ACU39603.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 265 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 47/279 (16%) Query: 22 TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFI 81 +T L R LR P +A G++++ V K+L G+LS+ H M G++ Sbjct: 17 ALTGRVLLRGQLRH--PRFATADLAGREVLGVRSVGKHLFTRFSGDLSLHSHFRMDGAWH 74 Query: 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR----FGFMDLVETSLKYQYP 137 + + + P H + R ++ P R F DL ++ Sbjct: 75 LYRPG--ERWRRPGH--------------QARAVFEVPDRQAIGFALHDLELLPTADEHR 118 Query: 138 PLRTLGPE----PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + LGP+ D + A + + L ALL+Q+++AG+GN+Y E + Sbjct: 119 LVGHLGPDLLADDWDEAAEAEAVRGLVAEPERELGLALLDQRVLAGVGNLYKAEVCFLLG 178 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 +SP ++ + ++ +++L+ ++ R GS+ Q + Sbjct: 179 VSPWSPVSAVDP---------VETVRLCRRLLL------ANAWRPEQSTTGSLRRGQQHW 223 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 V+ +TG PC + CG +R Q R ++C CQ Sbjct: 224 -VFERTGRPC-ARCGTRVRVGGQGAGVLERVAYWCPRCQ 260 >gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] Length = 1230 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 28/211 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ I L + T+ + ++ + F A GKKI+D ++ Sbjct: 1 MPEIAEISRIVHYLKRYVVGKTIGAVKTQEDDIIYGKVGTSASAFQKAMTGKKILDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSG--SFIIEHTSCAKPIKN------PQHNHVTISLTNNTN 108 KY + ++ ++H GMSG F + ++ +P K P++ + + + Sbjct: 61 GKYFWLVMDSQPHALMHFGMSGWMKFSNDDSAYYRPAKAEEEEWPPRYWKFVLEMKED-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNS 165 K V + DPRR + LV+ + PL+ GP+P D + + +K S Sbjct: 119 -PKIEVAFVDPRRLARIRLVDAKAEDMRNTTPLKENGPDPVLDKDVLTVEWLGKKLRKTS 177 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 N ++GIGN E +++AKL P Sbjct: 178 N----------ISGIGNWVGDEIMYQAKLHP 198 >gi|282866719|ref|ZP_06275759.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282558418|gb|EFB63980.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 269 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 19/250 (7%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 +A G+ + D K+L + +G + +HLG+ G P + V + Sbjct: 36 AARLDGRVLTDTDAHGKHLFLGFDGPEWVHIHLGLFGKL-----GFGTTPAPPPTDTVRL 90 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 L N ++ Y D R L+ K LGP+P + + Sbjct: 91 RLVNASD-------YADLRGPTTCALITEDEKRAIHA--RLGPDPLREDEDGERAWLRIS 141 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQ 219 + + L++QK+VAG+GN+Y E L+R + P R + L ++ + D+ + + Sbjct: 142 RSRVTVAALLMDQKVVAGVGNVYRAEVLFRHGIDPYRPGKDLTRSEWDAIWADLGALMRE 201 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 ++ ID + L + + + VY + + C C IR A R Sbjct: 202 GVRNNRIDTVRP--EHLPEAMGRPARVDDHGGEVYVYRRARQAC-HICATEIRTADLAAR 258 Query: 280 STFYCTYCQK 289 + F+C CQ+ Sbjct: 259 NLFWCPACQR 268 >gi|315042754|ref|XP_003170753.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] gi|311344542|gb|EFR03745.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] Length = 390 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 30/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T++ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTISKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---------LTNNT 107 KY + + ++H GM+G I + N + +V L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYY-RSNGKDENVEADVWPPKFWKFLLETD 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 N K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 120 NEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVRRK 179 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 180 KVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINY 233 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V ++D G S D+ + F + ++ GK G G+ I + GR++ Sbjct: 234 VCSVSVDLKGES-SDFP----TDWLFHHRWN-KGKKGAAGKLPSGEPIVFVTVGGRTSAV 287 Query: 284 CTYCQK 289 QK Sbjct: 288 VPSVQK 293 >gi|226227831|ref|YP_002761937.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] gi|226091022|dbj|BAH39467.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] Length = 295 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 41/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V I L + + + +H + SA ++I+ V R K + Sbjct: 1 MPELPDVMIYVERLEATVVGQAPSAVRVHNPFVLRSVTPPLSAFEH-REILGVRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFII----EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +++ +++VHL ++G + + + + + H T+ LT TK+ ++ Sbjct: 60 VLQFTEEFALVVHLMIAGRLRWRPPDKRIAGKLALASLEFAHGTLYLTE-AGTKRRASLH 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTL---GPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 P L++ G EP + L +N +K +L + Sbjct: 119 A---------------VQGVPSLQSFDRGGLEPLTCTVGE--LATVLRAENHTIKRSLTD 161 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAI-D 230 ++++GIGN Y E L A+LSP+ T L +DI L+ +Q + D + Sbjct: 162 PRLLSGIGNAYSDEMLHAAQLSPMVLTSRL-----GDEDIARLHAAMQHTLRTWTDRLRQ 216 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ + ++ F + +V+G+ G+ C C ++RI A T YC CQ Sbjct: 217 ETGNGFPE------TVTAFHDEMAVHGRFGKAC-PVCAAPVQRIRYADNETNYCARCQ 267 >gi|327295530|ref|XP_003232460.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] gi|326465632|gb|EGD91085.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] Length = 387 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/306 (22%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVSRIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---------LTNNT 107 KY + + ++H GM+G I + N + +V L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYY-RSNGKDENVEADVWPPKFWKFLLETD 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 N K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 120 NEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRRK 179 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 180 KVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINY 233 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V ++D G S D+ + F + ++ GK G G+ I + GR++ Sbjct: 234 VCSVSVDLKGES-SDFP----TDWLFHHRWN-KGKKGAAGKLPSGEPIVFVTVGGRTSAV 287 Query: 284 CTYCQK 289 QK Sbjct: 288 VPSVQK 293 >gi|220912909|ref|YP_002488218.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] gi|219859787|gb|ACL40129.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] Length = 317 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 120/325 (36%), Gaps = 50/325 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +RR T + + RF +A G ++ K+L + Sbjct: 1 MPEGHSVRRLARQFGDVFTGERLAVSSPQGRFS---GGAALLDGHTMVAAEAHGKHLFLH 57 Query: 64 LEGNLSIIVHLGMSG--SFIIEHT-SCAKPIKNPQHNHVTISLTNNTNTKKYR------- 113 + + VHLG+ G SF + T + + I P+ S + Y Sbjct: 58 FDNARVLHVHLGLYGAWSFGGDRTFTGSSSIGAPRRVGEQESPASGDADASYAGPPAPVG 117 Query: 114 -VIYNDPRRFGFMDL-----VETSLKYQYPP-LRTLGPEPADN-SFNAIYLTHQFHKKNS 165 V G+ DL ET + + L LGP+P N +A + Sbjct: 118 AVRVRLASGHGWADLRGATTCETITEAEVQAVLDRLGPDPLRNLRGDAGRFAANLAGRKP 177 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++QKI+AG+GN+Y E L+R +L P + KL +++ ++ Sbjct: 178 TIAALLMDQKIIAGVGNVYRAEVLFRQRLDP------YLPGGALSDAAARKLWRDVVNLM 231 Query: 226 IDAIDAG---GSSLRDYVHIDGSIGYFQNAFS-------------------VYGKTGEPC 263 D + G ++ + + +G G +NA VY + G PC Sbjct: 232 SDGVADGRIITTAAKYWTRRNGKTGRVRNADGTVSLPAKTASMPVRADAHYVYKRNGLPC 291 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 CG ++ GR+ ++C CQ Sbjct: 292 -RVCGTVVLAAELVGRNLYWCPVCQ 315 >gi|300780206|ref|ZP_07090062.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300534316|gb|EFK55375.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 267 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 46/258 (17%) Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 G ++ + K+L ++ + + +HLG+ GS E P ++ + + + Sbjct: 40 GSRLTRATAHGKHLFVDFDAPHVEHVVYIHLGLIGSLRFE------PAED-NWGQIRLHI 92 Query: 104 TNNTNTKKYR------VIYNDP-----RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 +N T R ++ +D R GF +VE + PP + Sbjct: 93 SNGTIAANLRGPQFCKLLTDDEVDAIIARSGFDPIVEAT-----PP-------------D 134 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR--SLIQNNGTP 210 A+Y + H+ ++ + L++QK+ AG+GNIY E L+R + P S Q + Sbjct: 135 ALYA--KIHRSKRSIGSLLMDQKLFAGVGNIYRAEVLFRQGIDPTVPGTLLSRAQFDAIW 192 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 D++ + + ID + + + + D VY + G+PC CG Sbjct: 193 TDLVELMAYGVDNGRIDTVRPDHTP--ETMGRDPRKDDHGGEVYVYRRAGDPCYI-CGTP 249 Query: 271 IRRIVQAGRSTFYCTYCQ 288 I V GR ++C CQ Sbjct: 250 IEMKVSEGRKLYWCPGCQ 267 >gi|88855146|ref|ZP_01129811.1| DNA glycosylase [marine actinobacterium PHSC20C1] gi|88815674|gb|EAR25531.1| DNA glycosylase [marine actinobacterium PHSC20C1] Length = 332 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 12/155 (7%) Query: 139 LRTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 L LGP+P +N KK + + L++Q +V+GIGN+Y E L+RA+L P Sbjct: 175 LNKLGPDPLVDENGEAEERFVATVRKKQTAIGLQLMDQSVVSGIGNVYRAEILFRARLDP 234 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS-- 254 + + + ++L +L ++ ++L + G + + D N Sbjct: 235 HTPGKLIAE------ELLRELWRDWARLLEIGVTTGQMMTMEGLTSDEYTAALANRADRH 288 Query: 255 -VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G PC CG I + A R ++C CQ Sbjct: 289 WVYHREGLPC-RVCGTNIVMELAASRKLYWCPNCQ 322 >gi|270296381|ref|ZP_06202581.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] gi|270273785|gb|EFA19647.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] Length = 277 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 39/301 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGEPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S I P + + ++ +++ + Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGDEI--PANYQLLLTFNDDS------FLV 108 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +GF+++ S + +Y L P + Y +F K + K L + Sbjct: 109 FTVAMYGFINVYPDSYIDNKYYKLSRESISPLSDK----YTEAEFEKLVAEAKKTLSAKA 164 Query: 176 IVA------GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ++A G+GN + L+ A+++P +K L N K++L+ ++E L+D Sbjct: 165 LLATNQRIPGVGNGVTQDILFNARINPKQKVLFLSDNQ---KEVLFNALKE---TLVDMT 218 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG + ++ G+ G ++ S KT + PCL CG I + G S +YC CQ Sbjct: 219 FEGGRDTQTDLY--GNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQ 273 Query: 289 K 289 + Sbjct: 274 Q 274 >gi|239931280|ref|ZP_04688233.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291439653|ref|ZP_06579043.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291342548|gb|EFE69504.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] Length = 278 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R ++ P R R Sbjct: 131 LGPDPLRPDADPAAAYRRIGRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHRIDPYRAGR 190 Query: 202 SLI--QNNGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 + + + D++ + + ++ ID + +A G R +D G Sbjct: 191 DITPAEWDAIWSDLVVLMREGVRTNRIDTVRPEHTPEAMGRPPR----VDDHGG----EV 242 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR A + F+C CQ Sbjct: 243 YVYRRAPLPC-HVCGGEIRTADLAACNLFWCPTCQ 276 >gi|145296990|ref|YP_001139811.1| hypothetical protein cgR_2889 [Corynebacterium glutamicum R] gi|140846910|dbj|BAF55909.1| hypothetical protein [Corynebacterium glutamicum R] Length = 269 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/297 (21%), Positives = 118/297 (39%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + K+ T + RF +A G +I K+L +E Sbjct: 1 MPEGHVIHRLAGELTKHFGETVLDATSPQGRFASE---AAIINGHRIAVAEAYGKHLFVE 57 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G+ E + + + L++ R P+ Sbjct: 58 FDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANLR----GPQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + Q + LG +P + + + + + ++ + L++QK+ AG+ Sbjct: 107 ---WCRLITDAERTQA--IGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGV 161 Query: 181 GNIYVCEALWRAKLSP--IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI------DAG 232 GNIY E L+R +SP I K + Q D++ + + ID + +A Sbjct: 162 GNIYRAETLFRLGISPFTIGKDITTAQFRSIWADLVGLMKDGVVAGRIDTVRPEHTPEAM 221 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G R H Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 222 GRPPRKDDH--------GGEVYTYRRTGQECFL-CETPIKEQVMEGRNLFWCPGCQR 269 >gi|326771864|ref|ZP_08231149.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326637997|gb|EGE38898.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 333 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 14/154 (9%) Query: 140 RTLGPEP--ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 R LGP+P AD A + +K+ + L++Q +++G GNIY E L+R +SP Sbjct: 187 RRLGPDPLRADGDVEAFVAKARSRRKS--IGELLMDQSVISGAGNIYRAETLFRVGVSPF 244 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFS 254 R + Q L + ++++ ++ + G L D + Sbjct: 245 RAGNRISQER------LRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLPPDDPEAGRWY 298 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY +TG PCL CG + A R F+C CQ Sbjct: 299 VYHRTGRPCL-RCGTPVAEREVASRRLFWCPTCQ 331 >gi|182438709|ref|YP_001826428.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467225|dbj|BAG21745.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 274 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHGIDPYRAGR 181 Query: 202 SLIQNN-GTPKDILYKLIQE-IQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 L + T L L++E ++ ID + +A G R H Sbjct: 182 DLTRATWDTIWADLGDLMREGVRNNRIDTVRPEHLPEAMGRPPRKDDH--------GGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 234 YVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|325108920|ref|YP_004269988.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] gi|324969188|gb|ADY59966.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] Length = 262 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/293 (21%), Positives = 109/293 (37%), Gaps = 40/293 (13%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATR--GKKIIDVSRRAKYLL 61 +PE +I R K+ + + RF A R GK++I + K+LL Sbjct: 1 MPEGHVIHRIAREQRKHFLQQPLAVSSPQGRFS-----KEARRLNGKQLIGIDAYGKHLL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +G + VHLG+ G F P+ P+ V + + T+ N P R Sbjct: 56 YRWQGGATFHVHLGLYGKFRTHEV----PLPEPR-GAVRLRIVGETHG----FDLNGPNR 106 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 V S + + L LG +P + + + + + LL+Q + AG+G Sbjct: 107 -----CVLISAEEEKKLLSRLGADPLREDADPSASFERIQRSRAAIGTLLLDQSLFAGVG 161 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI------QKVLIDAIDAGGSS 235 NI+ E L+ + P R S+ +++L Q+ Q ++ + G Sbjct: 162 NIFRSEVLYVLGIHPDRPGNSIETEQ---LQTMWELFQDWFEISAKQNRIVTTREPGSR- 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+ ++ E C CG+ +R R+ + C CQ Sbjct: 218 --------GSVSKLSREERLHIYKHENC-GKCGREVRSWSVGARTAYACESCQ 261 >gi|326779358|ref|ZP_08238623.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326659691|gb|EGE44537.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 274 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + + + + L++QK++AG+GN+Y E L+R + P R R Sbjct: 122 LGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNVYRAEVLFRHGIDPYRAGR 181 Query: 202 SLIQNN-GTPKDILYKLIQE-IQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQNAF 253 L + T L L++E ++ ID + +A G R H Sbjct: 182 DLTRATWDTIWADLGDLMREGVRNNRIDTVRPEHLPEAMGRPPRKDDH--------GGEV 233 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 234 YVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|289805554|ref|ZP_06536183.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 258 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 36/289 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ + + K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPQTTRILRVRLQTAD--KIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++++ +P L+ +GP+ D A L+ +F +N LL+Q Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+ L+ K + L N + L + +I ++ + G + Sbjct: 163 FLAGLGNYLRVEILWQVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQA 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + H G++ F+ F V+ + GE C CG +I + + R ++C Sbjct: 217 DENKHH--GAL--FR--FKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWC 258 >gi|309807130|ref|ZP_07701107.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] gi|308166481|gb|EFO68683.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] Length = 78 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 + +L +I + AI G++ ++ DG G +Q+ VYGK+GEPC S C + + Sbjct: 1 MVELFYDINNTIKIAIQYHGTTFHSFLDADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEK 59 Query: 274 IVQAGRSTFYCTYCQ 288 I GR T +C CQ Sbjct: 60 IKVNGRGTTFCPLCQ 74 >gi|160881513|ref|YP_001560481.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] gi|160430179|gb|ABX43742.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] Length = 273 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE ++ + + + + + ++ F + P ++ GK I+ Sbjct: 1 MLEIPESIVLSKEINESLVGKVIRYVKANQSPHSFAWYHGNPENYDELLSGKTIVKARPC 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L I+ + + I+ G S + + K P+ N + I +++ ++Y Sbjct: 61 GGMLEIKAD-DCKIVFTDGTSIRYYADRN------KAPKKNQLYIEFEDDSALVVTVMMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLNQ 174 G E K Y P P F+ Y + K NL K L + Sbjct: 114 G-----GIWAFAEGEFKNNYYQGAIDKPHPLSEEFDYTYFRSLYTDKCENLSAKAFLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+ + + P RK +++ + L I+ VL D ++ GG Sbjct: 169 QRIPGLGNGVLQDILFTSGIHPKRKMKNVEEEE------FLNLFSAIKSVLRDMVEGGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTG-EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I G G + S KT PC + CGQ IR+ G + ++C CQK Sbjct: 223 DTEK--DIFGEEGKYLTYLSR--KTYLTPC-TKCGQEIRKANYMGGTIYFCENCQK 273 >gi|300932502|ref|ZP_07147758.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 200 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 29/163 (17%) Query: 138 PLRTLGP---EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 PLR P E D F + + + + L++QK AG+GNIY E L+R + Sbjct: 54 PLRPADPLNLELRDEMFR------RLARSRRTIASLLMDQKFFAGVGNIYRAEVLFRLGI 107 Query: 195 SPIRKTRSLIQNNGTP---KDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGS 245 +P +TR + + +D++ + Q ID + +A G + R+ H G Sbjct: 108 NP--ETRGDVASERKEEIWEDLVRLMAYGEQHGRIDTVREQHQPEAMGRAPREDDH--GG 163 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y VY + G+PCL CG ++ V GR+ F+C CQ Sbjct: 164 EVY------VYRRAGQPCLV-CGDEVQHAVVEGRNLFWCPKCQ 199 >gi|262201979|ref|YP_003273187.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] gi|262085326|gb|ACY21294.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] Length = 267 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 52/235 (22%), Positives = 90/235 (38%), Gaps = 51/235 (21%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNP--------QHNHVTISLTNNTNTKKYRVIYNDPRR 121 I +HLG+ G+F T P+ +P + + + I L T + Y Sbjct: 67 IHIHLGLYGAF----TEAPVPMDDPVGQVRLRIESDEIGIDLRGPTACELY--------- 113 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G DL + LGP+P + + L++QK+VAG+G Sbjct: 114 -GPADLEALVAR--------LGPDPLRRDAKPVDAWTAIRSSRRPIGALLMDQKVVAGVG 164 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N+Y E L+RA + P+R + + D L+ + ++ ++ + R +H Sbjct: 165 NVYRAEVLFRAGIDPMRPGTIITRAE---FDGLWADLVDLMRIGV---------RRGRIH 212 Query: 242 I------DGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ Y + VY + GE C CG + R ++C CQ Sbjct: 213 VMRPDDDHGAPSYAPDRPRTYVYRRAGEAC-RICGTPVLIAELEARKLYWCPVCQ 266 >gi|304395701|ref|ZP_07377584.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] gi|304356995|gb|EFM21359.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] Length = 262 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 43/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ + L + +T+ F FP + + G+++ + R K Sbjct: 1 MPEGPEIRRVADKLEAAIVGEPLTEAW-------FAFPQLKTYEPSLIGEQVQAIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK-KYRVIYN 117 LL L++ H + G + I +K + T L TK K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRI--------VKPDTELNTTRQLRVRLATKGKAILLYS 105 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALL 172 ++L+ +P L +GP+ +++ L+ +F ++ LL Sbjct: 106 ASD----IELLNADTLAAHPFLTRIGPDVLNSALTVEEVRERLLSPRFRRRQ--FSGLLL 159 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN E LW A+L P + + L D L + + V A Sbjct: 160 DQAFLAGLGNYLRAEILWLAQLLPNHRAQDL------SDDQLTAFSEALLSVPRHAYRMR 213 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +++ Y H + + FQ F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 214 G-TMKKY-HEEAA---FQ--FEVFHRQGKQC-RRCGTVIEKGTLSSRPFYWCPGCQR 262 >gi|311743597|ref|ZP_07717403.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] gi|311312727|gb|EFQ82638.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] Length = 259 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 53/298 (17%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKYLL 61 +PE + + R + + + D+ + FD P ++ G ++ +V R K+LL Sbjct: 1 MPEGDTVWRTAHHLHEVLAGRDL------VTFDLRVPDFATSDLTGHRVDEVVSRGKHLL 54 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--VIYNDP 119 + G+ ++ HL M G++ ++ + P H+ + T Y V+ P Sbjct: 55 TRI-GSFTLHTHLKMEGAWHVQPRGAG--WRRPAHSARAVLETTEHQAIGYSLGVVELVP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVA 178 R D +T + + P L LGP+ ++A + + + ALL+Q+ +A Sbjct: 112 R-----DAEDTVVGHLGPDL--LGPD-----WDAAEAVRRLRTDPTRPVFLALLDQRNLA 159 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN YV E L+ A L+P R + L +L+ +++L D A R Sbjct: 160 GLGNEYVNELLFTAGLAPTRPVSDVPD--------LPRLVARGRQML-DVNKA-----RV 205 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--------RSTFYCTYCQ 288 GS Q + VY + PC CG RI Q R+TF+C +CQ Sbjct: 206 ERSFTGSTRPGQERW-VYSRERRPC-RRCGT---RISQGSLGDDPVRQRNTFWCPHCQ 258 >gi|289620160|emb|CBI53287.1| unnamed protein product [Sordaria macrospora] Length = 416 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 21/143 (14%) Query: 70 IIVHLGMSGSFIIEHTSCA--------KPIK----NPQHNHVTISLTNNTNTKKYRVIYN 117 +++H GM+G I+ A KP + P++ I + + Sbjct: 75 LVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIVTEEGDE-----MAFT 129 Query: 118 DPRRFGFMDLVETSLK--YQYPPLRTLGPEPADN--SFNAIYLTHQFHKKNSNLKNALLN 173 DPRRFG + V+ K +Y PL GP+P + F YL + + +K LL+ Sbjct: 130 DPRRFGRVRAVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLRERMKSRRVPIKALLLD 189 Query: 174 QKIVAGIGNIYVCEALWRAKLSP 196 Q +++GIGN E L++AKL P Sbjct: 190 QAVISGIGNWVADEVLYQAKLHP 212 >gi|320534790|ref|ZP_08035210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320132993|gb|EFW25521.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 138 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 12/145 (8%) Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 AD A + +K+ + L++Q ++AG GNIY E L+R +SP R Sbjct: 1 ADADVEAFVAKARSRRKS--IGELLMDQAVIAGAGNIYRAETLFRVGISPFRA------G 52 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVYGKTGEPC 263 N ++ L + ++++ ++ + G + D + + + VY +TG PC Sbjct: 53 NRISEERLRAIWEDLRPLMEYGVATGFITTVDLDDVPAPLPPDDPEAGRWYVYHRTGRPC 112 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 L CG + A R F+C CQ Sbjct: 113 L-RCGTPVAEREVASRRLFWCPTCQ 136 >gi|50120294|ref|YP_049461.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] gi|57012664|sp|Q6D7H0|END8_ERWCT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|49610820|emb|CAG74265.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] Length = 263 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 36/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ L+ + T+T + F FP + G+++ + R K Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVW-------FAFPELKPYETELVGQQVRQIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL + + H + G + + + + K L T+ ++ Sbjct: 54 ALLTYFSHDRVLYSHNQLYGVWRVVNAGESPETKR--------DLRIRLETQDRAILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQK 175 + L + +P L+ +GP+ D S + + LL+Q Sbjct: 106 ASDIEMLTLDTLT---AHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GN E LW+A+L+P L N L + + EI ++ + + G+ Sbjct: 163 FLAGLGNYLRVEILWQAQLAPQHTASQL---NEEQLQTLSRALLEIPRL---SYNTRGTV 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H G+I +F V+ + GE C CG I R + + R ++C +CQ Sbjct: 217 DENRHH--GAI----FSFKVFHREGESC-ERCGGTIERTMLSSRPFYWCPHCQ 262 >gi|124026034|ref|YP_001015150.1| endonuclease VIII [Prochlorococcus marinus str. NATL1A] gi|123961102|gb|ABM75885.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL1A] Length = 281 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/303 (23%), Positives = 122/303 (40%), Gaps = 47/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE I+R + K + +I N ++ + + I D++ R K + Sbjct: 1 MPEGPE---IKRAADRISKVLIGEEII--ESNFYYERIKEKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + S+ H + G + + + K + + T N + + + Sbjct: 56 IIRFKNDWSMYSHNQLYGRWTVNLNTT----KVKSRRALRVVFTTNKHAVRLWSATD--- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNS-----FNAIYLTHQFHKKNSNLKNALLNQK 175 +DL+ T+ + ++ L+ +GP+ + S + +FHKK ++ +L+Q Sbjct: 109 ----IDLIPTNEENEHSFLKKIGPDILNESCSLDLIEERLTSKRFHKKKAS--TLMLDQT 162 Query: 176 IVAGIGNIYVCEALWRAKLSP------IRKTRSLIQNNGTPKDI---LYKLIQ-EIQKVL 225 + AG+GN E L+ AK+ P + KTR + Q + K+I YK + K L Sbjct: 163 VFAGLGNYLRSEILFDAKIHPDDRPFDLDKTR-ITQWAKSIKNISQLAYKTGGFTVSKSL 221 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 D G R Y H +V+ + CL NC I R R YC Sbjct: 222 ADRNKENGEPRRSYRH------------AVFMRHQYECL-NCKDRIERKWYGKRKVDYCP 268 Query: 286 YCQ 288 CQ Sbjct: 269 SCQ 271 >gi|119504953|ref|ZP_01627030.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] gi|119459239|gb|EAW40337.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] Length = 279 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 64/294 (21%), Positives = 117/294 (39%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K+ + + L+ + +G I+ + R K L Sbjct: 1 MPEGPEIRRAADKIEAVLKDRVAEKVEFGLQPLK-----KYVKPLKGSNILALETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I H + G + + K K P+ N + N +D Sbjct: 56 LTHFDSGFTIYSHNQLYGVWRV-----VKRDKLPKTNRQLRLAIHTDNHSALLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + + +T ++P L+ +GP+ + + + + K L + L+Q + Sbjct: 109 ----ISVWKTQNIEEHPFLQRIGPDILNPDLSWRTVAERLQSKAFSGRALNSVYLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GN E L+ A ++P +K R L K + KL + +V + G +L Sbjct: 165 AGLGNYLRSEILFIAGINPAQKARDL------SKGQVGKLARTTLEVSQRSYALEGVTLP 218 Query: 237 -RDYVHI-DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R Y + + + Y + F V+G+ +PC C I+R R + C CQ Sbjct: 219 ERQYRTLKNQGVTYGKARFFVFGRARQPC-RVCKTKIQRSTANSRRIYTCATCQ 271 >gi|227548550|ref|ZP_03978599.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] gi|227079379|gb|EEI17342.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] Length = 264 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 17/158 (10%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 L G +P + + L + + + +++QK++AG+GNIY EAL+R +SP Sbjct: 115 LDRTGEDPLRDDASPDALFARVGASKRTIGSLMMDQKLLAGVGNIYRAEALFRQGISPFV 174 Query: 199 KTRSLIQN--NGTPKDILYKLIQEIQKVLIDAI------DAGGSSLRDYVHIDGSIGYFQ 250 L ++ + D++ + ++ ID + +A G R H Sbjct: 175 PGCQLERDAFDAVWADLVSLMRYGVEHGRIDTVRDEHTPEAMGRDPRKDDH--------G 226 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + GEPC CG+ I GR+ F+C CQ Sbjct: 227 GEVYVYRRAGEPCFV-CGEPIAVRKVEGRNLFWCPKCQ 263 >gi|262201744|ref|YP_003272952.1| formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085091|gb|ACY21059.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Gordonia bronchialis DSM 43247] Length = 261 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 47/269 (17%) Query: 34 RFDFPHHFSAATRGKKIIDVSRRAKYLLIEL---EGNL--SIIVHLGMSGSFIIEHTSCA 88 +F P + + G + V R K+LLI+L +GN SI HL M G++ + H A Sbjct: 27 QFRVPRYATVDFAGHTVTGVRSRGKHLLIDLADPQGNRAPSIHSHLKMEGAWHV-HRVGA 85 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPE 145 + + P H H I L +T Y + + G +DL++ +L Y LGP+ Sbjct: 86 R-WRRPGH-HARIVLRTST----YEAVGFE---LGILDLLDDPDAALSY-------LGPD 129 Query: 146 PADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + ++A + + + + ALL+Q+++AG+GN++ CE + + P + + Sbjct: 130 LLGDDWDAEEAIRRIRARPAEAIGLALLDQRLMAGVGNVFRCEICYLRGVLPT----TPV 185 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL 264 + P +++ +K+L + + R G + VYG+ G+ C Sbjct: 186 ADVDVP-----GMVETSRKLLWN------NRTRTARSTTGQTAPNARTW-VYGRRGQLC- 232 Query: 265 SNCGQMIRRIVQAGRST----FYCTYCQK 289 C +I R T ++C CQ+ Sbjct: 233 RRCATLIERGFLGDEGTERVIYFCPTCQR 261 >gi|302866006|ref|YP_003834643.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315502566|ref|YP_004081453.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|302568865|gb|ADL45067.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315409185|gb|ADU07302.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 273 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 17/148 (11%) Query: 142 LGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGP+ ++A + + + ALL+Q+ +AG+GN+Y CE L+ +SP Sbjct: 128 LGPDLLGPDWDADEAVRRLAADPDRTIGEALLDQRNLAGVGNLYKCEVLFLRGVSPWTPV 187 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 ++ GT + Q++L S +H G+ VYG+ Sbjct: 188 GAVPDLTGT--------VALAQRLLAANRGRWTQSTTGVLHRGGT-------SYVYGRRA 232 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +PC CG IR+ R T++C CQ Sbjct: 233 QPC-RRCGTAIRKEELGERVTYWCPACQ 259 >gi|297181460|gb|ADI17648.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium HF0130_20P23] Length = 261 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 37/248 (14%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+ I V K+LL + NL++ +HLG+ G I +H P++ P+ V + L Sbjct: 41 GQLCITVEAFGKHLLYRFDNNLALHIHLGLFGR-IRKHKL---PLQKPR-GAVRVRLIGR 95 Query: 107 TNTKKYRVIYNDPRRFGFMDL-VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 T+ V N P +D T+L + +GP+ + N + K Sbjct: 96 THA----VDINGPTICRVLDSNAVTTL------INRIGPDVLRSDSNPELAFAKITKSKV 145 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV- 224 + +++Q ++AGIGNIY E LWR + P R + N D L+ + + K+ Sbjct: 146 PIGQLIMDQSVMAGIGNIYRSEILWRQSVHPETPGREI---NRETFDQLWDEAKALLKIG 202 Query: 225 ----LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I +D S Y + +++ K P C IR +GR Sbjct: 203 VKHNAIITVDTAKPSKTRY----------KERVNIFAKDQCP---RCKNEIRCFEISGRR 249 Query: 281 TFYCTYCQ 288 F C CQ Sbjct: 250 AFVCDICQ 257 >gi|225682725|gb|EEH21009.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb03] Length = 392 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 28/233 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE--HTSCAK-PIKNPQHNHVTISLTNN------- 106 KY + + ++H GM+G ++ HT + P + ++ +N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 107 -TNTKKYRVIYNDPRRFGFMDLVE---TSLKYQYPPLRTLGPEP-ADNSFNAI-YLTHQF 160 + K + D RR G + LV+ T ++ +Y PL+ GP+P D + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIR-KYSPLKENGPDPIVDKDIVTLDWLRKKV 179 Query: 161 HKKNSNLKNALLNQKIVAGIGN-------IYVCEALWRAKLSPIRKTRSLIQN 206 K +K LL+Q ++GIGN I E L+ AK+ P + + +L ++ Sbjct: 180 LSKRVPIKALLLDQTNISGIGNWMGLASAIIRDEILYHAKIHPEQYSNTLQES 232 >gi|308186065|ref|YP_003930196.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] gi|308056575|gb|ADO08747.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] Length = 262 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 41/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ + L + +T+ F FP + + G+++ + R K Sbjct: 1 MPEGPEIRRVADKLEAAIVGQPLTEAW-------FAFPQLKTYEPSLIGEQVQAIETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL L++ H + G + I KP + + N K ++Y+ Sbjct: 54 ALLTHFSNGLTLYSHNQLYGVWRI-----VKP--DTELNTTRQLRVRLATAGKAILLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLKNALLN 173 ++L+ +P L +GP+ ++ N L+ +F ++ LL+ Sbjct: 107 SD----IELLNADTLAAHPFLTRIGPDVLNSQLNVEEVKERLLSPRFRRRQ--FSGLLLD 160 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AG+GN E LW A+L P + + L D L + + V A G Sbjct: 161 QAFLAGLGNYLRAEILWLAQLLPNHRAQDL------SDDQLTAFSEALLSVPRHAYRMRG 214 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++ Y H + + FQ F V+ + G+ C CG +I + + R ++C CQ Sbjct: 215 -TMKKY-HEEAA---FQ--FEVFHRQGKKC-RRCGTVIEKGTLSSRPFYWCPGCQ 261 >gi|326475689|gb|EGD99698.1| formamidopyrimidine-DNA glycosylase [Trichophyton tonsurans CBS 112818] Length = 388 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---------LTNNT 107 KY + + ++H GM+G I + N + +V L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYY-RSNGKDENVEADVWPPKFWKFLLETD 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 N K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 120 NEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRK 179 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 180 KVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINY 233 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V ++D G S D+ + F + ++ GK G G+ I + GR++ Sbjct: 234 VCSVSVDLKGES-SDFP----TDWLFHHRWN-KGKKGATGKLPSGEPIVFVTVGGRTSAV 287 Query: 284 CTYCQK 289 QK Sbjct: 288 VPSVQK 293 >gi|108761725|ref|YP_633136.1| formamidopyrimidine DNA-glyxosylase [Myxococcus xanthus DK 1622] gi|108465605|gb|ABF90790.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Myxococcus xanthus DK 1622] Length = 153 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 13/117 (11%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L Q +V +GN E+LW+A ++P R SL D + +L + IQ VL + + Sbjct: 35 LRQAVV--VGNRDADESLWQAGIAPRRLASSLT------ADEVVRLDRAIQAVLDEGLRM 86 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ RD + G + +N V+G+ G PC C + GR+T++C+ CQ Sbjct: 87 RGTQ-RDLFGVQGQAKHRRN---VFGRAGAPC-PRCATPVSHQRIGGRNTYWCSSCQ 138 >gi|326484609|gb|EGE08619.1| formamidopyrimidine-DNA glycosylase [Trichophyton equinum CBS 127.97] Length = 388 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---------LTNNT 107 KY + + ++H GM+G I + N + +V L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYY-RSNGKDENVEADVWPPKFWKFLLETD 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 N K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 120 NEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRK 179 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 180 KVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSINY 233 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V ++D G S D+ + F + ++ GK G G+ I + GR++ Sbjct: 234 VCSVSVDLKGES-SDFP----TDWLFHHRWN-KGKKGATGKLPSGEPIVFVTVGGRTSAV 287 Query: 284 CTYCQK 289 QK Sbjct: 288 VPSVQK 293 >gi|254552399|ref|ZP_05142846.1| endonuclease VIII nei [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 255 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 51/273 (18%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R ++R P + G+ + +V R K+L I G SI HL M GS+ + + Sbjct: 23 LTRCDIRV--PRFAAVDLTGEVVDEVISRGKHLFIR-TGTASIHSHLQMDGSWRVGN--- 76 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-----TSLKYQYPPLRTL 142 +P++ + I L N + RV+ D G +++++ + + P L Sbjct: 77 -RPVR--VDHRARIILEANQQEQAIRVVGVD---LGLLEVIDRHNDGAVVAHLGPDLLAD 130 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE------ALWRAKLSP 196 +P + N I + + ALL+Q+++AGIGN+Y E L A +S Sbjct: 131 DWDPQRAAANLIV------APDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPTAPVSA 184 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + R L+ +D+L+ + AG VY Sbjct: 185 VADPRRLVTR---ARDMLWVNRFRCNRCTTGDTRAG------------------RRLWVY 223 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G+ C CG +I R ++C CQ+ Sbjct: 224 GRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|296138322|ref|YP_003645565.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296026456|gb|ADG77226.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] Length = 261 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 111/296 (37%), Gaps = 46/296 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V+ +T L P + + G+ + DVS R K+L Sbjct: 1 MPEGDTLHNLAARLRPVLAGRVLTGCDLR-------VPRYATVDLTGRTVDDVSARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L++ HL M G + + + + P H + + + Sbjct: 54 LIA-AGDLTLHSHLKMEGQWHVYRPG--ERWRRPGHTARAVLAVDGAQVVGFS------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 GF++++ T+ L LGP+P ++ + + ALL+Q+ +AG Sbjct: 104 -LGFLEVLRTAAVDDA--LAHLGPDPLGPQWDPERAAENLAATPARPVGLALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P + + G D L G S+R Sbjct: 161 IGNVYRNELCFVRGVHPAMEVAACGDLRGWVDDAARLLRAN-----------AGRSVRVT 209 Query: 240 VHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIV-----QAGRSTFYCTYCQ 288 +D +N VY + PCL CG I +A R+ ++C CQ Sbjct: 210 TGVD------RNGLRAFVYDRARRPCL-RCGTAISAGSLGADGEAERTIWWCPRCQ 258 >gi|254503621|ref|ZP_05115772.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] gi|222439692|gb|EEE46371.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] Length = 168 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 15/149 (10%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 +GP+ + + + + K S++ L+NQ ++AGIGNIY E LWR + P R + Sbjct: 31 IGPDILRSDADPEKVFARISKSRSSIGKLLMNQAVLAGIGNIYRSEILWRQGIHPDRPGK 90 Query: 202 SLIQNNGTP--KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 L +++ D ++ L +++ I +D G ++ +++GK Sbjct: 91 DLSRDDFERLWADAVHLLEIGVKRNAIITVDEAAPGR----------GRYRERVNIFGKR 140 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 P C I ++ R ++C+ CQ Sbjct: 141 SCP---TCAGGITQVEIDTRKAYFCSTCQ 166 >gi|15610433|ref|NP_217814.1| endonuclease VIII [Mycobacterium tuberculosis H37Rv] gi|15842888|ref|NP_337925.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31794477|ref|NP_856970.1| endonuclease VIII [Mycobacterium bovis AF2122/97] gi|121639186|ref|YP_979410.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639220|ref|YP_979444.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663160|ref|YP_001284683.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148824499|ref|YP_001289253.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|167968929|ref|ZP_02551206.1| endonuclease VIII nei [Mycobacterium tuberculosis H37Ra] gi|215405310|ref|ZP_03417491.1| endonuclease VIII nei [Mycobacterium tuberculosis 02_1987] gi|215413175|ref|ZP_03421876.1| endonuclease VIII nei [Mycobacterium tuberculosis 94_M4241A] gi|215428783|ref|ZP_03426702.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|215447604|ref|ZP_03434356.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|218755079|ref|ZP_03533875.1| endonuclease VIII nei [Mycobacterium tuberculosis GM 1503] gi|219559358|ref|ZP_03538434.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|224991679|ref|YP_002646368.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253800340|ref|YP_003033341.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|254233906|ref|ZP_04927231.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|260188345|ref|ZP_05765819.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|260202459|ref|ZP_05769950.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|260206649|ref|ZP_05774140.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289444879|ref|ZP_06434623.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289448986|ref|ZP_06438730.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289555575|ref|ZP_06444785.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289571524|ref|ZP_06451751.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289576017|ref|ZP_06456244.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289747115|ref|ZP_06506493.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289751993|ref|ZP_06511371.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289759441|ref|ZP_06518819.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|289763485|ref|ZP_06522863.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|294993762|ref|ZP_06799453.1| endonuclease VIII nei [Mycobacterium tuberculosis 210] gi|297635951|ref|ZP_06953731.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] gi|297732948|ref|ZP_06962066.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN R506] gi|298526773|ref|ZP_07014182.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777626|ref|ZP_07415963.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|306782348|ref|ZP_07420685.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|306786170|ref|ZP_07424492.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|306790538|ref|ZP_07428860.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|306795059|ref|ZP_07433361.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|306799256|ref|ZP_07437558.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|306805105|ref|ZP_07441773.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|306809292|ref|ZP_07445960.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|306969394|ref|ZP_07482055.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|306973746|ref|ZP_07486407.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|307081456|ref|ZP_07490626.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|307086058|ref|ZP_07495171.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|313660280|ref|ZP_07817160.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN V2475] gi|54037059|sp|P64157|Y3325_MYCBO RecName: Full=Putative DNA glycosylase Mb3325; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb3325; Short=Putative AP lyase Mb3325 gi|54041001|sp|P64156|Y3297_MYCTU RecName: Full=Putative DNA glycosylase Rv3297/MT3396; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv3297/MT3396; Short=Putative AP lyase Rv3297/MT3396 gi|1877352|emb|CAB07061.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium tuberculosis H37Rv] gi|13883220|gb|AAK47739.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31620073|emb|CAD95417.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium bovis AF2122/97] gi|121494834|emb|CAL73315.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121494868|emb|CAL73351.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599435|gb|EAY58539.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|148507312|gb|ABQ75121.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148723026|gb|ABR07651.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|224774794|dbj|BAH27600.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253321843|gb|ACT26446.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|289417798|gb|EFD15038.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289421944|gb|EFD19145.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289440207|gb|EFD22700.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289540448|gb|EFD45026.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289545278|gb|EFD48926.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289687643|gb|EFD55131.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289692580|gb|EFD60009.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289710991|gb|EFD75007.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|289715005|gb|EFD79017.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|298496567|gb|EFI31861.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214047|gb|EFO73446.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|308325098|gb|EFP13949.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|308329319|gb|EFP18170.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|308333150|gb|EFP22001.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|308336837|gb|EFP25688.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|308340670|gb|EFP29521.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|308344404|gb|EFP33255.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|308348408|gb|EFP37259.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|308353245|gb|EFP42096.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|308356985|gb|EFP45836.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|308360841|gb|EFP49692.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|308364526|gb|EFP53377.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|323718166|gb|EGB27348.1| endonuclease VIII nei [Mycobacterium tuberculosis CDC1551A] gi|326902475|gb|EGE49408.1| endonuclease VIII nei [Mycobacterium tuberculosis W-148] gi|328460074|gb|AEB05497.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] Length = 255 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 51/273 (18%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 L R ++R P + G+ + +V R K+L I G SI HL M GS+ + + Sbjct: 23 LTRCDIRV--PRFAAVDLTGEVVDEVISRGKHLFIR-TGTASIHSHLQMDGSWRVGN--- 76 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-----TSLKYQYPPLRTL 142 +P++ + I L N + RV+ D G +++++ + + P L Sbjct: 77 -RPVR--VDHRARIILEANQQEQAIRVVGVD---LGLLEVIDRHNDGAVVAHLGPDLLAD 130 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE------ALWRAKLSP 196 +P + N I + + ALL+Q+++AGIGN+Y E L A +S Sbjct: 131 DWDPQRAAANLIV------APDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPTAPVSA 184 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + R L+ +D+L+ + AG VY Sbjct: 185 VADPRRLVTR---ARDMLWVNRFRWNRCTTGDTRAG------------------RRLWVY 223 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G+ C CG +I R ++C CQ+ Sbjct: 224 GRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|312140746|ref|YP_004008082.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325675614|ref|ZP_08155298.1| endonuclease VIII [Rhodococcus equi ATCC 33707] gi|311890085|emb|CBH49403.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325553585|gb|EGD23263.1| endonuclease VIII [Rhodococcus equi ATCC 33707] Length = 265 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 116/296 (39%), Gaps = 46/296 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T+ + P + + G+ + V R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGRVLTECDIR-------VPRYATVDLSGEAVDAVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G +I HL M GS+ + + A+ + P H + T +T + Sbjct: 54 LTRI-GAHTIHTHLKMEGSWQV-YPRGAR-WRRPAHQARIVLGTEDTVAVGFS------- 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 G ++V+ S + + LGP+ ++A T + ALL+Q+I+AG Sbjct: 104 -LGITEVVDRSDEESV--VGHLGPDLLGADWDAAVATSNLVAAGERPIGEALLDQRIMAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P T + L K++ +VL + RD Sbjct: 161 IGNVYRNEICFLRGVDPRTPTARVPD--------LPKVVDLAHRVL--------RANRDR 204 Query: 240 -VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTFYCTYCQ 288 V + VYG+ G+PCL CG I + G RS F+C CQ Sbjct: 205 PVRVTTGDRRPGRRDWVYGRGGKPCL-RCGTPI-AAAEFGEEPGRERSIFWCPNCQ 258 >gi|281343397|gb|EFB18981.1| hypothetical protein PANDA_014616 [Ailuropoda melanoleuca] Length = 384 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 42/220 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + + V C+ + + + F ++ I S R K L Sbjct: 1 MPEGPELHLASRFVNEACRGL-VFGGCVEKSPVSRNPEVPFESSA---YCISSSARGKEL 56 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L G L+++ GMSGSF + P H H + + Sbjct: 57 RLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDAL-----PAHAH--LRFYTAPPGPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPP----LRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + D RRFG DL +L + QY P LR L AD F+ Sbjct: 110 LALCFVDIRRFGRWDLGGEALPPQCQYSPRENVLRNL----ADKVFD------------Q 153 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R ++ P K R +++ Sbjct: 154 PICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLE 193 >gi|238063417|ref|ZP_04608126.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885228|gb|EEP74056.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 273 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 16/125 (12%) Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + + ALL+Q+ +AG+GN+Y CE L+ +SP ++ GT + Q+ Sbjct: 157 EATIGEALLDQRNLAGVGNLYKCEVLFLRGVSPWTPVGAVSDLAGT--------VALAQR 208 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L A + G R GS+ + ++ VYG+ +PC CG IR+ R T++ Sbjct: 209 LL--AANRG----RWTQSTTGSLRRGETSY-VYGRRAQPC-RRCGTAIRKQELGERVTYW 260 Query: 284 CTYCQ 288 C CQ Sbjct: 261 CPICQ 265 >gi|172041310|ref|YP_001801024.1| hypothetical protein cur_1630 [Corynebacterium urealyticum DSM 7109] gi|171852614|emb|CAQ05590.1| hypothetical protein cu1630 [Corynebacterium urealyticum DSM 7109] Length = 300 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 31/238 (13%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 I +HLG+ G+ IE + ++P + H H + + + R + L+ Sbjct: 72 IHIHLGLIGTLAIEPFTGSQPRGQVRLHLHRIDAEGGEDMCTWGNAVEANLRGPQWCRLI 131 Query: 129 ETS------LKYQYPPLRTLGP--EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 K PLR+ P +P +N+ L + ++ + L++Q AG+ Sbjct: 132 TDEEMDAAVAKLGADPLRSTDPVVDP-ENAAKLPELDQFLCRSRRSIGSILMDQARYAGV 190 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-DY 239 GNIY E L+R + P R+ D+ + + I + L++ + G +S R D Sbjct: 191 GNIYRAETLFRLGIHP--DVRAC--------DLAAEERESIWQDLVELMAEGEASGRIDT 240 Query: 240 V---HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V H ++G VY + G+PC CG+ IR V GR+ F+C CQ Sbjct: 241 VRPEHTPEAMGRAPRKDDHGGEVYVYRRAGQPCYV-CGEEIRHRVVEGRNLFWCPGCQ 297 >gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] Length = 390 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 20/188 (10%) Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 T K V + DPRRFG + LV+ ++ PL GP+P ++ F Y+ + + Sbjct: 95 GTPKVEVAFTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSR 154 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q ++GIGN E L++A + P + + + ++++ Sbjct: 155 HVPIKALLLDQTHISGIGNWVADEVLYQANVHPEQYCDDFSDRE------IKAIYEKVRY 208 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--GQMIRRIVQAGRST 281 V A+D G S D D Y +GK G+ +S G+ + I GR++ Sbjct: 209 VCQTAVDKLGDS--DEFPEDWLFKYR------WGKGGKDAVSKLPNGEKLAFITVGGRTS 260 Query: 282 FYCTYCQK 289 Y QK Sbjct: 261 CYAPSRQK 268 >gi|297520507|ref|ZP_06938893.1| endonuclease VIII [Escherichia coli OP50] Length = 197 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%) Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 +P L+ +GP+ D + + + +N LL+Q +AG+GN E LW+ Sbjct: 54 HPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQV 113 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 L+ K + L N D L + EI + + R V + G Sbjct: 114 GLTGNHKAKDL---NAAQLDALAHALLEIPRF--------SYATRGQVDENKHHGALFR- 161 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + GEPC CG +I + + R ++C CQ Sbjct: 162 FKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 196 >gi|325963651|ref|YP_004241557.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469738|gb|ADX73423.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 322 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 28/172 (16%) Query: 139 LRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L LGP+P N +A + + L L++QKI+AG+GN+Y E L+R +L P Sbjct: 157 LARLGPDPLRNLRGDAGRFAANLQGRKAPLAALLMDQKIIAGVGNVYRAEVLFRRRLDP- 215 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIGYF------ 249 + + P+ +L +++ V+ D + G ++ Y G Sbjct: 216 -----WLPGSDVPEPAARRLWRDVVSVMNDGVSDGRIITTPPKYWSDHGKAAGRAGAARA 270 Query: 250 ------------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 NA VY + G PC C + GR ++C CQ+ Sbjct: 271 AALPKSETYPARDNAHFVYKRDGLPC-RVCRTTVLMSELVGRKLYWCPSCQQ 321 >gi|149923089|ref|ZP_01911505.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] gi|149816065|gb|EDM75577.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] Length = 292 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 14/125 (11%) Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 L +A++ Q++VAGIGN Y E L+ L P +L + + + E L Sbjct: 178 ELGDAVMRQRVVAGIGNEYKSELLFLEGLDPFAPLAAL-------DEAARRSLLERAAAL 230 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFY 283 + A A G+ R +D G VY ++G PC CG+++ RR RST++ Sbjct: 231 MRANLASGAPRRTRFALDDPHGRGW----VYERSGRPC-RVCGELVCMRRQGALARSTYF 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|229821095|ref|YP_002882621.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229567008|gb|ACQ80859.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 307 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 11/148 (7%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + S + L +Q ++AGIGNI+ E L+R+++ P R Sbjct: 169 LGPDPLRPDADREVYVRAVRSSPSPVGVLLTDQTVIAGIGNIFRAELLFRSRIYPRRPGA 228 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 + L ++ E +++ A D+G D + + VY + G+ Sbjct: 229 RVSAVK------LRRVWDEAVELMSAAADSGRIVTTDAADRTAA----DERWYVYHRDGQ 278 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 CL CG +R A R ++C CQ+ Sbjct: 279 DCL-RCGWTVRAYELATRRVYWCPNCQR 305 >gi|226305585|ref|YP_002765545.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226184702|dbj|BAH32806.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 263 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 99/257 (38%), Gaps = 35/257 (13%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P + + G ++ V+ R K+LLI + G SI HL M G + I + + P H Sbjct: 31 PRYATVDLSGHRVDSVASRGKHLLIRV-GEASIHTHLKMEGQWQIYRP--GERWRRPAHQ 87 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 I T ++ + G +++E L + + LGP+ +++ Sbjct: 88 ARIILATEDSVAVGFS--------LGVTEILE--LGQEQEAVGHLGPDLLGTDWDSSVAA 137 Query: 158 HQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 +S + ALL+Q+++AG+GN+Y E + + P T N D+ ++ Sbjct: 138 RNLRAADSVPIGIALLDQRVMAGLGNVYRNEICFLRGIHPKTPTHR-AGNLDAIVDLSFR 196 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 I + I R VYG+ G+PC CG IR Sbjct: 197 TINVNKSRRIRVTTGDTRPGRQTW--------------VYGRRGKPC-RRCGTRIREDTL 241 Query: 277 A-----GRSTFYCTYCQ 288 R+ F+C CQ Sbjct: 242 GPDQLTERNIFFCPACQ 258 >gi|213028695|ref|ZP_03343142.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 162 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 20/159 (12%) Query: 136 YPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 +P L+ +GP+ D A L+ +F +N LL+Q +AG+GN E LW Sbjct: 19 HPFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQSFLAGLGNYLRVEILW 76 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 + L+ K + L N + L + +I ++ + G + + H G++ F+ Sbjct: 77 QVGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQADENKHH--GALFRFK 128 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ + GE C CG +I + + R ++C +CQK Sbjct: 129 ----VFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 162 >gi|76664749|emb|CAJ17813.1| formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma solani] Length = 98 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 9/103 (8%) Query: 188 ALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 L+ AKL P K +L IQ T I +KVL AI GG+++ Y G Sbjct: 1 VLFLAKLHPETKACTLNIQQAQTILTI-------SKKVLKTAIQLGGTTISTYESQQGIQ 53 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN+ V+ K C NC I +I GR T++C CQK Sbjct: 54 GTFQNSLLVHSKQNYLCF-NCKTKIIKIKVGGRGTYFCPSCQK 95 >gi|323356901|ref|YP_004223297.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273272|dbj|BAJ73417.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 277 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 37/251 (14%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G++I+ K+LL + ++ HL M GS+ I A P + V + L + Sbjct: 40 GRRIVGYDTHGKHLLTRFDDGTTLHTHLRMQGSWAITRAGRALPTPVREKARVRLRLDDG 99 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 R ++ ++LV T + + LGP+P ++A + + Sbjct: 100 ------REVWG--LDLPVVELVPTPRERDV--IGHLGPDPLREDWDAADAVRRLSSRPER 149 Query: 167 -LKNALLNQKIVAGIGNIYVCE-ALWRA--KLSPIRKTRSLIQNNGTPKDI-LYKLIQEI 221 ALL+Q +AG+GN++V E A R +PI T + + + + + Sbjct: 150 AFVAALLDQTRIAGLGNLWVNELAFLRGIHPFAPIGTTDLDALAALAARCLRISATVPRM 209 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--- 278 +V G R H V G+ G PCL +++ R AG Sbjct: 210 YQVTT------GDRRRGSSHW------------VAGRAGRPCLRCGTRILVREEVAGDPE 251 Query: 279 -RSTFYCTYCQ 288 R T++C CQ Sbjct: 252 QRRTWWCPLCQ 262 >gi|308176221|ref|YP_003915627.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307743684|emb|CBT74656.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 274 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 23/154 (14%) Query: 142 LGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 LGP+ ++A + L + + + ALL+Q+I+AG+GN+Y E L+ +++ P+ Sbjct: 134 LGPDLLGVDWDAQVALENLRAEPQLGIGQALLDQRIMAGVGNVYRSEILFLSRVHPLTAV 193 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 R +QN D+ ++L+ + K + G RD VYG+ Sbjct: 194 RE-VQNLPALIDLAHRLLV-VNKDRPRRVTTGQPGTRD-------------PLWVYGRAA 238 Query: 261 EPCLSNCGQMIRRIVQAG------RSTFYCTYCQ 288 +PCL CG I + A R + C CQ Sbjct: 239 KPCL-RCGTRIELLRIASTPTGIERDCYLCPSCQ 271 >gi|326330079|ref|ZP_08196392.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] gi|325952124|gb|EGD44151.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] Length = 250 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 108/284 (38%), Gaps = 53/284 (18%) Query: 17 VMKNMTVTDICLHRKNL-RFDF--PHHFSAATRGKKIIDVSRRAKYLLIELE---GNLSI 70 V++ D L R+ L R DF P +A G ++ + R K+LL ++ G ++ Sbjct: 7 VLRTARSLDKGLARQVLTRTDFRVPQLATADLSGGTVLGTATRGKHLLTRIDHRTGEWTL 66 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET 130 HL M GS+ I P P + T T + G ++LV Sbjct: 67 HTHLKMEGSWRILEAGRRWP--KPGFQARVVLRTERTEAVGFL--------LGIVELVPR 116 Query: 131 SLKYQYPPLRTLGPE-PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + Q + LGP+ AD+ L + L AL +Q +AGIG IY E Sbjct: 117 DQEEQL--VAHLGPDILADDWDPDTALQRLRDQPERPLFEALRDQTNLAGIGTIYAAETC 174 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 + A ++P+R ++ G D L +++Q RD + D S Sbjct: 175 FIAGINPLRT----VEEAG---DRLPRILQRT---------------RDLMQADWS---R 209 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 VYG+ CG + + + G R +YC CQ Sbjct: 210 SRQMWVYGRR---ACRRCGGTV-TVAKVGPPGKERPAYYCARCQ 249 >gi|325066953|ref|ZP_08125626.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Actinomyces oris K20] Length = 139 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 AD A + +K+ + L++Q +++G GNIY E L+R +SP R Sbjct: 2 ADGDVEAFVAKARSRRKS--IGELLMDQAVISGAGNIYRAETLFRVGVSPFRA------G 53 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 N T ++ L + ++++ ++ + G L D + VY +TG PC Sbjct: 54 NRTSEERLRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLPPDDPEAGRWYVYHRTGRPC 113 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 L CG + A R F+C CQ Sbjct: 114 L-RCGTPVAEREVASRRLFWCPTCQ 137 >gi|301309603|ref|ZP_07215545.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] gi|300832692|gb|EFK63320.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] Length = 277 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G++G ++ S +PC CG+ I++ G S +YC +CQ Sbjct: 223 DTEKDLY--GALGNYRTILSK-NTYHDPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|256841344|ref|ZP_05546851.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] gi|256737187|gb|EEU50514.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] Length = 275 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/295 (20%), Positives = 119/295 (40%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTCRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G++G ++ S +PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTEKDLY--GALGNYRTILSK-NTYHDPC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|71043710|ref|NP_001020925.1| endonuclease VIII-like 1 [Rattus norvegicus] gi|68533825|gb|AAH99125.1| Nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] gi|149041762|gb|EDL95603.1| nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] Length = 387 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + K + V C+ + +N F +H SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEICKGL-VFGGCVEKSSVSRNPEVPFESSAYHISALARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G+ LS++ GMSGSF + P+H H + Sbjct: 57 ----RLTLSPLPGSHPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG D ++ P R GP + L ++ ++N Sbjct: 106 PAPRLALCFVDIRRFGHWD-----PGGEWQPGR--GP--------CVLLEYERFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 151 NLSDKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 199 >gi|262197858|ref|YP_003269067.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] gi|262081205|gb|ACY17174.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] Length = 300 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 61/309 (19%), Positives = 118/309 (38%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+L + +T + + + RG + K+L Sbjct: 1 MPEGDSIHKVARHLRAALGGAIITGVHVRDRGELMSL--------RGCSAEGIEAVGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT-ISLTNNTNTKKYRVIYNDP 119 L+ G + VHLGM G + + ++N SL T + V + Sbjct: 53 LLRFTGGTGVRVHLGMKGRWRRFDAGDDETLENRWSRFGNRASLVLATRAAAF-VCFEAA 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPE-----------------PADNSFNAIYLTHQF-H 161 + ++++E ++ LGP+ +++ I + Sbjct: 112 Q----VEVIEALATRGSRHVQRLGPDLLAIGGEAKGAAGGDGDADASAYAEILRRARVPW 167 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +++ + LL+Q + +GIGN+Y E L+ ++ P ++ +L D L L +E Sbjct: 168 RRSQAVAELLLDQSVASGIGNVYKSEVLFVCRVHPWQRVDAL------EDDALLALYREA 221 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GR 279 +++ + + G + VYG+ +PC+ CG +IR Q R Sbjct: 222 ARLMRANLPLARRATVAPERRGKGGGDLLPRYWVYGRHRKPCM-RCGAIIRVARQGDQAR 280 Query: 280 STFYCTYCQ 288 ST++C CQ Sbjct: 281 STYWCPRCQ 289 >gi|150008625|ref|YP_001303368.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] gi|149937049|gb|ABR43746.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] Length = 277 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDIFMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKTYFISLIGNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G++G ++ S +PC CG+ I++ G S +YC +CQ Sbjct: 223 DTEKDLY--GALGNYRTILSK-NTYHDPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|12850615|dbj|BAB28790.1| unnamed protein product [Mus musculus] Length = 354 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + K + V C+ + +N F +H SA RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGL-VFGGCVEKSSVSRNPEVPFESSAYHISALARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G+ LS++ GMSGSF + P+H H + Sbjct: 57 ----RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG D ++ P R GP + L ++ ++N Sbjct: 106 PAPRLALCFVDIRRFGHWD-----PGGEWQPGR--GP--------CVLLEYERFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 151 NLSDKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 199 >gi|116669188|ref|YP_830121.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116609297|gb|ABK02021.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 279 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 37/268 (13%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIELEG----NLSIIVHLGMSGSFIIEHTSCAKP 90 F P + G + +V R K+L + L G L+I HL M G++ + Sbjct: 28 FRVPRFATLKLAGWTVDEVVPRGKHLFMRLRGPAEERLTIHSHLKMEGAWQVYPPGGR-- 85 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 + P + T + + G +++V T+ + + LGP+ Sbjct: 86 WRKPGFTARCVLRTATADAVGFS--------LGILEVVRTADEDSV--VGHLGPDLLGPD 135 Query: 151 FNAIYLTHQFHKK-NSNLKNALLNQKIVAGIGNIYVCEALWRAKL---SPIRKTRSLIQN 206 ++ + + + ALL+Q+ +AGIGNIY CEA + + + +P+ + L Sbjct: 136 WDMAEAERRLRAAPDVPIGVALLDQRNLAGIGNIYRCEACFLSGIHPAAPVSEVTDLAAM 195 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 T K +L + ++ + ++ G + + G GY+ VY + +PCL Sbjct: 196 MTTAKQLLEANLGPGRRTTV--LNPRGMPVG---RMAGRPGYW-----VYRREHQPCL-K 244 Query: 267 CGQMIRRIVQAG------RSTFYCTYCQ 288 CG IR V A R ++C CQ Sbjct: 245 CGTPIRHGVLAKGAGTEERDIYFCPSCQ 272 >gi|148693942|gb|EDL25889.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_b [Mus musculus] Length = 266 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + K + V C+ + +N F +H SA RGK++ Sbjct: 14 MPEGPELHLASHFVNETCKGL-VFGGCVEKSSVSRNPEVPFESSAYHISALARGKEL--- 69 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G+ LS++ GMSGSF + P+H H + Sbjct: 70 ----RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAH--LRFYTAP 118 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG D ++ P R GP + L ++ ++N Sbjct: 119 PAPRLALCFVDIRRFGHWD-----PGGEWQPGR--GP--------CVLLEYERFRENVLR 163 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 164 NLSDKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 212 >gi|262383499|ref|ZP_06076635.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] gi|262294397|gb|EEY82329.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] Length = 275 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQARETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDTD------RLFNTVKSTLKEMTRQGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G++G ++ S PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTEKDLY--GALGNYRTILSK-NTYHAPC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|255077513|ref|XP_002502394.1| DNA glycosylase [Micromonas sp. RCC299] gi|226517659|gb|ACO63652.1| DNA glycosylase [Micromonas sp. RCC299] Length = 447 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 30/246 (12%) Query: 48 KKIIDVSRRAKYLLIELEGNLSII--VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 K++ + + Y E +G + + VH GMSG F HT + P+ T Sbjct: 45 KRVDAIGKNLFYFFNEADGPDAHVMHVHFGMSGRFSTHHT-----LPGPEPGATTRLRLE 99 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + ++ G + L +T LG +P +A L +F + Sbjct: 100 SREHGICALLSAMTVELGDISLFQTKRA-------KLGEDPLREDADADRLWEKFTRSRK 152 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++ AL++Q + AG+GNIY E L++A + P + D+ E+ + Sbjct: 153 SVGLALMDQAMFAGVGNIYRAEILYKAGVHPEQPC----------ADLPRPAFDEVWRHS 202 Query: 226 IDAIDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++ + G GS L ++G VY + CG ++ A R+ + Sbjct: 203 VELLQRGFVTGSILTVDPDEAKTLGEPWTRRYVYNQR---SCGRCGSAVKTWDMAARTVY 259 Query: 283 YCTYCQ 288 C CQ Sbjct: 260 CCEVCQ 265 >gi|163838843|ref|YP_001623248.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952319|gb|ABY21834.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 188 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 27/171 (15%) Query: 122 FGFMDLV---ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIV 177 GF+ +V E L Y P L LGP+ +N + ++ + + ALL+Q+ + Sbjct: 37 LGFVHVVKPDELDLDYLGPDL--LGPD-----WNPLEARNRLSAQLGRPIGLALLDQRNL 89 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E + P+ + K L +++ E+ K L++A + R Sbjct: 90 AGIGNIYRNELCFLIGAHPL---------SAVEKVDLGRVV-ELAKRLLEA-----NKNR 134 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G NA VYG+ +PC CG +IR GR ++C CQ Sbjct: 135 KQRSTTGGPARADNASWVYGRARQPC-RRCGSLIREDELEGRVIYFCPRCQ 184 >gi|298376079|ref|ZP_06986035.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] gi|298267116|gb|EFI08773.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] Length = 275 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDSLFNTVKSTLEEMTCRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G++G ++ S +PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTEKDLY--GALGNYRTILSK-NTYHDPC-PVCGERIQKEAYLGGSIYYCPHCQR 273 >gi|319778283|ref|YP_004129196.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] gi|317108307|gb|ADU91053.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] Length = 317 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 71/328 (21%), Positives = 128/328 (39%), Gaps = 83/328 (25%) Query: 1 MPELPEVEIIRRNLM-MVMKNMTVTDICLHRKNLRFDFPHHFSAAT-------------- 45 MPELPEVE+ +++L M++++ T+ K L + F+A T Sbjct: 1 MPELPEVEVTKQDLYSMILESEVGTESKTIAKVLPYT-KEFFTAKTNPRNNKKDFLAQIL 59 Query: 46 ---------RGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSF--IIEHTSCAKPIKN- 93 KI + R AKY++I + +L ++HLGMS + II + K I++ Sbjct: 60 KYDDRRKELENSKITSIYRIAKYIIISTDASLHFVIHLGMSATVYSIIATPNDRKLIESG 119 Query: 94 -----------------PQHNHVTISLTNNTNTKKYRV-IYNDPRRFGFMDLVETSLKYQ 135 +H+H L K R+ +++D RRFG ++ + Sbjct: 120 GGLEFLDFLNSSTDRVFARHHHTGFLL------KDGRIFLFHDVRRFGEWAVLTDDELNK 173 Query: 136 YPPLRTLGPEPADNSFNAIYL-----------THQFHKKNSNLKNALLNQKIVAGIGNIY 184 + +P ++F++ L T ++++ N L + + + G G IY Sbjct: 174 FKDGFGSSWDPHLSNFDSKSLIEFINNHPQKTTRKWNQSNMGLLSFIGKSGAIKGCGAIY 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR------- 237 E ++ + L P SL + + L +Q VL ++I GG++ Sbjct: 234 SREVVFASGLDPSTPISSLKEYD------WINLANSMQTVLSESISDGGTAFNSKDTDDA 287 Query: 238 -------DYVHIDGSIGYFQNAFSVYGK 258 D+V G + +Q Y K Sbjct: 288 DSVRSRGDFVRPSGQLSRYQEKLKSYKK 315 >gi|27696577|gb|AAH43297.1| Neil1 protein [Mus musculus] Length = 253 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + K + V C+ + +N F +H SA RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGL-VFGGCVEKSSVSRNPEVPFESSAYHISALARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G+ LS++ GMSGSF + P+H H + Sbjct: 57 ----RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG D ++ P R GP + L ++ ++N Sbjct: 106 PAPRLALCFVDIRRFGHWD-----PGGEWQPGR--GP--------CVLLEYERFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 151 NLSDKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 199 >gi|126667129|ref|ZP_01738104.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] gi|126628535|gb|EAZ99157.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] Length = 269 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 103/269 (38%), Gaps = 37/269 (13%) Query: 35 FDFPHHFSAATRGKKIIDVSRRAKYLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAK 89 FD F G+ + V R K +L+ +G + H + G + I A+ Sbjct: 21 FDRFKSFEPTLAGRLVTAVEARGKAVLVFFSALADDGPWCVYSHNQLYGQWRISKAD-AQ 79 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P Q I +N + +D R LV Q L LGP+P + Sbjct: 80 PKTGRQLRFAVI----GSNKAAWLYSASDIR------LVRPDDLEQVVYLARLGPDPVNQ 129 Query: 150 SFNAIYLTHQFHKKN---SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + + + QF K L LL+Q VAG+GN E L+ A L P K Sbjct: 130 TISVENVLAQFDDKRFRGRGLGGLLLDQGFVAGVGNYLRSEILFEAGLMPSVK------- 182 Query: 207 NGTPKDILYKLIQEIQKVLIDAID-----AGGSSLRDYVHIDGSIG--YFQNAFSVYGKT 259 PKD+ + + + K ++ I+ G ++ + V G + Q F V+ + Sbjct: 183 ---PKDMSSEARERLAKAILVLIERTYRLKGITNDPERVKRLKREGRTFSQRRFMVFNRD 239 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 EPC C I +I A R +YC CQ Sbjct: 240 SEPCY-ECETPIVKISVASRRLYYCPLCQ 267 >gi|213584692|ref|ZP_03366518.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 143 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 20/158 (12%) Query: 137 PPLRTLGPEPAD-----NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 P L+ +GP+ D A L+ +F +N LL+Q +AG+GN E LW+ Sbjct: 1 PFLQRVGPDVLDARLTPEEVKARLLSPRF--RNRQFSGLLLDQSFLAGLGNYLRVEILWQ 58 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 L+ K + L N + L + +I ++ + G + + H G++ F+ Sbjct: 59 VGLTGQHKAKDL---NEAQLNALSHALLDIPRL---SYTTRGQADENKHH--GALFRFK- 109 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ + GE C CG +I + + R ++C +CQK Sbjct: 110 ---VFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 143 >gi|22094129|ref|NP_082623.1| endonuclease 8-like 1 [Mus musculus] gi|56404617|sp|Q8K4Q6|NEIL1_MOUSE RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|22004055|dbj|BAC06477.1| endonuclease VIII [Mus musculus] gi|148693941|gb|EDL25888.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Mus musculus] Length = 389 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + K + V C+ + +N F +H SA RGK++ Sbjct: 1 MPEGPELHLASHFVNETCKGL-VFGGCVEKSSVSRNPEVPFESSAYHISALARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G+ LS++ GMSGSF + P+H H + Sbjct: 57 ----RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG D ++ P R GP + L ++ ++N Sbjct: 106 PAPRLALCFVDIRRFGHWD-----PGGEWQPGR--GP--------CVLLEYERFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 151 NLSDKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 199 >gi|229489614|ref|ZP_04383477.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] gi|229323711|gb|EEN89469.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] Length = 268 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 99/257 (38%), Gaps = 35/257 (13%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P + + G ++ V+ R K+LLI + G SI HL M G + I + + P H Sbjct: 36 PRYATVDLSGHRVDSVASRGKHLLIRV-GEASIHTHLKMEGQWQIYRP--GERWRRPAHQ 92 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + T ++ + G +++E L + + LGP+ +++ Sbjct: 93 ARILLATEDSVAVGFS--------LGITEILE--LGQEQEAVGHLGPDLLGTDWDSSVAA 142 Query: 158 HQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 +S + ALL+Q+++AG+GN+Y E + + P T L N D+ ++ Sbjct: 143 RNLRAADSVPIGIALLDQRVMAGLGNVYRNEICFLRGIHPKTPTH-LAGNLDAIVDLSFR 201 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 I + I R VYG+ G+PC CG I Sbjct: 202 TINVNKSRRIRVTTGDTRPGRQTW--------------VYGRRGKPC-RRCGTRITEDTL 246 Query: 277 A-----GRSTFYCTYCQ 288 R+ F+C CQ Sbjct: 247 GPDQLTERNIFFCPACQ 263 >gi|332265719|ref|XP_003281864.1| PREDICTED: endonuclease 8-like 1-like [Nomascus leucogenys] Length = 297 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 SGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|255014423|ref|ZP_05286549.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_7] Length = 277 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + +TS K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRY---YTSAEKA---PKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY---LTHQFHKKNSNLKNALLN 173 F E Y + L P D F+ Y L F KK+ + K L Sbjct: 115 GSIYAFK----GEFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNF-KKDISAKALLAT 167 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + L+ A++SP RK +L + + + L ++ L + GG Sbjct: 168 EQRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDSLFNTVKSTLEEMTCRGG 221 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G++G ++ S +PC CG+ I++ G S +YC +CQ Sbjct: 222 RDTEKDLY--GALGNYRTILSK-NTYHDPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|289209423|ref|YP_003461489.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] gi|288945054|gb|ADC72753.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] Length = 280 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 33/246 (13%) Query: 53 VSRRAKYLLIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNT 107 VS R K+LLI LE + HLGM G++ + P H + L + Sbjct: 47 VSARGKHLLIALEDAAGRAWRLRTHLGMYGTW--HQYAPGAAWHKPDHQAWAVLRLADRV 104 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 ++ PR + L E + R +GP+ D + + + Sbjct: 105 ------LVCFHPRELAWQLLSEGRADPERLDAR-VGPDLLDATVELDEVVQRIRTNCDPA 157 Query: 168 K---NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + + LL+Q + AGIGNIY E L+ P+ ++ T +D+L + + ++ Sbjct: 158 RPILDVLLDQSLAAGIGNIYKSEVLFLQGRYPLTPVGAI-----TDRDLL-DIYCDSARL 211 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTF 282 L + G R D VYG+ G+ C CG + R + R+T+ Sbjct: 212 LRRNLKPGPRITRARAETD-------EYLHVYGRGGQAC-RTCGTPVERALLGEHLRATY 263 Query: 283 YCTYCQ 288 +C CQ Sbjct: 264 WCPSCQ 269 >gi|156060539|ref|XP_001596192.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980] gi|154699816|gb|EDN99554.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980 UF-70] Length = 389 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 29/204 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-------PHHFSAATRGKKIIDVSRR 56 +PE+ + R + + KN+ + + + + F A GKK+ D Sbjct: 1 MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKVDD---- 56 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+L G + L GS K + P+ + ++ K + Sbjct: 57 --YVLAATSG-----ISLRHDGS----KDEGEKEVWPPKFSKFSLQTAEEP---KVDAAF 102 Query: 117 NDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNLKNALL 172 D RRF + LV+ PL+ GP+P + A +L + +KK +K LL Sbjct: 103 TDSRRFSRIRLVDCVAGAIRNTTPLKENGPDPVIDKDILTAEWLEQKLNKKQVPIKALLL 162 Query: 173 NQKIVAGIGNIYVCEALWRAKLSP 196 +Q ++GIGN E L+RA+L P Sbjct: 163 DQANISGIGNWVGDEILYRARLHP 186 >gi|313159416|gb|EFR58779.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 276 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/305 (19%), Positives = 114/305 (37%), Gaps = 50/305 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----LHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M E+PE R ++ TVTD+ H+ P + A GK + Sbjct: 1 MLEIPESYSFARQAADMLSGRTVTDVFNATHPHKFTWYLGDPADYRARLVGKTVRAAEGH 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT--------- 107 ++ + L+ H+ +S + + + + P + I+ +++ Sbjct: 61 GAFIDLLLDDE----AHIALSDGVNLRYHAPGAEV--PPKYQLLIAFDDDSFLVFTVAMY 114 Query: 108 -NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 +R +++P G + P P D++F+ SN Sbjct: 115 GGIIAFRKNFDNPYYLGALS----------------KPSPLDDAFDEACFGRLLSDAKSN 158 Query: 167 L--KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L K L ++ + G+GN + + L+++ + P RK +L L ++ ++ Sbjct: 159 LSAKAFLATEQRIPGLGNGVLQDILFKSHIHPKRKLATLGDAE------LGRMYSSVKST 212 Query: 225 LIDAIDAGG-SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L D D GG + +D + G G ++ S EPC CG +I + G + +Y Sbjct: 213 LRDMADRGGRDTEKDLL---GKPGGYKTLLSK-NTFAEPC-PGCGGVIVKEAYLGGAVYY 267 Query: 284 CTYCQ 288 C CQ Sbjct: 268 CPVCQ 272 >gi|302876909|ref|YP_003845542.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] gi|307687597|ref|ZP_07630043.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium cellulovorans 743B] gi|302579766|gb|ADL53778.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] Length = 276 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 30/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE ++ + V++N + + + +F + P+ ++ K I + Sbjct: 1 MLEIPESSVLSTQISEVLRNKKIIGVISNHSPHKFAWFHGDPNEYNKILVDKTIHKATPY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I++E ++ + G+S + A K P + + + ++++ +Y Sbjct: 61 GGMIEIKVESSILLFAD-GVSLKY------NAPNEKLPPKHQLLLKFEDSSSVTASVQMY 113 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIY---LTHQFHKKNSNLKNALL 172 G E S K Y + P P + F+ Y L + + + K+ L Sbjct: 114 G-----GIWCFNENSDFKNPYYDIAKDKPSPLCDEFDKNYFFKLINSPDIQKLSTKSFLA 168 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 ++ + G+GN + + LW++KL P RK SL + K++L+ I+KVL++ ++ Sbjct: 169 TEQRIPGLGNGVLQDILWQSKLHPKRKINSLATGD---KELLF---INIKKVLLEMVELN 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G + G+ G ++ S G C S C ++I + G S ++C CQK Sbjct: 223 GRDTEKDLF--GNNGGYKTRMS-KNTVGSSCPS-CDEIIEKANYLGGSIYFCPNCQK 275 >gi|227548294|ref|ZP_03978343.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079612|gb|EEI17575.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 269 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 34/239 (14%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L ++ G ++ HL M G++ I H + + K V + L + + ++ Sbjct: 49 GKHLFMQF-GPETLHTHLKMEGTWSI-HRAGTRWRKPGHTARVVLRLADKQG--EIEIVG 104 Query: 117 NDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQ 174 ++ G +D+ T +YP + LGP+ F+ + + ++ + ALL+Q Sbjct: 105 HE---LGLVDVFPTR---EYPTRMSYLGPDMLAEDFDHDEVVRRILRTPDTEIGRALLDQ 158 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 K AGIGN Y E + A P R+ R + + K +Q +K++ D+ Sbjct: 159 KNAAGIGNEYRAEICFLAGTHPARQVREVDVD---------KHVQLARKLMWANKDS--- 206 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 V + + V+G+ +PC C +IR+ G R ++C CQ Sbjct: 207 ----PVRVTTGVKRAGETSYVFGRNNKPC-RRCTTLIRKGFLGGEGDLERVIWWCPRCQ 260 >gi|51247632|pdb|1TDH|A Chain A, Crystal Structure Of Human Endonuclease Viii-Like 1 (Neil1) Length = 364 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 PGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRESVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|114658202|ref|XP_001143488.1| PREDICTED: nei endonuclease VIII-like 1 isoform 2 [Pan troglodytes] gi|114658204|ref|XP_523224.2| PREDICTED: nei endonuclease VIII-like 1 isoform 11 [Pan troglodytes] gi|114658206|ref|XP_001143639.1| PREDICTED: nei endonuclease VIII-like 1 isoform 3 [Pan troglodytes] gi|114658208|ref|XP_001143703.1| PREDICTED: nei endonuclease VIII-like 1 isoform 4 [Pan troglodytes] gi|114658210|ref|XP_001143868.1| PREDICTED: nei endonuclease VIII-like 1 isoform 5 [Pan troglodytes] gi|114658212|ref|XP_001144008.1| PREDICTED: endonuclease 8-like 1 isoform 7 [Pan troglodytes] gi|114658214|ref|XP_001144235.1| PREDICTED: nei endonuclease VIII-like 1 isoform 10 [Pan troglodytes] Length = 390 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 ++ + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 106 PGRRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|10438774|dbj|BAB15337.1| unnamed protein product [Homo sapiens] Length = 390 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 PGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRESVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|114658216|ref|XP_001144075.1| PREDICTED: nei endonuclease VIII-like 1 isoform 8 [Pan troglodytes] gi|114658218|ref|XP_001144152.1| PREDICTED: nei endonuclease VIII-like 1 isoform 9 [Pan troglodytes] Length = 424 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEG------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 ++ + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 106 PGRRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|301779515|ref|XP_002925180.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 1-like [Ailuropoda melanoleuca] Length = 464 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 42/225 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + + V C+ + + + F ++ I S R K L Sbjct: 71 MPEGPELHLASRFVNEACRGL-VFGGCVEKSPVSRNPEVPFESSA---YCISSSARGKEL 126 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L G L+++ GMSGSF + P H H + + Sbjct: 127 RLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDAL-----PAHAH--LRFYTAPPGPR 179 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--SNLKN 169 + + D RRFG DL ++Q GP + L ++ ++N NL + Sbjct: 180 LALCFVDIRRFGRWDL---GGEWQPXXXXXXGP--------CVLLEYERFRENVLRNLAD 228 Query: 170 ---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ALL+Q+ GIGN E L+R ++ P K R +++ Sbjct: 229 KVFDQPICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLE 273 >gi|319935125|ref|ZP_08009565.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] gi|319809950|gb|EFW06333.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] Length = 275 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 14/130 (10%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K ++K L ++ GIGN + + LW A L P RK SL + +L Q I Sbjct: 156 KPTMSIKAFLATEQRFPGIGNGVLQDILWEASLHPKRKVNSLSKQESQ------QLFQAI 209 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG--EPCLSNCGQMIRRIVQAGR 279 Q +L + I+ GG + GYF + K +PC C I + G Sbjct: 210 QSILGEMIEQGGRDTEKNI-----FGYFGGYRTRLSKKTLHQPC-PRCQTPIEKANYLGG 263 Query: 280 STFYCTYCQK 289 + ++C CQK Sbjct: 264 TIYFCPQCQK 273 >gi|302502465|ref|XP_003013223.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] gi|291176786|gb|EFE32583.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] Length = 408 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 18/199 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---------LTNNT 107 KY + + ++H GM+G I + N + +V L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYY-RSNGKDENVEADVWPPKFWKFLLETD 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 N K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 120 NEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVRRK 179 Query: 164 NSNLKNALLNQKIVAGIGN 182 +K LL+Q ++G+GN Sbjct: 180 KVPIKALLLDQANISGLGN 198 >gi|237733045|ref|ZP_04563526.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|229383847|gb|EEO33938.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 277 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 36/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 5 MIELPEAYAIADDLKKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 64 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN----NTNTKKY 112 Y+ I +E N + G + + KP K + + + I+ + N T Y Sbjct: 65 NYYVEIVIE-NYRLTFRDGANIRYY------QKPTK-LKKSKLLITFADQSFINVTTSMY 116 Query: 113 RVIYNDPRRFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 I G D + S +Y L ++GP + + N + ++K L Sbjct: 117 CFI-------GLFDQITGSNNEYYQTELTSIGPLDQEFTLNYFKTLITDETEKLSIKAFL 169 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ + GIGN + ++ AKL P R+ ++L N K++ LI+ + K++ + Sbjct: 170 ATKQRILGIGNGVAQDIMFNAKLFPKRRIKTL--NEQDIKNLYDALIRTLTKMV---ENH 224 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYG-KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G S +D I G+ G ++ K+G P C I++ G S +YC CQK Sbjct: 225 GRDSEKD---IYGNPGGYKTILCAKSYKSGCPI---CHCEIKKEQYLGGSIYYCPNCQK 277 >gi|297296933|ref|XP_002804926.1| PREDICTED: endonuclease VIII-like 1-like [Macaca mulatta] Length = 346 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAHPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 PGPQLALCFVDVRRFGHWDLGGKWQPGRGPCVLQEYEQFRENVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|167756382|ref|ZP_02428509.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] gi|167703790|gb|EDS18369.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] Length = 273 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 36/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 1 MIELPEAYAIADDLEKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN----NTNTKKY 112 Y+ I +E N + G + + KP K + + + I+ + N T Y Sbjct: 61 NYYVEIVIE-NYRLTFRDGANIRYY------QKPTK-LKKSKLLITFADQSFINVTTSMY 112 Query: 113 RVIYNDPRRFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 I G D + S +Y L ++GP + + N + ++K L Sbjct: 113 CFI-------GLFDQITGSNNEYYQTELTSIGPLDQEFTLNYFKTLITDETEKLSIKAFL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ + GIGN + ++ AKL P R+ ++L N K++ LI+ + K++ + Sbjct: 166 ATKQRILGIGNGVAQDIMFNAKLFPKRRIKTL--NEQDIKNLYDALIRTLTKMV---ENH 220 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYG-KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G S +D I G+ G ++ K+G P C I++ G S +YC CQK Sbjct: 221 GRDSEKD---IYGNPGGYKTILCAKSYKSGCPI---CHCEIKKEQYLGGSIYYCPNCQK 273 >gi|295669486|ref|XP_002795291.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] gi|226285225|gb|EEH40791.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] Length = 369 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 19/201 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE--HT----SCAKPIKN-----PQHNHVTISLTN 105 KY + + ++H GM+G ++ HT + A N P + + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDRGEEPWPSKFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEP-ADNSFNAI-YLTHQFH 161 + K + D RR G + LV+ +Y PL+ GP+P D + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGADIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGN 182 K +K LL+Q ++GIGN Sbjct: 181 SKRVPIKALLLDQTNISGIGN 201 >gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] Length = 288 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 28/220 (12%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGM+G+ ++ S + + +H+ + +++NDPR FG + + Sbjct: 85 IHLGMTGALRMQGPS--EQFRQTASDHLALVQAERV------LVFNDPRMFGRVRFATGA 136 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNALLNQKIVAGIGNIYVCEAL 189 + +L PE F + F K+ S +K LL Q+ GIGN E L Sbjct: 137 EPPDW--WISLPPEVVSREFT-VDGVAAFLKRRSRAPIKAVLLMQERFPGIGNWMADEIL 193 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WR+ + P + L TP +I KL +E + V A G + D S F Sbjct: 194 WRSAIHPRQLAGEL-----TPAEI-RKLWRETRWVCEQAQATIGETYAD----PPSTWLF 243 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + GK C ++R + GR+T + Q+ Sbjct: 244 PHRWEDGGK----CPRTGAPLVREQI-GGRTTCWSPKRQR 278 >gi|205360991|ref|NP_078884.2| endonuclease 8-like 1 [Homo sapiens] gi|56404654|sp|Q96FI4|NEIL1_HUMAN RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=FPG1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|29501766|gb|AAO74826.1| nei endonuclease VIII-like 1 (E. coli) [Homo sapiens] gi|119619661|gb|EAW99255.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] gi|119619666|gb|EAW99260.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] Length = 390 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 106 PGPRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|14790078|gb|AAH10876.1| NEIL1 protein [Homo sapiens] gi|22004053|dbj|BAC06476.1| endonuclease VIII [Homo sapiens] gi|123981054|gb|ABM82356.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] gi|123995859|gb|ABM85531.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] Length = 390 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 PGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|302659016|ref|XP_003021203.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] gi|291185091|gb|EFE40585.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] Length = 373 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 16/198 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD----FPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFII--EHTSCAKPIKNPQHNHVTIS------LTNNTN 108 KY + + ++H GM+G I E+T K+ L N Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENFEADVWPPKFWKFLLETDN 120 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 K + D RR G + LV+ +Y PL+ GP+P + +L +K Sbjct: 121 EPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVRRKK 180 Query: 165 SNLKNALLNQKIVAGIGN 182 +K LL+Q ++G+GN Sbjct: 181 VPIKALLLDQANISGLGN 198 >gi|254791860|ref|YP_003076697.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|254591260|gb|ACT70621.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|326345767|gb|EGD69506.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1125] Length = 273 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 23/212 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPE PE+ NL +K +TD+ F FP + + G+ + V R K Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVW-------FAFPQLKTYQSQLIGQHVTHVETRGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 LL +L++ H + G + + T + + T L T ++ Sbjct: 54 ALLTHFSNDLTLYSHNQLYGVWRVVDTG--------EESQTTRVLRVKLQTADKTILLYS 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQK 175 ++++ +P L+ +GP+ D + + + +N LL+Q Sbjct: 106 ASD---IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +AG+GN E LW+ L+ K ++ ++ N Sbjct: 163 FLAGLGNYLRVEILWQVGLTGNHKAKTSMRRN 194 >gi|119619664|gb|EAW99258.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_d [Homo sapiens] Length = 476 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 87 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 142 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 143 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 191 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 192 PGPRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 236 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 237 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 285 >gi|289705671|ref|ZP_06502056.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557619|gb|EFD50925.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 303 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 100/262 (38%), Gaps = 40/262 (15%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-------HNHVTISLTNNT 107 K+ ++ G + VHLGM G++ + A I P+ H+ + Sbjct: 52 KHFFADVSGGRVLHVHLGMYGAWTFGGDQDFVAASSIGAPRRVGEREVHDDGAPAAEPAR 111 Query: 108 NTKKYRVIYNDP----------RRFGFMDLVETSLKYQYPPLRT------LGPEPADNSF 151 + + + P G+ DL+ S P LGP+P ++ Sbjct: 112 DADGW--VQPPPAASTVRLRLRSEHGWADLIGASRCRALTPAEAAEVVAGLGPDPLNDDD 169 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 A + + + L++Q V+GIGNI+ EAL+RA + P R R + ++ Sbjct: 170 PAPFYAAA-RRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSASD---- 224 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVH---IDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L L + ++ + + G H I + ++A VY + G CL CG Sbjct: 225 --LAFLWADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACLV-CG 281 Query: 269 QMIRRIVQ-AGRSTFYCTYCQK 289 + + + A R + C CQ Sbjct: 282 RETIVVEEMAARKLYRCLTCQS 303 >gi|224009399|ref|XP_002293658.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971058|gb|EED89394.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 271 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 98/263 (37%), Gaps = 75/263 (28%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--------------VTDICLHRKNLR-FDFPHHFSAAT 45 MPELPEVE R+ L+ + +T +T C + F + A Sbjct: 1 MPELPEVEKFRQILLPLTAAVTKSKVNSSSSSSACTITIACPSPTPPKVFPSQNDIDAIN 60 Query: 46 RGKKII-DVSRRAKYLLIELE---------------------------GNLSII---VHL 74 RG + DV R+ K L I L+ GN I +H+ Sbjct: 61 RGGYAVGDVLRKGKVLCIVLKKQTQSAAAERATKRRRTNGDTDSCNITGNEPTIYLSLHM 120 Query: 75 GMSGSF--------IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 GM+G + + C + P H H+ I T + ++DPRRFG Sbjct: 121 GMTGRISSPGNVPSLESLSECDE--YPPPHTHMIIKSTES------EACFSDPRRFGSAS 172 Query: 127 L--VETSLKYQYPPLRTLGPEPADNSFN----------AIYLTHQFHKKNSNLKNALLNQ 174 + V P + L P+ ++S + Q + +K LL+Q Sbjct: 173 VFGVWCEGGDLIPSFKDLAPDALESSAGYSCANDVSKMGRKIAEQLSNQRRGIKAVLLDQ 232 Query: 175 K-IVAGIGNIYVCEALWRAKLSP 196 + +V+G+GN E L+R+KL P Sbjct: 233 RAVVSGVGNWVADEILYRSKLHP 255 >gi|325262240|ref|ZP_08128978.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] gi|324033694|gb|EGB94971.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] Length = 273 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 40/299 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV I L + V ++ K +F + P ++AA G+K++ Sbjct: 1 MLELPEVLTISSQLRDAVLGKIVREVLPPVKAHKFCWFNGDPAEYNAALEGRKVVSSEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTNNTNTKKYRVI 115 Y I E L + + G++ + P+K P++ + I L ++T + Sbjct: 61 GIYAEIIFEEGLRLCFNDGVNVRLL--------PLKKVPKNYQLLIVLDDDTALVFTVAM 112 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y G + E Y R A + F+ + QFHK K + + Sbjct: 113 YG-----GIIVHREDYCNEYYEKSRQ-----AVSPFSPEF-EFQFHKMLEECKPGISVKA 161 Query: 176 IVA------GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ++A GIGN + + L+ A++ P RK ++L N K +L + +Q++ Sbjct: 162 LLAADQHFPGIGNGVLQDILFEARIHPKRKLQTL--NEEEKKRLLCCTVGVLQEI----T 215 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG + G+ G ++ S EPC CG I + G S +YC CQ Sbjct: 216 EKGGRDTEK--DLFGNPGGYKTKLS-KNTWKEPC-PVCGGAITKEAYMGGSVYYCPVCQ 270 >gi|119619663|gb|EAW99257.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_c [Homo sapiens] Length = 424 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 56/230 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIY 155 + + + D RRFG DL ++ +++ LR L AD +F+ Sbjct: 106 PGPRLALCFVDIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLRNL----ADKAFD--- 158 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 159 ---------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|313898751|ref|ZP_07832286.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] gi|312956635|gb|EFR38268.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] Length = 273 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 38/300 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ + + + +F F P + + K + V R Sbjct: 1 MIELPEARTIAADLRKEVLGKTIQSVSGNFTDHKFTFYYGNPDTYHDRLKNKAVTAVVER 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT----NTKKY 112 + Y+ +E+E + + G + + AKP + + + + + T+ + T Y Sbjct: 61 SFYVELEIEDEV-LTFRDGANIRWF------AKP-QQFKKSKLLLMFTDGSCLHVTTSMY 112 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNA 170 I+ P+ G D Y L++ D F + H + L K Sbjct: 113 AAIHVFPKTEGAQD------AYYEAELKSCSL--LDECFTYDNFLSKLHHETEKLSVKAF 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L ++ GIGN + L+ A L P RK +L KD + L +++ L + Sbjct: 165 LATKQRFIGIGNGVCQDILFYAGLHPKRKMNTLT------KDEINTLFFSMKQTLQQMVQ 218 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG ++ G G + S + K G P CG I++ G S +YC +CQK Sbjct: 219 EGGRDSEKNIY--GEKGGYHCVMSAGHYKDGCP---KCGGRIQKEQYLGGSIYYCPHCQK 273 >gi|227504232|ref|ZP_03934281.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227199187|gb|EEI79235.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 281 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 63/313 (20%) Query: 1 MPELPEV-EIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAK 58 MPE V ++ R MV + +T T + + R L RFD G + + V K Sbjct: 1 MPEGDSVLQLAERMQFMVGREVTKTSVRVPRYALARFD----------GMECVAVWPYGK 50 Query: 59 YLLIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYR 113 +L +E G+ L + HL M G + I + + P H V + L N R Sbjct: 51 HLFMEFAGDEDEPLILHTHLKMEGQWHIHYA--GDRWRAPGHTARVVLQLANEP-----R 103 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-------AIYLTHQFHKKNSN 166 I GF+++ S + LGP+ D + AI+ + Sbjct: 104 DIEIVGHTLGFVEVYPESDYLGR--IEHLGPDILDPDWEINGGREEAIWRIEA--RPERA 159 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + ALL+QK VAGIGN Y EA + A + P + D+ + I ++ + ++ Sbjct: 160 IGAALLDQKNVAGIGNEYRAEACFIAGMHPAERV----------GDVDVEKIVDVSRTIM 209 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------- 278 A + V G Y V+G+T C CG I + V G Sbjct: 210 WANRFSLIRVTTGVRRAGETTY------VFGRTNARC-RRCGTPIEKGVLGGVDAGGDEG 262 Query: 279 ---RSTFYCTYCQ 288 R ++C +CQ Sbjct: 263 ELERIIWWCPHCQ 275 >gi|281414015|ref|ZP_06245757.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 303 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 36/260 (13%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-------HNHVTISLTNNT 107 K+ ++ G + VHLGM G++ + + A I P+ H+ + Sbjct: 52 KHFFADVSGGHVLHVHLGMYGAWTFGGDQDFAAASSIGAPRRIGEREVHDDGAPAAEPCR 111 Query: 108 NTKKYRVIYNDPR---------RFGFMDLVETSLKYQYPPLRT------LGPEPADNSFN 152 + + V P G+ DL+ S P LGP+P ++ Sbjct: 112 DADGW-VQPPSPAATVRLRLRAEHGWADLIGASRCRALTPAEAADVVAGLGPDPLNDDDP 170 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 A + + + L++Q V+GIGNI+ EAL+RA + P R R + + Sbjct: 171 APFYDLA-RRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSAPD----- 224 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVH---IDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 L L + ++ + + G H I + ++A VY + G CL + Sbjct: 225 -LESLWADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACLVCGRE 283 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 I A R + C CQ Sbjct: 284 AIVVEEMAARKLYRCLTCQS 303 >gi|168705539|ref|ZP_02737816.1| Formamidopyrimidine-DNA glycolase [Gemmata obscuriglobus UQM 2246] Length = 100 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ +T + LR + ++AA G ++ V RR K++ Sbjct: 1 MPELPEVETVVRDLRPLLTGRVITAVRRSAFKLRRTWNPAWAAALAGTRVEAVRRRGKWI 60 Query: 61 LIELE 65 L++LE Sbjct: 61 LVDLE 65 >gi|119619665|gb|EAW99259.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_e [Homo sapiens] Length = 433 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 44 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 99 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 100 ----RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 148 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 149 PGPRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 193 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 194 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 242 >gi|220911527|ref|YP_002486836.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] gi|219858405|gb|ACL38747.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] Length = 276 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 44/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + T+T F P + G + +V R K+L Sbjct: 1 MPEGDSVWRAARQLHEALAGQTLT-------ASDFRVPRFATLNLTGWTVAEVVPRGKHL 53 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ ++G L+I HL M G++ + + P + T + + Sbjct: 54 LMRVKGPGDKALTIHSHLKMEGTWQVYPPGGR--WRKPGFTARCVLRTTAADAVGFS--- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQK 175 G +++V T+ + + LGP+ ++ + + + A+L+Q Sbjct: 109 -----LGILEVVATANEDSI--VGFLGPDLLGPDWDLDEAERRLRARPEVPIGVAILDQS 161 Query: 176 IVAGIGNIYVCEALWRAKL---SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +AGIGNIY CEA + + + +P+ K L K +L + ++V I ++A Sbjct: 162 NLAGIGNIYRCEACFLSGVHPATPVSKVADLRTLMTDAKQLLEANLGPGRRVTI--LNAR 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV------QAGRSTFYCTY 286 G + + G GY+ VY + CL CG +RR + + R ++C Sbjct: 220 GMPVG---RMAGRPGYW-----VYRRDQHACL-KCGTPVRRGLLGKLNGEEERDIYFCPR 270 Query: 287 CQ 288 CQ Sbjct: 271 CQ 272 >gi|296118493|ref|ZP_06837071.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295968392|gb|EFG81639.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 279 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/237 (20%), Positives = 93/237 (39%), Gaps = 30/237 (12%) Query: 59 YLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +LL + II +HLG+ G F+ E + + + ++N R Sbjct: 65 FLLFDAPSPAHIIYIHLGLIGQFLFEDPESRR-------GQIRLHISNGEQAANLR---- 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 P+ + E + L +G +P + L + + + + LL+Q + Sbjct: 114 GPQWCRLITEEEYDAQ-----LAKVGFDPLIADTDPEPLRVKVQRSKRTIGSLLLDQALF 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+G+IY E L+R ++ P R+ L + Q++ +++ + AG Sbjct: 169 AGVGSIYRTEVLFRQQILPSRRGNELTDAQ------FAAIWQDLVELMNYGVVAGRIDTV 222 Query: 238 DYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++G VY + G PC ++ +I++ GR F+C CQ Sbjct: 223 APEHTPEAMGRDPRKDDHGGEVYVYRREGLPCYVCNTPVVSQILE-GRKVFWCPTCQ 278 >gi|149692230|ref|XP_001493563.1| PREDICTED: similar to nei endonuclease VIII-like 1 (E. coli) [Equus caballus] Length = 462 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + R + + V C+ + +N F + SA+ RGK++ Sbjct: 74 MPEGPELHLASRFVNEACGGL-VFGGCVEKSPISRNPEVPFESSAYRISASARGKEL--- 129 Query: 54 SRRAKYLLIELEG------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G L+++ GMSGSF + P H + Sbjct: 130 ----RLTLSPLPGAQPPQEPLALVFRFGMSGSFQLVPRDMLPP-------HAHLRFYTAP 178 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL ++ P R GP + L ++ ++N Sbjct: 179 PGPRLALCFVDIRRFGHWDL-----GGEWQPGR--GP--------CVLLEYEQFRENVLQ 223 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R ++ P K R++++ Sbjct: 224 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLE 272 >gi|330944162|gb|EGH46279.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 58 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAK Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAK 58 >gi|38233426|ref|NP_939193.1| putative endonuclease [Corynebacterium diphtheriae NCTC 13129] gi|38199686|emb|CAE49345.1| Putative endonuclease [Corynebacterium diphtheriae] Length = 268 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 115/303 (37%), Gaps = 52/303 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE V + R L M+ T+T L +RFD G+ I V Sbjct: 1 MPEGDSVFQLARRLSF-MQGRTITHTSLRVPAYATMRFD----------GRTITKVWPYG 49 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + G+ + HL M G++ + + P H + ++ V+ + Sbjct: 50 KHLFMHI-GSEILHTHLKMEGTWAVH--RAGDRWRKPGHTARVVLHLDDAPHDPIEVVGH 106 Query: 118 DPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSF----NAIYLTHQFHKKNSNLKNALL 172 + GF V ++YP + LGP+ S+ A + + ALL Sbjct: 107 E---LGF---VRVFPDHEYPQRIAHLGPDVLSESWPTRGEAEARKRLLGQPERAIGLALL 160 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GN Y E + + P + KD+ + + + L+ A Sbjct: 161 DQKVLAGVGNEYRAEICFICGIHPATRI----------KDVDVDRVLSVTRRLMWANRFS 210 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR-------IVQAGRSTFYCT 285 + + G Y V+G+ +PC CG +IR+ + R ++C Sbjct: 211 PIRVTTGIRRPGETSY------VFGRNHKPC-RRCGTLIRKSTLVDDPTTELERIIWWCP 263 Query: 286 YCQ 288 CQ Sbjct: 264 LCQ 266 >gi|184199953|ref|YP_001854160.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580183|dbj|BAG28654.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 335 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 30/144 (20%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + + AL++Q+ +AGIGN+Y E L+ + +P + SL P+ L +++ Sbjct: 202 QPDRAIGTALMDQRNLAGIGNVYRVETLFMTRTNPWARVDSL------PEGKLREIVVLA 255 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR-------- 273 K+L D S+R V G + F YGK G+PC CG ++R Sbjct: 256 HKLLHLNKD---RSMRSTV---GQAPPGRPLFWAYGKDGQPC-RRCGTQLKRGEIDDALL 308 Query: 274 ---------IVQAGRSTFYCTYCQ 288 VQ R+ +C CQ Sbjct: 309 TVDPAPSRTAVQHLRTIAWCPRCQ 332 >gi|269119716|ref|YP_003307893.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] gi|268613594|gb|ACZ07962.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] Length = 277 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 39/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----PHHFSAATRGKKIIDVSR 55 M E+PE + + L +KN + ++ + +F F P +++A GKKI + Sbjct: 1 MLEIPESFNLAKQLNQTVKNKVIKNVKAAQSPHKFAFYFNDDPDNYNALLSGKKIEKIEP 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT----NTKK 111 + I E N+ I+ G++ ++ K P+ + + + +N+ + Sbjct: 61 IGGQVEITAE-NIRILFGDGVNARYLPAGE------KIPEKHQLLMEFDDNSCIVCTVQM 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKN 169 Y V++ F + Y + P P F+ Y K ++K Sbjct: 114 YGVLH------AFTHGENDNFYYHVAKTK---PSPLSKDFDISYFEKIISDTKPTLSVKA 164 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L ++ + G GN + + L+ + ++P K + L ++ + +L Q I+++L+ Sbjct: 165 LLATEQRIPGFGNGILQDILFISGINPKTKIKFLDSSD------IDRLFQNIKEILLKMA 218 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG + G+ G ++ S KT EPC CG I + G + ++C CQ Sbjct: 219 ENGGRDTEK--DLFGNYGNYKTVLSA--KTYKEPC-PVCGTAITKQAYLGGNIYFCPVCQ 273 >gi|159489098|ref|XP_001702534.1| predicted protein [Chlamydomonas reinhardtii] gi|158280556|gb|EDP06313.1| predicted protein [Chlamydomonas reinhardtii] Length = 297 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 24/229 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R + + K T V + K + P A G+ ++ R+ Sbjct: 1 MPELPEVEAARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKGM 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 I+V + H P+ + + L R+ Y D Sbjct: 61 --------TGGIVVKGVGVTKYKRAHLESDPESWPPRFTKLELELQGGG-----RLAYVD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPE------PADNSFNAIYLTHQFHKKNSNLKNALL 172 RRFG + L+ PL LG + P F + + +K LL Sbjct: 108 SRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERVVRAPSLRIKALLL 167 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +Q+ +GIGN E L++A++ P + SL ++G+ L+ I+E+ Sbjct: 168 DQEFCSGIGNWVADEVLYQARIHPEQTATSL--DDGS-MAALHAAIREV 213 >gi|119962666|ref|YP_948118.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949525|gb|ABM08436.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 295 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 53/273 (19%), Positives = 102/273 (37%), Gaps = 50/273 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQH--NHVTI 101 G ++D + K L + + L + VHLG+ G++ S A I P+ + Sbjct: 41 GHIMVDAAAHGKQLFLRFDHQLFLHVHLGLYGAWSFGGDSSFTGASSIGAPRRIGERESG 100 Query: 102 SLTNN---------TNTKKYRVIYNDPRRFGFMDLVETS------LKYQYPPLRTLGPEP 146 S ++ + R++ + G+ DL + L LGP+P Sbjct: 101 SAADDGEYSGPPAPVGAVRVRLVSD----HGWADLRGATTCAAITSAEAAAVLDRLGPDP 156 Query: 147 ADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 N + + ++ + + +++Q ++AG+GNIY E L+R + P S+ Sbjct: 157 LHNRPGDRDEFIRRLRRRKTAVALLMMDQSVLAGVGNIYRAEVLFRQAVDPWTPGSSID- 215 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD----------YVHIDGSIGYFQNAFSV 255 ++ ++ D +D +RD + + F V Sbjct: 216 ------------VETAGRLWDDTVDTMSDGVRDGRIVTTPSTLWTGGGAAAPDADAHF-V 262 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G PC + CG ++ R ++C CQ Sbjct: 263 YKRDGMPCRA-CGTLVGMTEIGARKLYWCPGCQ 294 >gi|50954590|ref|YP_061878.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951072|gb|AAT88773.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 330 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 32/162 (19%) Query: 142 LGPEP-------ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 LGP+P A+ +F A KK + + L++Q +V+GIGN+Y E L+RA+ Sbjct: 185 LGPDPMLDSGPVAEETFVAA-----VRKKPTAIALLLMDQSVVSGIGNVYRAELLFRAR- 238 Query: 195 SPIRKTRSLIQNNGTP-----KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG---SI 246 QN TP +DI+ L ++ ++ ++ G D + + ++ Sbjct: 239 ----------QNPHTPGKLVAEDIVRALWRDWVQLHRIGVETGQMMTMDDLDEEAYRRAM 288 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VY + G PC CG I V GR ++C Q Sbjct: 289 AKREDRHWVYKREGLPC-RVCGTHIVMEVFGGRKLYWCPRDQ 329 >gi|225388501|ref|ZP_03758225.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] gi|225045432|gb|EEG55678.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] Length = 296 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 68/295 (23%), Positives = 110/295 (37%), Gaps = 32/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE+ +I R L VT + K +F + P + A G +I Sbjct: 21 MLEYPEIAVISRQLQKETAGKMVTAVLPPMKPHKFCWFNGDPAGYEAQLTGSRITAAEGF 80 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + + + + G++ + T KP P + I L + T +Y Sbjct: 81 GIFVELVFDNGRRLCFNDGVN----VRLTGGEKP---PAACQLLIRLDDGTALAFTVAMY 133 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLNQ 174 G + L + S +Y P +F A Y + L K L + Sbjct: 134 ------GGIYLHDGSYGDEYYVKSRAAEPPLSKAFAARY-EKALGEAGPKLTAKAFLATE 186 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + GIGN + + L+RA + P R+ S+ D L+ + VL + AGG Sbjct: 187 QRFPGIGNGVLQDILFRANIHPRRRLESMS------GDEKAGLLAAVTSVLGEMETAGGR 240 Query: 235 SLRDYVHIDGSIGYFQNAFSVYG-KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G G ++ S G K+G P CG I + G S +YC CQ Sbjct: 241 DTEKDIY--GQPGGYRTIMSKNGMKSGCPA---CGGPIVKAAYLGGSVYYCPACQ 290 >gi|189467099|ref|ZP_03015884.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] gi|189435363|gb|EDV04348.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 62/297 (20%), Positives = 114/297 (38%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + V+ T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVLTLSKQANDVLSGKTITQVFNATKPHKFTFYSGDPLEYGKLLVGKTILSSKGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L GN+ + + G+S + K P + + ++ + + + Sbjct: 61 GMFVDFYLSGNVIMNIGDGVSARYYNPGD------KVPANYQLLLTFKDES------FLV 108 Query: 117 NDPRRFGFMDLVETSL---KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 +GF+ ++ KY ++ P + F KK K L Sbjct: 109 FTVAMYGFISAYPDAVIDNKYYTISRESISPLSDAYTEAEFEKLFAFAKKTLTAKALLAT 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + L+ A + P +K L K +L+K +++ + G Sbjct: 169 EQRIPGVGNGVTQDILFNAGIHPKQKVFDLSDGQ---KGVLFKSLKDTLMAMTS-----G 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G ++ S KT + PC CG +I + G S +YC+ CQK Sbjct: 221 RGRDTQTDLYGNEGGYKTILS--SKTWKNPC-PRCGSVIVKEAYLGGSVYYCSECQK 274 >gi|239917495|ref|YP_002957053.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838702|gb|ACS30499.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 241 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 16/176 (9%) Query: 123 GFMDLVETSLKYQYPPLRT------LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 G+ DL+ S P LGP+P ++ A + + + L++Q Sbjct: 73 GWADLIGASRCRALTPAEAADVVAGLGPDPLNDDDPAPFYDLA-RRTRRPIGVVLMDQAA 131 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+GIGNI+ EAL+RA + P R R + + L L + ++ + + G Sbjct: 132 VSGIGNIFRAEALFRAGIDPWRPAREVSAPD------LESLWADNAALMREGVRLGRIVT 185 Query: 237 RDYVH---IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H I + ++A VY + G CL + I A R + C CQ Sbjct: 186 TRPEHRPGIPAEAAWPEHANYVYQRQGLACLVCGREAIVVEEMAARKLYRCLTCQS 241 >gi|149495026|ref|XP_001518546.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli), partial [Ornithorhynchus anatinus] Length = 515 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 31/216 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR---KNLRFDF---PHHFSAATRGKKIIDVS 54 MPE PE+ + R + V + + +N F +H SA +RGK++ Sbjct: 1 MPEGPELYLASRYVNEVCRGLVFAGAVEKSSVSRNPEVPFCSDSYHISAVSRGKEV---- 56 Query: 55 RRAKYLLIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K L L G + ++ GMSGSF + P+H H+ Sbjct: 57 ---KLTLTPLTGTEPGPVDLVFRFGMSGSFRLVPAEAL-----PRHAHLRFYTAAPC--- 105 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKN 169 + + + D RRFG ++ T + P + F L + K N + Sbjct: 106 RRALCFVDVRRFGRWEVQGTWQAGRGPCVLQ-----EYEKFRENVLQNLEDKVFNKPICE 160 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ALL+Q+ GIGN E L+R ++ P + R++++ Sbjct: 161 ALLDQRFFNGIGNYLRAEILYRLRIPPFERARTVLE 196 >gi|297697152|ref|XP_002825734.1| PREDICTED: endonuclease VIII-like 1-like isoform 1 [Pongo abelii] Length = 390 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 1 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 56 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 57 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 106 PGLRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 199 >gi|297697156|ref|XP_002825736.1| PREDICTED: endonuclease VIII-like 1-like isoform 3 [Pongo abelii] Length = 402 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 13 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 68 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 69 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 117 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 118 PGLRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 162 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 163 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 211 >gi|116670953|ref|YP_831886.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116611062|gb|ABK03786.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 305 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 11/155 (7%) Query: 139 LRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L LGP+P N + + + L L++QK++AG+GN+Y E L+R L P Sbjct: 156 LARLGPDPLRNLPGDKDGFVAGLRARKTPLAALLMDQKVIAGVGNVYRAELLFRQGLDPW 215 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNAFS 254 RSL + L ++ ++ D + G + R + + + Sbjct: 216 LPGRSL------DAEAAGGLWEDTVAMMSDGVRDGRIITTPPRYWTEPAAGLPAPGESHF 269 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G C CG + R ++C CQ+ Sbjct: 270 VYRRHGLDC-RICGSPVALTDLGARKLYWCPVCQQ 303 >gi|124249442|ref|NP_001074345.1| endonuclease VIII-like 1 [Gallus gallus] gi|53130742|emb|CAG31700.1| hypothetical protein RCJMB04_9m20 [Gallus gallus] Length = 363 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 29/126 (23%) Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 ++ P+H H+ T + + + + DPRRFG L E + P R GP Sbjct: 68 LQPPRHAHLRF-FTRESPPRA--LCFVDPRRFGTWRLGEA-----WQPDR--GP------ 111 Query: 151 FNAIYLTHQFHKKN--SNLKNA---------LLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 + L + ++N SNL++A LLNQK GIGN E L+RAK+ P K Sbjct: 112 --CVLLEYPAFRENVLSNLEDAAFDKPVCEALLNQKYFNGIGNYLRAEILYRAKIPPFEK 169 Query: 200 TRSLIQ 205 R++++ Sbjct: 170 ARTVLE 175 >gi|297697154|ref|XP_002825735.1| PREDICTED: endonuclease VIII-like 1-like isoform 2 [Pongo abelii] Length = 476 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + + V C+ + +N F + SA+ RGK++ Sbjct: 87 MPEGPELHLASQFVNEACRAL-VFGGCVEKSSVSRNPEVPFESSAYRISASARGKEL--- 142 Query: 54 SRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + +L L G L+++ GMSGSF + + P+H H + Sbjct: 143 ----RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAH--LRFYTAP 191 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL K+Q P R GP + +Q ++N Sbjct: 192 PGLRLALCFVDIRRFGRWDL---GGKWQ--PGR--GP--------CVLQEYQQFRENVLR 236 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 237 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 285 >gi|269955906|ref|YP_003325695.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304587|gb|ACZ30137.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 398 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 45/185 (24%) Query: 142 LGPEP--ADNSFNAI-----YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 LGP+P D ++ + + + L+ Q +VAG+GNI+ EAL+RA L Sbjct: 222 LGPDPIRPDGGHGSLAKARDVFVTRVCRSRVTVGQQLMEQSVVAGVGNIFRAEALFRAGL 281 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG---SSLRDYVH---------- 241 P+R R + +L + ++ ++ D + G + D H Sbjct: 282 DPLRPGRDVDPA------VLGAIWDDLVDLMHDGVRRGAIVTTRPADRGHDAPGIRAAGG 335 Query: 242 -----------------IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 G++ + +F VY + G PC CG + AGR+ ++C Sbjct: 336 AAALGATTRRHERRAPVPPGAV-PREESFYVYQRDGLPC-RLCGAPVLVKDLAGRALYWC 393 Query: 285 TYCQK 289 CQ Sbjct: 394 PVCQS 398 >gi|219116146|ref|XP_002178868.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409635|gb|EEC49566.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 367 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 43/258 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGK-KIIDVSRRAK 58 MPELPEVE R+ L+ ++ + + I + N R + GK +D+ R+ K Sbjct: 1 MPELPEVEQFRQLLLPLVSSSSPIQISAWKDNPPRVWLSEEQINSLSGKYYCVDILRKGK 60 Query: 59 YLLI------------ELEGNLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHN 97 L I E + ++ + +H+GM+G + + + A P++ Sbjct: 61 QLCIVLQPSKANGQKKEPKKSVYLYLHMGMTGRISSPNRESGWGRQSSKVADIEYPPRYT 120 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA---DNSFNAI 154 ++T + T+ Y+ ++DPR+FG + L P L P+ D Sbjct: 121 YLTFA------TEHYQAAFSDPRKFG-----KAVLSDNLDPFGLLAPDALNCNDEKLIRN 169 Query: 155 YLTHQFHKKNSNLKNALLNQ-KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + F ++ ++K LL+Q ++ +G+GN E L++ + P ++ L + G+ Sbjct: 170 EIIPGFVEQTRSIKAILLDQNRVCSGVGNWVADEVLYQIGMHPDQQY--LTEEQGSR--- 224 Query: 214 LYKLIQEIQKVLIDAIDA 231 L++ +Q I + + +++ Sbjct: 225 LFETLQAIVRTAVGCLNS 242 >gi|303286994|ref|XP_003062786.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] gi|226455422|gb|EEH52725.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] Length = 477 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 87/229 (37%), Gaps = 45/229 (19%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VH GMSG F + H + P P + L + + D MD E+ Sbjct: 79 VHFGMSGRFSV-HAASDPPAATPT---TRLKLEGHGRVAMLSAMVVD-----LMD--ESG 127 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 + + LG +P A L +F ++ AL++Q + AG+GNIY E L++ Sbjct: 128 FEAKR---VALGQDPLREDACADTLWEKFTASRKSVGLALMDQSMFAGVGNIYRAEILFK 184 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK-------VLIDAIDA---GGSSLRDYVH 241 A + P + R L + G + ++ +Q+ + +D +A G R YV+ Sbjct: 185 AGVHPEQPCRDL--DRGVFDSLWRHSVELLQRGYSTGSILTVDPEEALVLGEPWTRRYVY 242 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC-TYCQK 289 S G CG + A R+ + C CQK Sbjct: 243 NQSSCG------------------RCGGKVLTWEMANRTVYCCGGSCQK 273 >gi|74001005|ref|XP_854395.1| PREDICTED: similar to Endonuclease VIII-like 1 (Nei-like 1) (DNA glycosylase/AP lyase Neil1) (DNA-(apurinic or apyrimidinic site) lyase Neil1) (NEH1) (FPG1) [Canis familiaris] Length = 389 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 24/230 (10%) Query: 1 MPELPEVEIIRRNL-----MMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVS 54 MPE PE+ + R + +V T C + F+ + SA+ RGK++ Sbjct: 1 MPEGPELHLASRFVNAACAGLVFGGAVETSRCSRGPAVPFESSAYRISASARGKELRLAL 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 R L E L+++ GM+GSF + P H H + + + Sbjct: 61 RPLPGALPARE-PLALVFRFGMTGSFRLAPRDAL-----PAHAH--LRFYTAPPGPRLAL 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLN 173 + D RRFG L + P + F L + HK + ALL+ Sbjct: 113 CFVDARRFGRWHLGGDWQPGRGPCVLL-----EYERFRENVLRNLAHKAFEQPICEALLD 167 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLI----QNNGTPKDILYKLIQ 219 Q+ GIGN E L R + P K R+++ Q +P+ L + I+ Sbjct: 168 QRFFNGIGNYLRAEILHRLGIPPFEKARTVLEALQQRRPSPEQTLSQKIR 217 >gi|224000619|ref|XP_002289982.1| glycosylase [Thalassiosira pseudonana CCMP1335] gi|220975190|gb|EED93519.1| glycosylase [Thalassiosira pseudonana CCMP1335] Length = 447 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%) Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++ +ALLNQ I G+GNI E+L R+ + P + +L L ++++ +K Sbjct: 170 SISDALLNQDIFPGVGNIIKIESLHRSLVDPRKIVNTLSDQE------LRRIVRHTRKFS 223 Query: 226 IDAIDAG--GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +D ++ G G+ L + G+ G G G+ S GQ R TF+ Sbjct: 224 MDWLNTGRAGTKLVYNQTVCGTCGGMTVKMQKIGGGGDRNTSGNGQAF-----MSRVTFW 278 Query: 284 CTYCQ 288 CT CQ Sbjct: 279 CTACQ 283 >gi|296085164|emb|CBI28659.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + V K +T I K + P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 + ++L+ GM+G+ I+ + K Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTK 91 >gi|37681885|gb|AAQ97820.1| nei endonuclease VIII-like 1 [Danio rerio] Length = 438 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 44/183 (24%) Query: 43 AATRGKKII--------DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 A +RGK++ D S + K + + ++++ GMSG F + P Sbjct: 49 AQSRGKEVRLTLTPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSVD-----ELP 103 Query: 95 QHNHVTISLTNNTNTKKYRVI-YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 +H H+ TN +RV+ + D RRFG + K + P Sbjct: 104 KHAHLRFY----TNETPHRVLSFEDTRRFGSWQPNGSWQKNRGP---------------C 144 Query: 154 IYLTHQFHKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 I ++ ++N SNL + ALLNQK GIGN E L+R ++ P K R+ Sbjct: 145 IMFEYESFRENVLSNLSDKAFDKPICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKART 204 Query: 203 LIQ 205 +++ Sbjct: 205 VLE 207 >gi|154311839|ref|XP_001555248.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] gi|150850603|gb|EDN25796.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] Length = 381 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Query: 111 KYRVIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSN 166 K + D RRF + LV PL+ GP+P + A +L + +KK Sbjct: 91 KVEAAFTDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQVP 150 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 +K LL+Q ++GIGN E L+ A+L P Sbjct: 151 IKALLLDQANISGIGNWVGDEILYNARLHP 180 >gi|297582947|ref|YP_003698727.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] gi|297141404|gb|ADH98161.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] Length = 274 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + N + ++ L+ D+ + AT + V + K L Sbjct: 1 MPEGPEIRLAADEVEHAVLNKPLLEVFFGLPPLK-DYEDILTRATVNR----VQTKGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + S+ H + G + I+ S + P N Q + L +T + ++Y+ Sbjct: 56 LTHFDNGYSVYSHNQLYGKWYIK-PSYSYPKTNRQ-----LRLALHTGDRS-ALLYSA-- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + ++ T +P ++ GP+ L Q K N L LL+Q + Sbjct: 107 --SDIAVLRTDEVPDHPFIKKTGPDILSEPVTVNDLLRQMTDKRFFNRQLGGLLLDQTFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ + P ++ L L +L + + ++ + + G +L Sbjct: 165 AGIGNYLRTEILFITGIHPKKRPADLSDT------ALIRLAEAVILMMTRSYETKGLTLD 218 Query: 238 -DYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G ++ + + + EPC C I +I A R + C CQ Sbjct: 219 PERVQTKKAAGEPRSHYRHFAFNRHMEPCY-QCRTAIEKITVASRRLYVCPVCQ 271 >gi|255017643|ref|ZP_05289769.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-515] Length = 83 Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + K + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSF 80 LL +L N +I+ HL M G F Sbjct: 61 LLFDLT-NCTILSHLRMEGKF 80 >gi|5020105|gb|AAD38025.1|AF148219_3 formamidopyrimidine-DNA glycosylase MutM [Nostoc sp. PCC 8009] Length = 163 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 30/148 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N +T D+ L R + + F F G I + RR Sbjct: 1 MPELPEVETVRRGLNQLTLNQEITGGDVLLER-TIAYPFSVGEFINGVEGYAIANWHRRG 59 Query: 58 KYLLIEL----------EGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KYL+ EL N S + VHL M+G + P H H Sbjct: 60 KYLVAELSQSPQQEDAGSKNFSASPATSWLGVHLRMTGQLLWLDRD------EPLHKHTR 113 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 + L + ++ R + D R FG M V Sbjct: 114 VRLFFG-DRQELRFV--DQRTFGKMWWV 138 >gi|292492013|ref|YP_003527452.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] gi|291580608|gb|ADE15065.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] Length = 110 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELP+VE +R L + T+ + + L D H +++ + R KY Sbjct: 1 MPELPDVETFKRYLDATALHQTIDSVSVKATVLLKDLSIRHLQHCLEKRQLKETQRHGKY 60 Query: 60 LLIELEGNLSIIVHLGMSG 78 L + L+ +++H GM+G Sbjct: 61 LFVSLDDGDWLVLHFGMTG 79 >gi|325962094|ref|YP_004240000.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323468181|gb|ADX71866.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 282 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%) Query: 170 ALLNQKIVAGIGNIYVCEALWRAKL---SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 ALL+Q+ +AGIGNIY CEA + + + SP+ L K +L + ++V I Sbjct: 156 ALLDQRNLAGIGNIYRCEACFLSGVHPASPVSAVPDLRTMMTDAKQLLEVNLGPGRRVTI 215 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV------QAGRS 280 ++A G + + G GY+ VY + +PCL CG IRR V R Sbjct: 216 --LNARGLPVG---RMAGRPGYW-----VYRREHQPCL-KCGTPIRRGVLGKSNGDEERD 264 Query: 281 TFYCTYCQ 288 ++C CQ Sbjct: 265 IYFCPTCQ 272 >gi|151557030|gb|AAI49866.1| NEIL1 protein [Bos taurus] Length = 221 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 46/184 (25%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIK 92 + SA RGK++ + L L G L+++ GM+GSF + + P Sbjct: 45 YSISALARGKEL-------RLTLSPLPGAQPQREPLALVFRFGMTGSFQLVPSDALPP-- 95 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 H + + + + D RRFG DL ++ P R GP Sbjct: 96 -----HAHLRFYTAPPGPRLALCFVDIRRFGRWDL-----GGEWQPGR--GP-------- 135 Query: 153 AIYLTHQFHKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 + L ++ ++N NL + ALL+Q+ GIGN E L+R ++ P K R Sbjct: 136 CVLLEYEQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKAR 195 Query: 202 SLIQ 205 ++++ Sbjct: 196 TVLE 199 >gi|61554363|gb|AAX46545.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 332 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + V C+ + +N F + SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACREL-VFGGCVEKSPVSRNPEVPFESSAYSISALARGKEL--- 56 Query: 54 SRRAKYLLIELEG------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G L+++ GM+GSF + + P H + Sbjct: 57 ----RLTLSPLPGAQPHREPLALVFRFGMTGSFQLVPSDALPP-------HAHLRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL ++ P R GP + L ++ ++N Sbjct: 106 PGPRLALCFVDIRRFGRWDL-----GGEWQPGR--GP--------CVLLEYEQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R ++ P K R++++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLE 199 >gi|311740895|ref|ZP_07714722.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] gi|311304415|gb|EFQ80491.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] Length = 272 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVI 115 K+L ++ + + + HL M G++ I + + P H + + L N+ R I Sbjct: 49 GKHLFMQFDQAI-VHTHLKMEGTWAIHYA--GDRWRKPGHTARIVLQLANSP-----RDI 100 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQ 174 + GF+D+ +Q + LGP+ D ++ + + + + ALL+Q Sbjct: 101 EVVGHQLGFVDIYPADHYHQR--IAHLGPDILDPEWDREEALRRLNSRPQRAIGAALLDQ 158 Query: 175 KIVAGIGNIYVCEALWRAKLSP 196 K+VAGIGN Y EA + A + P Sbjct: 159 KVVAGIGNEYRAEACFLAGVHP 180 >gi|55727714|emb|CAH90608.1| hypothetical protein [Pongo abelii] Length = 240 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 48/185 (25%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIK 92 + SA+ RGK++ + +L L G L+++ GMSGSF + + Sbjct: 45 YRISASARGKEL-------RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----E 92 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL------------VETSLKYQYPPLR 140 P+H H + + + + RRFG DL ++ +++ LR Sbjct: 93 LPRHAH--LRFYTAPPGLRLALCFVGIRRFGRWDLGGKWQPGRGPCVLQEYQQFRENVLR 150 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 L AD +F+ + ALL+Q+ GIGN E L+R K+ P K Sbjct: 151 NL----ADKAFD------------RPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKA 194 Query: 201 RSLIQ 205 RS+++ Sbjct: 195 RSVLE 199 >gi|297463383|ref|XP_001789711.2| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|297488077|ref|XP_002696720.1| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|296475464|gb|DAA17579.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 401 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 54/229 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR----KNLRFDF---PHHFSAATRGKKIIDV 53 MPE PE+ + + + + V C+ + +N F + SA RGK++ Sbjct: 1 MPEGPELHLASHFVNEACREL-VFGGCVEKSPVSRNPEVPFESSAYSISALARGKEL--- 56 Query: 54 SRRAKYLLIELEG------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 + L L G L+++ GM+GSF + + P H + Sbjct: 57 ----RLTLSPLPGAQPHREPLALVFRFGMTGSFQLVPSDALPP-------HAHLRFYTAP 105 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--S 165 + + + D RRFG DL ++ P R GP + L ++ ++N Sbjct: 106 PGPRLALCFVDIRRFGRWDL-----GGEWQPGR--GP--------CVLLEYEQFRENVLR 150 Query: 166 NLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 NL + ALL+Q+ GIGN E L+R ++ P K R++++ Sbjct: 151 NLADKAFDRPICEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLE 199 >gi|291009150|ref|ZP_06567123.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 19/153 (12%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + VHLG+ G+F T P+ P+ V + + +T+ R E Sbjct: 64 VHVHLGLYGTF----TESELPMDEPR-GQVRMRIVGDTHGTDLRGPTA----------CE 108 Query: 130 TSLKYQYPPLRT-LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + LR LGP+P + + + +++ LL+QK++AG GN+Y E Sbjct: 109 LLTDAEVEALRDRLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNVYRAEV 168 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 L+R + P R L + D+++ + E+ Sbjct: 169 LFRHGIPPRTPGRDLGRER---WDLVWSDLVEL 198 >gi|255324812|ref|ZP_05365925.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] gi|255298112|gb|EET77416.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] Length = 272 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%) Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVI 115 K+L ++ + + + HL M G++ I + + P H + + L N+ R I Sbjct: 49 GKHLFMQFDQAI-VHTHLKMEGTWAIHYA--GDRWRKPGHTARIVLQLANSP-----RDI 100 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQ 174 + GF+D+ +Q + LGP+ D ++ + + + + ALL+Q Sbjct: 101 EVVGHQLGFVDIYPADHYHQR--IAHLGPDILDPEWDREEALRRLNSRPQRAIGAALLDQ 158 Query: 175 KIVAGIGNIYVCEALWRAKLSP 196 K+VAGIGN Y EA + A + P Sbjct: 159 KVVAGIGNEYRAEACFLAGVHP 180 >gi|156045703|ref|XP_001589407.1| hypothetical protein SS1G_10046 [Sclerotinia sclerotiorum 1980] gi|154694435|gb|EDN94173.1| hypothetical protein SS1G_10046 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1351 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 16/126 (12%) Query: 145 EPADNSFNAIYLTHQFHKKNSN----------LKNALLNQKIVAGIGNIYVCEALWRAKL 194 E D++ +A++ THQ K+ S+ LK ++ + + G G+IY+ +L Sbjct: 700 ETVDSNGDAVWATHQLAKEGSSPNRSDEIVIFLKWFNVDAQSLVGCGHIYISNQRRVEEL 759 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 +P +++ G P+D KL +EI+ +I+ + A SL+ DG I FQ A Sbjct: 760 APF-----ILRRMGWPEDTKLKLYEEIKPDMIEPMKA-KQSLKAAELQDGDIVCFQKALE 813 Query: 255 VYGKTG 260 ++G Sbjct: 814 KSSESG 819 >gi|225430652|ref|XP_002268184.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 216 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + V K +T I K + P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 + ++L+ GM+G+ I+ + K Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTK 91 >gi|301345446|ref|ZP_07226187.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595027|ref|ZP_07240035.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 71 Score = 43.5 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQKLV-GQRLIGLNRRSKYI 58 Query: 61 LIELE 65 L E E Sbjct: 59 LAEFE 63 >gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] Length = 683 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 18/178 (10%) Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + Y DPRRFG + LV + + LG +P+ + ++++ +K AL++ Sbjct: 17 LAYVDPRRFGKIKLVRDVKEV----IGGLGVDPSKALPEGDAFAAMWKRRSAPIKTALMD 72 Query: 174 QKIVAGIGNIYVCEALWRAK----LSPIRKT----RSLIQNNGTPKDILYKLIQEIQKVL 225 QKI+AGIGN R + ++ +R T R+ + ++ ++ I++ + Sbjct: 73 QKIMAGIGNWMADGMFERTRTDDAIASLRSTEILYRARVHPETRANEMTDSQLEAIRERI 132 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 ++ + ++ D+ + Q +GKT ++ G I+ I GR+T Y Sbjct: 133 LEVVTVACAANSDHDLFPSDWLFHQR----WGKTDGAKVN--GDAIKFIEVGGRTTAY 184 >gi|126272518|ref|XP_001379906.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli) [Monodelphis domestica] Length = 420 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 68/236 (28%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKI--------ID 52 MPE PE + + + V +C K+L F P S +R ++ I Sbjct: 1 MPEGPE---------LYLASCYVNSMC---KDLVFAGPVEKSEVSRNPEVPFESSAYRIS 48 Query: 53 VSRRAKYLLIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV---T 100 + R K + + L + L ++ GMSGSF + P+H H+ T Sbjct: 49 ATSRGKEVRLTLSPLPKAHPPQEPLDLVFRFGMSGSFQLVPADAL-----PKHAHLRFYT 103 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 IS + + + D RRFG ++ T + P R GP + ++ Sbjct: 104 IS-----PAPRQALCFVDVRRFGHWEVQGT-----WQPGR--GP--------CVLQEYEK 143 Query: 161 HKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ++N NL N ALL Q+ GIGN E L+R K+ P K R++++ Sbjct: 144 FRENVLQNLANKTFDKPICEALLEQRFFNGIGNYLRAEILYRLKIPPFEKARTVLE 199 >gi|253317167|ref|ZP_04840380.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 96 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 20/97 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--------------KNLRFDFPHHFSAATR 46 MPELPEVE ++R + + N + + K + D F + Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELD---TFKTLSE 57 Query: 47 GKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSF 80 G I +V RR+KY++ +L+ ++I HLGM+G F Sbjct: 58 GYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGF 94 >gi|317184406|gb|ADV15626.1| putative formamidopyrimidine DNA glycosylase [Candida orthopsilosis] Length = 394 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 75/257 (29%) Query: 47 GKKIIDVSRRAKYLLIEL--EG---NLSIIVHLGMSGSFIIEHTSC-------------- 87 G +I V R KY + L EG + +++H GM+G I + Sbjct: 57 GSRIDSVGRHGKYFWLRLTKEGVPKSSVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKIL 116 Query: 88 ---AKPIKN------------PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV---- 128 ++P K P+ + + L + K + + DPRR G + L+ Sbjct: 117 RELSEPKKEGVMKVEPDTEWPPRFSKFEMDLV--IDDFKLELSFVDPRRLGRVRLITDRK 174 Query: 129 -ETSLKY-QYPPLRTLGPEPADNS---------------------------FNAIYLTHQ 159 ET Q PPL LGP+ + + FN + L+ Sbjct: 175 AETDEGLLQLPPLDALGPDYSKSEVETKVSDFVFGDPDPHHHGRPRLDLRGFNELILS-- 232 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ-NNGTPKDILYKLI 218 K +K+ LL+Q AG+GN E L+ AKL P S I+ N+G ++ +L Sbjct: 233 ---KKKAIKSLLLDQAYFAGVGNWVGDEVLFHAKLHPNEIISSKIERNSGNINPVIERLY 289 Query: 219 QEIQKVLIDAIDAGGSS 235 + + V +A+ G S Sbjct: 290 ESLIYVCEEAVKCEGDS 306 >gi|310828563|ref|YP_003960920.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] gi|308740297|gb|ADO37957.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] Length = 277 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 112/294 (38%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGK----KIIDVSRR 56 M ELPE I L ++K + + +F F + A RG+ K+ + Sbjct: 1 MLELPESYTIAGQLDEIVKGKQIEQVVAGASPHKFAFFNGEPEACRGQLLGMKVDRATSY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ IE G+ +++ G++ ++ K P+ + + ++ + + +++ Sbjct: 61 GGYVEIEF-GDKRLLLGDGVNIRYLEAKE------KKPKKHQLLLTFEDES-----ALVF 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKKNSNLKNALLNQ 174 + E Y + P P FN + KKN++ K L + Sbjct: 109 SVAMYGAIWAYTEGENDNYYHQVAREKPSPLSGEFNWEWFEGIVAAAKKNTSAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+ A+++P K L + L +L ++ L GG Sbjct: 169 QRIPGLGNGCLQDILFNARVNPRTKLEYLTEEE------LSRLFDSVKATLHQMTVKGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G G +++ S PC CG I + G S +YC CQ Sbjct: 223 DTEK--DIFGMKGGYKSILSK-NTYKAPC-PVCGGAIVKEAYLGGSVYYCPNCQ 272 >gi|255727312|ref|XP_002548582.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] gi|240134506|gb|EER34061.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] Length = 286 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 44/229 (19%) Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM------------DLVETS---------L 132 P+ + + LT + + K + D RR G + DL+ T+ Sbjct: 54 PRFSKFDMELTKDDH--KIEFAFTDARRLGRIRLLKGEEVKTNEDLLNTAPLNALGPDYS 111 Query: 133 KYQYPPLRT----LGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKIVAGIGNIY 184 K + PP +T G D+ ++F+K K +K+ LL+Q AG+GN Sbjct: 112 KPEVPPKQTKPFVFGDPDPDHHGRPRLTIYEFNKLILSKKKPIKSLLLDQAFFAGVGNWV 171 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E +++A++ P + I N+G+ D ++ ++Q++ LI S + V ++G Sbjct: 172 GDEIVFQARIHPNEVISNKIANDGS--DDIHPVVQKLYDSLI-------SVCEEAVLVEG 222 Query: 245 SIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 F + + + G E + G + + GR++ YC QK Sbjct: 223 DTSKFPKNWLMLYRWGKGRKEKRKTPQGYSLDHVTVGGRTSCYCPDLQK 271 >gi|227501449|ref|ZP_03931498.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077474|gb|EEI15437.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 268 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 20/198 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRLQF-MTGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 ++ + + + HL M G++ I + + P H+ + + L ++ R I Sbjct: 53 FMQFDQTI-VHTHLKMEGTWAIHYA--GDRWRKPGHSARIVLQLAHSP-----RDIELVG 104 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVA 178 GF+D+ + + + LGP+ D ++ + + ++ ALL+QK+VA Sbjct: 105 HWLGFVDIFDADQYFSR--IAHLGPDILDPDWDREEAVRRLRARPERSIGTALLDQKVVA 162 Query: 179 GIGNIYVCEALWRAKLSP 196 GIGN Y E + A + P Sbjct: 163 GIGNEYRAEICFLAGVHP 180 >gi|227820771|ref|YP_002824741.1| UDP-glucose 4-epimerase protein [Sinorhizobium fredii NGR234] gi|227339770|gb|ACP23988.1| UDP-glucose 4-epimerase protein [Sinorhizobium fredii NGR234] Length = 344 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 24/222 (10%) Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 DV RA I E + +VH +GS ++ S AKP+ ++N T K Sbjct: 51 DVGDRAVLARIFAENEIDAVVHF--AGSAVVPE-SVAKPLAYYENN-----------TAK 96 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 R++ G V +S Y T PEP + +L + S L + + Sbjct: 97 TRMLIAATIEAGVRRFVFSSTAAVYGTQDT--PEPVKET---AWLRPESPYGRSKLMSEI 151 Query: 172 LNQKIVAGIGNIYVCEALWR-AKLSPI-RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 + Q A YV + A P+ R +S K + + +KV + Sbjct: 152 MLQDAAAAHDFSYVALRYFNVAGADPLGRAGQSTFGATHLIKVACEAALGKRRKVDVFGT 211 Query: 230 D---AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 D A G+ +RDY+H+ + +NA + GEP ++NCG Sbjct: 212 DYPTADGTGIRDYIHVSDLVAAHRNALDYLRRGGEPLVTNCG 253 >gi|194038635|ref|XP_001924578.1| PREDICTED: endonuclease 8-like 1 [Sus scrofa] Length = 389 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 46/184 (25%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIK 92 +H SA RGK++ + L L G L+++ GM+GSF + P Sbjct: 45 YHISALARGKEL-------RLTLSPLPGAQPPQEPLALVFRFGMTGSFQLVPRDALPP-- 95 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 H + + + + + D RRFG +L ++ P R GP Sbjct: 96 -----HAHLRFYTAPPSPQLALCFVDIRRFGRWEL-----GGEWDPGR--GP-------- 135 Query: 153 AIYLTHQFHKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 + L ++ ++N NL + ALL+Q+ GIGN E L R ++ P K R Sbjct: 136 CVLLEYEQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRAEILHRLRIPPFEKAR 195 Query: 202 SLIQ 205 ++++ Sbjct: 196 TVLE 199 >gi|332829519|gb|EGK02168.1| hypothetical protein HMPREF9455_01802 [Dysgonomonas gadei ATCC BAA-286] Length = 273 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 14/147 (9%) Query: 146 PADNSFNAIYLTHQFH--KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P + F+ Y F KK+ ++K L ++ + G+GN + + L++A L P RK ++ Sbjct: 138 PLADKFDRQYFDSIFSNVKKDMSVKALLATEQRIPGLGNGVLQDILFKAGLHPKRKISTI 197 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGG-SSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 ++ D+ + L +Q + D GG + +D+ G+ G ++ S P Sbjct: 198 --SDFERGDLFHCLKVTLQSM----TDKGGRDTEKDFY---GNFGGYKCLLSK-NTYKRP 247 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQK 289 C NCG I + G + +YC CQK Sbjct: 248 C-PNCGGEIVKEAYLGGTVYYCPSCQK 273 >gi|158333840|ref|YP_001515012.1| endonuclease VIII [Acaryochloris marina MBIC11017] gi|158304081|gb|ABW25698.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) [Acaryochloris marina MBIC11017] Length = 273 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 35/298 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + N + ++ +L+ + A +I V R K L Sbjct: 1 MPEGPEIRRAADRIASEIANQPLQEVWFAFSHLKI-----YEAQLGASQIQQVETRGKGL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 L+ + LSI H + G ++I K PQ + ++L + +K ++Y+ Sbjct: 56 LMHFDCGLSIYSHNQLYGKWMIR-----KAYNYPQTKRQLRLALHCD---RKSALLYSAS 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKI 176 +D+++ + +P L +GP+ + + + L LL+Q Sbjct: 108 D----IDVLDAAGIQAHPFLSRIGPDVLSSETTVEQVRERLSCDRFRRRRLTTLLLDQHF 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E L+ A++ P SL + T + I KL + + + + GG + Sbjct: 164 LAGLGNYLRSEILFVARVHP-----SLRPADCTDEQI-EKLAEAALALPRQSYETGG--I 215 Query: 237 RDYVHIDGSI---GYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + G+ + + V+ + G+ C C I + Q GR +YC CQ+ Sbjct: 216 TNDIAWAAKLKFQGFARRVYRHWVFARAGQLCWV-CATPIVKDAQGGRRYYYCPQCQE 272 >gi|297170783|gb|ADI21804.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_24M16] gi|297181570|gb|ADI17755.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_31E21] Length = 261 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 13/148 (8%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 +GP+ + + ++ K + +++Q ++AGIGNIY E LWR ++ P Sbjct: 122 IGPDVLRSGSDPELAFNRIKKSKLPIGRLIMDQSVMAGIGNIYRSEILWRQRVHP----- 176 Query: 202 SLIQNNGTPKDIL-YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 + G D L + I KVL+ AI +++ S ++ +++ K Sbjct: 177 ---ETPGNKIDRLTFDRIWNDAKVLL-AIGVKRNAIITVDDAGLSKTKYKERVNIFSKDN 232 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 P C IR R TF C CQ Sbjct: 233 CP---KCKGKIRSFKINARRTFVCEICQ 257 >gi|41053628|ref|NP_956577.1| endonuclease VIII-like 1 [Danio rerio] gi|29612540|gb|AAH49408.1| Zgc:56361 [Danio rerio] Length = 437 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 42/182 (23%) Query: 43 AATRGKKII--------DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 A +RGK++ D S + K + + ++++ GMSG F + P Sbjct: 49 AQSRGKEVRLTLTPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSLD-----ELP 103 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H H+ TN T + + + D RRFG + K + P I Sbjct: 104 KHAHLRF-YTNET--PHWVLSFEDTRRFGSWQPNGSWQKNRGP---------------CI 145 Query: 155 YLTHQFHKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 ++ ++N SNL + ALLNQK GIGN E L+R ++ P K R++ Sbjct: 146 MFEYESFRENVLSNLSDKAFDKPICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKARTV 205 Query: 204 IQ 205 ++ Sbjct: 206 LE 207 >gi|49257706|gb|AAH74457.1| LOC443713 protein [Xenopus laevis] Length = 323 Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 54/227 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-----DICLHRKNLRFDFPHH-FSAATRGKKIIDVS 54 MPE PE+ + V K ++ ++ F P + S+ +RGK++ Sbjct: 1 MPEGPELHRASLFVNKVCKGLSFAGAVEKSAVSKNTDVPFSCPEYTISSVSRGKEV---- 56 Query: 55 RRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K +L L I+ GMSGSF + P+H H+ T Sbjct: 57 ---KLILTPLSDESEETHIVFRFGMSGSFKFTPQD-----QIPKHAHLRFY----TKDSP 104 Query: 112 YRVI-YNDPRRFGFMDL------------VETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 RV+ + DPRRFG ++ ++ K++ L+ L +D +F+ Sbjct: 105 QRVLCFVDPRRFGTWEVHGSWQPERGPCVIQEYEKFRENVLKNL----SDKAFD------ 154 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + +LNQK GIGN E L+R ++ P RS+++ Sbjct: 155 ------KPICEVMLNQKYFNGIGNYLRAEILFRLEIPPFTPARSVLE 195 >gi|300867972|ref|ZP_07112611.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300333993|emb|CBN57789.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 77 Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + + + D+ L F F A +GK I RR K Sbjct: 1 MPELPEVETICRGLNQLTLGLEILGGDVLLENTIASPFFARDFLAGLQGKAIARWHRRGK 60 Query: 59 YLLIEL 64 YLL EL Sbjct: 61 YLLAEL 66 >gi|311272274|ref|XP_001926185.2| PREDICTED: endonuclease 8-like 3 [Sus scrofa] Length = 596 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 28/128 (21%) Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 L + L++QK++ G+GNI EAL+ + L P K L L K+I + + Sbjct: 179 LCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQ---THHLVKMIHDFSILFY 235 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRST 281 AG + + Y VY + NCGQ + R+ + R T Sbjct: 236 RCCKAGSAVSKHY--------------KVYKR------PNCGQCFCKITVCRLGENNRMT 275 Query: 282 FYCTYCQK 289 ++C +CQK Sbjct: 276 YFCPHCQK 283 >gi|196001059|ref|XP_002110397.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] gi|190586348|gb|EDV26401.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] Length = 408 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 28/146 (19%) Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN--DPRRFGFM 125 + I+ GMSGSF + + P+H+H+ N K ++ N DPRRFG Sbjct: 87 MRILFGFGMSGSFSVTDSDNI-----PKHSHLRFYAHN-----KSSMVLNFVDPRRFGTW 136 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKN-----ALLNQKIVAG 179 + + P R GP D +F ++ + N++L N LL+QK G Sbjct: 137 RVTNN-----WSPNR--GP---DAAFEYELFCNNIASHLNASLFNKPICEVLLDQKYFNG 186 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQ 205 IGN E L+RA + P R++ Sbjct: 187 IGNYLRAEILYRAGIPPFTMARNVFD 212 >gi|302554566|ref|ZP_07306908.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472184|gb|EFL35277.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 99 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T R +LR P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQTARRLHDALAGKVLT-----RSDLRV--PRFATADITGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFII 82 L +EG L++ HL M G++ + Sbjct: 54 LTRVEGGLTLHSHLRMDGAWKV 75 >gi|326789510|ref|YP_004307331.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] gi|326540274|gb|ADZ82133.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] Length = 275 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 38/298 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + L + ++ + K +F + P ++AA +G ++I V Sbjct: 1 MLELPEVLTVSKQLKNHIVGKKISKVLPPSKVHKFCWYNGEPTEYNAAIKGSEVISVEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I + ++ G++ + + KN Q + I L +N V+ Sbjct: 61 GIFVEITFSNGYKLCLNDGVN----VRLVPSNEKTKNFQ---LLIELEDNL------VLV 107 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK------NSNLKNA 170 +G + L + S +Y L + A + F+ ++ H +HK N + K Sbjct: 108 FTVAMYGGIFLHDGSYDNEY----YLKSKQAISPFSEVFTEH-YHKTFMESKPNLSAKAF 162 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L Q+ G+GN + L+ A + P RK + + + +L+ ++ VL + + Sbjct: 163 LATQQRFPGVGNGVSQDILFEAGIHPKRKISTFSEADKE------RLLGKMITVLNEMVQ 216 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG +I G G ++ S G C CG I + G S +YC CQ Sbjct: 217 KGGRDTEK--NIFGEKGGYKVRMS-KNTMGLDC-PKCGGKIIKETYLGGSIYYCAQCQ 270 >gi|306834658|ref|ZP_07467747.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] gi|304569461|gb|EFM44937.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] Length = 268 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 20/198 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRLQF-MAGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 ++ + + + HL M G++ I + + P H+ + + L ++ R I Sbjct: 53 FMQFDQTI-VHTHLKMEGTWAIHYA--GDRWRKPGHSARIVLQLAHSP-----RDIELVG 104 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVA 178 GF+D+ + + + LGP+ D ++ + + ++ ALL+QK VA Sbjct: 105 HWLGFVDIFDADQYFSR--INHLGPDILDPDWDREEAVRRLRARPERSIGTALLDQKAVA 162 Query: 179 GIGNIYVCEALWRAKLSP 196 GIGN Y E + A + P Sbjct: 163 GIGNEYRAEICFLAGVHP 180 >gi|134023849|gb|AAI35400.1| LOC100124806 protein [Xenopus (Silurana) tropicalis] Length = 322 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 23/178 (12%) Query: 32 NLRFDFPHH-FSAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSGSFIIEHTSC 87 ++ F+ P + S+ +RGK++ K +L L II GMSGSF Sbjct: 37 DVPFNCPEYTISSVSRGKEV-------KLILTPLSDGSEETHIIFRFGMSGSFKF----- 84 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 P + P+H H+ + + + + DPRRFG +V S + + P E Sbjct: 85 TPPDQIPKHAHLRFY---TKDAPCHVLCFVDPRRFGTW-VVHGSWQPERGPCVMQEYEKF 140 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + + F K + +LNQK GIGN E L+R + P RS+++ Sbjct: 141 RENVLKNLSDNVFDKP---ICEVMLNQKYFNGIGNYLRAEILFRLAIPPFIPARSVLE 195 >gi|109076256|ref|XP_001090459.1| PREDICTED: nei endonuclease VIII-like 3 [Macaca mulatta] Length = 602 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 52/235 (22%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-----TNTKKYRVIYNDPR 120 G + +H GM GS +I C KN + + LT + ++ + R R Sbjct: 85 GPKAFRIHFGMKGSIMINPLECK--YKNGASPVLEVQLTKDLICFFDSSVELRNSMESQR 142 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R G M L PE F+ + ++ K K L + L++Q ++ G Sbjct: 143 RVGMMK-----------ELDVCSPE-----FSFLRAENEVKKQKGRMLGDVLMDQNVLPG 186 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI EAL+ + L P K L L K+I++ + AG + + Y Sbjct: 187 VGNIIKNEALFDSGLHPAVKVCQLTDEQ---THHLVKMIRDFSILFYRCRKAGLAVSKHY 243 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV-----QAGRSTFYCTYCQK 289 VY + NCGQ RI R T++C CQK Sbjct: 244 --------------KVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPRCQK 278 >gi|194226547|ref|XP_001492738.2| PREDICTED: similar to nei endonuclease VIII-like 3 (E. coli) [Equus caballus] Length = 606 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 28/133 (21%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K L + L++QK++ G+GNI EAL+ + L P K L L K+I++ Sbjct: 173 QKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQ---THHLVKMIRDC 229 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQ 276 + AG + R Y VY + NCGQ + R+ + Sbjct: 230 SILFYKCRKAGCAISRHY--------------KVYKR------PNCGQCCCKITVCRLGE 269 Query: 277 AGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 270 NHRMTYFCPHCQK 282 >gi|146423146|ref|XP_001487505.1| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 44/215 (20%) Query: 108 NTKKYRVIYNDPRRFGFMDLV--ET----SLKYQYPPLRTLGPE-----PADNSFNAIY- 155 N + + + DPRR G + L+ ET L + PL++LGP+ + +Y Sbjct: 119 NGEVIELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKLAEGKTTDKFVYG 178 Query: 156 ------------LTHQFHK----KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 L +F+ K +K+ LL Q++ +G+GN E ++ A+L P Sbjct: 179 DPDPHHHGRPRLLLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHPNEV 238 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV---- 255 S I N+G + ++I+E+ LI + V ++G + F + + + Sbjct: 239 ISSKISNDGN----VSQVIKELYNALIYVCEY-------CVSVEGEVTQFPDNWLMPYRW 287 Query: 256 -YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ E + G + GR++ + QK Sbjct: 288 GKGRKQEKSKTKEGYQVDHGTVGGRTSCFVPELQK 322 >gi|255536224|ref|YP_003096595.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] gi|255342420|gb|ACU08533.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] Length = 244 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 23/143 (16%) Query: 150 SFNAIYLTHQFHKKNSN--LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +F+ Y+ +K + + +AL++Q + G+GNI E+L+RAK+ P S+I+N Sbjct: 119 TFDGEYVLSTLQEKYAEKMIGDALMDQDLFTGVGNIIRVESLYRAKIHP----ESVIRN- 173 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 P+ KL+ I+ V+ A + S D V + +YGK + C + Sbjct: 174 -IPEK---KLVFLIETVVNYAYEFLEQSKEDTV---------KEKTLIYGK--KICPKDK 218 Query: 268 GQM-IRRIVQAGRSTFYCTYCQK 289 ++ I + + R T+ C CQK Sbjct: 219 WELIIEEMGKVKRKTYVCPKCQK 241 >gi|73979610|ref|XP_532852.2| PREDICTED: similar to Endonuclease VIII-like 3 (Nei-like 3) (DNA glycosylase FPG2) [Canis familiaris] Length = 771 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 51/264 (19%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D +FS G V K LL+ G ++ +H GM GS +I P++N Sbjct: 228 DSSQNFSRLLNGCVYCGVQTLGKELLMYF-GPKALRIHFGMKGSIMIN------PLENKN 280 Query: 96 HNHVT----ISLTNN-----TNTKKYRVIYNDPRRFGFMDLVE-TSLKYQYPPLRTLGPE 145 N V+ I LT + ++ ++R +R M+ ++ S K+ + Sbjct: 281 KNGVSPVLEIQLTKDLICFFDSSVEFRNSAESQQRVRMMEELDVCSPKFSF--------- 331 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + + +K L + L++Q+++ G+GNI EAL+ + L P K L Sbjct: 332 -------SRAESEVKKQKGRMLCDVLMDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLTD 384 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 L K+I++ +L GS + + + VY K C Sbjct: 385 EQ---THYLVKMIRDFS-ILFYRCRKTGSVISKH-------------YKVY-KRPNCCQC 426 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQK 289 C + R+ + R T++C CQK Sbjct: 427 CCKITVCRLGENNRMTYFCPRCQK 450 >gi|325914892|ref|ZP_08177226.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325916329|ref|ZP_08178607.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537500|gb|EGD09218.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325538895|gb|EGD10557.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 275 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 47/247 (19%) Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 +K++ + K+ LIE S+ +H + GS+ I KP P+ +SL + Sbjct: 64 QKVLALRSWGKHFLIEC-AQFSVRIHFLLFGSYRINED---KPNAVPR-----LSLEFSK 114 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---- 163 + ++ S+++ PL + AD N ++ Q +K Sbjct: 115 GER--------------LNFYACSVQFIERPLDEVYDWTAD-VMNPLWDAAQARRKLRAA 159 Query: 164 -NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +ALL+Q I AG+GNI E L R ++ P + +L P L +L+ + + Sbjct: 160 PGMLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESEVGAL------PARKLGELVTQAR 213 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + D + + + + V+ KT P Q + + +AGR F Sbjct: 214 EYSFDFYTWKKAFV------------LKKHYQVHTKTSCPRDGTPLQYRKHLGKAGRRAF 261 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 262 FCEVCQR 268 >gi|89893499|ref|YP_516986.1| hypothetical protein DSY0753 [Desulfitobacterium hafniense Y51] gi|89332947|dbj|BAE82542.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 349 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 67/293 (22%), Positives = 108/293 (36%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + R L +KN + + K +F + P + A G +I Sbjct: 69 MLELPEVLTLVRQLNESVKNRRIRKVWPPTKAHKFCWYNGEPEEYDKALSGSRIAGAEGF 128 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + + V+ G++ + K P + + + L + +Y Sbjct: 129 GTFAELIFDNGRKLCVNDGVNLRLMPAG-------KVPGNYQLMMELDDGQALVFTVAMY 181 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL-THQFHKKNSNLKNALLNQK 175 G + + + Y R P F A YL K + K L ++ Sbjct: 182 G-----GIFEHDGSYDNHYYLASRN-STSPFAQDFPAYYLRLFSESKPTLSAKAFLATEQ 235 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + + L+ A + P RK +L Q +D KL+Q + KVL D GG Sbjct: 236 RFPGIGNGTLQDILFEAGIHPKRKIGTLEQWE---RD---KLLQAVMKVLNDMTKHGGRD 289 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S G C CG I + G S ++C CQ Sbjct: 290 TEK--DLFGVFGGYKTKMS-KNTAGTNC-GQCGGTILKENYLGGSVYFCPECQ 338 >gi|126331299|ref|XP_001371089.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 635 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 28/133 (21%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K+ L + L++Q ++ GIGNI EAL+ + L P K L L K+I++ Sbjct: 179 QKDRMLCDVLMDQNVLPGIGNIIKNEALFDSGLHPAVKVSQLKDEQ---THHLVKMIRDF 235 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQ 276 + G + R Y VY + S+CGQ + R+ + Sbjct: 236 TIFFYECRKTGAALYRHY--------------KVYKR------SDCGQCSSKITVCRLGE 275 Query: 277 AGRSTFYCTYCQK 289 R T++C CQK Sbjct: 276 NNRMTYFCPRCQK 288 >gi|190344984|gb|EDK36784.2| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 54/220 (24%) Query: 108 NTKKYRVIYNDPRRFGFMDLV--ET----SLKYQYPPLRTLGPEPADNS----------- 150 N + + + DPRR G + L+ ET L + PL++LGP+ + ++ Sbjct: 119 NGEVIELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKSAEGKTTDKFVYG 178 Query: 151 ----------------FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 FN + L K +K+ LL Q++ +G+GN E ++ A+L Sbjct: 179 DPDPHHHGRPRLSLQEFNDLVLL-----KKKPIKSMLLEQELFSGVGNWVADEIIYHARL 233 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P S I N+G + ++I+E+ LI + V ++G + F + + Sbjct: 234 HPNEVISSKISNDGN----VSQVIKELYNALIYVCEY-------CVSVEGEVTQFPDNWL 282 Query: 255 V-----YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ E + G + GR++ + QK Sbjct: 283 MPYRWGKGRKQEKSKTKEGYQVDHGTVGGRTSCFVPELQK 322 >gi|300871565|ref|YP_003786438.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] gi|300689266|gb|ADK31937.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] Length = 217 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 29/230 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELP + NL+ +K +IC N + D + +G+KIIDV R Sbjct: 1 MKELPYL----INLINALKG----EICYSYINNVVALDKKYKELEEVKGQKIIDVLRHGG 52 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y+ + + +++V LG GSF++ + K N + T+N N + V+ Sbjct: 53 YMHFQFSQD-AMLVDLGSGGSFVLTENNTYK-------NAIIKLETDNGN---FFVVDES 101 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + ++ Y P +G +P FN + ++ + N I++ Sbjct: 102 KDKDDATHIIPIWKDYTTMP--QVGYDPLTKQFNYNLFCQLLADNATTVEKLIKNPLIIS 159 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 GIG+ Y L RA ++ ++T++ N ++I I++VL +A Sbjct: 160 GIGDTYGDMILKRASIT--KRTKTTDINKAKAREIF----DAIKQVLREA 203 >gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera] Length = 758 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 1 MPELPEVEIIRRNLM--MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + V K +T I K + P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELE 65 + ++L+ Sbjct: 61 NMWLQLD 67 >gi|326926420|ref|XP_003209398.1| PREDICTED: hypothetical protein LOC100547430 [Meleagris gallopavo] Length = 446 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 24/37 (64%) Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ALLNQK GIGN E L+RAK+ P K R++++ Sbjct: 219 EALLNQKYFNGIGNYLRAEILYRAKIPPFEKARTVLE 255 >gi|302842791|ref|XP_002952938.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] gi|300261649|gb|EFJ45860.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] Length = 686 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 LGP+P + L + + + L++Q +VAG+GNIY E L++A + P Sbjct: 62 LGPDPLREDADKELLRAKVARSRKPIGLVLMDQSMVAGVGNIYRAEILFKAGVHP 116 >gi|159472486|ref|XP_001694382.1| hypothetical protein CHLREDRAFT_103375 [Chlamydomonas reinhardtii] gi|158277045|gb|EDP02815.1| predicted protein [Chlamydomonas reinhardtii] Length = 199 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 LG +P + L + K ++ L++Q ++AG+GNIY E L++A++ P Sbjct: 129 LGQDPLREDADKEVLWAKVQKSKKSIGLVLMDQTLIAGVGNIYRAEILYKARVHP 183 >gi|224061749|ref|XP_002195293.1| PREDICTED: nei endonuclease VIII-like 1 [Taeniopygia guttata] Length = 379 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 29/123 (23%) Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 P+H H+ LT + + + + DPRRFG L + + P R GP Sbjct: 76 PRHAHLRF-LTRESPPRA--LCFVDPRRFGSWRLGDA-----WQPER--GP--------C 117 Query: 154 IYLTHQFHKKN--SNLKN---------ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 + +Q ++N NL + LLNQK GIGN E L+R K+ P K R+ Sbjct: 118 VVSEYQAFRENVLKNLDDRAFDKPICEVLLNQKYFNGIGNYLRAEILYRLKIPPFEKART 177 Query: 203 LIQ 205 +++ Sbjct: 178 VLE 180 >gi|296195124|ref|XP_002745242.1| PREDICTED: endonuclease VIII-like 3 [Callithrix jacchus] Length = 606 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 28/133 (21%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K L + L++Q + G+GNI EAL+ + L P K L ++ L++ I Sbjct: 173 QKGRMLGDVLMDQSVFPGVGNIIKNEALFDSALHPAVKVCQLTDGQ------IHHLVKMI 226 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV-----Q 276 + I + L H F VY + SNCGQ RI Sbjct: 227 RDFSILFYRCRKAGLAVSKH-----------FKVYKR------SNCGQCHGRITVCRFGD 269 Query: 277 AGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 270 NNRMTYFCPHCQK 282 >gi|160774311|gb|AAI55158.1| Neil3 protein [Danio rerio] Length = 568 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 28/127 (22%) Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 L + LL+Q ++ G+GNI EAL+ + L+P K L L K+ ++ +L Sbjct: 155 LCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQ---VHHLVKMTRDF-TLLF 210 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRST 281 GS L Y H + VY + NCGQ + R+ GR T Sbjct: 211 YKCRKNGSPL--YKH-----------YKVYKR------PNCGQCSGTVTVCRLGDNGRMT 251 Query: 282 FYCTYCQ 288 +YC CQ Sbjct: 252 YYCQRCQ 258 >gi|55925237|ref|NP_001007336.1| endonuclease VIII-like 3 [Danio rerio] gi|55250345|gb|AAH85550.1| Nei endonuclease VIII-like 3 (E. coli) [Danio rerio] gi|182888832|gb|AAI64271.1| Neil3 protein [Danio rerio] Length = 550 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 28/127 (22%) Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 L + LL+Q ++ G+GNI EAL+ + L+P K L L K+ ++ +L Sbjct: 155 LCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQ---VHHLVKMTRDF-TLLF 210 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRST 281 GS L Y H + VY + NCGQ + R+ GR T Sbjct: 211 YKCRKNGSPL--YKH-----------YKVYKR------PNCGQCSGTVTVCRLGDNGRMT 251 Query: 282 FYCTYCQ 288 +YC CQ Sbjct: 252 YYCQRCQ 258 >gi|213581866|ref|ZP_03363692.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 63 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLS-DTPVLSVQRRAKYL 59 Query: 61 LIEL 64 L+EL Sbjct: 60 LLEL 63 >gi|167746192|ref|ZP_02418319.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] gi|167654185|gb|EDR98314.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] Length = 273 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 28/246 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+K++D + I EG+L + + G++ E + P + I ++ Sbjct: 51 GRKVVDAQGFGIFAEIIFEGDLRVCFNDGVNVRIFGEGDNI------PGKYQLRIDFSDG 104 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T V+ +G + + S +Y + P F+ Y N Sbjct: 105 T------VLVFTVAMYGSIACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAKPN 158 Query: 167 L--KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L K L ++ + G+GN + + L+ A + P +K S ++ K++L+ I+E+ Sbjct: 159 LSAKAFLATKQRIPGLGNGVLQDILFEAGIHPKKKIGSFTEHE---KELLFVSIKEVLSE 215 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++ G + +D + G+ G ++ S Y K G P CG I + G + + Sbjct: 216 MVRL--RGRDTEKD---LWGNPGGYKTKLSKNTY-KDGCP---KCGGEITKAAYLGGTVY 266 Query: 283 YCTYCQ 288 +C CQ Sbjct: 267 FCPECQ 272 >gi|317473256|ref|ZP_07932552.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] gi|316899250|gb|EFV21268.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] Length = 273 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 28/246 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G+K++D + I EG+L + + G++ E + P + I ++ Sbjct: 51 GRKVVDAQGFGIFAEIIFEGDLRVCFNDGVNVRIFGEGDNI------PGKYQLRIDFSDG 104 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T V+ +G + + S +Y + P F+ Y N Sbjct: 105 T------VLVFTVAMYGSIACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAKPN 158 Query: 167 L--KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L K L ++ + G+GN + + L+ A + P +K S ++ K++L+ I+E+ Sbjct: 159 LSAKAFLATKQRIPGLGNGVLQDILFEAGIHPKKKIGSFTEHE---KELLFVSIKEVLSE 215 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++ G + +D + G+ G ++ S Y K G P CG I + G + + Sbjct: 216 MVRL--RGRDTEKD---LWGNPGGYKTKLSKNTY-KDGCP---KCGGEITKAAYLGGTVY 266 Query: 283 YCTYCQ 288 +C CQ Sbjct: 267 FCPECQ 272 >gi|50555437|ref|XP_505127.1| YALI0F07623p [Yarrowia lipolytica] gi|49650997|emb|CAG77934.1| YALI0F07623p [Yarrowia lipolytica] Length = 446 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 17/123 (13%) Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDL---VETSLKYQYPPLRTLGPE----PADNSF 151 V + LT TK + + D RR + L E Y+ P++ LGP+ P D Sbjct: 162 VKMDLTLEDGTK---LAFYDARRLARVKLFTIAEPLDIYKVDPMKKLGPDYSKSPDDEHT 218 Query: 152 NAIY-------LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 A + K + +K+ LL+Q + +G+GN E L+ +++ P R L+ Sbjct: 219 PAALKPLDLDAFKAKIQAKKAPIKSVLLDQSLFSGVGNWVADEILYHSRVHPARMCNLLL 278 Query: 205 QNN 207 ++ Sbjct: 279 ESQ 281 >gi|156374930|ref|XP_001629836.1| predicted protein [Nematostella vectensis] gi|156216845|gb|EDO37773.1| predicted protein [Nematostella vectensis] Length = 290 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 27/150 (18%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--YNDPRRFG 123 G+L I+ GMSG F P+ + H H ++ T K ++ + D RRFG Sbjct: 77 GDLRILFRFGMSGRFQF------GPV-DEMHKHAHLNFYTKTEKKDKGLVLSFVDVRRFG 129 Query: 124 FMDLVETSLKYQYPPLRTLGPEPA-------DNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + +T + + GP+P +N N + + F+K L L NQ+ Sbjct: 130 GWQVKDTWSEDR-------GPDPMFEYQAFRENVLNNL-DSSVFNKP---LCEVLHNQRY 178 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 GIGN E ++R+ + P R ++++ Sbjct: 179 FNGIGNYLRAEIIFRSGIPPFTCARDVLES 208 >gi|118090127|ref|XP_426306.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 611 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 58/235 (24%) Query: 69 SIIVHLGMSGSFII-----EHTSCAKPIKNPQHNHVTISLTNNT-----NTKKYRVIYND 118 ++ +H GM+GS I + S A P+ + I LT +T T +YR + Sbjct: 131 ALRIHFGMNGSMRINPDGRQDRSGALPV-------LEIRLTEDTICFFEVTAEYRNVTEC 183 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 +R M+ SL P L E + +K L + LL+Q+++ Sbjct: 184 EQRVRMME----SLDVCSPKFSFLRAE-----------SEVKQQKTRMLCDVLLDQRVLP 228 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQEIQKVLIDAIDAGGSSL 236 G+GNI EAL+ + L P K L T + I L K+ ++ +L GS L Sbjct: 229 GVGNIIKNEALFDSGLHPAAKVCQL-----TDEHIRHLVKMTRDF-TLLFYKCRKTGSPL 282 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR--RIVQAGRSTFYCTYCQK 289 Y H + VY + + C S C + I R+ + R T++C+ CQK Sbjct: 283 --YKH-----------YKVYRR--QTC-SQCNEKITVCRLGENNRMTYFCSRCQK 321 >gi|77735931|ref|NP_001029662.1| endonuclease 8-like 3 [Bos taurus] gi|114152087|sp|Q3MHN7|NEIL3_BOVIN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 gi|75775280|gb|AAI05169.1| Nei endonuclease VIII-like 3 (E. coli) [Bos taurus] Length = 606 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++QK++ G+GNI EAL+ + P K L T + I L K+I+ Sbjct: 174 QKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQL-----TDEQIHHLVKMIR 228 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRI 274 + G + + Y VY + NCGQ + R+ Sbjct: 229 NFSILFYRCCKVGSALSKHY--------------KVYKRP------NCGQCCCKITVCRL 268 Query: 275 VQAGRSTFYCTYCQK 289 + R T++C +CQK Sbjct: 269 GENNRMTYFCPHCQK 283 >gi|296472464|gb|DAA14579.1| endonuclease VIII-like 3 [Bos taurus] Length = 606 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++QK++ G+GNI EAL+ + P K L T + I L K+I+ Sbjct: 174 QKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQL-----TDEQIHHLVKMIR 228 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRI 274 + G + + Y VY + NCGQ + R+ Sbjct: 229 NFSILFYRCCKVGSALSKHY--------------KVYKRP------NCGQCCCKITVCRL 268 Query: 275 VQAGRSTFYCTYCQK 289 + R T++C +CQK Sbjct: 269 GENNRMTYFCPHCQK 283 >gi|281332206|ref|NP_001163817.1| endonuclease VIII-like 3 [Rattus norvegicus] Length = 606 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +++ L + LL+Q+++ G+GNI EAL+ + L P K + Q + L K+ ++ Sbjct: 173 QRDRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPTVK---VCQLSDKQAHHLVKMTRDF 229 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR--RIVQAGR 279 + AG + + Y VY + P + C IR R+ + R Sbjct: 230 SILFYRCRKAGSAISKHY--------------KVYKR---PNCAQCHCKIRVCRLGENSR 272 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 273 MTYFCPHCQK 282 >gi|316973988|gb|EFV57529.1| putative fibronectin type III domain protein [Trichinella spiralis] Length = 4500 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 14/75 (18%) Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK--------------KYRVIYNDPR 120 G+SG + HT C KP PQ+ HV TNN + K Y + +++ Sbjct: 2924 GLSGPELQTHTLCGKPSMAPQNVHVEADRTNNVHLKWEAVPKQAWHCSNVSYVIKFHNST 2983 Query: 121 RFGFMDLVETSLKYQ 135 G++DL T +Y+ Sbjct: 2984 HSGYVDLSSTKTEYK 2998 >gi|7023157|dbj|BAA91860.1| unnamed protein product [Homo sapiens] Length = 605 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 172 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 227 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 266 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 GDNNRMTYFCPHCQK 281 >gi|83699625|gb|ABC40719.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 606 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 173 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 227 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 228 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 267 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 268 GDNNRMTYFCPHCQK 282 >gi|22004059|dbj|BAC06479.1| hypothetical protein [Homo sapiens] gi|119625121|gb|EAX04716.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 172 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 227 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 266 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 GDNNRMTYFCPHCQK 281 >gi|19684059|gb|AAH25954.1| Nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 172 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 227 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 266 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 GDNNRMTYFCPHCQK 281 >gi|114596997|ref|XP_526741.2| PREDICTED: endonuclease 8-like 3 [Pan troglodytes] Length = 606 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 173 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 227 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 228 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 267 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 268 GDNNRMTYFCPHCQK 282 >gi|255010489|ref|ZP_05282615.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313148296|ref|ZP_07810489.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313137063|gb|EFR54423.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] Length = 279 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 15/149 (10%) Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 P+ ++F+ Y + ++ K+A L ++ + G+GN + + L+ A + P K Sbjct: 139 PQVMSDAFDKEYFLGLVNAPDAQKKSAKAFLATEQTIPGLGNGVLQDILYHAHIHPKTKI 198 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKT 259 L K+ +Y +++++ L D GG S D + G Q S+ T Sbjct: 199 DKL---GAEEKEKMY---EQVKETLQDIYRLGGRSTETDLFGVPG-----QYVASLSKNT 247 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 CG+ I + G S +YC CQ Sbjct: 248 AGHACPKCGETIVKENYLGGSIYYCRGCQ 276 >gi|332255198|ref|XP_003276719.1| PREDICTED: endonuclease 8-like 3 [Nomascus leucogenys] Length = 606 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 28/133 (21%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ Sbjct: 173 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVFQLTDEQ---THHLVKMIRDF 229 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQ 276 + AG + + Y VY + NCGQ + R Sbjct: 230 SILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRVTVCRFGD 269 Query: 277 AGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 270 NNRMTYFCPHCQK 282 >gi|302393810|sp|Q8TAT5|NEIL3_HUMAN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase FPG2; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 Length = 605 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 172 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 227 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 266 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 GDNNRMTYFCPHCQK 281 >gi|157388969|ref|NP_060718.2| endonuclease 8-like 3 [Homo sapiens] Length = 605 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI--LYKLIQ 219 +K L + L++Q ++ G+GNI EAL+ + L P K L T + I L K+I+ Sbjct: 172 QKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQL-----TDEQIHHLMKMIR 226 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV---- 275 + + AG + + Y VY + NCGQ RI Sbjct: 227 DFSILFYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRF 266 Query: 276 -QAGRSTFYCTYCQK 289 R T++C +CQK Sbjct: 267 GDNNRMTYFCPHCQK 281 >gi|4530605|gb|AAD22113.1| capsid protein [Human papillomavirus type 16] Length = 505 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E +I H G SG + H PIK P +N + + + + +R+ DP +F Sbjct: 26 EYVARTNIYYHAGTSGLLAVGHPYF--PIKKPNNNKILVPKVSGLQYRVFRIYLPDPNKF 83 Query: 123 GFMD 126 GF D Sbjct: 84 GFPD 87 >gi|301778739|ref|XP_002924787.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 3-like [Ailuropoda melanoleuca] Length = 603 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 18/128 (14%) Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ Sbjct: 174 QKGRMLCDVLMDQIVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQ---THYLVKMIRDF 230 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 S L H GS+ + VY K C C + R+ + R T Sbjct: 231 ------------SILFYRCHKTGSV--ISKHYKVY-KRPNCCQCCCKITVCRLGENNRMT 275 Query: 282 FYCTYCQK 289 ++C CQK Sbjct: 276 YFCPRCQK 283 >gi|114658220|ref|XP_001143944.1| PREDICTED: similar to NEIL1 protein isoform 6 [Pan troglodytes] Length = 288 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 23/37 (62%) Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ALL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 61 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLE 97 >gi|150395395|ref|YP_001325862.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] gi|150026910|gb|ABR59027.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] Length = 342 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 ID A G+ +RDY+H+ + ++A + GEP ++NCG Sbjct: 211 IDYPTADGTGVRDYIHVSDLVAAHRSALAYLRMGGEPLVTNCG 253 >gi|29349896|ref|NP_813399.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29341807|gb|AAO79593.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 279 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 13/148 (8%) Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 P+ ++F+ Y + +++ K+A L ++ V G+GN + + L+ A + P +K Sbjct: 139 PQVMSDAFSKEYFLGLINDESAQKKSAKAFLATEQTVPGLGNGVLQDILYHAHIHPKKKI 198 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 +L +++ Y ++++ + D GG + + G G + S G Sbjct: 199 AALTDKE--KENLFY----QVKETMNDIYRQGGRNTES--DLFGENGKYTACLSK-DTAG 249 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + C CG+ I + G S +YC CQ Sbjct: 250 KAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|307320125|ref|ZP_07599545.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] gi|306894171|gb|EFN24937.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] Length = 342 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 40/255 (15%) Query: 52 DVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 DV RA + E + +VH +GS ++ S A P+ ++N T NT T Sbjct: 51 DVGDRAMLQRVFAENEIDSVVHF--AGSAVVPE-SVANPLAYYENN------TANTRTLI 101 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + R F F +S Y T P+P + L Q S L + + Sbjct: 102 AATVEAGIRHFVF-----SSTAAVYGTQDT--PDPVSET---AALRPQSPYGRSKLMSEM 151 Query: 172 LNQKIVAGIG---------NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + Q A N+ + L RA S + T LI+ + ++I Sbjct: 152 MLQDAAAAHDFRFVALRYFNVAGADPLGRAGQSTLGATH-LIK---VACEAALGRRRKID 207 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG--------QMIRRI 274 + D A G+ +RDY+H+ + ++A + GEP ++NCG Q++ + Sbjct: 208 VLGTDYPTADGTGVRDYIHVSDLVAAHRSALAYLRAGGEPLVANCGYGHGFSVLQVLDTV 267 Query: 275 VQAGRSTFYCTYCQK 289 Q F Y + Sbjct: 268 RQVSGRDFMVDYAPR 282 >gi|15964309|ref|NP_384662.1| UDP-glucose 4-epimerase protein [Sinorhizobium meliloti 1021] gi|307307045|ref|ZP_07586784.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] gi|15073486|emb|CAC45128.1| Probable UDP-glucose 4-epimerase [Sinorhizobium meliloti 1021] gi|306901985|gb|EFN32584.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] Length = 342 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG--------QMIRRIVQAGRSTF 282 A G+ +RDY+H+ + ++A + GEP ++NCG Q++ + Q F Sbjct: 216 ADGTGVRDYIHVSDLVAAHRSALAYLRAGGEPLVANCGYGHGFSVLQVLDTVRQVSGRDF 275 Query: 283 YCTYCQK 289 Y + Sbjct: 276 MVDYAPR 282 >gi|253569736|ref|ZP_04847145.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] gi|251840117|gb|EES68199.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] Length = 279 Score = 35.4 bits (80), Expect = 10.0, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 13/148 (8%) Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNA---LLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 P+ ++F+ Y + +++ K+A L ++ V G+GN + + L+ A + P +K Sbjct: 139 PQVMSDAFSKEYFLGLINDESAQKKSAKAFLATEQTVPGLGNGVLQDILYHAHIHPKKKI 198 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 +L +++ Y ++++ + D GG + + G G + S G Sbjct: 199 AALTDKE--KENLFY----QVKETMNDIYRQGGRNTES--DLFGENGKYTACLSK-DTAG 249 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + C CG+ I + G S +YC CQ Sbjct: 250 KAC-PRCGETIVKENYLGGSIYYCRGCQ 276 Searching..................................................done Results from round 2 >gi|254780625|ref|YP_003065038.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] gi|254040302|gb|ACT57098.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter asiaticus str. psy62] Length = 289 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 289/289 (100%), Positives = 289/289 (100%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL Sbjct: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR Sbjct: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI Sbjct: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV Sbjct: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK Sbjct: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 >gi|315121826|ref|YP_004062315.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495228|gb|ADR51827.1| formamidopyrimidine-DNA glycosylase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 295 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 220/291 (75%), Positives = 253/291 (86%), Gaps = 3/291 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRRNL+ VMKNM +TDI LHRKNLRFDFP +F+ RGKKI +V RRAKYL Sbjct: 4 MPELPEVEIIRRNLIPVMKNMILTDIWLHRKNLRFDFPPNFALNVRGKKITNVVRRAKYL 63 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LIELE NLSII HLGMSGSFIIE TS K IK+P+HNHVTISL+N T+KYRVIYN Sbjct: 64 LIELEDNLSIIAHLGMSGSFIIEDTSSTNSQKKIKDPRHNHVTISLSNEDKTQKYRVIYN 123 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFMDLV+TSL+ QYP L +GPEP D++FNA YLTHQF+K+NSNLKNALLNQ+IV Sbjct: 124 DPRRFGFMDLVKTSLRDQYPSLIKIGPEPTDSAFNATYLTHQFYKRNSNLKNALLNQRIV 183 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEALWRA++SP+R +SL+Q+N TP + + +LIQEIQKV+ DAI+AGGSSLR Sbjct: 184 AGLGNIYVCEALWRARISPVRTAKSLVQDNKTPNEKISRLIQEIQKVITDAINAGGSSLR 243 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYVH DGSIG FQN+F+VYGKTG+ C SNCGQMIRRIVQ+GRSTFYCTYCQ Sbjct: 244 DYVHTDGSIGSFQNSFAVYGKTGKSCPSNCGQMIRRIVQSGRSTFYCTYCQ 294 >gi|325291755|ref|YP_004277619.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] gi|325059608|gb|ADY63299.1| Formamidopyrimidine-DNA glycosylase [Agrobacterium sp. H13-3] Length = 311 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 152/302 (50%), Positives = 193/302 (63%), Gaps = 15/302 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + L R +LRF FP F+ G+ II + RRAKYL Sbjct: 12 MPELPEVETVRRGLAPTMEGARIRKLHLGRPDLRFPFPEDFAGLIEGRTIISLGRRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK------------PIKNPQHNHVTISLTNNTN 108 LIELE L+I+ HLGMSGSF IE + K+ +H+HV L Sbjct: 72 LIELEDGLTIVAHLGMSGSFRIEAAADEAGNRNAPGAFHYARSKDGKHDHVVFHLDKGEE 131 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK Sbjct: 132 --RICVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFQGKSQPLK 189 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + LL+QK++AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DA Sbjct: 190 STLLDQKVIAGLGNIYVCEALWRAHLSPLRAAGTLVTKTGEPKPELINLTEKIRDVIADA 249 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYC 287 I AGGSSLRD++ DG++GYFQ++FSVY + G+PC CG + RIVQAGRSTFYC C Sbjct: 250 IAAGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERIVQAGRSTFYCAAC 309 Query: 288 QK 289 QK Sbjct: 310 QK 311 >gi|240849911|ref|YP_002971300.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] gi|240267034|gb|ACS50622.1| formamidopyrimidine-DNA glycosylase [Bartonella grahamii as4aup] Length = 291 Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 146/293 (49%), Positives = 192/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+ II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVVTDAKIVSVRLNRRDLRFPFPEAFSERLIGRTIIELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC----AKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE+ + K +H+H + + + Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTVFSTTSKLIKHDHFVMDIQTRDG-EVYHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV T Y++P L LG EP NSF+ YL F K +LK+ LL+Q I Sbjct: 120 NDVRRFGFMLLVNTDKLYEHPLLNKLGLEPMSNSFSGRYLQKAFVNKKMSLKSVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L + L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTARACEFADSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+HIDGS+GYFQ+AFSVYG+ G+ CL CG I RI+QAGRS+FYC+ CQK Sbjct: 240 RDYMHIDGSLGYFQHAFSVYGREGKQCLE-CGTPIVRILQAGRSSFYCSQCQK 291 >gi|159184256|ref|NP_353352.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] gi|22001592|sp|Q8UIH4|FPG_AGRT5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159139583|gb|AAK86137.2| formamidopyrimidine-DNA glycosylase [Agrobacterium tumefaciens str. C58] Length = 298 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 154/300 (51%), Positives = 193/300 (64%), Gaps = 13/300 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ V + L R +LRF FP F+ GK II + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 LIELE L+I+ HLGMSGSF IE K+ +H+HV L + Sbjct: 61 LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGE--E 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + VIYNDPRRFGFM LVE + YP LGPEP N+ +A YL +F K+ LK+ Sbjct: 119 RVCVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKST 178 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QKI+AG+GNIYVCEALWRA LSP+R +L+ G PK L L ++I+ V+ DAI Sbjct: 179 LLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIA 238 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD++ DG++GYFQ++FSVY + G+PC CG + R+VQAGRSTFYC CQK Sbjct: 239 AGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298 >gi|254460471|ref|ZP_05073887.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2083] gi|206677060|gb|EDZ41547.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium HTCC2083] Length = 283 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 129/294 (43%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM++ + ++R NLR+ FP S G KI + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMESTRIAKADVNRPNLRWPFPDQMSERLTGAKIERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ S+++HLGMSG +I + + +H+HV + N RV + Sbjct: 61 LADLDTGESLLIHLGMSGRMLISGAKIGQFTHDHPPAEKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N+F+ YL K S +K ALL+Q + Sbjct: 116 NDPRRFGAMDLLDTKTADSHKLLSSIGPEPLGNNFDEAYLIEVLKTKGSPIKTALLDQSV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA ++P RK + K + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAHIAPSRKANKIS------KPRVASLVPIIRQVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F VYG+ GEPC + CG I+RIVQ+GRS+FYC CQ+ Sbjct: 230 KDFRQASGDLGYFQHSFDVYGREGEPCKTVDCGNTIKRIVQSGRSSFYCPSCQR 283 >gi|49475062|ref|YP_033103.1| formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] gi|81648257|sp|Q6G4T2|FPG_BARHE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49237867|emb|CAF27063.1| Formamidopyrimidine-DNA glycosylase [Bartonella henselae str. Houston-1] Length = 291 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 141/293 (48%), Positives = 191/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+R++LRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIVSVTLNRRDLRFPFPEAFSERLIGRTIMGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT----SCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + K +H+HV + + + K Y + Y Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDFLRERSSTVSKFVKHDHVVMDI-QAKDGKVYHLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV+T Y++P L+ LG EP N+F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLVDTRSLYEHPLLKKLGLEPMSNAFSGSYLQEVFVNKKISLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GGS+L Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLALKTECARELAASLAQNIRNVITEAISSGGSTL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+ DGS+GYFQ++FSVYG+ G+ CL CG I RI+Q+GRS+FYC+ CQK Sbjct: 240 RDYIRTDGSLGYFQHSFSVYGREGKECLH-CGIPIVRILQSGRSSFYCSQCQK 291 >gi|255263904|ref|ZP_05343246.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] gi|255106239|gb|EET48913.1| formamidopyrimidine-DNA glycosylase [Thalassiobium sp. R2A62] Length = 283 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 176/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + R +LR+ FP + + GK I + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPAMEGRRIFRADVRRPDLRWPFPKNMADRLTGKTIERLRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++I+HLGMSG +I + +H+HV + RV + Sbjct: 61 LADLSSGETLIIHLGMSGRMLISGDQLGVFHSEHPAPEKHDHVVFDMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL ET+ + ++ +GPEP N F+A YL + KNS +K+ LL+Q+I Sbjct: 116 NDARRFGAMDLAETATLEDHWLIKPIGPEPLGNQFDAAYLVDRLKTKNSPIKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK L K + L+ I+ VL +AIDAGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGIHPARKAAKLS------KARIESLVPIIRDVLSEAIDAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ+ F VY + G PC + CG I+RIVQ+GRS+FYC CQ+ Sbjct: 230 KDYRQADGELGYFQHTFRVYDQEGNPCSAVGCGSTIKRIVQSGRSSFYCPTCQR 283 >gi|319403662|emb|CBI77247.1| Formamidopyrimidine-DNA glycosylase [Bartonella rochalimae ATCC BAA-1498] Length = 291 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 190/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE +K K +H+H I++ + K YR+ Y Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINIR-AKDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLESTNFLAQNICNVITEAIASGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 240 RDYMHADSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|319406580|emb|CBI80222.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. 1-1C] Length = 291 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 147/293 (50%), Positives = 190/293 (64%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L+RKNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE +K K +H+H I++ + K YR+ Y Sbjct: 61 LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINI-QAKDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T+ Y++P LR LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + L Q I V+ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLKSTNFLAQNICNVITEAIASGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H+D S+GYFQ+ FSVYG+ G+ CL NC I RIVQ+GRS+FYC CQK Sbjct: 240 RDYMHVDSSLGYFQHHFSVYGREGKECL-NCRVPIVRIVQSGRSSFYCPQCQK 291 >gi|49473899|ref|YP_031941.1| formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] gi|81647239|sp|Q6G0L3|FPG_BARQU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49239402|emb|CAF25740.1| Formamidopyrimidine-DNA glycosylase [Bartonella quintana str. Toulouse] Length = 291 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 137/293 (46%), Positives = 187/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + I L+R++LRF FP FS G+ I+++ RR KYL Sbjct: 1 MPELPEVETVRRGLEPVITGAKIISITLNRRDLRFPFPEAFSERLVGRTIMELGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT----SCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE + + K +H+H + + + K Y + Y Sbjct: 61 LFHLSQNETILSHLGMSGSWRIEDDLLRKTYSAAGKFVKHDHFLMDI-QAKDGKVYHLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L++T+ Y++P L+ LG EP N F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLLDTNRIYEHPLLKKLGLEPLSNEFSGRYLQEAFVNKKISLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEALWR++LSP R +L ++ L Q I+ V+ +AI GGS+L Sbjct: 180 IAGLGNIYVCEALWRSRLSPQRGAFTLALKTVCAREFADSLAQNIRNVIAEAISFGGSTL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+ DGS+GYFQ++FSVYG+ G+ C CG I RI Q+GRS+FYC+ CQK Sbjct: 240 RDYIRTDGSLGYFQHSFSVYGREGKECF-QCGIPITRISQSGRSSFYCSQCQK 291 >gi|163867542|ref|YP_001608741.1| formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] gi|189044583|sp|A9IN26|FPG_BART1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161017188|emb|CAK00746.1| Formamidopyrimidine-DNA glycosylase [Bartonella tribocorum CIP 105476] Length = 291 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 144/293 (49%), Positives = 195/293 (66%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + + L+R++LRF FP FS G+KI+++ RRAKYL Sbjct: 1 MPELPEVETVRRGLESVVTDAKIVSVQLNRRDLRFPFPEAFSERLIGRKILELGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE----HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L + +I+ HLGMSGS+ IE T+ + K +H+H + + N Y +IY Sbjct: 61 LFHLSQDETILSHLGMSGSWRIENDLLRTAFSMTSKLVKHDHFIMDI-QTRNGDVYHLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM LV+T Y++P L LG EP + F+ YL F K +LK LL+Q I Sbjct: 120 NDVRRFGFMLLVDTDKLYKHPLLNKLGLEPMSHGFSGRYLQKAFVNKKVSLKGVLLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR++LSP R +L +++ L Q I+ V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSRLSPQRGAFTLASKTVYARELANSLAQNIRNVISEAILSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H+DGS+GYFQ+AFSVYG+ G+ CL CG I RI+Q+GRS+FYC+ CQK Sbjct: 240 RDYMHVDGSLGYFQHAFSVYGREGKECL-QCGTPIIRILQSGRSSFYCSQCQK 291 >gi|121602138|ref|YP_989473.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] gi|166215609|sp|A1UU20|FPG_BARBK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120614315|gb|ABM44916.1| formamidopyrimidine-DNA glycosylase [Bartonella bacilliformis KC583] Length = 291 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 154/293 (52%), Positives = 191/293 (65%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLMGSRIISVSLGCKNLRFPFPESFSERLTGRIIIKLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK----PIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ +E K K H+H +S TN K YR+IY Sbjct: 61 LFHLSQNETIVSHLGMSGSWRVEDDLLRKKHSYMGKLVAHDHFIMSF-QATNGKIYRLIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T Y++P LR LG EP DN+ + YL F K ++LK ALL+Q I Sbjct: 120 NDSRRFGFMLLADTMRLYEHPLLRNLGLEPIDNAVSGAYLQKAFINKKTSLKAALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R+ +L + ++ L Q I V+ +AI +GGSSL Sbjct: 180 VAGLGNIYVCEALWRSYLSPERRALTLASKSAHACELAKCLAQNICDVISEAIFSGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYVHIDGS+GYFQ+ FSVYG+ G+ C S CG I RIVQ+GRS+FYC CQK Sbjct: 240 RDYVHIDGSLGYFQHCFSVYGREGKEC-SRCGMHIVRIVQSGRSSFYCPQCQK 291 >gi|149203140|ref|ZP_01880111.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] gi|149143686|gb|EDM31722.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. TM1035] Length = 283 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 184/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + +A G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPVMEGQVIASASVNRPDLRWPFPPNMAARLTGQTVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG ++ + + + +H+HV + N R+ + Sbjct: 61 LADLTSGESLLIHLGMSGRMLVSGDPLGRFVHDHPAPEKHDHVVFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N+F+ YL +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLPTATAETHPLLARIGPEPLGNAFSEPYLVAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA+LSP+++ +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARLSPLQRAGALSGKRA------AALVPIIRDVLSDAISAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC C I R+VQAGRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRSPGCNGHIARVVQAGRSSFYCPLCQR 283 >gi|209551935|ref|YP_002283852.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238066646|sp|B5ZYK9|FPG_RHILW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209537691|gb|ACI57626.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 301 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 190/303 (62%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVAKLELRRGDLRFPFPDAFADRVSGRTIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-------------KNPQHNHVTISLTNNT 107 L++L+ ++I HLGMSGSF IE + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGRIEEGAGAATPGEFHHARSKDEKHDHVVFHLESPA 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K L Sbjct: 121 GPR--RVVYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRHKAQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K+ALL+QK +AG+GNIYVCEALWRA LSPIR +L G PK+ L L+ I+ V+ D Sbjct: 179 KSALLDQKNIAGLGNIYVCEALWRAHLSPIRAAGTLATAGGRPKEQLNLLVASIRDVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC Sbjct: 239 AITAGGSSLRDHIQTDGSLGYFQHSFSVYDREGQACRTPGCGGTVARIVQAGRSTFYCAT 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|260574420|ref|ZP_05842424.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] gi|259023316|gb|EEW26608.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sp. SW2] Length = 283 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM T+ ++R +LR+ FP + +A G +++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLEPVMAGQTIVAAQVNRPDLRWPFPPNMAARLTGARVLGLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG ++ + +H+HV + + + RV + Sbjct: 61 LADLSSGETLLIHLGMSGRMLVSGAMLGQFHHAHPAPAKHDHVVLDMESGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T +P L +LGPEP N+F+ L +N+ +K+ALL+Q + Sbjct: 116 NDARRFGAMDLMATDGAESHPLLASLGPEPLGNAFDESVLAAALKNRNTPIKSALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA+L+P K SL L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARLNPAAKAGSLTPEQTAS------LVPIIRQVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G+PC C I R+VQ+GRS+FYC CQ+ Sbjct: 230 RDYRQTDGELGYFQHRFHVYDREGQPCATPGCPGHIERMVQSGRSSFYCPVCQR 283 >gi|307942717|ref|ZP_07658062.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] gi|307773513|gb|EFO32729.1| formamidopyrimidine-DNA glycosylase [Roseibium sp. TrichSKD4] Length = 297 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 133/298 (44%), Positives = 183/298 (61%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + +R +LRF FP +F G K+ +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPSFEGAVIAKLDQNRPDLRFPFPENFEGRLTGHKVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L ++E +++HLGMSGSF IE + + KNP+H+HV L + Sbjct: 61 LADIETGDVLVMHLGMSGSFRIETDADELSPGAFQFERSKNPKHDHVVFHLEQKSG-ATA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM L+E + +P +G EP N + + F K + LK ALL Sbjct: 120 RIIYNDPRRFGFMTLIERATLGDHPLFAKMGMEPLGNDLDGQQIADLFSGKKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ L+PIR +L G D L + I+ L DAI+AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSGLNPIRAAGTLATKTGRATDKAKLLAEMIRDTLSDAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ DGS+GYFQ++F+VY + GEPC + CG I RIVQ+ RSTFYC CQ+ Sbjct: 240 GSTLRDHTKADGSLGYFQHSFAVYDREGEPCRTEGCGGTIERIVQSNRSTFYCPRCQR 297 >gi|190890023|ref|YP_001976565.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 652] gi|238692544|sp|B3PZ93|FPG_RHIE6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190695302|gb|ACE89387.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CIAT 652] Length = 296 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 145/298 (48%), Positives = 191/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEEGAASAMPGEFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|116250141|ref|YP_765979.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] gi|166198738|sp|Q1MMD9|FPG_RHIL3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115254789|emb|CAK05863.1| putative formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. viciae 3841] Length = 296 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 192/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASGVPGEFHHARSKDEKHDHVVFHLQAASGLR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N +A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVGRADLATHPFFRDLGPEPTGNELSAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTAGGRPKAQLDLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + + C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSVYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|225075626|ref|ZP_03718825.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] gi|224953048|gb|EEG34257.1| hypothetical protein NEIFLAOT_00642 [Neisseria flavescens NRL30031/H210] Length = 276 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E +++HLGMSGS I + + +H+H+ + T + Y+DPR Sbjct: 62 IITFETG-ILLIHLGMSGSLRIFTANDERIATPDKHDHLDFVFDDGTVLR-----YHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 116 KFGAVLWYEGIAEH-HPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 175 GNIYANESLFKAGISPLRPANKLTKKE------CALLVETVKAVLQRAIETGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 229 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|316931481|ref|YP_004106463.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] gi|315599195|gb|ADU41730.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 179/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + ++ H+HV +T+ Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIEADGETTPGEFHYQRSEDRTHDHVVFEMTSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RIVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDANLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA+LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRARLSPKRKAATLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC +CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPC-PSCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|319405133|emb|CBI78739.1| Formamidopyrimidine-DNA glycosylase [Bartonella sp. AR 15-3] Length = 291 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 143/293 (48%), Positives = 186/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L ++ + + L+ KNLRF FP FS G+ II +SRRAKYL Sbjct: 1 MPELPEVETIRRGLDPLLTGAKIISVKLNHKNLRFPFPEAFSERLVGRTIIRLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSG + IE K K H+H I + K YR+ Y Sbjct: 61 LFYLSHNETILSHLGMSGLWRIEDEFLRKEHSSIDKLVAHDHCIIK-VQAKDDKIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGF+ L +T+ Y++P L+ LG EP +N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFILLTDTAKLYEHPLLKRLGVEPTENTLSGAYLKKAFANKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I ++ +AI +GG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRSAFTLALEDVYMLESANFLAQNICNLITEAIISGGASL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H DGS GYFQ+ FSVYG+ G+ CL NC + I RI+Q+GRS+FYC CQK Sbjct: 240 RDYMHADGSFGYFQHYFSVYGREGKECL-NCKEPIVRILQSGRSSFYCPQCQK 291 >gi|254474974|ref|ZP_05088360.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] gi|214029217|gb|EEB70052.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. R11] Length = 283 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ +T ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVITKATVNRPDLRWPFPDRMAERLSGRRVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG + + + + +H+HV + N RV + Sbjct: 61 LADLDSGETLLIHLGMSGRMTVSGDPLGQFVHDHPQAQKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATAEQHKLLAVLGPEPLGNGFHDDHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQIAAPR------VASLVPIIKDVLSDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C I R+ Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRREGCDGTIARVTQSGRSSFYCAKCQR 283 >gi|192288520|ref|YP_001989125.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] gi|238692562|sp|B3Q620|FPG_RHOPT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192282269|gb|ACE98649.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris TIE-1] Length = 291 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 132/297 (44%), Positives = 177/297 (59%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F+A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + G+PC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGKPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|284799871|ref|ZP_05985082.2| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] gi|284796762|gb|EFC52109.1| DNA-formamidopyrimidine glycosylase [Neisseria subflava NJ9703] Length = 276 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + + G+K++ +RRAKYL Sbjct: 2 MPELPEVETTLRGIASHIDGKKIEKVIIRQFKLRWPIHPNLAQILAGRKVLACNRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E +++HLGMSGS I + +H+H+ + + T + Y+DPR Sbjct: 62 IITFETG-ILLIHLGMSGSMRIFTADDERIAMPDKHDHLDFAFDDGTVLR-----YHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 116 KFGAVLWYEGIAEH-HPLLEKLGPEPLSDDFDANYLYQKLKTQKRAVKLALMDNAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 175 GNIYANESLFKAGISPLRPANKLTKKE------CALLVENVKAVLQRAIETGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 229 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 276 >gi|319638532|ref|ZP_07993294.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] gi|317400281|gb|EFV80940.1| formamidopyrimidine-DNA glycosylase [Neisseria mucosa C102] Length = 275 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 159/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G+K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIEPHIDGKKIAKVTIRQFKLRWPVHPDLAQILAGRKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E +++HLGMSGS I + +H+H+ + T + Y+DPR Sbjct: 61 IITFETG-ILLIHLGMSGSLRIFTADDERIATPDKHDHLDFVFDDGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAVLWYEGIAEH-HPLLEKLGPEPLSEAFDANYLYQKLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ I+ +L+ AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPLRPANKLTKKE------CALLVETIKAILLRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG +I + R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|319408042|emb|CBI81696.1| Formamidopyrimidine-DNA glycosylase [Bartonella schoenbuchensis R1] Length = 291 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 142/293 (48%), Positives = 187/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L+RKNLRF FP FS G++II++ RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLTGAKIISVTLNRKNLRFPFPEEFSEKLVGRRIIELDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT----SCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ H+GMSG++ IE A K H+H + + Y +IY Sbjct: 61 LFHLSQNETILGHMGMSGTWRIEDKLFKKEYASMGKLVAHDHFIMDVRAKDGNV-YHIIY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGF+ LV+T ++P L+ LG EP + + YL F K ++LK ALL+Q I Sbjct: 120 NDTRRFGFILLVDTIKLNEHPLLKKLGVEPMGDVLSGSYLQKAFINKKTSLKMALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEALWR++LSP R +L + ++ L Q I+ V+ +AI AGGSSL Sbjct: 180 IAGLGNIYVCEALWRSRLSPQRSAFTLALKSARAYELANCLAQNIRDVISEAIIAGGSSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDYVH DGS+GYFQ+ FSVYG+ G+ CL C I RI+QAGRS+FYC CQK Sbjct: 240 RDYVHTDGSLGYFQHNFSVYGREGKECL-QCEVPIVRILQAGRSSFYCPKCQK 291 >gi|39933164|ref|NP_945440.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] gi|81564483|sp|Q6NDM1|FPG_RHOPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39652789|emb|CAE25528.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris CGA009] Length = 291 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 133/297 (44%), Positives = 176/297 (59%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + HR+NLRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + ++ H+HV + + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVEADGETRPGEFHYPRSEDRTHDHVVFEMASGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV++NDPRRFGFM + S P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP RK +L P D +L + I++VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKDEPTDHAVRLTEAIREVLGEAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ+AF VY + GEPC CG ++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHAFKVYDREGEPC-PTCGGTVQRFVQNGRSTFWCPKCQK 291 >gi|319898369|ref|YP_004158462.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] gi|319402333|emb|CBI75872.1| Formamidopyrimidine-DNA glycosylase [Bartonella clarridgeiae 73] Length = 291 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 145/293 (49%), Positives = 185/293 (63%), Gaps = 6/293 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L + + + L+RKNLRF FP FS G+ I+ + RRAKYL Sbjct: 1 MPELPEVETIRRGLNPFLTGAKIISVKLNRKNLRFPFPEAFSERLVGRTIVKLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----KNPQHNHVTISLTNNTNTKKYRVIY 116 L L N +I+ HLGMSGS+ IE K K H+H I+ + + YR+ Y Sbjct: 61 LFYLSRNETILSHLGMSGSWRIEGEFLKKEHSSVSKLVAHDHCIIN-VQAKDDRIYRLTY 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFGFM L +T Y++P L+ LG EP N+ + YL F K ++LK ALL+Q I Sbjct: 120 NDVRRFGFMLLTDTRKLYEHPLLKRLGVEPMKNTLSGAYLKKAFVNKKTSLKTALLDQSI 179 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEALWR+ LSP R +L + + L Q I V+ +AI AGG+SL Sbjct: 180 VAGLGNIYVCEALWRSHLSPQRSAFTLALEDLCMLESANFLAQNICDVITEAIVAGGTSL 239 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY+H DGS+GYFQ+ FSVYG+ G+ CL NC I RI+Q+GRS+FYC CQK Sbjct: 240 RDYMHADGSLGYFQHYFSVYGREGKECL-NCEIPIVRILQSGRSSFYCPQCQK 291 >gi|241759723|ref|ZP_04757823.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] gi|241319731|gb|EER56127.1| DNA-formamidopyrimidine glycosylase [Neisseria flavescens SK114] Length = 275 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + + LR+ + G K++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIDGKKIEKVIIRQFKLRWPIHPDLAQILAGCKVLACNRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E +++HLGMSGS I + +H+H+ + T + Y+DPR Sbjct: 61 IITFETG-ILLIHLGMSGSLRIFTADDERIATPDKHDHLDFVFDDGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAVLWYEGIAEH-HPLLEKLGPEPLSDDFDANYLYQKLKNQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPLRPANKLTKKE------YALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VY + EPC+ CG +I + R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYSRHNEPCV-QCGGLIFKETLGQRGTFYCPNCQK 275 >gi|254503738|ref|ZP_05115889.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] gi|222439809|gb|EEE46488.1| formamidopyrimidine-DNA glycosylase [Labrenzia alexandrii DFL-11] Length = 297 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 186/298 (62%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + +R +LRF FP F G+ + +SRR+KYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLTKVDQNRPDLRFPFPDDFVERLTGRSVTALSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L +++ +I+HLGMSGSF IE+ + K+P+H+HV L+ N Sbjct: 61 LADIDSGDVLIMHLGMSGSFRIENAIDKSTPGEFAHERNKDPKHDHVVFHLSLP-NDGSA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFMDLV + +P R LG EP N+ + L F + S LK ALL Sbjct: 120 RIIYNDPRRFGFMDLVPRTDLSAHPYFRELGLEPLGNALSGEVLARLFAGRKSPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCE+LWR+ LSP R +L+ +G P L Q ++ L DAI AG Sbjct: 180 NQKLIAGLGNIYVCESLWRSGLSPKRLASTLVTKSGKPTKKADLLAQNVRLTLEDAILAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ DG++GYFQ++F+VY + G PC NC +RR+VQ+ RSTFYC CQ+ Sbjct: 240 GSSLRDHTQADGTLGYFQHSFAVYDREGAPCRTPNCTGTVRRVVQSNRSTFYCPICQR 297 >gi|254485969|ref|ZP_05099174.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] gi|214042838|gb|EEB83476.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. GAI101] Length = 283 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 181/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGQVIARADVNRPDLRWPFPPDMAARLTGQKVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG +I + + + +H+HV + + N RV + Sbjct: 61 LADLSSGESLLIHLGMSGRMLISGDPLGQFVHDHPSPEKHDHVVLHMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T + L ++GPEP N FN +L +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTQNADAHKLLASIGPEPLGNDFNEAHLVAVLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I++VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGKIAATR------VAGLVPIIRQVLEEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGDPCRAEECTGQIARIVQSGRSSFYCAQCQR 283 >gi|158422424|ref|YP_001523716.1| formamidopyrimidine-DNA glycosylase [Azorhizobium caulinodans ORS 571] gi|172048048|sp|A8IQM5|FPG_AZOC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158329313|dbj|BAF86798.1| formamidopyrimidine-DNA glycolase [Azorhizobium caulinodans ORS 571] Length = 293 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 135/298 (45%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVRRGLLPVLQGAVIESAEARRPDLRWPLPEGFAERLTGRRVEAVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-------HTSCAKPIKNPQ-HNHVTISLTNNTNTKKY 112 L +L+G +IVHLGMSGS IE P P H+HV L Sbjct: 61 LADLDGGEVLIVHLGMSGSIRIEGAQVKGRPAGFYHPRGEPGTHDHVVFHLAGGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V +NDPRRFG M LV +P L +LGPEP N+F+A YL + +NLK ALL Sbjct: 117 -VTFNDPRRFGAMLLVPYDQLDSHPLLSSLGPEPLGNTFHADYLAQACAGRRTNLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK+VAG+GNIYV EAL RA LSP R +L +G P +L+ I+ VL +AI AG Sbjct: 176 DQKVVAGLGNIYVSEALHRAGLSPRRMASTLASASGAPNVRTERLVTAIRDVLREAIQAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ ++G +GYFQ+ F VY + GEPC + C ++RIVQAGRSTF+C CQ+ Sbjct: 236 GSSLKDHRQVNGELGYFQHNFKVYDREGEPCPTLRCKGHVQRIVQAGRSTFFCATCQR 293 >gi|56695071|ref|YP_165418.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] gi|81350839|sp|Q5LWT9|FPG_SILPO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56676808|gb|AAV93474.1| formamidopyrimidine-DNA glycosylase [Ruegeria pomeroyi DSS-3] Length = 283 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGAVIARAEVNRPDLRWPFPDRMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHDHPAAQKHDHVVFHMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ ++ L LGPEP N F+ YL +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLMATATADEHKLLMVLGPEPLGNDFHEDYLVAALKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP RK + + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGVSPRRKAGQIAAAR------VSALVPIIRQVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C ++RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAGCDGTVQRITQSGRSSFYCAQCQR 283 >gi|110677612|ref|YP_680619.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] gi|122973136|sp|Q16DL0|FPG_ROSDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109453728|gb|ABG29933.1| formamidopyrimidine-DNA glycosylase [Roseobacter denitrificans OCh 114] Length = 283 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 186/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIARADVNRPDLRWPFPADMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + + +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHSHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +NS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFKNRNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ PIRK + + L+ I++VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPIRKAGKISGAR------VATLVPIIREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C I+RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSFYCAQCQR 283 >gi|83941662|ref|ZP_00954124.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] gi|83847482|gb|EAP85357.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. EE-36] Length = 283 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP +A G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPVMEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L S++VHLGMSG +I + + + +H+HV + N RV + Sbjct: 61 LADLSSGESLLVHLGMSGRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L ++GPEP N F+ +L KN+ +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLLDTASADSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + L+ I+ VL +AI AGGS+L Sbjct: 176 VAGLGNIYVCETLYRAGIHPARKAGRIAAKRVGS------LVPIIRDVLNEAITAGGSTL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFKRADGELGYFQHSFDVYGRAAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 283 >gi|126724501|ref|ZP_01740344.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] gi|126705665|gb|EBA04755.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium HTCC2150] Length = 284 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ M T+T ++R +LR+ FP + + G+K++ +SRR+KY+ Sbjct: 2 MPELPEVETVRQGLLGAMDGATITKAEVNRPDLRWPFPENMAQRITGQKVLGLSRRSKYI 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L+ L ++I+HLGMSG + + +H+HV + N +V + Sbjct: 62 LVSLASGETLIIHLGMSGRMTVSGDPLGQFHHEHPAPQKHDHVVFHMDNGA-----QVTF 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL + + + +GPEP N FNA YL + + +K ALL+Q+I Sbjct: 117 NDPRRFGAMDLATSDDIENHWLISKIGPEPLGNEFNAPYLVERLKTRAMPIKTALLDQQI 176 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA +SP RK + + + L+ I+ VL +AI +GGSSL Sbjct: 177 VAGLGNIYVCEVLFRAGVSPQRKAKDISAK------KIGALVPIIRDVLSEAIVSGGSSL 230 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ+ F VY + GE CL+ CG I RIVQ+GRS+F+C CQ+ Sbjct: 231 KDYRQADGELGYFQHRFKVYDREGETCLNDGCGTEISRIVQSGRSSFFCKKCQR 284 >gi|227824215|ref|YP_002828188.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] gi|254789447|sp|C3MCY7|FPG_RHISN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227343217|gb|ACP27435.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium fredii NGR234] Length = 296 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 145/298 (48%), Positives = 191/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L ++ + L R +LRF FP +F+AA G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPAIEGALLVRAELRRPDLRFPFPENFAAAVSGRRILALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 +I+LEG I+ HLGMSGSF IE + K+ +H+HV L + + Sbjct: 61 MIDLEGGDVIVAHLGMSGSFRIEAGAQPAAPGEFHHPRGKDEKHDHVIFHLDGGSG--QM 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMDL ++ R LG EP N+ +A YL + K+ LK ALL Sbjct: 119 RVIYNDPRRFGFMDLARRDTIAEHAYFRDLGEEPTGNALDAAYLAARLAGKSQPLKTALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L++ I+ V+ DAI AG Sbjct: 179 DQRTIAGLGNIYVCEALWRSGLSPNRAAGTLVDKRGRPKQALLALVEAIRAVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D++ DGS+GYFQ+AFSVY + GE C C + RIVQAGRSTF+C CQK Sbjct: 239 GSSLKDHIQADGSLGYFQHAFSVYDRAGEACRKPGCDGTVTRIVQAGRSTFHCPRCQK 296 >gi|85706182|ref|ZP_01037277.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] gi|85669346|gb|EAQ24212.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. 217] Length = 283 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +M+ + ++R +LR+ FP SA G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPIMEGQVIARATVNRPDLRWPFPPEMSARLTGQRVLALRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + + +H+HV + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDPLGQFVHAHPAPEKHDHVVLDMAGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ +P L +GPEP N FN +YLT +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTTTAESHPLLARIGPEPLGNDFNELYLTAALKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA +SP+ + +L L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCETLYRAGISPLTRAGTLSAKRAAS------LVPIIRDVLRDAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+ C S C +I R++QAGRS+FYC CQ+ Sbjct: 230 RDFRQTDGELGYFQHSFDVYGREGDLCRNSGCTGLITRVIQAGRSSFYCPKCQR 283 >gi|260431703|ref|ZP_05785674.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] gi|260415531|gb|EEX08790.1| formamidopyrimidine-DNA glycosylase [Silicibacter lacuscaerulensis ITI-1157] Length = 283 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGVVIERADVNRPDLRWPFPERMAERLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G ++++HLGMSG + + + +H+HV + N R+ + Sbjct: 61 LADLSGGETLLIHLGMSGRMTVSGDPLGQFVHHHPMPQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ Q+ L LGPEP N FN YL F + + +K ALL+Q+I Sbjct: 116 NDPRRFGAMDLMPTATAEQHKLLAVLGPEPLGNDFNETYLIDAFRGRATPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP RK + + L+ I+ VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARVSPRRKAGQISAGR------VGALVPVIRTVLTEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC + CG IRRI Q+GRSTFYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTEGCGAEIRRITQSGRSTFYCAQCQR 283 >gi|110636424|ref|YP_676632.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium sp. BNC1] gi|123161465|sp|Q11AV8|FPG_MESSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110287408|gb|ABG65467.1| DNA-(apurinic or apyrimidinic site) lyase [Chelativorans sp. BNC1] Length = 297 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 179/298 (60%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS +G +I + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMEGARIIHVEQRRADLRFPFPAGFSEHVKGCRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L+ LE ++ HLGMSGSF IE + K K +H+HV L + Sbjct: 61 LLHLENGRVLVSHLGMSGSFRIEESGSDKLRGDFHYARSKAEKHDHVVFHLARHEG-GSA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFM L++++ +P LG EP N+ + L K + LK AL+ Sbjct: 120 RVIYNDPRRFGFMLLLDSADLEAHPLFAGLGVEPTGNALDGALLARLLAGKRAPLKAALM 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP R ++ G +L I+ V+ +AI AG Sbjct: 180 DQRLVAGLGNIYVCEALWRAGLSPRRIAATIATREGKSTGRSERLAGAIRTVIAEAIAAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DYV DGS+GYFQ++FSVY + G+PC C I+R VQ GRSTFYC CQ+ Sbjct: 240 GSSLKDYVQADGSLGYFQHSFSVYDREGKPCRKEGCSGTIQRFVQGGRSTFYCPICQR 297 >gi|126734088|ref|ZP_01749835.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] gi|126716954|gb|EBA13818.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. CCS2] Length = 283 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM+ + ++R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMEGHVIAQADVNRPDLRWPFPAQMAKRLTGKRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG +I + + +H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRMLISGHTVGEFHHPHPVPAKHDHVVFHMDDGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ET+ + + +R LGPEP N+FN YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMETATQDDHWLIRDLGPEPLGNAFNESYLIERLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VSGLGNIYVCEVLFRAGIHPARKAGRISAAR------VATLVPLIRDVLSEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + GEPC+ C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHVFQVYDREGEPCVTPGCDRTITRIVQSGRSSFFCPQCQR 283 >gi|254453376|ref|ZP_05066813.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] gi|198267782|gb|EDY92052.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 238] Length = 283 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 170/294 (57%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L+ M+ +T ++R +LR+ FP + G + + RR+KY+ Sbjct: 1 MPELPEVETVRAGLVPSMQGHVITRAEVNRPDLRWPFPDDMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++I+HLGMSG + + + +H+HV + N RV + Sbjct: 61 LADLSTGETLIIHLGMSGRMTVSGDPLGQFHHDHPAPAKHDHVVFHMGNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL +T + ++ +GPEP N FN YL F KN+ +K ALL+Q++ Sbjct: 116 NDPRRFGAMDLAKTDALNDHWLIKPIGPEPLGNGFNEAYLVKAFAAKNTPVKTALLDQRL 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA + P RK + L + + L+ ++ VL AI AGGSSL Sbjct: 176 IAGLGNIYVCEVLFRAHIDPTRKAKDLSKKQ------IASLVPIVRDVLNKAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ AF Y + G PC C I RIVQ+GRSTFYC CQ+ Sbjct: 230 KDYRQADGELGYFQKAFQAYDRAGHPCQTPECTGSIARIVQSGRSTFYCPKCQR 283 >gi|261363684|ref|ZP_05976567.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] gi|288568235|gb|EFC89795.1| DNA-formamidopyrimidine glycosylase [Neisseria mucosa ATCC 25996] Length = 275 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 161/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGINPHIQGKKVADVVLRQTKLRWQVNPQLAELLAGQEVLICRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I A+ +H+HV I + T + Y+DPR Sbjct: 61 IISFATG-ILLIHLGMSGSLRIFTDGDARIDHPDKHDHVDIVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP + F+A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYEGIAEH-HPLLEKLGPEPLSDDFSADYLYQKLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP R + + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGISPHRPADKIKKKECVV------LVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRYNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|163738131|ref|ZP_02145547.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] gi|161388747|gb|EDQ13100.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis BS107] Length = 283 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFKGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPQRKAGQIA------AQRVGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GEPC C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEPCRRAKCDGTVGRITQSGRSSFYCGKCQR 283 >gi|163745032|ref|ZP_02152392.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] gi|161381850|gb|EDQ06259.1| formamidopyrimidine-DNA glycosylase [Oceanibulbus indolifex HEL-45] Length = 283 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGQVIARAEVNRPDLRWPFPDRMAERLTGQRVSLLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +LEG S++VHLGMSG ++ + +H+HV + + N R+ + Sbjct: 61 LADLEGGESLLVHLGMSGRMLVSGDPLGQFQHNHPAPEKHDHVVLHMGNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T+ + L +LGPEP N F+ +L +N +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLLNTADADAHKLLASLGPEPLGNDFHEAHLVAALKGRNMPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA + P RK + + + L+ I++VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGIHPARKAGRISASR------IAGLVPIIRQVLADAITAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ G+ C C I RIVQ GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGKACRRPSCDGTIGRIVQGGRSSFYCPRCQR 283 >gi|149912815|ref|ZP_01901349.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] gi|149813221|gb|EDM73047.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. AzwK-3b] Length = 283 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + GK ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGAVIARADVNRPDLRWPLPVDMATRLSGKTVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG + + +H+HV + N R+ + Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGAFHHDHPAPAKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L LGPEP N F+ YL +N+ +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLISTPKADTHPLLAKLGPEPLGNQFDESYLADALSGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP R+ R+L + L+ I+ VL DAI+AGGSSL Sbjct: 176 VAGLGNIYVCEALYRARISPKRRARNLSRARA------AALVPIIRDVLRDAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VY + G+PC C I RIVQ+GRS+FYCT CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYDREGDPCRTPGCTGTITRIVQSGRSSFYCTLCQR 283 >gi|254471056|ref|ZP_05084459.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] gi|211960198|gb|EEA95395.1| formamidopyrimidine-DNA glycosylase [Pseudovibrio sp. JE062] Length = 300 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 132/300 (44%), Positives = 176/300 (58%), Gaps = 11/300 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L N T+ + R +LRF F F ++++ SRRAKYL Sbjct: 1 MPELPEVETVRRGLAPFFDNATICRVEQRRPDLRFPFGDDFVERLENRQVVSFSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI----------KNPQHNHVTISLTNNTNTK 110 L++L+ +++HLGMSGSF T A+P K+PQH+HV + Sbjct: 61 LLDLDSGDVLVMHLGMSGSFRWIETEDAEPTQTVEMYHAKGKHPQHDHVIFHVRPADRET 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++IYNDPRRFGFM L+ S +P +G EP N + YL F + ++LK A Sbjct: 121 IVKIIYNDPRRFGFMVLIPRSKLATHPMFVDMGIEPLGNELDGAYLAKLFENRKTSLKAA 180 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LLNQK +AG+GNIYVCEALWR LSP +L +G P +L I++VL +AI Sbjct: 181 LLNQKFIAGLGNIYVCEALWRTGLSPFNSASTLAGKSGKPLKKADELSNHIREVLQEAIK 240 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 +GGSSL+D+ DGS+GYFQ+ FSVY + G+ C C +I R VQ GRSTF+C CQK Sbjct: 241 SGGSSLKDHRQADGSLGYFQHNFSVYDREGQACRTPKCSGVIERKVQNGRSTFFCPKCQK 300 >gi|299133357|ref|ZP_07026552.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] gi|298593494|gb|EFI53694.1| formamidopyrimidine-DNA glycosylase [Afipia sp. 1NLS2] Length = 293 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F+A G I + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRGDLRFPLQKDFAARLAGHVITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L +L+ +++HLGMSGSF + K +N H+HV + N Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVMQGDNGKIPAVFHHPRSENRTHDHVVFEMGNGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + +NDPRRFG+M +V + P LR LGPEP N+F+A L K ++LK ALL Sbjct: 117 -ISFNDPRRFGYMKIVPRADLEGEPFLRALGPEPLGNAFDAAMLAQACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R+ +L +G P D +L+ I+ VL AI+AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRQASTLATKSGAPTDHAVRLVAAIRAVLNAAIEAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTRGCRGTVKRFTQNGRSTFWCPSCQK 293 >gi|310816813|ref|YP_003964777.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] gi|308755548|gb|ADO43477.1| formamidopyrimidine-DNA glycosylase [Ketogulonicigenium vulgare Y25] Length = 286 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 122/293 (41%), Positives = 175/293 (59%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ VM+ + + R +LR+ FP + GK+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLLPVMEGQVIAAADVRRPDLRWPFPPDMAQRLTGKRVLSLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG +I + +H+HV + + R+ + Sbjct: 61 LADLDSAETLLIHLGMSGRMLISGVMIGEYEHARALPEKHDHVVLDMAGGA-----RIAF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T Q P + LGPEP N F+ YL + + + +K+ALL+Q I Sbjct: 116 NDARRFGAMDLMATDAVDQNPLIAVLGPEPFGNDFSPAYLAARLAGRKTPIKSALLDQHI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA++ P R L +L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARIHPARLAGDLTALEAD------RLVPLIRDVLDEAIRAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 RDY DG++GYFQ+AF VYG+ G+PC C + RIVQAGRS+F+C CQ Sbjct: 230 RDYQKTDGTLGYFQHAFQVYGREGQPCSTPGCIGTVARIVQAGRSSFFCPLCQ 282 >gi|254511767|ref|ZP_05123834.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] gi|221535478|gb|EEE38466.1| formamidopyrimidine-DNA glycosylase [Rhodobacteraceae bacterium KLH11] Length = 283 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 183/294 (62%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGVVIDRADVNRPDLRWPFPDRMADRLTGQRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLSSGETLLIHLGMSGRMTVSGDPLGQFVHDHPAVQKHDHVVFHMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ Q+ L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLQTATAEQHKLLSVLGPEPLGNDFHEQHLIDAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+R ++SP RK + + L+ I++VL DAI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLYRGRVSPRRKAGQISAPR------VAALVPIIRQVLQDAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ GEPC + CG I+RI Q+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGEPCRTESCGATIKRITQSGRSSFYCAQCQR 283 >gi|83950593|ref|ZP_00959326.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] gi|83838492|gb|EAP77788.1| formamidopyrimidine-DNA glycosylase [Roseovarius nubinhibens ISM] Length = 283 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G+K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGGTIARAEVNRPDLRWPFPDRMAERLAGQKVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L ++++HLGMSG +I + + + + +H+HV + + + R+ + Sbjct: 61 LADLASGETLLIHLGMSGRMLISGDAQGRFVHDHPAPEKHDHVVLHMADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MD++ T +P L LGPEP N F+ Y + K+ALL+Q+I Sbjct: 116 NDPRRFGAMDILPTDGAEAHPLLAVLGPEPLGNGFHEEYFVAALKTRTMPAKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R+ +L + L+ I+ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRAGISPKRRVNNLSSAR------IASLVPIIRDVLGDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ+ F VY + G+PC C ++ R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHNFDVYDREGQPCRRPGCDGIVARVVQSGRSSFYCPRCQR 283 >gi|154247235|ref|YP_001418193.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] gi|238686730|sp|A7IKJ3|FPG_XANP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154161320|gb|ABS68536.1| formamidopyrimidine-DNA glycosylase [Xanthobacter autotrophicus Py2] Length = 293 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 131/298 (43%), Positives = 180/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ V++ + R +LR+ P +F+ G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPVLQGAVIESAEARRPDLRWPLPDNFAERLAGRRVEAIGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L+G +I+HLGMSGS IE + H+HV + L Sbjct: 61 LADLDGGEVMILHLGMSGSIRIEGGAVKGRPGRFHHPRGAGGPHDHVVLHLAGGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V +NDPRRFG + +V +P L LGPEP N FNA YL +++++LK ALL Sbjct: 117 -VTFNDPRRFGAILIVPYDQIMSHPLLAGLGPEPLGNGFNAEYLARACARRHTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK+VAG+GNIYVCEAL+RA LSP R ++ G P +L+ I+ VL +AI AG Sbjct: 176 DQKLVAGLGNIYVCEALFRAGLSPRRLAHTIATAEGAPTRRAERLVIAIRDVLREAIHAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ ++G +GYFQ+ F VY + G+PC + +C IRRIVQ GRSTFYC CQ+ Sbjct: 236 GSSLRDHRQVNGELGYFQHTFKVYDREGQPCQTLHCKDTIRRIVQNGRSTFYCPTCQR 293 >gi|126730152|ref|ZP_01745964.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] gi|126709532|gb|EBA08586.1| formamidopyrimidine-DNA glycosylase [Sagittula stellata E-37] Length = 283 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGQVIAHAQVNRPDLRWPFPERMAQRLTGAHVLQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L + ++++HLGMSG ++ + + + +H+HV + N RV + Sbjct: 61 LADLSTDETLLIHLGMSGRMLVSGDPLGQFVHDHPMPEKHDHVVFDMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L +GPEP N+F +L + +N+ +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMSTRAVDAHPLLARIGPEPLGNAFTESHLVERLKGRNTPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R+ + P R+ + + L+ ++ VL DAI AGGSSL Sbjct: 176 VAGLGNIYVCEALFRSGIHPARRCVRISAAR------ISTLVPIVRDVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCKAPGCTGTIHRIVQSGRSSFFCPKCQR 283 >gi|163743751|ref|ZP_02151125.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] gi|161383012|gb|EDQ07407.1| formamidopyrimidine-DNA glycosylase [Phaeobacter gallaeciensis 2.10] Length = 283 Score = 331 bits (850), Expect = 5e-89, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ FP + G+ + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + + +H+HV + N R+ + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ Q+ L LGPEP NSF+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFSGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP RK + + L+ I+ VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPKRKAGQIAAPR------VGALVPIIKDVLTDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ DG +GYFQ++F VYG+ GE C CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQADGELGYFQHSFDVYGREGEACRRAGCGGTVGRITQSGRSSFYCGKCQR 283 >gi|15964118|ref|NP_384471.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|307301263|ref|ZP_07581025.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] gi|307317934|ref|ZP_07597371.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|7404366|sp|Q59752|FPG_RHIME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15073294|emb|CAC41802.1| Probable formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti 1021] gi|306896336|gb|EFN27085.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti AK83] gi|306903719|gb|EFN34306.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti BL225C] Length = 301 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 189/303 (62%), Gaps = 16/303 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F+ A G++II +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFANAVAGRRIIALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-------------KPIKNPQHNHVTISLTNNT 107 +IELEG II HLGMSGSF IE K+ +H+HV L + Sbjct: 61 MIELEGGDVIIAHLGMSGSFRIEKGPIEAGADPATPGAFHHPRGKDEKHDHVVFHLDGGS 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 RVIYNDPRRFGFMDL S + LR LG EP N+ +A YL +F K L Sbjct: 121 GPA--RVIYNDPRRFGFMDLARRSALADHVFLRGLGEEPTGNALDAAYLATRFAGKIQPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ G PK L L + I+ V+ D Sbjct: 179 KAALLDQRTIAGLGNIYVCEALWRSGLSPKRSAGTLVDKRGRPKQALIALTERIRAVIAD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSL+D++ DGS+GYFQ++FSVY + GE C C + RIVQAGRSTFYC + Sbjct: 239 AIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRSTFYCPH 298 Query: 287 CQK 289 CQK Sbjct: 299 CQK 301 >gi|329120805|ref|ZP_08249465.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] gi|327459677|gb|EGF06018.1| DNA-formamidopyrimidine glycosylase [Neisseria bacilliformis ATCC BAA-1200] Length = 272 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N TV+ + + + LR+ P G + + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQTVSAVTIRQPKLRWQIPPALPETLHGLTVRECRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I + +H+HV I+ N T + Y+DPR Sbjct: 61 LIRFDTG-VLLIHLGMSGSLRIWQGNAPA---ADKHDHVDIAFANGT-----LLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + L+ LG EP + F A YL K+ S +K AL++ KIV G+ Sbjct: 112 RFGAILWLAGVAEH-HDLLKDLGVEPLSDDFTADYLFQALQKRGSPIKTALMDNKIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A ++P R +SL + L ++++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAIAPQRAAKSLSKTE------CAALTAAVKQILRRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ + VYG+ +PC S CG I + V R TFYC CQ+ Sbjct: 225 NSEGKSGYFQQEYKVYGRANQPC-SQCGTPIAKTVIGQRGTFYCPVCQR 272 >gi|241207318|ref|YP_002978414.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861208|gb|ACS58875.1| formamidopyrimidine-DNA glycosylase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 296 Score = 331 bits (848), Expect = 8e-89, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 189/298 (63%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP F+ G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLTPAMEGTRVTRLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAVSGMPGEFHHARSKDEKHDHVVFHLQGLGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVGRADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWRA LSPIR +L+ G PK L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRAHLSPIRAAGTLVTPGGRPKAQLDLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FS Y + + C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIQTDGSLGYFQHSFSAYDRESQACRTPGCGGTVARIVQAGRSTFYCATCQK 296 >gi|114762146|ref|ZP_01441614.1| formamidopyrimidine-DNA glycosylase [Pelagibaca bermudensis HTCC2601] gi|114545170|gb|EAU48173.1| formamidopyrimidine-DNA glycosylase [Roseovarius sp. HTCC2601] Length = 283 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 187/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + ++R +LR+ FP + G +I+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNRIAQAQVNRPDLRWPFPERMAERLTGARILQLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + + + +H+HV + + + RV + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDMADGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ +P L LGPEP N+F+ +L +N +K+ALL+QKI Sbjct: 116 NDPRRFGAMDLMQTATAEAHPLLAALGPEPLGNAFSESHLVAALAGRNMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ R + + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVRRISEKR------IASLVPVIREVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G+PC +CG + R+VQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGQPCRTPDCGATVHRMVQSGRSSFYCPRCQR 283 >gi|325134462|gb|EGC57107.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M13399] Length = 280 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|217979158|ref|YP_002363305.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] gi|254789444|sp|B8EKR5|FPG_METSB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|217504534|gb|ACK51943.1| formamidopyrimidine-DNA glycosylase [Methylocella silvestris BL2] Length = 292 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 135/297 (45%), Positives = 182/297 (61%), Gaps = 13/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R +LRF FP F G++I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVMVGARILSVDQRRPDLRFPFPDRFPERLAGRRILALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-------PIKNPQHNHVTISLTNNTNTKKYR 113 L +L+ +I+HLGMSGSF +E AK P KN H+HV +LT+ R Sbjct: 61 LADLDDGDVLIMHLGMSGSFRVEQAGPAKTLSPRGAPPKNAAHDHVVFTLTSGG-----R 115 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 ++YNDPRRFGFM + + +P R+LG EP N + L F K ++LK ALL+ Sbjct: 116 IVYNDPRRFGFMQIAARADLAAHPLFRSLGVEPLGNELSGAALARLFAGKTTSLKAALLD 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIYVCEAL RA LSP+R+ SL + +G P + +L I++VL +A+ AGG Sbjct: 176 QSLVAGLGNIYVCEALHRAGLSPLRQAGSLTKKSGRPTERANRLADTIREVLEEAVAAGG 235 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ +G++GYFQ+ F VY + PC C I RI Q GRS+F+C+ CQK Sbjct: 236 SSLRDHRQTNGALGYFQHNFRVYDRALHPCPTPGCKGEISRITQGGRSSFFCSMCQK 292 >gi|84684525|ref|ZP_01012426.1| Formamidopyrimidine-DNA glycolase [Maritimibacter alkaliphilus HTCC2654] gi|84667504|gb|EAQ13973.1| Formamidopyrimidine-DNA glycolase [Rhodobacterales bacterium HTCC2654] Length = 283 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 172/294 (58%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + R+ LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGHRIARAEVRREGLRWPFPERMAERLTGATVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ N + ++HLGMSG +I T+ K +H+HV + + R+ Sbjct: 61 LADLDTNETCLIHLGMSGRILISGTTLGKFHHEHPATEKHDHVVLDMDGGA-----RITL 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL T +P + LGPEP N FN YL + KN+ +K+ALL+Q+I Sbjct: 116 NDARRFGVMDLFTTGTGDLHPLIAALGPEPLGNEFNEGYLIAKLAGKNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGIHPARKAGRISAAR------IASLVPIIRDVLAEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G+PC C I RIVQ+GRS+FYC CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYDQEGQPCKTPECQAKIARIVQSGRSSFYCPTCQR 283 >gi|148559153|ref|YP_001259977.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] gi|166215613|sp|A5VTD0|FPG_BRUO2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148370410|gb|ABQ60389.1| formamidopyrimidine-DNA glycosylase [Brucella ovis ATCC 25840] Length = 293 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 185/297 (62%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L ++ Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHL-MRSDGASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|15677162|ref|NP_274315.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|9911065|sp|P55044|FPG_NEIMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|7226536|gb|AAF41671.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis MC58] gi|316984086|gb|EFV63064.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] gi|325140479|gb|EGC63000.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis CU385] gi|325200078|gb|ADY95533.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis H44/76] Length = 275 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|331701575|ref|YP_004398534.1| formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] gi|329128918|gb|AEB73471.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus buchneri NRRL B-30929] Length = 280 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K T+ + + + P+ F A RGK I + RR KYL Sbjct: 1 MPELPEVETVRRGLTQLVKGSTIQSVDVLYAKMINLPPNDFKKALRGKTIEKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + +E +H H+ LT+ + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYDVEPEDAP----VGKHTHIIFHLTDGRQLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + Q L+T+GPEP ++ Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGTEMQVAGLKTIGPEPTEDDLTVDYMQKIFGKSRKVIKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L + +L + I L AI G+++ Y Sbjct: 172 GNIYADEVLWLSKINPQQPANTLTLRQ------IKELRKNIIAELAKAIAGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN +VYG+ GEPC S CG I +I A R T +C CQ Sbjct: 226 TAYGEAGSFQNQLNVYGREGEPC-SRCGTKIVKIKLAQRGTHFCPKCQ 272 >gi|255067093|ref|ZP_05318948.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] gi|255048689|gb|EET44153.1| DNA-formamidopyrimidine glycosylase [Neisseria sicca ATCC 29256] Length = 275 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGISPHIQGKKVADVVLRQTKLRWQVNPQLAEILAGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +++HLGMSGS I A+ +H+H I + T + Y+DPR Sbjct: 61 IIGFATG-ILLIHLGMSGSLRIFTDGDARIDHPDKHDHADIVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP + F+ YL +F + +K AL++ +V G+ Sbjct: 115 KFGAILWYEGIAEH-HPLLEKLGPEPLSDDFSVEYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++ +SP R + + L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKSGISPHRPADKVKKKE------CAVLVETIKSVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-RCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|254670484|emb|CBA06192.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha153] Length = 275 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|254713417|ref|ZP_05175228.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|254716226|ref|ZP_05178037.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261218000|ref|ZP_05932281.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261321150|ref|ZP_05960347.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] gi|260923089|gb|EEX89657.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M13/05/1] gi|261293840|gb|EEX97336.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M644/93/1] Length = 293 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 139/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E +YP L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEYPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|182677448|ref|YP_001831594.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] gi|238691220|sp|B2IE81|FPG_BEII9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|182633331|gb|ACB94105.1| formamidopyrimidine-DNA glycosylase [Beijerinckia indica subsp. indica ATCC 9039] Length = 288 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 139/293 (47%), Positives = 181/293 (61%), Gaps = 9/293 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + T + R +LRF FP +F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMVGASFTTVEQRRADLRFPFPDNFAARLEGRRVEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L +L+ +++HLGMSGSF IE P KN H+HV L+ T R+IYN Sbjct: 61 LADLDDAQVLVMHLGMSGSFRIEKAGDLASPPPGKNAAHDHVVFGLSTGT-----RIIYN 115 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFGFM L+ +P R +G EP N L F K + LK ALL+Q ++ Sbjct: 116 DPRRFGFMHLIARQDLAGHPLFRNVGIEPLGNELEGALLARLFAGKTTPLKTALLDQTLI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYVCEAL RA LSP R +L G P + ++L + I+ VL +AI+AGGSSLR Sbjct: 176 AGLGNIYVCEALHRAGLSPRRAAGTLAGKKGQPTERAHRLSEIIRAVLEEAIEAGGSSLR 235 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG++GYFQ+ F VY + EPC CG I+RIVQAGRSTF+C CQ+ Sbjct: 236 DHRQADGALGYFQHRFRVYDREAEPCPREGCGGTIKRIVQAGRSTFFCAKCQR 288 >gi|163733258|ref|ZP_02140702.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] gi|161393793|gb|EDQ18118.1| formamidopyrimidine-DNA glycosylase [Roseobacter litoralis Och 149] Length = 283 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 186/294 (63%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + + ++R +LR+ FP +A GK++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLTPAMEGVVIKQADVNRPDLRWPFPVDMAARLTGKRVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L++L+ +++VHLGMSG ++ + + +H+HV + NN R+ + Sbjct: 61 LMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHRHPAPEKHDHVVFHMANNA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KNS +K+ LL+Q+I Sbjct: 116 NDPRRFGAMDLMETASADAHKLLAVLGPEPLGNDFHESHLIAAFKNKNSPVKSVLLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEAL+RAK+ P RK + + L+ +++VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALFRAKIHPTRKAGKISGAR------VAGLVPIVREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F YG+ G+PC C IRRIVQ+GRS+FYCT CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDAYGREGDPCKRSGCTGQIRRIVQSGRSSFYCTQCQR 283 >gi|86356012|ref|YP_467904.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CFN 42] gi|123513260|sp|Q2KDA9|FPG_RHIEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86280114|gb|ABC89177.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CFN 42] Length = 296 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 147/298 (49%), Positives = 193/298 (64%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVTRLELRRRDLRFPFPDALAERVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAASAMPGEFHHARSKDEKHDHVVFHLEGGGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDIVGRADLSAHPFFRDLGPEPTGNELGATYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ + G PK L L+ I++V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTSGGRPKQQLDLLVASIREVIADAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 239 GSSLRDHIRADGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 296 >gi|254700815|ref|ZP_05162643.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|254709159|ref|ZP_05170970.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|256030683|ref|ZP_05444297.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|256060142|ref|ZP_05450324.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|256158684|ref|ZP_05456567.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|256254088|ref|ZP_05459624.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|256370578|ref|YP_003108089.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|261221229|ref|ZP_05935510.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261316657|ref|ZP_05955854.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261324120|ref|ZP_05963317.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261751322|ref|ZP_05995031.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|265987729|ref|ZP_06100286.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|265997190|ref|ZP_06109747.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|294851408|ref|ZP_06792081.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] gi|256000741|gb|ACU49140.1| formamidopyrimidine-DNA glycosylase [Brucella microti CCM 4915] gi|260919813|gb|EEX86466.1| formamidopyrimidine-DNA glycosylase [Brucella ceti B1/94] gi|261295880|gb|EEX99376.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis B2/94] gi|261300100|gb|EEY03597.1| formamidopyrimidine-DNA glycosylase [Brucella neotomae 5K33] gi|261741075|gb|EEY29001.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 5 str. 513] gi|262551658|gb|EEZ07648.1| formamidopyrimidine-DNA glycosylase [Brucella ceti M490/95/1] gi|264659926|gb|EEZ30187.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M292/94/1] gi|294819997|gb|EFG36996.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NVSL 07-0026] Length = 293 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|23503030|ref|NP_699157.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161620091|ref|YP_001593978.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|254705182|ref|ZP_05167010.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|260567351|ref|ZP_05837821.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261755887|ref|ZP_05999596.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] gi|29611718|sp|Q8FXR6|FPG_BRUSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044584|sp|A9MAB2|FPG_BRUC2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23349072|gb|AAN31072.1| formamidopyrimidine-DNA glycosylase [Brucella suis 1330] gi|161336902|gb|ABX63207.1| formamidopyrimidine-DNA glycosylase [Brucella canis ATCC 23365] gi|260156869|gb|EEW91949.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 4 str. 40] gi|261745640|gb|EEY33566.1| formamidopyrimidine-DNA glycosylase [Brucella suis bv. 3 str. 686] Length = 293 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRKPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|254295384|ref|YP_003061407.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] gi|254043915|gb|ACT60710.1| formamidopyrimidine-DNA glycosylase [Hirschia baltica ATCC 49814] Length = 281 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 128/293 (43%), Positives = 178/293 (60%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + L R +LRF FP FS +G KI + RRAK+L Sbjct: 1 MPELPEVETVRRGLIPAMQGRVIERVELRRADLRFPFPDDFSQRLQGVKIERLDRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 ++EL + +HLGM+G F IE NP+H+HV L +N +V + Sbjct: 61 MVELSSGELLTMHLGMTGRFSIEGEGFDIFAHAIAGNPKHDHVVFHLEDN-----LKVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM+L + LGPEP N F+A +L KK+S +K+ALL+Q++ Sbjct: 116 NDPRRFGFMELYRAGEAEKSKRFSKLGPEPLSNHFSAAHLNEVLQKKSSPIKSALLDQRV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R + ++ KL ++ V+ +AI+AGGSS+ Sbjct: 176 VAGLGNIYVCEALFRAGISPTRISSTIKGKRA------EKLAPIVKDVISEAIEAGGSSI 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG +GYFQ+ F VYG+ EPC C + ++RI Q+GRSTF+C CQK Sbjct: 230 SDFAQTDGKLGYFQHNFLVYGRENEPC-KVCDKPVQRISQSGRSTFFCASCQK 281 >gi|254718221|ref|ZP_05180032.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|265983178|ref|ZP_06095913.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306839961|ref|ZP_07472755.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] gi|264661770|gb|EEZ32031.1| formamidopyrimidine-DNA glycosylase [Brucella sp. 83/13] gi|306404925|gb|EFM61210.1| formamidopyrimidine-DNA glycosylase [Brucella sp. NF 2653] Length = 293 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 183/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKGLGVEPTGNLLSGEVLAALFTGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCTNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|159045909|ref|YP_001534703.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] gi|189044587|sp|A8LNK8|FPG_DINSH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157913669|gb|ABV95102.1| formamidopyrimidine-DNA glycosylase [Dinoroseobacter shibae DFL 12] Length = 284 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 128/295 (43%), Positives = 185/295 (62%), Gaps = 17/295 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM + + + R +LR+ P + GK+I+ ++RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPVMTGQRIIEADIRRPDLRWPLPANMQTRLEGKRILRLARRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN-----PQHNHVTISLTNNTNTKKYRVI 115 L EL+ ++I+HLGMSG +I + +H+HV + RV+ Sbjct: 61 LAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLEKHDHVVLDFDTGA-----RVV 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 +ND RRFG MDL ET+ Q+P L TLGPEP N+F+ YLT + + + +K+ALL+QK Sbjct: 116 FNDARRFGAMDLCETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLDQK 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCEAL++A +SP+RK + + + L+ I+ VL DAI+AGGSS Sbjct: 176 VVAGLGNIYVCEALFQAGISPLRKAGRVSETR------IASLVPIIRTVLGDAIEAGGSS 229 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG +GYFQ+ F VY + PC++ C ++RR+VQ+GRS+FYC CQ+ Sbjct: 230 LRDYRQTDGDLGYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR 284 >gi|261493056|ref|ZP_05989596.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496344|ref|ZP_05992739.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307988|gb|EEY09296.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311276|gb|EEY12439.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 274 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWAVSPELSQ-MAGAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + ++ HLGMSGS I + I +H+H+ + TN T + YNDPR Sbjct: 60 IIRTDKGDILV-HLGMSGSLRILSQTAD--IAFGKHDHIDLVTTNGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G+ Sbjct: 112 KFGCWLWAEKAEDHE--LLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTKKQ------CERLVKTIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C +CG+ I V R+T++C CQ+ Sbjct: 224 QPDGKPGYFSQVLQVYGRKGEACN-DCGKTIETKVIGQRNTYFCPKCQR 271 >gi|319944878|ref|ZP_08019140.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] gi|319741448|gb|EFV93873.1| DNA-formamidopyrimidine glycosylase [Lautropia mirabilis ATCC 51599] Length = 275 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 163/289 (56%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ V D+ L + LR+ + +G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIQGKKVADVVLRQTRLRWQVNPQLAEILKGQEVLSCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E +++HLGMSGS I A+ +H+HV + + T + Y+DPR Sbjct: 61 IIGFETG-ILLIHLGMSGSLRIFTCGDARIEHPDKHDHVDMVFADGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ +P L LGPEP + F+A YL +F + +K AL++ +V G+ Sbjct: 115 RFGAISWHEGIAEH-HPLLEKLGPEPLSDDFSADYLYQKFKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+ + P R + + L++ I+ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRSGILPHRPANKIKKKE------CAVLVETIKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ EPC+ CG ++++ V R TFYC CQK Sbjct: 228 NSDGKSGYFQQEYTVYGRHNEPCV-CCGGLVQKEVLGQRGTFYCPNCQK 275 >gi|304392447|ref|ZP_07374388.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] gi|303295551|gb|EFL89910.1| formamidopyrimidine-DNA glycosylase [Ahrensia sp. R2A130] Length = 297 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 144/298 (48%), Positives = 198/298 (66%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L VM+ + + L R +LRF FP F+ A++ ++I +SRRAKYL Sbjct: 1 MPELPEVETVRGGLAPVMEGAVIDRLELRRPDLRFPFPDDFANASQNRRIEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFI-IEHTSCAKPI-------KNPQHNHVTISLTNNTNTKKY 112 L++L+ +I+HLGMSGSF +E ++ A+P ++ +H+HVT LT T +K Sbjct: 61 LMDLDDGTVVIMHLGMSGSFRTLEGSAEAQPGNFHHEKSRDEKHDHVTFHLTTATG-EKA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFM S +P +LG EP N+ +A Y+ + KN +K ALL Sbjct: 120 RVVYNDPRRFGFMLSTPRSELDVHPSFASLGVEPVGNALDADYVAGKLADKNVPMKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QKI+AG+GNIYVCEALWRA+LSP RK R+L+Q +G P L +L+ I+ V+ DAI AG Sbjct: 180 DQKIIAGLGNIYVCEALWRARLSPRRKARTLVQKSGRPTPRLEELVVHIRNVIADAIKAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ DG++GYFQ+ F+ Y + G+ C C I RIVQ+GRSTFYC CQ+ Sbjct: 240 GSTLRDHAATDGTLGYFQHTFAAYDQEGQDCQRVECSGTITRIVQSGRSTFYCPRCQR 297 >gi|297184285|gb|ADI20402.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium EB080_L43F08] Length = 289 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 123/300 (41%), Positives = 187/300 (62%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKILRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQDGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN+ Y+ + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNSPYVYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + + L+ I+ VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRK------KIDVLVPIIRDVLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSL+D+ +G +GYFQ++F+VYG+ G+ C S NC ++I+RIVQ+GRS+FYC CQK Sbjct: 230 AGGSSLKDHRQTNGDLGYFQHSFAVYGREGKKCNSANCSELIKRIVQSGRSSFYCAKCQK 289 >gi|254437279|ref|ZP_05050773.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] gi|198252725|gb|EDY77039.1| formamidopyrimidine-DNA glycosylase [Octadecabacter antarcticus 307] Length = 283 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 174/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + ++R +LR+ FP + +A G K+ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLIPSMQGHVIMRADVNRPDLRWPFPDNMAARLTGAKVTALRRRSKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++I+HLGMSG + + + +H+HV + N RV + Sbjct: 61 LADLDRGETLIIHLGMSGRMTVSGDPLGQFHHDHPAAAKHDHVVFHMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL +T + ++ +GPEP N+F+ YL +N+ +K ALL+Q + Sbjct: 116 NDARRFGAMDLTQTDTLDDHWLIKPIGPEPLGNTFDETYLIKALATRNTPIKTALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA+++P RK + L K + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRARINPTRKAKDLS------KKRVASLVPIIRDVLTEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DY DG +GYFQ AF Y + G C C I RIVQ+GRSTFYC CQ+ Sbjct: 230 KDYRQADGELGYFQKAFQAYDREGHICQTPECTGSIARIVQSGRSTFYCPTCQR 283 >gi|225626549|ref|ZP_03784588.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|260169587|ref|ZP_05756398.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|261759114|ref|ZP_06002823.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] gi|225618206|gb|EEH15249.1| formamidopyrimidine-DNA glycosylase [Brucella ceti str. Cudo] gi|261739098|gb|EEY27094.1| formamidopyrimidine-DNA glycosylase [Brucella sp. F5/99] Length = 293 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 138/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPGLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|114769647|ref|ZP_01447257.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] gi|114549352|gb|EAU52234.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HTCC2255] Length = 289 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 123/300 (41%), Positives = 185/300 (61%), Gaps = 22/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L VM + + R +LR+ FP + S G KI+ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLEPVMMGQKIRYADIRRPDLRWPFPENMSQRLIGAKIVRLHRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------KPIKNPQHNHVTISLTNNTNTK 110 L +L+ ++++HLGMSG I H KP +H+HV + + Sbjct: 61 LCDLDSGETLLIHLGMSGRMTISHAGNESEDLLGNFQYKPSIPAKHDHVILDMQGGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R+ +ND RRFG MDL++T + + +++LGPEP N FN YL + K + +K+A Sbjct: 118 --RISFNDARRFGAMDLIDTKNLFDHKLIKSLGPEPLGNEFNTPYLYSKLKGKAAPIKSA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+IV+G+GNIYVCE+LWRA ++P R + + + + L+ I+ VL +AI Sbjct: 176 LLDQRIVSGLGNIYVCESLWRAGINPKRLSGKVSRK------KIDVLVPFIRDVLREAIS 229 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 AGGSSLRD+ +G +GYFQ++F+VYG+ G+ C S C ++I+RI+Q+GRS+FYC+ CQK Sbjct: 230 AGGSSLRDHRQANGDLGYFQHSFAVYGREGKKCNSVNCSELIKRIIQSGRSSFYCSKCQK 289 >gi|13474651|ref|NP_106220.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] gi|17375857|sp|Q98BG6|FPG_RHILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14025406|dbj|BAB52006.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium loti MAFF303099] Length = 296 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 136/297 (45%), Positives = 181/297 (60%), Gaps = 11/297 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + R +LRF FP FS GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARLTRVEARRPDLRFPFPERFSERLTGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 + ++ +I HLGMSGSF IE + K+ H+HV + + Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIETDDDGETPGVFHHERSKSTAHDHVVFDVVAADG-ARS 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM L +P L LG EP N+ + + L + S LK ALL Sbjct: 120 RVIFNDPRRFGFM-LFAEGSPETHPMLAGLGVEPTGNTLDGVLLASLLKGRGSPLKAALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GNIYV EALWRA LSP+R+ ++ + + + +L + I+ V+ DAI AG Sbjct: 179 DQKLIAGLGNIYVSEALWRAGLSPLREAGTIARPSKKARQQSERLAEAIRSVISDAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRDY+H DGS+GYFQ++F+VY + GEPC CG I R+VQ+GRSTFYC CQ Sbjct: 239 GSSLRDYMHTDGSLGYFQHSFAVYDREGEPCPKPGCGGHIERVVQSGRSTFYCRTCQ 295 >gi|163757770|ref|ZP_02164859.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] gi|162285272|gb|EDQ35554.1| formamidopyrimidine-DNA glycosylase protein [Hoeflea phototrophica DFL-43] Length = 320 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 138/298 (46%), Positives = 189/298 (63%), Gaps = 12/298 (4%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L VM+ + + R +LRF FP F+ G++II + RRAKYLL Sbjct: 24 PELPEVETVRRGLQPVMEGARIIRVEQRRADLRFPFPEDFAKRLEGRQIIALGRRAKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCA---------KPIKNPQHNHVTISLTNNTNTKKY 112 + + + +I HLGMSGSF IE + + K+ +H+HV + + Sbjct: 84 ADFDDGMVLISHLGMSGSFRIEPDGDSPLTPGVFHHERSKDDKHDHVVFHIDGPAG--RA 141 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFG+MDL+ + ++P R+LG EP NS A L + K + LK ALL Sbjct: 142 RVIYNDPRRFGYMDLMVRAELAEHPWFRSLGVEPTGNSLEADELARRLAGKAAPLKAALL 201 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+I+AG+GNIYVCEALWRA+LSP + L+ G P+ L +L +I++V+ +AI AG Sbjct: 202 DQRIIAGLGNIYVCEALWRARLSPRKPAGRLVTKAGQPRKALERLTGDIREVISEAIAAG 261 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DG++GYFQ+ FSVY + G+ C CG +RRIVQ+GRSTF C CQK Sbjct: 262 GSSLRDHIQTDGTLGYFQHGFSVYDREGKACPRPGCGDTVRRIVQSGRSTFMCARCQK 319 >gi|261392423|emb|CAX49968.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis 8013] Length = 275 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|306842707|ref|ZP_07475350.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] gi|306287153|gb|EFM58655.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO2] Length = 293 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 136/298 (45%), Positives = 183/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C+ CG + R VQ+GRSTF+C CQ+ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQR 293 >gi|150398756|ref|YP_001329223.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] gi|166198753|sp|A6UFF8|FPG_SINMW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150030271|gb|ABR62388.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium medicae WSM419] Length = 306 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 147/308 (47%), Positives = 187/308 (60%), Gaps = 21/308 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + L R +LRF FP +F A G++I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGALLVRAELRRPDLRFPFPENFEDAVAGRRIVALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI------------------KNPQHNHVTIS 102 IELEG II HLGMSGSF IE + K+ +H+HV Sbjct: 61 TIELEGGDVIIAHLGMSGSFRIEFDGPGEGRIKESADPAVPGDFHRPRSKDEKHDHVVFH 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + RVIYNDPRRFGFM L ++ LR LG EP N+ +A YL +F Sbjct: 121 LD--ASCGPARVIYNDPRRFGFMALARREALAEHVFLRGLGEEPTGNALDAAYLAARFSG 178 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 K LK ALL+Q+ +AG+GNIYVCEALWR+ LSP R +L+ PK L +L I+ Sbjct: 179 KAQPLKAALLDQRTIAGLGNIYVCEALWRSGLSPKRAAGTLVDKRARPKQALVQLTDAIR 238 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRST 281 V+ DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C + C + RIVQAGRST Sbjct: 239 AVIADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTSGCRGTVERIVQAGRST 298 Query: 282 FYCTYCQK 289 FYC +CQK Sbjct: 299 FYCPHCQK 306 >gi|300025047|ref|YP_003757658.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] gi|299526868|gb|ADJ25337.1| formamidopyrimidine-DNA glycosylase [Hyphomicrobium denitrificans ATCC 51888] Length = 293 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 132/298 (44%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + L R NLRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVVTGRRIAAVELRRPNLRFPFPERFAERLVGQRIDRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK--------NPQHNHVTISLTNNTNTKKY 112 + EL G +++HLGM+G F I +P H+HV LT Sbjct: 61 IAELSGGEDLVMHLGMTGRFTILEKGRTDTPGEYVNSVGADPVHDHVVFKLTGGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM ++ + + ++P R LG EP + A YL + K +NLK L+ Sbjct: 116 RIVYNDPRRFGFMVMMPHAERSEHPLFRALGVEPLGSELTADYLAARARGKKANLKAFLM 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYV EAL+R+ LSP R R+L G P + KL+ I++VL AIDA Sbjct: 176 DQRIVAGLGNIYVAEALFRSGLSPNRVARALADRRGAPTERAEKLVPAIREVLEQAIDAR 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY G+ G FQN+F+VY + G PC CG IRR+V AGR++FYC CQ+ Sbjct: 236 GSTLRDYRDASGASGGFQNSFAVYDRAGRPCPRAGCGGEIRRVVHAGRASFYCPRCQR 293 >gi|209883645|ref|YP_002287502.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] gi|229541077|sp|B6JCQ7|FPG_OLICO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209871841|gb|ACI91637.1| formamidopyrimidine-DNA glycosylase [Oligotropha carboxidovorans OM5] Length = 294 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 127/299 (42%), Positives = 174/299 (58%), Gaps = 15/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + + + HR +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPAMEGVRIARVTAHRNDLRFPLQTDFVARLGGRVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN---------PQHNHVTISLTNNTNTKK 111 L +L+ +++HLGMSGSF + + H+HV + N Sbjct: 61 LADLDSGDVLLMHLGMSGSFRVAMDGGQEATPGIFHHPRSESRTHDHVVFEMDNGAV--- 117 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + +NDPRRFG+M +V + P L+ LGPEP N FNA L K ++LK AL Sbjct: 118 --ISFNDPRRFGYMKIVARADLEAEPFLKALGPEPLGNEFNAAMLAQACAGKATSLKAAL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q++VAG+GNIYVCEAL+RA LSP R+ +L G P +L+ I+ VL AI+A Sbjct: 176 LDQRVVAGLGNIYVCEALYRAHLSPKRRASTLASRTGAPSGHAERLVPAIRTVLNAAIEA 235 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GGSSLRD+ G +GYFQ++F VY + GEPC + C ++R Q GRSTF+C CQK Sbjct: 236 GGSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTRGCKGTVKRFTQNGRSTFWCPSCQK 294 >gi|325267966|ref|ZP_08134614.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] gi|324980569|gb|EGC16233.1| DNA-formamidopyrimidine glycosylase [Kingella denitrificans ATCC 33394] Length = 276 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + T++ + + + LR+ P S G+ + RRAKYL Sbjct: 5 MPELPEVETTLRGIAPHITHKTLSRVVIRQPKLRWPIPEDLSETLSGQTVQSCRRRAKYL 64 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE E +++HLGMSGS I P +H+HV +NT + Y+DPR Sbjct: 65 LIEWETG-VLLIHLGMSGSLRIFREKQPAPD---KHDHVDFIFADNT-----LLRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + LR LGPEP F A YL + K +K L++ +V G+ Sbjct: 116 RFGAVLWLPGVAEH-HELLRHLGPEPLSEDFTAEYLHERLRGKKRAVKLMLMDNALVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R +S+ + +L+ ++++L AI GGS+LRD+V Sbjct: 175 GNIYANESLFRAGILPDRAAQSIDLAD------CKRLVLAVKQILQRAIATGGSTLRDFV 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ + VYG+ GE C CG +I + V R TFYCT+CQK Sbjct: 229 DSEGKSGYFQQEYKVYGRAGE-CCKVCGGLIEKSVLGQRGTFYCTHCQK 276 >gi|297250511|ref|ZP_06864459.2| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] gi|296838830|gb|EFH22768.1| DNA-formamidopyrimidine glycosylase [Neisseria polysaccharea ATCC 43768] Length = 280 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+L+D+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLKDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|261400681|ref|ZP_05986806.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|269209592|gb|EEZ76047.1| DNA-formamidopyrimidine glycosylase [Neisseria lactamica ATCC 23970] gi|309379224|emb|CBX22181.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 275 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ + L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHQLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG +I + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLIVKETLGQRGTFYCPNCQK 275 >gi|325201993|gb|ADY97447.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240149] Length = 275 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGITPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDERIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPYRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|86139420|ref|ZP_01057989.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] gi|85823923|gb|EAQ44129.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. MED193] Length = 283 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 180/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIAQAHVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L EL+ +++VHLGMSG + + + + +H+HV + N RV + Sbjct: 61 LAELDRGETLLVHLGMSGRMTVSGDPLGQFVHDHPQAEKHDHVVFDMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ ++ L+ LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLIETAGLAEHKLLKVLGPEPLGNDFHEDHLIAAFKGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA++ P RK L + L+ I++VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAQILPTRKAGQLSARR------VASLVPIIRQVLEDAIKAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ E C CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREAEACRRQGCGGTIARITQSGRSSFYCGKCQR 283 >gi|323136854|ref|ZP_08071935.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] gi|322398171|gb|EFY00692.1| formamidopyrimidine-DNA glycosylase [Methylocystis sp. ATCC 49242] Length = 328 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 178/294 (60%), Gaps = 10/294 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + R +LRF FP F+ G++I+D+ RRAKYL Sbjct: 40 MPELPEVETVRRGLAPALVGARILRVEQRRGDLRFPFPPDFARRLGGRRILDLRRRAKYL 99 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----QHNHVTISLTNNTNTKKYRVIY 116 + +L+ + ++++HLGMSGSF I+ + + H+HV L N RV Y Sbjct: 100 IADLDADEALVMHLGMSGSFRIDEDAPGRFHHPRDKSAAHDHVVFHLDNGR-----RVTY 154 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM LV + R +G EP +A L + F + + +K LL+Q++ Sbjct: 155 NDPRRFGFMLLVPARELDAHNLFRGVGVEPLGEGLDAAMLANAFRGRKAPVKALLLDQRL 214 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL RA++SP+ +L+ G P L +L + I++VL DA++AGGSSL Sbjct: 215 VAGLGNIYVCEALHRARVSPLAAAGTLVTATGKPGAALARLPKAIKEVLADALEAGGSSL 274 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DGS+GYFQ++F VY + G C C + R+ Q+GRSTFYC CQK Sbjct: 275 RDHRQADGSLGYFQHSFRVYDREGAACPTPGCKGTVARVTQSGRSTFYCPRCQK 328 >gi|148251702|ref|YP_001236287.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. BTAi1] gi|166215611|sp|A5E887|FPG_BRASB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146403875|gb|ABQ32381.1| DNA-(apurinic or apyrimidinic site) lyase [Bradyrhizobium sp. BTAi1] Length = 293 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 128/298 (42%), Positives = 180/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F+ +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVAAEARRGDLRFPFQPDFAKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + K+ H+HV +++ + Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVIKQDDEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ + P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIEREPHLKDLGPEPLGNEFDAAMLATACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHARRLVEAIHAVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC + CG +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTSGELGYFQHSFQVYDREGEPCRTDGCGGVVKRFVQNGRSTFWCPKCQR 293 >gi|325205930|gb|ADZ01383.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M04-240196] Length = 280 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 280 >gi|306843600|ref|ZP_07476201.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] gi|306276291|gb|EFM57991.1| formamidopyrimidine-DNA glycosylase [Brucella sp. BO1] Length = 293 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 136/297 (45%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAEGLPSGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWRA LSP+R S+ +++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRAGLSPMRAAGSVAGE----MEVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+ C+ CG + R VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKACINPACGGTVERGVQSGRSTFFCASCQ 292 >gi|323339591|ref|ZP_08079865.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] gi|323092986|gb|EFZ35584.1| DNA-formamidopyrimidine glycosylase [Lactobacillus ruminis ATCC 25644] Length = 276 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K T+ D+ + + F GKK++DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLIKGKTIKDVNVLYDKIIVGSKAEFCKKLSGKKLLDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L+++ HL M G + + +H HV L + + + YND R Sbjct: 61 LFRFSGELTMVSHLRMEGKYFVRQKGEP----VEKHTHVIFYLMDGSE-----LHYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L +T + + LGPEP + +F++ KK +K ALL+Q +VAG+ Sbjct: 112 KFGRMELFKTGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQTLVAGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ AK+ P+ L + L I L A + GG+++R Y Sbjct: 172 GNIYADEVLYMAKIHPLTPCNELSRKQSDC------LRNSIIDELEKASEKGGTTIRSYA 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ VYGKTGE C CG I +IV R T YC CQ Sbjct: 226 NAFLEEGSFQFFLQVYGKTGEKCG-RCGTPIEKIVVGQRGTHYCPNCQ 272 >gi|17988229|ref|NP_540863.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62291019|ref|YP_222812.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82700930|ref|YP_415504.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis biovar Abortus 2308] gi|189025233|ref|YP_001936001.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225853608|ref|YP_002733841.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237816522|ref|ZP_04595515.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|254690315|ref|ZP_05153569.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 6 str. 870] gi|254694803|ref|ZP_05156631.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 3 str. Tulya] gi|254696432|ref|ZP_05158260.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 2 str. 86/8/59] gi|254731344|ref|ZP_05189922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 4 str. 292] gi|256045787|ref|ZP_05448665.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|256112507|ref|ZP_05453428.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|256258568|ref|ZP_05464104.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|256264948|ref|ZP_05467480.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|260546283|ref|ZP_05822023.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260563081|ref|ZP_05833567.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260755854|ref|ZP_05868202.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260759077|ref|ZP_05871425.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260760803|ref|ZP_05873146.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260884879|ref|ZP_05896493.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|261215129|ref|ZP_05929410.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|265992203|ref|ZP_06104760.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|265993943|ref|ZP_06106500.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|297247406|ref|ZP_06931124.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|22001593|sp|Q8YED2|FPG_BRUME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75496004|sp|Q57A83|FPG_BRUAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101296|sp|Q2YQP8|FPG_BRUA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691494|sp|B2S9T2|FPG_BRUA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789430|sp|C0RG65|FPG_BRUMB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17983995|gb|AAL53127.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|62197151|gb|AAX75451.1| MutM, formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 1 str. 9-941] gi|82617031|emb|CAJ12140.1| Formamidopyrimidine-DNA glycolase:Formamidopyrimidine-DNA glycolase, zinc binding domain:Sugar transporter superfamily [Brucella melitensis biovar Abortus 2308] gi|189020805|gb|ACD73527.1| formamidopyrimidine-DNA glycosylase [Brucella abortus S19] gi|225641973|gb|ACO01887.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis ATCC 23457] gi|237788589|gb|EEP62804.1| formamidopyrimidine-DNA glycosylase [Brucella abortus str. 2308 A] gi|260096390|gb|EEW80266.1| formamidopyrimidine-DNA glycosylase [Brucella abortus NCTC 8038] gi|260153097|gb|EEW88189.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. 16M] gi|260669395|gb|EEX56335.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 4 str. 292] gi|260671235|gb|EEX58056.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 2 str. 86/8/59] gi|260675962|gb|EEX62783.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 6 str. 870] gi|260874407|gb|EEX81476.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 9 str. C68] gi|260916736|gb|EEX83597.1| DNA-(apurinic or apyrimidinic site) lyase mutM [Brucella abortus bv. 3 str. Tulya] gi|262764924|gb|EEZ10845.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 3 str. Ether] gi|263003269|gb|EEZ15562.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 1 str. Rev.1] gi|263095432|gb|EEZ19033.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis bv. 2 str. 63/9] gi|297174575|gb|EFH33922.1| formamidopyrimidine-DNA glycosylase [Brucella abortus bv. 5 str. B3196] gi|326410182|gb|ADZ67247.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M28] gi|326539900|gb|ADZ88115.1| formamidopyrimidine-DNA glycosylase [Brucella melitensis M5-90] Length = 293 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 137/297 (46%), Positives = 182/297 (61%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR LSP+R S+ D++ +L I+ V+ AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRPGLSPMRAAGSVAGE----MDVMERLAGAIRSVIAQAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C CQ Sbjct: 236 GSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCASCQ 292 >gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] gi|122266079|sp|Q03GC2|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] Length = 275 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 158/288 (54%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ VT++ + + F+ GKKI++V RR KYL Sbjct: 1 MPELPEVETVRRGLAALVEGKIVTNVVVRYSKMVSPKAEIFAEELEGKKILNVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ G+ +++ HL M G + + + + +H+HV L + + + YND R Sbjct: 61 LIDFSGDYTMVSHLRMEGKYSVVD----RREEYGKHDHVIFELDDGKDLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV T + Q L+T+GPEP + YLTHQ + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLLDQSMIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P + + +L + L + I + L AI+A G+++ Y+ Sbjct: 172 GNIYADEVLWLSKIHPQQISNTLTDEE------IAILRESIFEELQLAIEAKGTTVFSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG G FQN VY + G PC CG I RI A R T +C +CQ Sbjct: 226 NADGHAGSFQNQLHVYHRQGLPCQ-RCGTPIERIKVAQRGTHFCPHCQ 272 >gi|260428860|ref|ZP_05782837.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] gi|260419483|gb|EEX12736.1| formamidopyrimidine-DNA glycosylase [Citreicella sp. SE45] Length = 283 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ T+ ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVMEGNTIAKALVNRPDLRWPFPERMAERLTGARVERLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGM+G ++ + + + + +H+HV + L + R+ + Sbjct: 61 LGDLDSGETLLIHLGMTGRMLVSGDALGRFVHDHPAPEKHDHVVLDLADGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG M+L+ T+ Q+P L LGPEP N+F+ +L + +K+ALL+QKI Sbjct: 116 NDPRRFGAMNLMPTATAEQHPLLAALGPEPLGNAFSESHLMAALSGRTMPIKSALLDQKI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+R + P R+ + + L+ I++VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRCGIHPGRRVSRISAKR------IASLVPVIRQVLEEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VYG+ G PC C + + RIVQ+GRS+FYC CQ+ Sbjct: 230 RDFRQADGELGYFQHSFDVYGREGAPCRTPGCTETVHRIVQSGRSSFYCPSCQR 283 >gi|92115680|ref|YP_575409.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91798574|gb|ABE60949.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter hamburgensis X14] Length = 293 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 129/298 (43%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQTVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + A ++ H+HV+ ++++ + Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGATAPGDCHHPRNEDRAHDHVSFTMSSGAS---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 VI+NDPRRFG+M ++ ++ P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -VIFNDPRRFGYMKVIARTVLNDEPLLKGLGPEPLGNEFDAAMLARACRDKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLASKTGGPADRAGRLVEAIHDVLNQAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GE C C ++R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTTGELGYFQHSFRVYDREGEKCRTPTCRGTVKRFTQNGRSTFWCPVCQK 293 >gi|325144563|gb|EGC66862.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240013] Length = 275 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PRCGGLVVKETLGQRGTFYCPNCQK 275 >gi|254363106|ref|ZP_04979160.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] gi|153094993|gb|EDN75556.1| DNA-formamidopyrimidine glycosylase [Mannheimia haemolytica PHL213] Length = 274 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + + LR+ S G KI V RRAKYL Sbjct: 1 MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQ-MAGAKITAVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + ++ HLGMSGS I K I +H+HV + N T + YNDPR Sbjct: 60 IIRTDKGDILV-HLGMSGSLGILQERQQKEI--GKHDHVDLITQNGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + ++ LR LGPEP N F A YL + KK + K ++ ++V G+ Sbjct: 112 KFGCWLWAEKAEDHE--LLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFIMTNEVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTKKQ------CERLVKTIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C +CG+ I V R+T++C CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGETCN-DCGKPIETKVIGQRNTYFCPKCQR 271 >gi|268593317|ref|ZP_06127538.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] gi|291311014|gb|EFE51467.1| DNA-formamidopyrimidine glycosylase [Providencia rettgeri DSM 1131] Length = 269 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 113/289 (39%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAVVRNSRLRWPVSEQI-KSLSDEAVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + + + + Y DPR Sbjct: 60 LIELQTG-WIIVHLGMSGSVRI----LTEELPEEKHDHVDLVMRDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP ++FN YL KK +K L++ K+V G+ Sbjct: 110 RFGA--WLWCDDLENSSVLAHLGPEPLSDAFNPQYLYELAQKKKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ K+SP + T +L T +L+Q+I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFATKISPEKITNTLTLAEIT------ELVQQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC S CG I I Q RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPC-SMCGTPIESIKQGQRSTFFCPQCQK 269 >gi|319785617|ref|YP_004145093.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171505|gb|ADV15043.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 296 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 139/298 (46%), Positives = 186/298 (62%), Gaps = 11/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +V++ T+ + R +LRF FP F+ GK I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQLVLEGATIARVEARRPDLRFPFPEKFAQRLAGKTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 ++LEG ++I HLGMSGSF IE + K+ H+HV + + T+ Sbjct: 61 TMDLEGGPALICHLGMSGSFRIETADGSDMPGIFRHDRSKSSNHDHVVFHVVSPAGTR-S 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM L L +P L LG EP N+ + L+ + S LK ALL Sbjct: 120 RVIFNDPRRFGFM-LFAEGLPDVHPMLAGLGVEPTGNTLDGALLSSLMKGRRSPLKAALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYV EALWRA LSP+R+ ++ + + L Q I+ V+ DAI AG Sbjct: 179 DQRLIAGLGNIYVSEALWRAGLSPLREAGTIARPGKKAQAQSEHLAQAIRSVISDAIAAG 238 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRDY+ DGS+GYFQ+AF+VY + GE C +CG I R+VQ+GRSTFYC CQ+ Sbjct: 239 GSSLRDYMQTDGSLGYFQHAFAVYDREGEACSKPSCGGHIERVVQSGRSTFYCRTCQR 296 >gi|120556654|ref|YP_961005.1| formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] gi|166215632|sp|A1U749|FPG_MARAV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120326503|gb|ABM20818.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8] Length = 270 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 155/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + T+ + + +LR+ P + GK I V RRAKYL Sbjct: 1 MPELPEVETTRQGIAPHCEGQTIQRVIVRNPSLRWPVPADLAEHLEGKTIRAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LE S+IVHLGMSGS + H+HV + L N+ R+ +NDPR Sbjct: 61 FLHLETG-SVIVHLGMSGSLRVITDDSPAMT----HDHVELVLGNHR-----RLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ ++P + LGPEP FN +L +K + +K+ +++ +V G+ Sbjct: 111 RFGC--WLWTTDWNRHPLISALGPEPLSEDFNGAWLFRLSRQKQTPVKSFIMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P RK + D +KL + I++ L AI GG++LRD+V Sbjct: 169 GNIYANEALFKAGIHPKRKAGRIS------LDRYHKLAEAIRETLSAAILMGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF + VYGK G PC C ++ I RST YC CQ+ Sbjct: 223 NSDGKPGYFAQSLLVYGKAGAPCTE-CNTPLKEIRMNNRSTVYCPRCQR 270 >gi|259417901|ref|ZP_05741820.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] gi|259346807|gb|EEW58621.1| formamidopyrimidine-DNA glycosylase [Silicibacter sp. TrichCH4B] Length = 283 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 119/294 (40%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ +T ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGEVITRADVNRPDLRWPFPDRMADRLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + +H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHAHPQIAKHDHVVFHMENGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL++T+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLDTATADSHKLLAVLGPEPLGNDFHENHLVTAFKGRKTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE L+RA +SP R+ + + L+ I++VL+DAI AGGSSL Sbjct: 176 IAGLGNIYVCETLFRAGISPRREVGKISAPR------VAALVPIIRQVLLDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC CG + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCGGTVTRITQSGRSSFYCGKCQR 283 >gi|27375873|ref|NP_767402.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] gi|39931278|sp|Q89WC9|FPG_BRAJA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27349011|dbj|BAC46027.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 128/298 (42%), Positives = 176/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F A +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVVAEARRPDLRFPFQPDFVARLQGQVVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKY 112 + +L +++HLGMSGSF + ++ + P+ H+HV +++ + Sbjct: 61 MADLASGDVLLMHLGMSGSFRVIKPDNDAAPGEFHYPRGKDTTHDHVLFRMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFG+M ++ + P LR LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGYMKVIARNALEDEPLLRGLGPEPLGNEFDAAMLARSCEGKATSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL R+ LSP R +L G P D +L+ I VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALHRSHLSPRRIAATLATRKGEPTDHAKRLVGAIHTVLNDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GE C CG I+R Q GRSTF+C CQK Sbjct: 236 GSSLRDHRQTTGELGYFQHSFKVYDREGETCKTPACGGTIKRFTQNGRSTFWCPKCQK 293 >gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] gi|188023541|gb|EDU61581.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] Length = 269 Score = 324 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTICYAIVRNSRLRWPVSEQI-KSLSDEMILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ II+HLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELKNG-WIIIHLGMSGSLRI----LLEELPEEKHDHVDLVLKDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + FNA YL Q K+ +K L++ K+V G+ Sbjct: 110 RFGA--WLWCDDLETSRVLSHLGPEPLSDEFNAQYLFEQAGKRKIAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP + T +L L+Q+I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFAAGISPEKITHTLTLEQSID------LVQQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPCL CG I I Q RSTFYC CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPCL-ICGTPILSIKQGQRSTFYCPQCQK 269 >gi|325130340|gb|EGC53106.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis OX99.30304] gi|325208256|gb|ADZ03708.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis NZ-05/33] Length = 280 Score = 324 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|313668434|ref|YP_004048718.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica ST-640] gi|313005896|emb|CBN87352.1| formamidopyrimidine-DNA glycosylase [Neisseria lactamica 020-06] Length = 275 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ PC+ CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNLPCV-RCGGLVVKETLGQRGTFYCPNCQK 275 >gi|325136200|gb|EGC58808.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M0579] Length = 280 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + K +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|121635008|ref|YP_975253.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|120866714|emb|CAM10466.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis FAM18] gi|325138277|gb|EGC60846.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis ES14902] gi|325142419|gb|EGC64823.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 961-5945] Length = 280 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|126738631|ref|ZP_01754336.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] gi|126720430|gb|EBA17136.1| formamidopyrimidine-DNA glycosylase [Roseobacter sp. SK209-2-6] Length = 283 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G +++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGAVIKEARVNRPDLRWPFPERMAERLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L EL+ ++++HLGMSG + + + +H+HV + N R+ + Sbjct: 61 LAELDTAETLLIHLGMSGRMTVSGDPLGQFVHEHPQAQKHDHVIFDMANGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F KN+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETATADSHKLLAVLGPEPLGNDFHEEHLIAAFRGKNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+R +SP RK + + + L+ I+KVL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALYRCAISPKRKAGQISETR------VASLVPVIRKVLEDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ++F VYG+ GE C CG I RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHSFDVYGREGEACRRDGCGGTISRITQSGRSSFYCGKCQR 283 >gi|300714652|ref|YP_003739455.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] gi|299060488|emb|CAX57595.1| Formamidopyrimidine-DNA glycosylase [Erwinia billingiae Eb661] Length = 269 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNDRLRWPVSLEIQS-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LIELPHG-WIIIHLGMSGSLRV----LPEELPPAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++F+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCTDLAASNVLAHLGPEPLHDAFSAEYLFDKSRNKRTPVKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L Q+ L++ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGIHPDRPAMTLTQDEA------ALLVKTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I+ A RSTFYC CQK Sbjct: 222 QTDGKPGYFAQELQVYGRAGEPC-RVCATPIKSAKHAQRSTFYCPTCQK 269 >gi|254464049|ref|ZP_05077460.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] gi|206684957|gb|EDZ45439.1| formamidopyrimidine-DNA glycosylase [Rhodobacterales bacterium Y4I] Length = 283 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ + ++R +LR+ FP + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVKRGLAPAMEGAVILKAAVNRPDLRWPFPPAMAERLTGARVNALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ + ++++HLGMSG + + + +H+HV + + N R+ + Sbjct: 61 LADLDTDETLLIHLGMSGRMTVSGDPLGQFVHEHPQAEKHDHVVLDMDNGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F +N+ +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAAADSHKLLSVLGPEPLGNDFHEDHLVAAFRGRNTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCE+L+RA +SP RK + + + L+ I++VL +AI AGGSSL Sbjct: 176 IAGLGNIYVCESLFRAGISPRRKAGQIAAHR------VASLVPIIRQVLQEAIRAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ G +GYFQ++F YG+ GEPC C I RI Q+GRSTFYC CQ+ Sbjct: 230 KDFRQASGELGYFQHSFDAYGREGEPCRREGCAGSIARITQSGRSTFYCVKCQR 283 >gi|254805097|ref|YP_003083318.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] gi|254668639|emb|CBA06272.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha14] Length = 275 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC+ CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCSNCQK 275 >gi|89056701|ref|YP_512152.1| formamidopyrimidine-DNA glycosylase [Jannaschia sp. CCS1] gi|122497359|sp|Q28JI5|FPG_JANSC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|88866250|gb|ABD57127.1| DNA-(apurinic or apyrimidinic site) lyase [Jannaschia sp. CCS1] Length = 283 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ + ++R +LR+ FP + + G + + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPVLEGARIAQAAVNRPDLRWPFPDNMAQRLTGATVTALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG I +H+HV + R+ + Sbjct: 61 LADLDTGETLLIHLGMSGRMQISGDVIGSFHHTHPAAAKHDHVVL-----DTDAGARITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL++T+ + Q+ LR LGPEP N+FN +L F K S +K ALL+Q+I Sbjct: 116 NDARRFGAMDLMDTATQDQHWLLRDLGPEPLGNAFNEAHLVAAFKGKRSPVKTALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V+G+GNIYVCEALWRA +SP+R+ + + L+ I+ VL +AI+AGGSSL Sbjct: 176 VSGLGNIYVCEALWRAGISPLRQAGKIAAVR------VATLVPIIRDVLTEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ+ F VYG+ G+ C +C + I R VQ+GRS+FYC CQ+ Sbjct: 230 RDHRQATGELGYFQHTFRVYGREGQRCQTPDCAEKILRKVQSGRSSFYCPACQR 283 >gi|308389416|gb|ADO31736.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha710] gi|325204297|gb|ADY99750.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M01-240355] Length = 275 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|972980|gb|AAB01505.1| putative formamidopyrimidine-DNA glycosylase; similar to Escherichia coli fpg gene, Swiss-Prot Accession Number P05523 [Neisseria meningitidis serogroup B] gi|1586496|prf||2204218A formamidopyrimidine-DNA glycosylase Length = 275 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQKG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|254673150|emb|CBA07967.1| Formamidopyrimidine-DNA glycosylase [Neisseria meningitidis alpha275] gi|325132503|gb|EGC55196.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis M6190] gi|325198448|gb|ADY93904.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis G2136] Length = 275 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F A YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|99082869|ref|YP_615023.1| formamidopyrimidine-DNA glycosylase [Ruegeria sp. TM1040] gi|123077367|sp|Q1GC55|FPG_SILST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|99039149|gb|ABF65761.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Ruegeria sp. TM1040] Length = 283 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 120/294 (40%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L M+ + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVMRGLQPSMEGVVIARADVNRPDLRWPFPDRMTERLSGRRVLSMRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ +++VHLGMSG + + + + +H+HV + N RV + Sbjct: 61 LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHSHPQLEKHDHVVFHMDNGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ET+ + L LGPEP N F+ +L F + + +K+ALL+Q I Sbjct: 116 NDPRRFGAMDLLETAKADSHKLLAVLGPEPLGNDFHESHLVSAFKGRRTPVKSALLDQGI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+RA +SP R+ + + T L+ I++VL DAI AGGSSL Sbjct: 176 IAGLGNIYVCEALFRAGISPRREAGKISTSRVTS------LVPIIRQVLQDAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +G +GYFQ+ F VYG+ GEPC C + RI Q+GRS+FYC CQ+ Sbjct: 230 KDFRQANGELGYFQHTFDVYGREGEPCRRAGCTGTVTRITQSGRSSFYCGKCQR 283 >gi|28378223|ref|NP_785115.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257325|sp|Q88WV4|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28271058|emb|CAD63963.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 274 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNVVPRGEDQ----GKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL D + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLT------TDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|294671315|ref|ZP_06736166.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306947|gb|EFE48190.1| hypothetical protein NEIELOOT_03023 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 273 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ + + LR P G+ ++ +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHISGKTIVRTTVRQAKLRHPVPPDLDDTLNGETVLRCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +++HLGMSGS + + A +H+HV I ++ T + Y+DPR Sbjct: 61 LVHLPQG-ILLIHLGMSGSLRLFTSGNAP--DAGKHDHVEIEFSDGT-----LLRYHDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L+ L PEP N F A YL + K+ S +K+ L++ K V G+ Sbjct: 113 RFGIVSWYP-GPEETHPLLQNLAPEPLGNGFTADYLHNALKKRRSPIKSVLMDNKTVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A ++P R + + L+ I++ L AI+ GGS+LRD+V Sbjct: 172 GNIYANESLFAAGIAPNRPAMQISRKEA------AALVHHIRETLRRAIEKGGSTLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VYG+ G+PCL CG I + V R TFYC CQ Sbjct: 226 DSEGKSGYFQQEYKVYGRQGQPCL-QCGGGIEKTVIGQRGTFYCPNCQ 272 >gi|294789507|ref|ZP_06754743.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] gi|294482587|gb|EFG30278.1| DNA-formamidopyrimidine glycosylase [Simonsiella muelleri ATCC 29453] Length = 272 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 158/289 (54%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N +T + + + LR+ P +G+ + RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHILNQKITQVIVRQPKLRWKMPDDLVQILQGQVVRHCRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ +++HLGMSGS I H + + +H+H + T + Y+DPR Sbjct: 61 LIELDAG-VLMIHLGMSGSLRIFH---GRQPEAGKHDHFDAIFADGT-----LLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + L+ LG EP + F A YL +Q KN +K +++ IV G+ Sbjct: 112 RFGAILWLAGVAEH-HDLLKNLGVEPLSDEFTASYLLNQLRGKNRAIKLMIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A L P R SL N+ L+ I+ +L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAALLPNRPANSLSLND------CENLVSAIKHILQRAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ + VYG+ GE C CG +I + V R TFYC CQK Sbjct: 225 NSDGKSGYFQQEYKVYGRAGETC-KMCGSLIEKTVLGQRGTFYCANCQK 272 >gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] Length = 274 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ I + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + + +H HV LT++ + ++YND R Sbjct: 61 LFRFSNGLTMVSHLRMEGKYNVVPRGEDQ----GKHTHVIFHLTDDRD-----LLYNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + LRT+GPEP Y+T F K +K LL+Q +AGI Sbjct: 112 KFGRMTLVPTGEESTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P+R SL D + L Q I + AI G+++ + Sbjct: 172 GNIYADETLWMSKIHPMRPANSLT------TDEIATLRQNIIDEMAMAIKGHGTTVHSFS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN VYG+ GEPC CG +I +I A R T +C Q+ Sbjct: 226 TAFGEAGQFQNHLHVYGREGEPC-ERCGTIIEKIKVAQRGTHFCPLEQR 273 >gi|296100497|ref|YP_003610643.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054956|gb|ADF59694.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 269 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHATVRNGRLRWPVSDEIHA-LSDKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHSVLAHLGPEPLSEAFNAEYLKAKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] Length = 279 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ T+ + + + F+A + K I + RR KYL Sbjct: 1 MPELPEVETVRRGLVGLVEGRTIQRVVVRYPKMVTPEADQFAAELKNKTIETIRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + LS++ HL M G + + +H+HV L + + + YND R Sbjct: 61 IFDFSNQLSMVSHLRMEGKYAVVDRDQPYN----KHDHVIFELDDGQDLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L T + Q L+T+GPEP + YLT + +K+ LL+Q ++AG+ Sbjct: 112 KFGRMVLTPTGQEMQVGGLKTIGPEPTPETLTLDYLTKALRSRKRVMKSFLLDQSLIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P R++ SL + L + I L +AI A G+++ Y+ Sbjct: 172 GNIYADEVLWLSKIHPQRRSNSLTDAE------IKLLRESIFAELNEAIAAKGTTVFSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VY + G PC C I +I A RST +C +CQ Sbjct: 226 DATGHAGSFQNQLHVYHRQGLPC-PRCQTPIEQIKVAQRSTHFCPHCQ 272 >gi|77464917|ref|YP_354421.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides 2.4.1] gi|90101315|sp|Q3IY64|FPG_RHOS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77389335|gb|ABA80520.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodobacter sphaeroides 2.4.1] Length = 283 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEA------EGLVPLIREVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|221640838|ref|YP_002527100.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] gi|254789449|sp|B9KQJ9|FPG_RHOSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221161619|gb|ACM02599.1| Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides KD131] Length = 283 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAES------EGLVPLIREVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|115522499|ref|YP_779410.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] gi|122297836|sp|Q07UF4|FPG_RHOP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115516446|gb|ABJ04430.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisA53] Length = 293 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 129/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + L R +LRF F F+ G+ + +SRRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGARFDTVALRRADLRFPFQPDFTDRLTGQTVTGLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L ++++HLGMSGSF + ++ H+HV S+++ Sbjct: 61 LADLSSGDALLMHLGMSGSFRVIEPGGEATPGDFHHPRSEDRSHDHVVFSMSSGKT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M L + P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 117 -VVFNDPRRFGYMKLFRRAAIEDEPFLKGLGPEPLGNAFDASMLARACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P + KL++ I+ VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPKRLAATLATKAGGPTERAEKLVEAIRTVLHEAIQAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+VY + EPC + CG +++R VQ GRSTF C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDRESEPCRTKGCGGVVKRFVQNGRSTFCCPKCQK 293 >gi|331675115|ref|ZP_08375872.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] gi|331068024|gb|EGI39422.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA280] Length = 269 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEEFPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L Q I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLTQVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|332559816|ref|ZP_08414138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] gi|332277528|gb|EGJ22843.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rhodobacter sphaeroides WS8N] Length = 283 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 177/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHDHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAAHLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPARLAGSLSRAEA------EGLVPLIREVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|261341756|ref|ZP_05969614.1| hypothetical protein ENTCAN_08235 [Enterobacter cancerogenus ATCC 35316] gi|288316124|gb|EFC55062.1| DNA-formamidopyrimidine glycosylase [Enterobacter cancerogenus ATCC 35316] Length = 269 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHA-LSDKPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHSALAHLGPEPLSEAFNADYLRAKCAKKKAPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRQCQK 269 >gi|126460786|ref|YP_001041900.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] gi|166198739|sp|A3PFL2|FPG_RHOS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126102450|gb|ABN75128.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17029] Length = 283 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 178/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + ++R +LR+ FP + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + +H+HV + + R+ + Sbjct: 61 LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHGHPAPSRHDHVVLEMEGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P R SL + L+ I++VL++AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPGRLAGSLSRAEA------EGLVPLIREVLLEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G PC+ C + RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR 283 >gi|153008052|ref|YP_001369267.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] gi|151559940|gb|ABS13438.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum anthropi ATCC 49188] Length = 302 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 137/298 (45%), Positives = 184/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP HF G++I + RRAKYL Sbjct: 10 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDHFVERLSGRRISALGRRAKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE + K H+HV L Sbjct: 70 TIHLDDGLSVISHLGMSGSFRIETDDDGGTPGEFHHERSKLSAHDHVVFHLLRADGAPA- 128 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFM E +P L +LG EP N + L F + + LK ALL Sbjct: 129 RIVYNDPRRFGFMLFAEEGTLDSHPLLASLGIEPTGNLLSGTILAELFKGRRTPLKAALL 188 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP++ S+ QN I+ +L +I+ V+ +AI AG Sbjct: 189 DQRLIAGLGNIYVCEALWRSHLSPMQTAGSVAQNPA----IMEQLAADIRTVIAEAIAAG 244 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC C ++ R VQ+GRSTF+C CQ+ Sbjct: 245 GSTLKDYIQADGALGYFQHSFSVYGREGEPCKNPACNGIVERAVQSGRSTFFCASCQQ 302 >gi|86747745|ref|YP_484241.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] gi|123408924|sp|Q2J2I0|FPG_RHOP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|86570773|gb|ABD05330.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris HaA2] Length = 293 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 131/297 (44%), Positives = 179/297 (60%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F F+A G+ I + RRAKYL Sbjct: 1 MPELPEVETVRLGLQPAMEGFRIDRAMANRCDLRFPFQPDFAARLTGQTITGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + + ++ H+HV +++ Sbjct: 61 LADLSSGDVLLMHLGMSGSFRVVNGAGDATPGEFHHPRSEDRTHDHVVFEMSSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM + + P L+ LGPEP N+F+A L K ++LK ALL Sbjct: 116 RVIFNDPRRFGFMKIFARAAIDDEPHLKGLGPEPLGNAFDAAMLARACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP RK +L G P D +L+ I+ VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALWRAHLSPKRKASTLADRKGAPTDRAVRLVDAIRAVLGDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ G +GYFQ++F+VY + GE C C ++R+VQ GRSTF+C+ CQ Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDREGERCRTPGCNGTVKRLVQNGRSTFWCSGCQ 292 >gi|218768318|ref|YP_002342830.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|9910674|sp|P57014|FPG_NEIMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121052326|emb|CAM08656.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis Z2491] gi|319410563|emb|CBY90931.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase; DNA-(apurinic or apyrimidinic site) lyase MutM; AP lyase MutM) [Neisseria meningitidis WUE 2594] Length = 275 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + ++ +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|146337247|ref|YP_001202295.1| formamidopyrimidine-DNA glycosylase [Bradyrhizobium sp. ORS278] gi|166215612|sp|A4YJG9|FPG_BRASO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146190053|emb|CAL74045.1| Bifunctional mutM protein:Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase); (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Bradyrhizobium sp. ORS278] Length = 293 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 129/298 (43%), Positives = 178/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LRF F F +G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGAKIVTAEARRGDLRFPFQPDFVKRLQGQTVRGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFII---EHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + EH P+ H+HV +++ + Sbjct: 61 LADLGSGDVLLMHLGMSGSFRVIKPEHEETPGEFHYPRGKDSVHDHVVFHMSSGAD---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFGFM ++ P L+ LGPEP N F+A L K ++LK ALL Sbjct: 117 -IVFNDPRRFGFMKIIGRGEIETEPHLKDLGPEPLGNEFDAAMLARACAGKKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA LSP R +L G P D +L++ I VL +AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFRAHLSPRRLAATLATRKGEPTDHAKRLVEAIHTVLNEAIRAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F VY + GEPC + C +++R VQ GRSTF+C CQ+ Sbjct: 236 GSSLRDHRQTTGELGYFQHSFQVYDREGEPCRTDGCEGVVKRFVQNGRSTFWCPKCQR 293 >gi|161870169|ref|YP_001599339.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] gi|161595722|gb|ABX73382.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis 053442] Length = 275 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 275 >gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] Length = 269 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSAEIHS-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRILPDD----LPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKTLEGHPVLAHLGPEPLSDAFNVDYLREKCTKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D +L++ I+ VL +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLS------ADECERLVRAIKTVLKRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKDEPC-RVCGTPITATKHAQRATFYCRRCQK 269 >gi|304387407|ref|ZP_07369598.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] gi|304338500|gb|EFM04619.1| DNA-formamidopyrimidine glycosylase [Neisseria meningitidis ATCC 13091] Length = 280 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 6 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 66 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 120 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 179 GNIYANESLFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFV 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PC CG ++ + R TFYC CQK Sbjct: 233 DSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETLGQRGTFYCPNCQK 280 >gi|90421901|ref|YP_530271.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB18] gi|122477567|sp|Q21CD4|FPG_RHOPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90103915|gb|ABD85952.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB18] Length = 293 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 125/298 (41%), Positives = 172/298 (57%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + R +LRF + G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPAMAGARIDGFEARRADLRFALQPDLATRLIGQTVKGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L EL +++HLGMSGSF + + + H+HV ++N Sbjct: 61 LAELSSGDVLLMHLGMSGSFRVLQGEASGAPGAFHHPRNDDRAHDHVVFRMSNGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M ++ P L+ LGPEP NSF+A L + ++LK ALL Sbjct: 117 -VVFNDPRRFGYMKILAPGEIADEPFLKGLGPEPLGNSFDAAMLASACAGRKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+ A LSP R +L G P + +L++ I+ VL AI AG Sbjct: 176 DQRVVAGLGNIYVCEALFGAHLSPKRLAATLATRTGAPTERAERLVEAIRAVLHAAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+VY + GEPC S C +++R VQ GRSTF+C CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAVYDREGEPCRSKGCDGVVKRFVQNGRSTFWCPKCQK 293 >gi|331665260|ref|ZP_08366161.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] gi|331057770|gb|EGI29756.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA143] Length = 269 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQTVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLAWVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus amyloliquefaciens TA208] Length = 276 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 156/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYGLHQADEP----DDKHVHVVFNMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K SL + KL EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANSLSDGQ------IKKLHTEIKDTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 274 >gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638] gi|166988461|sp|A4W514|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 269 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSNEIHT-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSEAFNAEYLKARCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEQE------CEILVKVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVASKHAQRATFYCRQCQK 269 >gi|237728932|ref|ZP_04559413.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] gi|226909554|gb|EEH95472.1| formamidopyrimidine-DNA glycosylase [Citrobacter sp. 30_2] Length = 269 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELADG-WIIIHLGMSGSLRI----LPEELPADKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELDGHNVLAHLGPEPLSDDFNANYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R T SL KD L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLTSSLS------KDECELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RACGAPIVATKHAQRTTFYCRRCQK 269 >gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] gi|122449230|sp|Q1WUN7|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ N + DI + + F K I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIVNEESEFIEKLTNKTIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + +E ++ + +H HV T+ T+ + YND R Sbjct: 61 LFRFSSDLTMISHLRMEGKYFVEPST----KEVEKHTHVVFDFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+ Sbjct: 112 KFGRMQLVKTGMEIQTAGLAKLGPEPKEKTFIVEDFSKNLKRRKKAIKNALLDQTIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K+ P L + + L I K L A +AGG+++R Y Sbjct: 172 GNIYADEVLWMSKIHPETPANKLTEEE------VKVLRDNIIKELALATEAGGTTIRSYT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G FQ + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 226 DAFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 272 >gi|42519527|ref|NP_965457.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] gi|81703799|sp|Q74IB5|FPG_LACJO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41583816|gb|AAS09423.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii NCC 533] Length = 276 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHP------LSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEECN-NCGTILEKIKVNGRGTTFCPHCQ 272 >gi|283836014|ref|ZP_06355755.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] gi|291068196|gb|EFE06305.1| DNA-formamidopyrimidine glycosylase [Citrobacter youngae ATCC 29220] Length = 269 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATIMHATVRNGRLRWPVSEEIY-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEELPADKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ + L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTTELDGHNVLAHLGPEPLSDDFNAGYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL KD L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLS------KDECGLLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RICGTPIVAAKHAQRTTFYCRRCQK 269 >gi|193070399|ref|ZP_03051341.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] gi|192956338|gb|EDV86799.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E110019] Length = 269 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILRAVVRNGRLRWPVSEELY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|157373071|ref|YP_001481060.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] gi|166988464|sp|A8GLE2|FPG_SERP5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157324835|gb|ABV43932.1| formamidopyrimidine-DNA glycosylase [Serratia proteamaculans 568] Length = 269 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIELASG-WIIVHLGMSGSLRM----LAEETEAGKHDHVDLVISNGMTLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP +F YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCDDLATSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAGSLSKVEAEV------LVATIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIESAKHGQRSTFFCPRCQR 269 >gi|268319915|ref|YP_003293571.1| hypothetical protein FI9785_1445 [Lactobacillus johnsonii FI9785] gi|262398290|emb|CAX67304.1| mutM [Lactobacillus johnsonii FI9785] Length = 276 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T++ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTISKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKYHLVTPDQPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHP------LSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEECN-NCGTILEKIKVNGRGTTFCPHCQ 272 >gi|300939234|ref|ZP_07153914.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] gi|300455876|gb|EFK19369.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 21-1] Length = 269 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLTHLGPEPLSDDFNGEYLYQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|146278626|ref|YP_001168785.1| formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] gi|166198740|sp|A4WVR6|FPG_RHOS5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145556867|gb|ABP71480.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodobacter sphaeroides ATCC 17025] Length = 283 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 122/294 (41%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M +++ ++R +LR+ P + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLEPAMAGRLISEARVNRPDLRWPLPPRMAERLTGQRVLRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L G S+++HLGMSG ++ + + +H+HV + + RV + Sbjct: 61 LADLSGGESLLIHLGMSGRMLVSGARVGDFVHDHPAPARHDHVVLEMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T +P L +LGPEP N+F+ YL + + + +K ALL+Q+I Sbjct: 116 NDARRFGAMDLVPTEAAETHPLLASLGPEPLGNAFDGAYLAARLTGRRTPVKAALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA L+P+R SL + L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGLAPVRLAGSLGEARAAG------LVPIIREVLSEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VYG+ G+PC+ C ++ RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQADGELGYFQHTFRVYGREGQPCVTPGCRGLVGRIVQSGRSSFHCPECQR 283 >gi|15804176|ref|NP_290215.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 EDL933] gi|15833764|ref|NP_312537.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30065089|ref|NP_839260.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56480390|ref|NP_709414.2| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 301] gi|74314131|ref|YP_312550.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei Ss046] gi|82545998|ref|YP_409945.1| formamidopyrimidine-DNA glycosylase [Shigella boydii Sb227] gi|91213151|ref|YP_543137.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UTI89] gi|110807687|ref|YP_691207.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 5 str. 8401] gi|117625909|ref|YP_859232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157158292|ref|YP_001465115.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|168748717|ref|ZP_02773739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|168753459|ref|ZP_02778466.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|168759732|ref|ZP_02784739.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|168766055|ref|ZP_02791062.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|168772399|ref|ZP_02797406.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|168779790|ref|ZP_02804797.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|168785511|ref|ZP_02810518.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|170018135|ref|YP_001723089.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170684053|ref|YP_001745935.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187731323|ref|YP_001882332.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|188491930|ref|ZP_02999200.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|191167823|ref|ZP_03029629.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|191170358|ref|ZP_03031911.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194430989|ref|ZP_03063282.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|195936196|ref|ZP_03081578.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4024] gi|208814029|ref|ZP_03255358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208820753|ref|ZP_03261073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209398868|ref|YP_002273113.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209921106|ref|YP_002295190.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SE11] gi|215488914|ref|YP_002331345.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217324519|ref|ZP_03440603.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218551163|ref|YP_002384954.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218556197|ref|YP_002389110.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI1] gi|218560707|ref|YP_002393620.1| formamidopyrimidine-DNA glycosylase [Escherichia coli S88] gi|218691919|ref|YP_002400131.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ED1a] gi|218707269|ref|YP_002414788.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMN026] gi|237703405|ref|ZP_04533886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254038834|ref|ZP_04872886.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|254795590|ref|YP_003080427.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|260857970|ref|YP_003231861.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260870365|ref|YP_003236767.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|261224182|ref|ZP_05938463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK2000] gi|261254793|ref|ZP_05947326.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. FRIK966] gi|291285006|ref|YP_003501824.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|293407258|ref|ZP_06651182.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|293413069|ref|ZP_06655737.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|293417096|ref|ZP_06659723.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|298383004|ref|ZP_06992599.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300815126|ref|ZP_07095351.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300822405|ref|ZP_07102545.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300898569|ref|ZP_07116900.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300907676|ref|ZP_07125304.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300919798|ref|ZP_07136273.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300983558|ref|ZP_07176650.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|301303868|ref|ZP_07209987.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|306816017|ref|ZP_07450155.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|309797624|ref|ZP_07692012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|312968024|ref|ZP_07782235.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|331649450|ref|ZP_08350536.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331670475|ref|ZP_08371314.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331679726|ref|ZP_08380396.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|54037117|sp|P64149|FPG_SHIFL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040771|sp|P64148|FPG_ECO57 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101316|sp|Q31UZ1|FPG_SHIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101318|sp|Q3YVZ7|FPG_SHISS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122421890|sp|Q1R4V8|FPG_ECOUT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122957052|sp|Q0SYG3|FPG_SHIF8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215623|sp|A1AHG8|FPG_ECOK1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988459|sp|A7ZTI6|FPG_ECO24 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044588|sp|B1IZF8|FPG_ECOLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706479|sp|B7MFJ6|FPG_ECO45 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706481|sp|B7M4B9|FPG_ECO8A RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706482|sp|B7NET9|FPG_ECOLU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706483|sp|B1LK72|FPG_ECOSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706484|sp|B7LVJ6|FPG_ESCF3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066643|sp|B5YWD3|FPG_ECO5E RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238066644|sp|B6I3L2|FPG_ECOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691677|sp|B2TTU9|FPG_SHIB3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789436|sp|B7ULJ0|FPG_ECO27 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789438|sp|B7N2X1|FPG_ECO81 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12518391|gb|AAG58779.1|AE005591_3 formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. EDL933] gi|13363985|dbj|BAB37933.1| formamidopyrimidine DNA glycosylase [Escherichia coli O157:H7 str. Sakai] gi|30043350|gb|AAP19071.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|56383941|gb|AAN45121.2| formamidopyrimidine DNA glycosylase [Shigella flexneri 2a str. 301] gi|73857608|gb|AAZ90315.1| formamidopyrimidine DNA glycosylase [Shigella sonnei Ss046] gi|81247409|gb|ABB68117.1| formamidopyrimidine DNA glycosylase [Shigella boydii Sb227] gi|91074725|gb|ABE09606.1| formamidopyrimidine DNA glycosylase [Escherichia coli UTI89] gi|110617235|gb|ABF05902.1| formamidopyrimidine DNA glycosylase [Shigella flexneri 5 str. 8401] gi|115515033|gb|ABJ03108.1| formamidopyrimidine-DNA glycosylase [Escherichia coli APEC O1] gi|157080322|gb|ABV20030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E24377A] gi|169753063|gb|ACA75762.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ATCC 8739] gi|170521771|gb|ACB19949.1| formamidopyrimidine-DNA glycosylase [Escherichia coli SMS-3-5] gi|187428315|gb|ACD07589.1| formamidopyrimidine-DNA glycosylase [Shigella boydii CDC 3083-94] gi|187771367|gb|EDU35211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4196] gi|188016969|gb|EDU55091.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4113] gi|188487129|gb|EDU62232.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 53638] gi|189002553|gb|EDU71539.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4076] gi|189358964|gb|EDU77383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4401] gi|189364460|gb|EDU82879.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4486] gi|189369599|gb|EDU88015.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4501] gi|189374639|gb|EDU93055.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC869] gi|190902166|gb|EDV61909.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B7A] gi|190909166|gb|EDV68752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli F11] gi|194420444|gb|EDX36520.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1012] gi|208735306|gb|EDZ83993.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4045] gi|208740876|gb|EDZ88558.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4042] gi|209160268|gb|ACI37701.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4115] gi|209754668|gb|ACI75646.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754670|gb|ACI75647.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754672|gb|ACI75648.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754674|gb|ACI75649.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209754676|gb|ACI75650.1| formamidopyrimidine DNA glycosylase [Escherichia coli] gi|209914365|dbj|BAG79439.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE11] gi|215266986|emb|CAS11431.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|217320740|gb|EEC29164.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. TW14588] gi|218358704|emb|CAQ91360.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia fergusonii ATCC 35469] gi|218362965|emb|CAR00602.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|218367476|emb|CAR05258.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218429483|emb|CAV17991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|218434366|emb|CAR15290.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|226838799|gb|EEH70826.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 1_1_43] gi|226902669|gb|EEH88928.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 3_2_53FAA] gi|254594990|gb|ACT74351.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. TW14359] gi|257756619|dbj|BAI28121.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257766721|dbj|BAI38216.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|281180681|dbj|BAI57011.1| formamidopyrimidine DNA glycosylase [Escherichia coli SE15] gi|281602998|gb|ADA75982.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri 2002017] gi|284923668|emb|CBG36765.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 042] gi|290764879|gb|ADD58840.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) [Escherichia coli O55:H7 str. CB9615] gi|291426069|gb|EFE99103.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1412] gi|291431127|gb|EFF04120.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B185] gi|291468716|gb|EFF11209.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B354] gi|294492817|gb|ADE91573.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IHE3034] gi|298276840|gb|EFI18358.1| formamidopyrimidine-DNA glycosylase [Escherichia coli FVEC1302] gi|300306882|gb|EFJ61402.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 200-1] gi|300357755|gb|EFJ73625.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 198-1] gi|300400612|gb|EFJ84150.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 84-1] gi|300413151|gb|EFJ96461.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 115-1] gi|300525052|gb|EFK46121.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 119-7] gi|300532018|gb|EFK53080.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 107-1] gi|300840831|gb|EFK68591.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 124-1] gi|305850413|gb|EFM50870.1| formamidopyrimidine-DNA glycosylase [Escherichia coli NC101] gi|307628708|gb|ADN73012.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UM146] gi|308118811|gb|EFO56073.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 145-7] gi|309704037|emb|CBJ03383.1| formamidopyrimidine-DNA glycosylase [Escherichia coli ETEC H10407] gi|312287283|gb|EFR15192.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 2362-75] gi|313647491|gb|EFS11941.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2a str. 2457T] gi|315254021|gb|EFU33989.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 85-1] gi|315285378|gb|EFU44823.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 110-3] gi|320176306|gb|EFW51366.1| Formamidopyrimidine-DNA glycosylase [Shigella dysenteriae CDC 74-1112] gi|320179971|gb|EFW54913.1| Formamidopyrimidine-DNA glycosylase [Shigella boydii ATCC 9905] gi|320186825|gb|EFW61545.1| Formamidopyrimidine-DNA glycosylase [Shigella flexneri CDC 796-83] gi|320191314|gb|EFW65964.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC1212] gi|320193858|gb|EFW68491.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli WV_060327] gi|320201340|gb|EFW75921.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli EC4100B] gi|320639542|gb|EFX09150.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. G5101] gi|320644981|gb|EFX14011.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. 493-89] gi|320650248|gb|EFX18737.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H- str. H 2687] gi|320655600|gb|EFX23528.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661334|gb|EFX28758.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O55:H7 str. USDA 5905] gi|320666348|gb|EFX33347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli O157:H7 str. LSU-61] gi|323155286|gb|EFZ41469.1| formamidopyrimidine-DNA glycosylase [Escherichia coli EPECa14] gi|323166882|gb|EFZ52621.1| formamidopyrimidine-DNA glycosylase [Shigella sonnei 53G] gi|323179395|gb|EFZ64962.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1180] gi|323944088|gb|EGB40168.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H120] gi|323949874|gb|EGB45758.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H252] gi|323954825|gb|EGB50605.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H263] gi|324008140|gb|EGB77359.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 57-2] gi|324012605|gb|EGB81824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 60-1] gi|324019744|gb|EGB88963.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 117-3] gi|324111529|gb|EGC05510.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii B253] gi|324116026|gb|EGC09952.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1167] gi|325499442|gb|EGC97301.1| formamidopyrimidine-DNA glycosylase [Escherichia fergusonii ECD227] gi|326337366|gb|EGD61201.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1044] gi|326339891|gb|EGD63698.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. 1125] gi|330909697|gb|EGH38211.1| formamidopyrimidine-DNA glycosylase [Escherichia coli AA86] gi|331041948|gb|EGI14092.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M605] gi|331062537|gb|EGI34457.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA271] gi|331072898|gb|EGI44223.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H591] gi|332084445|gb|EGI89640.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 155-74] gi|332084815|gb|EGI89998.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 5216-82] gi|332089343|gb|EGI94447.1| formamidopyrimidine-DNA glycosylase [Shigella boydii 3594-74] gi|332345603|gb|AEE58937.1| formamidopyrimidine-DNA glycosylase [Escherichia coli UMNK88] gi|332749910|gb|EGJ80322.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-671] gi|332750592|gb|EGJ81000.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 4343-70] gi|332751169|gb|EGJ81572.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2747-71] gi|332764163|gb|EGJ94400.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri 2930-71] gi|332997786|gb|EGK17397.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-272] gi|333013320|gb|EGK32692.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-227] Length = 269 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|317050104|ref|YP_004117752.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] gi|316951721|gb|ADU71196.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. At-9b] Length = 269 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHMVGETILHAVVRNSRLRWPVSSEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL G II+HLGMSGS + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPGG-WIIIHLGMSGSLRMLPGE----LPPAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTNDLAGSSVLAHLGPEPLSDDFDGNYLFEKSRGKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q T L I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGIIPDRPAMSLSQAEAT------LLANTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QTDGKPGYFAQELQVYGRAGEPC-RACGTPIVSGKHGQRSTFWCPRCQ 268 >gi|227889521|ref|ZP_04007326.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] gi|227849999|gb|EEJ60085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii ATCC 33200] Length = 276 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIAKIIIWYPKIIVNDPDEFVKKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFNDGLTMVSHLRMEGKYHLVTPDQPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHP------LSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q+ VYG GE C NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQSMLQVYGHAGEECN-NCGTILEKIKVNGRGTTFCPHCQ 272 >gi|157149253|ref|YP_001456571.1| formamidopyrimidine-DNA glycosylase [Citrobacter koseri ATCC BAA-895] gi|166215620|sp|A8ARM2|FPG_CITK8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157086458|gb|ABV16136.1| hypothetical protein CKO_05093 [Citrobacter koseri ATCC BAA-895] Length = 269 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHANVRNGRLRWPVSEEIY-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGAYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQVE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVAAKHAQRATFYCRQCQK 269 >gi|256025635|ref|ZP_05439500.1| formamidopyrimidine-DNA glycosylase [Escherichia sp. 4_1_40B] gi|300948032|ref|ZP_07162172.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|300954471|ref|ZP_07166921.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|301028394|ref|ZP_07191640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|301644301|ref|ZP_07244303.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|307140333|ref|ZP_07499689.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H736] gi|312972080|ref|ZP_07786254.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|331644353|ref|ZP_08345482.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331655267|ref|ZP_08356266.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] gi|299878505|gb|EFI86716.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 196-1] gi|300318550|gb|EFJ68334.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 175-1] gi|300452403|gb|EFK16023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 116-1] gi|301077339|gb|EFK92145.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 146-1] gi|310334457|gb|EFQ00662.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1827-70] gi|315618662|gb|EFU99248.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 3431] gi|323934820|gb|EGB31202.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E1520] gi|323939606|gb|EGB35812.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E482] gi|331036647|gb|EGI08873.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H736] gi|331047282|gb|EGI19360.1| DNA-formamidopyrimidine glycosylase [Escherichia coli M718] Length = 269 Score = 321 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + + N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMNNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|225023717|ref|ZP_03712909.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] gi|224943599|gb|EEG24808.1| hypothetical protein EIKCOROL_00581 [Eikenella corrodens ATCC 23834] Length = 273 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + M+ TV ++ + + LR+ + I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYMQGKTVAEVVVRQPKLRWPVSPDLAQQLASSHIVYIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E +++HLGMSGS + A P +H+H+ I + T + DPR Sbjct: 61 LFEFPHG-VMLLHLGMSGSLRVYPNDSAPP--PEKHDHIDIITVDQTVLR-----LRDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T Q+P L+ LGPEP F + YL + ++ S +K AL++ K+V G+ Sbjct: 113 RFGSVLWF-TGAAEQHPLLQHLGPEPLQEEFTSGYLKNALSRRKSAIKTALMDNKVVVGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + +L+ EI+ VL AI+ GGSSLRD+V Sbjct: 172 GNIYANEALFAAGILPTRRADRVSAEE------CRRLVVEIRNVLHCAIEVGGSSLRDFV 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H DG GYFQ + VYG+ GEPC +CG I R + RS+FYC CQ+ Sbjct: 226 HSDGQSGYFQQQYHVYGREGEPC-HHCGTPIARQIVGQRSSFYCPKCQR 273 >gi|114705026|ref|ZP_01437934.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] gi|114539811|gb|EAU42931.1| formamidopyrimidine-DNA glycosylase [Fulvimarina pelagi HTCC2506] Length = 297 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 140/298 (46%), Positives = 186/298 (62%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TVT + L R +LRF P+ F+ G I +SRRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVTKLHLARPDLRFPLPYRFAERIEGAVIASLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + E L++ +HLGMSGSF IE A ++ H+HV L + + Sbjct: 61 IAETTEGLTLAMHLGMSGSFRIETKGEAIVPGTFVHPRSEDRLHDHVRFDLKRDDGSTPS 120 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V++NDPRRFG+M L+E + +P LR+LG EP N L F +++ LK ALL Sbjct: 121 -VVFNDPRRFGYMTLIEPGQMHAHPHLRSLGLEPTGNGLTGEALAPLFADRSTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWRA+LSP R S+++ +G P L L I+ + DAI+AG Sbjct: 180 DQKAIAGLGNIYVCEALWRARLSPRRLAGSIVRKDGRPTARLDDLADRIRDTIADAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG +GYFQ++F VYG+ EPCL C I+RIVQ+GRSTF+C CQ+ Sbjct: 240 GSTLRDYRKADGELGYFQHSFRVYGREHEPCLREACRGTIKRIVQSGRSTFFCPECQR 297 >gi|218702401|ref|YP_002410030.1| formamidopyrimidine-DNA glycosylase [Escherichia coli IAI39] gi|226706480|sp|B7NPE1|FPG_ECO7I RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218372387|emb|CAR20261.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 269 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|322835039|ref|YP_004215066.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] gi|321170240|gb|ADW75939.1| formamidopyrimidine-DNA glycosylase [Rahnella sp. Y9602] Length = 269 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + + + Y DPR Sbjct: 60 LVELRTG-WIIIHLGMSGSLRV----LPEETEAGKHDHVDLVMDTGHVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S L LGPEP FNA YL + K S +K L++ K+V G+ Sbjct: 110 RFGA--WLWSSDLAASNVLAHLGPEPLSEDFNADYLFEKSRTKKSPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R SL ++ L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFVAGISPDRPAHSLKRDET------ELLVRTIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+TGEPC CG I A R+TF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRTGEPC-RACGTPIESKKHAQRTTFFCPRCQR 269 >gi|293463959|ref|ZP_06664373.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|291321591|gb|EFE61027.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B088] gi|323189457|gb|EFZ74738.1| formamidopyrimidine-DNA glycosylase [Escherichia coli RN587/1] Length = 269 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVVTKHAQRATFYCRQCQK 269 >gi|283787732|ref|YP_003367597.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] gi|282951186|emb|CBG90879.1| formamidopyrimidine-DNA glycosylase [Citrobacter rodentium ICC168] Length = 269 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGAKILHAHVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGDYLLQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSQAD------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIIATKHAQRATFYCRRCQK 269 >gi|260461958|ref|ZP_05810203.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] gi|259032205|gb|EEW33471.1| formamidopyrimidine-DNA glycosylase [Mesorhizobium opportunistum WSM2075] Length = 301 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 134/302 (44%), Positives = 182/302 (60%), Gaps = 16/302 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF FP FS G+ I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGARLVRVETRRPDLRFPFPERFSERLTGRTITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-------------QHNHVTISLTNNT 107 + ++ +I HLGMSGSF IE + + N H+HV + + Sbjct: 61 TMHVQDGPVLICHLGMSGSFRIEADADNETDDNGTLGVFHHERPKSAAHDHVVFHVASAA 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + RVI+NDPRRFGFM L +P L LG EP N+ + + L + S L Sbjct: 121 G-ARSRVIFNDPRRFGFM-LFAEGSPETHPMLAGLGVEPTGNALDGVLLASLLKGRRSPL 178 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q+++AG+GNIYV EALWRA LSP+R+T ++ + ++ +L + I+ V+ D Sbjct: 179 KAALLDQRLIAGLGNIYVSEALWRAGLSPLRETGTIARPGKKAREQSERLAEAIRSVISD 238 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTY 286 AI AGGSSLRDY+H DGS+GYFQ++F+VY + GEPC CG + R+VQ+GRSTFYC Sbjct: 239 AIAAGGSSLRDYMHADGSLGYFQHSFAVYDREGEPCAKPGCGGHVERVVQSGRSTFYCRT 298 Query: 287 CQ 288 CQ Sbjct: 299 CQ 300 >gi|239833244|ref|ZP_04681573.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] gi|239825511|gb|EEQ97079.1| formamidopyrimidine-DNA glycosylase [Ochrobactrum intermedium LMG 3301] Length = 293 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 136/298 (45%), Positives = 182/298 (61%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ TV+ + R +LRF FP F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVMEGATVSQVEQRRPDLRFPFPDRFAQRLSGRRISALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 I L+ LS+I HLGMSGSF IE K H+HV L Sbjct: 61 TIHLDDGLSVISHLGMSGSFRIETDEGGDTPGQFHHERSKLSAHDHVVFHLQRADG-GSA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFM E +P L LG EP N + L+ F + + LK ALL Sbjct: 120 RVVYNDPRRFGFMLFAEEGTLDSHPLLAGLGIEPTGNLLSGAVLSELFSGRKAPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AG+GNIYVCEALWR+ LSP+R S+ Q+ + + +L +I+ V+ +AI AG Sbjct: 180 DQRLIAGLGNIYVCEALWRSHLSPMRAAGSVAQD----PETMERLASDIRTVIAEAIAAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+L+DY+ DG++GYFQ++FSVYG+ GEPC C + R VQ+GRSTF+C CQ+ Sbjct: 236 GSTLKDYIQADGALGYFQHSFSVYGREGEPCRNPACKGFVERAVQSGRSTFFCASCQQ 293 >gi|222147314|ref|YP_002548271.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] gi|254789428|sp|B9JZF5|FPG_AGRVS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221734304|gb|ACM35267.1| formamidopyrimidine-DNA glycosylase [Agrobacterium vitis S4] Length = 297 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 143/298 (47%), Positives = 192/298 (64%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ +T + L R +LRF P F+A T+G+ I+ +SRRAKYL Sbjct: 1 MPELPEVETVKRGLAPSMEGRRLTRLELRRTDLRFPLPVDFAARTQGRLIVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 LI+L+ +SI+ HLGMSGS+ IE + ++ +H+HV L+ Sbjct: 61 LIDLDDGVSIVSHLGMSGSYRIEAANETGLPGQFHMARSRDEKHDHVIFHLS-GPEGDPL 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE ++ LGPEP N+ +A YL +F K LK ALL Sbjct: 120 RVIYNDPRRFGFMDMVERRHMDRHAAFAGLGPEPVGNALDADYLAFRFKGKAQPLKTALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK++AG+GNIYVCEALWRA LSP R+L+ G P L L Q I+ V+ +AI+AG Sbjct: 180 DQKVIAGLGNIYVCEALWRAHLSPETPARALVNAEGKPVAALEDLTQAIRTVIAEAIEAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD++ DGS+GYFQ++F+VY + GE C C + R+ QAGRSTF+C CQ+ Sbjct: 240 GSSLRDHIQADGSLGYFQHSFNVYDREGEACRTPGCTGTVERMTQAGRSTFHCPQCQR 297 >gi|110643876|ref|YP_671606.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] gi|122957892|sp|Q0TBH4|FPG_ECOL5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110345468|gb|ABG71705.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 536] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVEAIRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|295095221|emb|CBK84311.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHA-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LTEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP +FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSAQE------CELLVRVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RACGTPIIATKHAQRATFYCRQCQK 269 >gi|163803273|ref|ZP_02197152.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] gi|159172910|gb|EDP57748.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. AND4] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I+++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGETIKAFVFRTPKLRWDIPQELKK-LEGQVILNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLSNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGA--WLWSAPNESHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++ + PIR L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKTHIHPIRPAGKLTMKE------WRLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG +I + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELQVYGKEGEQC-PECGTIIESVKIGQRNTFFCPQCQQ 269 >gi|331659955|ref|ZP_08360893.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] gi|222035343|emb|CAP78088.1| Formamidopyrimidine-DNA glycosylase [Escherichia coli LF82] gi|312948196|gb|ADR29023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O83:H1 str. NRG 857C] gi|315297030|gb|EFU56310.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 16-3] gi|331053170|gb|EGI25203.1| DNA-formamidopyrimidine glycosylase [Escherichia coli TA206] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLAGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|118590464|ref|ZP_01547866.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] gi|118436927|gb|EAV43566.1| formamidopyrimidine-DNA glycosylase [Stappia aggregata IAM 12614] Length = 305 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 130/297 (43%), Positives = 180/297 (60%), Gaps = 10/297 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + +T + +R +LRF FP F+ G+++ +SRR+KYL Sbjct: 9 MPELPEVETVKRGLAPTFEGALITKVDQNRPDLRFPFPDGFADRLTGRRLTVLSRRSKYL 68 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L +++ +++HLGMSGSF IE+ KNP+H+HV L + + Sbjct: 69 LGDIDSGDVLVMHLGMSGSFRIENDLAGATPGSFVHARSKNPKHDHVVFHLESADGARA- 127 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R++YNDPRRFGFMDL+ ++P R LG EP N L F+ + + LK ALL Sbjct: 128 RIVYNDPRRFGFMDLIARPALAEHPFFRDLGLEPLGNDLGGETLARLFNGRKTPLKAALL 187 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQK++AG+GNIYVCEALWR LSP R +L+ G P +L I+ L DAI AG Sbjct: 188 NQKLIAGLGNIYVCEALWRTGLSPERAAGTLVTRTGRPTKKAEELAANIRATLEDAIRAG 247 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ DG++GYFQ++F+VY + GE C C + R+VQ+ RSTF+C CQ Sbjct: 248 GSSLRDHTQADGTLGYFQHSFAVYDREGETCRTPGCTGTVARLVQSNRSTFHCPACQ 304 >gi|323965901|gb|EGB61349.1| formamidopyrimidine-DNA glycosylase [Escherichia coli M863] gi|327250761|gb|EGE62463.1| formamidopyrimidine-DNA glycosylase [Escherichia coli STEC_7v] Length = 269 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-CLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|333012914|gb|EGK32291.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri K-304] Length = 269 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKQVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|323975145|gb|EGB70250.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TW10509] Length = 269 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LSEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIMATKHAQRATFYCRQCQK 269 >gi|16131506|ref|NP_418092.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89110376|ref|AP_004156.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. W3110] gi|157163116|ref|YP_001460434.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|170083143|ref|YP_001732463.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194435950|ref|ZP_03068053.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238902726|ref|YP_002928522.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|253771524|ref|YP_003034355.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163563|ref|YP_003046671.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|256021361|ref|ZP_05435226.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|300923419|ref|ZP_07139460.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300927935|ref|ZP_07143494.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|301325317|ref|ZP_07218824.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|332282595|ref|ZP_08395008.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] gi|120475|sp|P05523|FPG_ECOLI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988460|sp|A8A697|FPG_ECOHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229541070|sp|B1X969|FPG_ECODH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|259647332|sp|C4ZXM7|FPG_ECOBW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41481|emb|CAA29431.1| unnamed protein product [Escherichia coli] gi|466773|gb|AAB18612.1| formamidopyrimidine-DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|1790066|gb|AAC76659.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|85676407|dbj|BAE77657.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K12 substr. W3110] gi|157068796|gb|ABV08051.1| formamidopyrimidine-DNA glycosylase [Escherichia coli HS] gi|169890978|gb|ACB04685.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|194425493|gb|EDX41477.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 101-1] gi|238861125|gb|ACR63123.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|242379159|emb|CAQ33961.1| formamidopyrimidine DNA glycosylase [Escherichia coli BL21(DE3)] gi|253322568|gb|ACT27170.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975464|gb|ACT41135.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B str. REL606] gi|253979620|gb|ACT45290.1| formamidopyrimidine-DNA glycosylase [Escherichia coli BL21(DE3)] gi|260447346|gb|ACX37768.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|300420329|gb|EFK03640.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 182-1] gi|300464027|gb|EFK27520.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 187-1] gi|300847844|gb|EFK75604.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 78-1] gi|315138217|dbj|BAJ45376.1| formamidopyrimidine-DNA glycosylase [Escherichia coli DH1] gi|323959883|gb|EGB55531.1| formamidopyrimidine-DNA glycosylase [Escherichia coli H489] gi|323971277|gb|EGB66522.1| formamidopyrimidine-DNA glycosylase [Escherichia coli TA007] gi|332104947|gb|EGJ08293.1| formamidopyrimidine-DNA glycosylase [Shigella sp. D9] Length = 269 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|329667766|gb|AEB93714.1| formamidopyrimidine-DNA glycosylase [Lactobacillus johnsonii DPC 6026] Length = 276 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE ++R L ++K T+ I + + + P F KKI+ + R KYL Sbjct: 1 MPEMPEVETVKRTLTPLVKGKTIAKIIIWYPKIIVNNPDEFVEKLTNKKILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y D R Sbjct: 61 LFRFSDDLTMVSHLRMEGKYHLVTPDHPK----GKHEHVEFVFTDGT-----ALRYADVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q +R LGPEP F+ Y + +K N+KN LL+Q +V G+ Sbjct: 112 KFGRMHLVETGTEKQTTGIRHLGPEPNTEEFSVEYFINALSRKKKNIKNTLLDQTVVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHP------LSSAKSIPADKIVDLYHNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +QN VYG GE C NCG ++ +I GR T +C +CQ Sbjct: 226 DANGDIGGYQNMLQVYGHAGEECN-NCGTILEKIKVNGRGTTFCPHCQ 272 >gi|300361189|ref|ZP_07057366.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] gi|300353808|gb|EFJ69679.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri JV-V03] Length = 276 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFIKKLTNKTILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G+L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNGDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y + +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLTYFINALSRKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHP------LSSAQAIPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S CG ++ +I GR T +C +CQ Sbjct: 226 DANGQIGGYQKMLQVYGHAGEEC-SKCGTILEKIKVNGRGTTFCPHCQ 272 >gi|332996140|gb|EGK15767.1| formamidopyrimidine-DNA glycosylase [Shigella flexneri VA-6] Length = 269 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPNLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|26250281|ref|NP_756321.1| formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227883803|ref|ZP_04001608.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300984965|ref|ZP_07177217.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|301018964|ref|ZP_07183187.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|29611716|sp|Q8FC87|FPG_ECOL6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|26110711|gb|AAN82895.1|AE016769_10 Formamidopyrimidine-DNA glycosylase [Escherichia coli CFT073] gi|227839081|gb|EEJ49547.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 83972] gi|300399458|gb|EFJ82996.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 69-1] gi|300408245|gb|EFJ91783.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 45-1] gi|307555734|gb|ADN48509.1| formamidopyrimidine DNA glycosylase [Escherichia coli ABU 83972] gi|315292972|gb|EFU52324.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 153-1] Length = 269 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|78486260|ref|YP_392185.1| formamidopyrimidine-DNA glycosylase [Thiomicrospira crunogena XCL-2] gi|123555019|sp|Q31EB2|FPG_THICR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78364546|gb|ABB42511.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Thiomicrospira crunogena XCL-2] Length = 280 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + ++ + I + LR+ G ++ + RRAKYL Sbjct: 1 MPELPEVETTRKGIQPKVEGQAIQKIIIRNGKLRWPVDPSLVEKLPGLVVLSIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +I+HLGMSG+ + + +H+H+ + L N + + Y+DPR Sbjct: 61 LLETDQG-HLIIHLGMSGNLRV----LPQHEPAVKHDHIDLLLENG-----FLLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + ++ L++LGPEP ++FNA YL + + + +K ++N +IV G+ Sbjct: 111 RFG-SWLWTEAPIQEHSLLKSLGPEPLTDAFNAEYLFQKLQGRKTAIKTFIMNNQIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P R +SL T KL I+ VL AI+ GG++L+D++ Sbjct: 170 GNIYANESLFLSGIHPTRPAQSLTLTEAT------KLTAHIKTVLSAAIEQGGTTLKDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ +VYG+ PC C I ++V R+ ++C+ CQK Sbjct: 224 TPDGKPGYFEQKLNVYGRENLPC-PQCDSAIEKVVLNQRAAYFCSNCQK 271 >gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] Length = 269 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|304399014|ref|ZP_07380883.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] gi|304353474|gb|EFM17852.1| formamidopyrimidine-DNA glycosylase [Pantoea sp. aB] Length = 269 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPHG-WIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S L LGPEP F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSSDLAGSSVLAHLGPEPLSEQFDGAYLFDKSRGKRTLIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGIVPDRAAGSLSQAES------ELLVNTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPIVSGRHGQRSTYWCPNCQ 268 >gi|54307427|ref|YP_128447.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] gi|81697553|sp|Q6LVN0|FPG_PHOPR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46911847|emb|CAG18645.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium profundum SS9] Length = 269 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M TVT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMVGQTVTKIIVRNPKLRWPIPEEIQQ-IEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS I S I +H+HV + L++ + YNDPR Sbjct: 60 LLHTDVGYA-IVHLGMSGSLRILPAS----IPPEKHDHVDLVLSSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP N F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWGLPDLDHKVLSQLGPEPLSNDFTAEYLQERAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + + + + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEISP------EKIALFVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|298368684|ref|ZP_06980002.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] gi|298282687|gb|EFI24174.1| DNA-formamidopyrimidine glycosylase [Neisseria sp. oral taxon 014 str. F0314] Length = 275 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 160/289 (55%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + V+ + L + LR+ +G + + SRRAKYL Sbjct: 1 MPELPEVETTLRGVGPHITGKAVSGVILRQSKLRWPVNPDLPQILQGLLVEECSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + +++HLGMSGS + + K +H+H+ I ++ T + Y+DPR Sbjct: 61 IIRFQTG-VLLIHLGMSGSLRVFTMGDDRIGKPDKHDHIDIEFSDGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E +Y +P L LGPEP + F+A YL + +K L++ +V G+ Sbjct: 115 KFGAFLWFEGIAEY-HPLLAKLGPEPLSDEFDADYLYRKMKVLKRTVKLVLMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R L + T L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFKAGIVPHRPAYMLSRQECTT------LVETVKTVLKRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYFQ ++VYG+ G+PC+ CG+ I + V R TFYC++CQK Sbjct: 228 NSDGQSGYFQQEYAVYGRQGKPCVK-CGRPILKEVLGQRGTFYCSHCQK 275 >gi|82779125|ref|YP_405474.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae Sd197] gi|309784388|ref|ZP_07679027.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] gi|90101317|sp|Q329M2|FPG_SHIDS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81243273|gb|ABB63983.1| formamidopyrimidine DNA glycosylase [Shigella dysenteriae Sd197] gi|308927895|gb|EFP73363.1| formamidopyrimidine-DNA glycosylase [Shigella dysenteriae 1617] Length = 269 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRILTEG----LPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|193063825|ref|ZP_03044912.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194430623|ref|ZP_03063077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218697356|ref|YP_002405023.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 55989] gi|260846600|ref|YP_003224378.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|307314280|ref|ZP_07593888.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|254789437|sp|B7L758|FPG_ECO55 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|192930540|gb|EDV83147.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E22] gi|194411335|gb|EDX27703.1| formamidopyrimidine-DNA glycosylase [Escherichia coli B171] gi|218354088|emb|CAV00637.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|257761747|dbj|BAI33244.1| formamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|306906103|gb|EFN36622.1| formamidopyrimidine-DNA glycosylase [Escherichia coli W] gi|315062923|gb|ADT77250.1| formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323160757|gb|EFZ46693.1| formamidopyrimidine-DNA glycosylase [Escherichia coli E128010] gi|323182663|gb|EFZ68066.1| formamidopyrimidine-DNA glycosylase [Escherichia coli 1357] gi|323376484|gb|ADX48752.1| formamidopyrimidine-DNA glycosylase [Escherichia coli KO11] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVELVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|170766560|ref|ZP_02901013.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] gi|170123998|gb|EDS92929.1| formamidopyrimidine-DNA glycosylase [Escherichia albertii TW07627] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RSSNQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEERPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRALEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L++ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLVRMIKTVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|291619454|ref|YP_003522196.1| MutM [Pantoea ananatis LMG 20103] gi|291154484|gb|ADD79068.1| MutM [Pantoea ananatis LMG 20103] gi|327395777|dbj|BAK13199.1| formamidopyrimidine-DNA glycosylase MutM [Pantoea ananatis AJ13355] Length = 275 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 7 MPELPEVETSRRGIEPHLVGQTILHAVVRNARLRWPVSQEILA-LSDQPVLSVQRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 66 LLELPHG-WIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S L LGPEP +F+ YL + K + +K L++ KIV G+ Sbjct: 116 RFGA--WLWSSDLAGSSVLAHLGPEPLSEAFSGDYLFEKSRGKRTVIKQWLMDNKIVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++LRD++ Sbjct: 174 GNIYASESLFTAGIIPDRPAMSLSHEDAAI------LANTIKAVLLRSIEQGGTTLRDFL 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 228 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIVSGKHGQRSTYWCPNCQ 274 >gi|262273493|ref|ZP_06051307.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] gi|262222471|gb|EEY73782.1| formamidopyrimidine-DNA glycosylase [Grimontia hollisae CIP 101886] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + K+ VT + + + LR+ P G+ I V RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHAKDQVVTKLEVRQPKLRWPVPDTLFN-IEGQTIRAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++E + +++ HLGMSGS + + +H+HV + L+N + YNDPR Sbjct: 60 ILETDIGYALV-HLGMSGSLRV----LPEATPAGKHDHVDLHLSNGKV-----IRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L LGPEP + F YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWQEKG--DDHPVLEKLGPEPLTDDFTGDYLLEKAKGKRTAIKPFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +K+ P R L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSKIHPTRSAGQLTHEEAQT------LVAEIKAVLAMAIRQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+PC CG+++ + R+T +C CQK Sbjct: 222 QADGKPGYFAQELRVYGKQGKPC-PVCGEVLESVKIGQRNTVFCPACQK 269 >gi|212712569|ref|ZP_03320697.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] gi|212684785|gb|EEB44313.1| hypothetical protein PROVALCAL_03664 [Providencia alcalifaciens DSM 30120] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTISYAIVRNERLRWPVSEQI-KRLSDETVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELRKG-WIIVHLGMSGSVRI----LTEELPEEKHDHVDLILGDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP + FN YL K+ +K L++ K+V G+ Sbjct: 110 RFGAWLWCED--LASSSVLAHLGPEPLSDEFNPQYLFDLAAKRKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +K+SP + T +L + T +L+ +I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFASKISPEKLTNTLTLHEIT------ELVTQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC S CG I I Q R+TFYC CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPC-SLCGTPIESIKQGQRTTFYCPQCQ 268 >gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] gi|238066645|sp|B5XTG8|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGVTILHAIVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP + FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKTLEDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|261346782|ref|ZP_05974426.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] gi|282565180|gb|EFB70715.1| DNA-formamidopyrimidine glycosylase [Providencia rustigianii DSM 4541] Length = 269 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 113/289 (39%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + +K++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNTIAYTIVRNSRLRWPVSEQI-KSLADEKVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + L + + Y DPR Sbjct: 60 LIELNKG-WIIVHLGMSGSVRI----LTEELPEEKHDHVDLILGDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP + FN YL K+ +K L++ K+V G+ Sbjct: 110 RFGAWLWCED--LDTSSVLAHLGPEPLSDEFNPQYLFDLAKKRKVAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +K+SP + L + T +L+++I+KVL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFASKISPEKMVNQLTLADIT------ELVKQIKKVLQRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC S CG I I Q R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELFVYGKKGEPC-SMCGTHIESIKQGQRTTFYCPQCQK 269 >gi|194445857|ref|YP_002042976.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693550|sp|B4SXD7|FPG_SALNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194404520|gb|ACF64742.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 269 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L Q I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAE------CDLLAQVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|59801038|ref|YP_207750.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|239999153|ref|ZP_04719077.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|240013939|ref|ZP_04720852.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI18] gi|240080500|ref|ZP_04725043.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|240113132|ref|ZP_04727622.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|240115888|ref|ZP_04729950.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|240118186|ref|ZP_04732248.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|240121508|ref|ZP_04734470.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID24-1] gi|240123734|ref|ZP_04736690.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|240125925|ref|ZP_04738811.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|240128437|ref|ZP_04741098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|254493927|ref|ZP_05107098.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|260440297|ref|ZP_05794113.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|268594986|ref|ZP_06129153.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268596634|ref|ZP_06130801.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268599214|ref|ZP_06133381.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268601561|ref|ZP_06135728.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268603900|ref|ZP_06138067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268682363|ref|ZP_06149225.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268684521|ref|ZP_06151383.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268686831|ref|ZP_06153693.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] gi|75507393|sp|Q5F8Z9|FPG_NEIG1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59717933|gb|AAW89338.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA 1090] gi|226512967|gb|EEH62312.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 1291] gi|268548375|gb|EEZ43793.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae 35/02] gi|268550422|gb|EEZ45441.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA19] gi|268583345|gb|EEZ48021.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae MS11] gi|268585692|gb|EEZ50368.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID18] gi|268588031|gb|EEZ52707.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID1] gi|268622647|gb|EEZ55047.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae PID332] gi|268624805|gb|EEZ57205.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-92-679] gi|268627115|gb|EEZ59515.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae SK-93-1035] Length = 275 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CAVLVETVKAVLQRAIETGGSTLRDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|331685298|ref|ZP_08385884.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] gi|331077669|gb|EGI48881.1| DNA-formamidopyrimidine glycosylase [Escherichia coli H299] Length = 269 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGESC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|83944872|ref|ZP_00957238.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] gi|83851654|gb|EAP89509.1| formamidopyrimidine-DNA glycosylase [Oceanicaulis alexandrii HTCC2633] Length = 286 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 127/297 (42%), Positives = 172/297 (57%), Gaps = 19/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ M+ + R +LRF FP F+ G + + RR+KYL Sbjct: 1 MPELPEVETVRRGLIPAMEGRRILRAEARRPDLRFPFPDRFAERLTGTVVERLDRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN--------PQHNHVTISLTNNTNTKKY 112 L L ++++HLGMSG F + ++ + P H+HV + Sbjct: 61 LARLGSGETLLMHLGMSGRFSVTAEDISRQPGDFVYAAPANPAHDHVVFQMEGGVT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V YNDPRRFGFM L ET + P LR LGPEP N F+ L F + S +K LL Sbjct: 117 -VTYNDPRRFGFMTLFETDAEAAQPYLRDLGPEPLSNGFSEDLLNTAFKGRRSPIKAGLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +VAG+GNIYVCEALWRA++SP R +S+ P +L ++ V+ +AI+AG Sbjct: 176 DQHVVAGLGNIYVCEALWRAQISPRRLCQSI------PGARAARLAPAVRSVISEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ+ F VYG+ GEPC + RIVQ+GRSTF+C CQ+ Sbjct: 230 GSTLRDYAGADGAMGYFQHRFDVYGREGEPCHRCEDSRVERIVQSGRSTFFCPSCQR 286 >gi|261250531|ref|ZP_05943106.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] gi|260939100|gb|EEX95087.1| formamidopyrimidine-DNA glycosylase [Vibrio orientalis CIP 102891] Length = 268 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 152/289 (52%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGETVAKLTFRTPKLRWDIPQEL-KQMEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + A +H+HV + LTN + YNDPR Sbjct: 60 LIETDVGCA-IVHLGMSGSLRVLDAEIA----PAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L +GPEP + FNA Y+ + K +K +++ K+V GI Sbjct: 110 RFGAWLWTEDG---NHTALGIMGPEPLTDEFNADYIAEKAKGKRVAVKQFIMDNKVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R + + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKITKKEWV------LLVSEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC +CG+ I R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKAGEPC-PSCGEPISEQKIGQRNTFFCGECQK 268 >gi|308188653|ref|YP_003932784.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] gi|308059163|gb|ADO11335.1| formamidopyrimidine DNA glycosylase [Pantoea vagans C9-1] Length = 269 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPHG-WIIIHLGMSGSLRV----LSEELPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSSDLTGSSVLAHLGPEPLSDQFDGTYLFDKSRGKRTLIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRAAGSLSQAEA------ELLVNTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RST++C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPIISGRHGQRSTYWCPNCQ 268 >gi|167549026|ref|ZP_02342785.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325559|gb|EDZ13398.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 269 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|323495234|ref|ZP_08100316.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] gi|323310494|gb|EGA63676.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio brasiliensis LMG 20546] Length = 268 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 111/288 (38%), Positives = 151/288 (52%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV I LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLVGETVAKITFRTPKLRWDIPAEL-KQMEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + A +H+HV + LTN + YNDPR Sbjct: 60 LIETDIGSA-IVHLGMSGSLRVLDAEIA----PAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L T+GPEP + FN Y+T + K +K +++ K+V G+ Sbjct: 110 RFGAWLWTEDG---THAALGTMGPEPLTDEFNPDYITEKAKGKRVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R L L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRPAGKLTHKE------WALLVDEIKQVLTTAIKQGGTTLKDFS 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC NCG+ + R+TF+C CQ Sbjct: 221 QADGKPGYFAQELLVYGKAGEPC-PNCGEPLEEQKIGQRNTFFCAECQ 267 >gi|168464966|ref|ZP_02698858.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632352|gb|EDX50836.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 269 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPTEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|200388222|ref|ZP_03214834.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605320|gb|EDZ03865.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 269 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTAEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|16762583|ref|NP_458200.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144072|ref|NP_807414.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415616|ref|YP_152691.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|168235331|ref|ZP_02660389.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168818444|ref|ZP_02830444.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194734471|ref|YP_002116661.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197263131|ref|ZP_03163205.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364543|ref|YP_002144180.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|204928552|ref|ZP_03219751.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354672|ref|YP_002228473.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858963|ref|YP_002245614.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161284|ref|ZP_03346994.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425232|ref|ZP_03357982.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213615651|ref|ZP_03371477.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289824124|ref|ZP_06543721.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362542|sp|Q8Z2H2|FPG_SALTI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81677677|sp|Q5PC09|FPG_SALPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689781|sp|B4TZX7|FPG_SALSV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690465|sp|B5R5F9|FPG_SALEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690539|sp|B5RGF2|FPG_SALG2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690753|sp|B5BI09|FPG_SALPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|25289586|pir||AG0971 formamidopyrimidine-DNA glycosylase STY4068 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504888|emb|CAD03267.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi] gi|29139709|gb|AAO71274.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129873|gb|AAV79379.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194709973|gb|ACF89194.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197096020|emb|CAR61607.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197241386|gb|EDY24006.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291486|gb|EDY30838.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204321985|gb|EDZ07183.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205274453|emb|CAR39485.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205344433|gb|EDZ31197.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206710766|emb|CAR35127.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088146|emb|CBY97908.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326625471|gb|EGE31816.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 269 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|295693392|ref|YP_003602002.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] gi|295031498|emb|CBL50977.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus ST1] Length = 275 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHEKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K +H+HV T++T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTSDAPKD----KHDHVEFIFTDHT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPAKKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens LL3] Length = 278 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 114/290 (39%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 64 LLFHLDH-YVMVSHLRMEGKYGLHQADEP----DDKHVHVVFNMTDGTQLR-----YRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFAPGEELTALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K SL + KL EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGIHPETKANSLSDGQ------IKKLHTEIKDTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 228 INSQGEIGMFQLRHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 276 >gi|89069834|ref|ZP_01157169.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] gi|89044635|gb|EAR50751.1| formamidopyrimidine-DNA glycosylase [Oceanicola granulosus HTCC2516] Length = 283 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 179/294 (60%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ ++R +LR+ FP + G++++ + RR+KYL Sbjct: 1 MPELPEVETVRRGLAPAMEGATIARAEVNRPDLRWPFPERLAERLTGRRVLRLGRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L+ELEG+ ++IVHLGMSG ++ + + +H+HV + + + RV + Sbjct: 61 LVELEGDETLIVHLGMSGRMVVSGDPLGQFHQEHAAAEKHDHVVLHMASGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL T + L LGPEP NSF+ YL + + + +K+ALL+Q+I Sbjct: 116 NDPRRFGAMDLWPTETLENHWLLAELGPEPLGNSFDETYLVARLRGRATPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL RA + P RK + L L+ ++ VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVCEALHRAGIHPRRKAGRIAPAR------LAGLVPVVRAVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G PC C + RIVQ+GRS+FYC CQ+ Sbjct: 230 RDYRQADGELGYFQHTFEVYDREGHPCAKPGCAGTVARIVQSGRSSFYCPVCQR 283 >gi|326629811|gb|EGE36154.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 287 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 19 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 77 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 78 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 128 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 185 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 186 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 239 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 240 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 287 >gi|256843649|ref|ZP_05549137.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|293381756|ref|ZP_06627733.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] gi|256615069|gb|EEU20270.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 125-2-CHN] gi|290921676|gb|EFD98701.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus 214-1] Length = 275 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIEKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKD----KHDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|16767011|ref|NP_462626.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994347|ref|ZP_02575439.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241905|ref|ZP_02666837.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260520|ref|ZP_02682493.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194451470|ref|YP_002047758.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|6016042|sp|O54326|FPG_SALTY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238690227|sp|B4T9C0|FPG_SALHS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2842793|gb|AAC01773.1| MutMST [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422294|gb|AAL22585.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194409774|gb|ACF69993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205327810|gb|EDZ14574.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338984|gb|EDZ25748.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350455|gb|EDZ37086.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248874|emb|CBG26728.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995987|gb|ACY90872.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160263|emb|CBW19786.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914752|dbj|BAJ38726.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226779|gb|EFX51829.1| Formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132086|gb|ADX19516.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990575|gb|AEF09558.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 269 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|312984113|ref|ZP_07791460.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] gi|310894467|gb|EFQ43542.1| DNA-formamidopyrimidine glycosylase [Lactobacillus crispatus CTV-05] Length = 275 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKD----KHDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPAEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|271498731|ref|YP_003331756.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] gi|270342286|gb|ACZ75051.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech586] Length = 269 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGRTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LLELPTG-WIIIHLGMSGSLRV----LPEYSEPDKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL + H + + +K +++ K+V G+ Sbjct: 110 RFGA--WLWCDDLANSSVLAHLGPEPLSDDFSGDYLFSRCHGRKTPIKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q ++L+Q I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGILPERPAGSLSQQEA------HQLVQSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC +CG +I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRNGKPC-HHCGTLIDSIKQGQRSTFFCKRCQR 269 >gi|48474241|sp|Q9X981|FPG_SERMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16445331|gb|AAD28805.2| Fpg [Serratia marcescens] Length = 271 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE IIVHLGMSGS + + +H+HV + + N + Y DPR Sbjct: 60 LIELERG-WIIVHLGMSGSLRMLREENED--EAGKHDHVDLVINNGMILR-----YTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +FN YL + K + +K L++ K+V G+ Sbjct: 112 RFGAWLWCED--LATSSVLAHLGPEPLSEAFNGDYLYEKSRNKRTLIKPWLMDNKLVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L + I+ VL +I+ GG++LRD++ Sbjct: 170 GNIYASESLFSAGILPDRPAGSLTKAEA------ALLAKTIKAVLQRSIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 224 QSDGKPGYFAQELQVYGRAGEPC-RTCGTPIESAKHGQRSTFFCRRCQR 271 >gi|116630047|ref|YP_815219.1| formamidopyrimidine-DNA glycosylase [Lactobacillus gasseri ATCC 33323] gi|238853765|ref|ZP_04644131.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282851274|ref|ZP_06260639.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] gi|122273016|sp|Q041U1|FPG_LACGA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116095629|gb|ABJ60781.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus gasseri ATCC 33323] gi|238833574|gb|EEQ25845.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 202-4] gi|282557242|gb|EFB62839.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri 224-1] Length = 276 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 146/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHP------LSSAKAIPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G IG +Q VYG GE C S CG ++ +I GR T +C +CQ Sbjct: 226 DANGEIGGYQKMLQVYGHAGEECSS-CGTILEKIKVNGRGTTFCPHCQ 272 >gi|322612892|gb|EFY09844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618957|gb|EFY15844.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625266|gb|EFY22093.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630067|gb|EFY26840.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634258|gb|EFY30993.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635841|gb|EFY32550.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643021|gb|EFY39598.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645051|gb|EFY41582.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649849|gb|EFY46272.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653056|gb|EFY49391.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661125|gb|EFY57353.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662386|gb|EFY58599.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667264|gb|EFY63430.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674359|gb|EFY70452.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678433|gb|EFY74494.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680939|gb|EFY76973.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687125|gb|EFY83098.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195849|gb|EFZ81021.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198234|gb|EFZ83340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200852|gb|EFZ85922.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206606|gb|EFZ91564.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210481|gb|EFZ95367.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216231|gb|EGA00959.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220454|gb|EGA04908.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225317|gb|EGA09551.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228431|gb|EGA12562.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234252|gb|EGA18340.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237237|gb|EGA21304.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244756|gb|EGA28760.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245869|gb|EGA29859.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250948|gb|EGA34824.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257304|gb|EGA41003.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262228|gb|EGA45789.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264561|gb|EGA48065.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268851|gb|EGA52309.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 269 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK +K L++ K+V G+ Sbjct: 110 RFGT--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKMAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|197333929|ref|YP_002154899.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] gi|238690292|sp|B5FFG1|FPG_VIBFM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197315419|gb|ACH64866.1| formamidopyrimidine-DNA glycosylase [Vibrio fischeri MJ11] Length = 273 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQK-LVGQRVQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+HLGMSGS + + + + +H+HV + L N + YNDPR Sbjct: 60 MIDTPEGSA-IIHLGMSGSLRVLD----EEVPSAKHDHVDLVLENGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G+ Sbjct: 110 KFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P SL + T L+ EI+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAQIHPKTPVGSLKASQITV------LVAEIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ G+ C C I R++F+C CQ Sbjct: 222 QVDGKPGYFAQELKVYGRAGKEC-PVCSSKIEEEKIGQRNSFWCGKCQ 268 >gi|227877045|ref|ZP_03995134.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256850115|ref|ZP_05555545.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|262047414|ref|ZP_06020371.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] gi|227863363|gb|EEJ70793.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus JV-V01] gi|256713087|gb|EEU28078.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus crispatus MV-1A-US] gi|260572388|gb|EEX28951.1| formamidopyrimidine-DNA glycosylase [Lactobacillus crispatus MV-3A-US] Length = 275 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + L + F GK+++ + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIVGKTIKKVVLWYPKIVATDHKKFIKELPGKRVLKIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKD----KHDHVEFIFTDQT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F++ Y +K N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNSIEFSSDYFIKALSRKKKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P + +L Q I + + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPSEKAKELWQNINQTIKIATKKRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G++G +Q VYG GEPC CG + +I +GR T +C +CQ Sbjct: 226 DANGNVGGYQEMLKVYGHAGEPCAK-CGTELEKIKVSGRGTTFCPHCQ 272 >gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-LLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|224585526|ref|YP_002639325.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254789450|sp|C0Q1W8|FPG_SALPC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|224470054|gb|ACN47884.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFP 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|161616806|ref|YP_001590771.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189044674|sp|A9MVN0|FPG_SALPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161366170|gb|ABX69938.1| hypothetical protein SPAB_04625 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QGDGKPGYFAQELQVYGRKGEPC-RVCGTPIAATKHAQRATFYCRHCQK 269 >gi|92116584|ref|YP_576313.1| formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] gi|91799478|gb|ABE61853.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrobacter hamburgensis X14] Length = 289 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 128/294 (43%), Positives = 178/294 (60%), Gaps = 10/294 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ +T + L R +LRF F F+A G++I+ + RRAK+L Sbjct: 1 MPELPEVETVRRGLQPVMEGARITRVELRRADLRFPFQPDFAARLTGQRIVGLGRRAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ----HNHVTISLTNNTNTKKYRVIY 116 + +L +++HLGMSGSF I ++HV + L++ + Y Sbjct: 61 MADLASGDVLMMHLGMSGSFRIGAVPVGAFHHPRNVERVNDHVVLRLSSGKI-----ITY 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM +V S P L+ LGPEP N+F+A L K ++LK ALLNQ + Sbjct: 116 NDPRRFGFMKIVARSALDDEPLLKGLGPEPLGNAFDAATLAKACAGKTASLKAALLNQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E L RA+LSP R+ +L ++G P D +L+ I+ VL +AI GG++L Sbjct: 176 VAGLGNIYAAETLHRARLSPKRRASTLASHSGAPTDRARQLVAAIRAVLTEAIAVGGATL 235 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 R+ H DG +GYFQ++F VY G+PC C ++RR VQ GR+TF+C CQK Sbjct: 236 RNCRHPDGKLGYFQHSFEVYNHEGQPCTTPGCDGVVRRFVQNGRATFWCPKCQK 289 >gi|321312442|ref|YP_004204729.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] gi|320018716|gb|ADV93702.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus subtilis BSn5] Length = 276 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 154/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYGLHQAEEP----DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|261823580|ref|YP_003261686.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] gi|261607593|gb|ACX90079.1| formamidopyrimidine-DNA glycosylase [Pectobacterium wasabiae WPP163] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTIFYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL G IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELTGG-WIIVHLGMSGSLRV----LPEYTEPEKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L LGPEP + F++ YL K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWTDNLETCSVLAHLGPEPLEAEFSSDYLYQASRNKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +++ T L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNESDATV------LVRVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRSGEPC-RTCGTPIETAKHGQRSTFFCRCCQK 269 >gi|294679048|ref|YP_003579663.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] gi|294477868|gb|ADE87256.1| formamidopyrimidine-DNA glycosylase [Rhodobacter capsulatus SB 1003] Length = 281 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ + ++R +LR+ P + G ++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLAPAMEGRVIDRAEVNRPDLRWPLPEAMAERLTGARVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----KPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +L S+++HLGMSG ++ +H+HV + + RV + Sbjct: 61 LADLSTGESLLIHLGMSGRMLVSGVMLGDFHLDHPAAQKHDHVVLHMEGGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDLV T + + L LGPEP N FN YL + S +K ALL+Q + Sbjct: 116 NDARRFGAMDLVRTDREAAHWLLAGLGPEPFGNDFNEAYLIDALKSRKSPIKTALLDQHV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E L+RA + P N L L+ I++VL +AI+AGGSSL Sbjct: 176 VAGLGNIYVSEVLFRAGIDPR------RAANRIAAARLAGLVPLIREVLAEAIEAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ DG +GYFQ++F VY + +PC C I+RIVQ+GRS+++C CQK Sbjct: 230 RDHRQADGELGYFQHSFRVYDREDDPC-PACATPIKRIVQSGRSSYFCPACQK 281 >gi|156972979|ref|YP_001443886.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi ATCC BAA-1116] gi|166198756|sp|A7MSN3|FPG_VIBHB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156524573|gb|ABU69659.1| hypothetical protein VIBHAR_00657 [Vibrio harveyi ATCC BAA-1116] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQKLKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAV--LGHMGPEPLTEEFNADYVAEKAKGKRVAIKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGVCQK 269 >gi|156936197|ref|YP_001440113.1| formamidopyrimidine-DNA glycosylase [Cronobacter sakazakii ATCC BAA-894] gi|166215624|sp|A7MQ97|FPG_ENTS8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156534451|gb|ABU79277.1| hypothetical protein ESA_04096 [Cronobacter sakazakii ATCC BAA-894] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHA-LSDKPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP ++FN YL + KK +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRELEGHNVLAHLGPEPLSDAFNGAYLREKCAKKKVAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|197249599|ref|YP_002148658.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238910239|ref|ZP_04654076.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|238689996|sp|B5EXE0|FPG_SALA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197213302|gb|ACH50699.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 269 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae NTUH-K2044] gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] Length = 269 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPVVGTKHAQRATFYCRQCQK 269 >gi|138896290|ref|YP_001126743.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermodenitrificans NG80-2] gi|196249911|ref|ZP_03148606.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] gi|134267803|gb|ABO67998.1| Formamidopyrimidine-DNA glycosidase [Geobacillus thermodenitrificans NG80-2] gi|196210425|gb|EDY05189.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. G11MC16] Length = 274 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ TV D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTVGDVQIFWPNIIRHPQDPEAFAARLVGQTVRGIDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + ++ ++ HL M G + + H HV T+++ + Y D Sbjct: 61 FLKFLFDQDM-LVSHLRMEGRYTVADAHEPLD----PHTHVVFRFTDDSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEGDRQPPLDQLGPEPLSPAFSPAVLAERAAKTKRTVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +++ + +AI GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPERQAASLTDEE------IKRLHEQMVATIGEAIMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC +CQ+ Sbjct: 225 YVNTQGETGTFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPHCQR 274 >gi|227510536|ref|ZP_03940585.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190188|gb|EEI70255.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 280 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIEKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E +H H+ LT+ + YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTP----LSKHTHIVFHLTDGRQLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVAE------LKLLRKSIIDEIKKAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|307821985|ref|ZP_07652217.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] gi|307736551|gb|EFO07396.1| formamidopyrimidine-DNA glycosylase [Methylobacter tundripaludum SV96] Length = 271 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + + LR+ P S G I VSRRAKYL Sbjct: 1 MPELPEVETTCRGIAPHIEGQIIKQVIIRQPKLRWPVPETLSQTLTGLSIQSVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ HLGMSGS I T +H+H+ + T + +NDPR Sbjct: 61 LFSTTSGTVLL-HLGMSGSLRIMSTDQT----VGKHDHIDFIFNDGTILR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T ++ L+ LGPEP FN L + +K+ +++ IV G+ Sbjct: 111 RFGAV-LWTTEPAAEHQLLKNLGPEPLLPDFNGELLYSLSRNRTIAVKSFIMDSHIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + KL + I+ VL AI GG++LRD+V Sbjct: 170 GNIYANEALFMAGIQPTRQAGKVSLAR------YQKLAECIRVVLQQAIQQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ VYG+ G PC+ C Q + I A RST +C CQ+ Sbjct: 224 NEVGKPGYFQQQLKVYGRAGLPCV-GCNQPLTEIRIANRSTVFCPNCQR 271 >gi|53802792|ref|YP_115459.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] gi|81680673|sp|Q602J1|FPG_METCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53756553|gb|AAU90844.1| formamidopyrimidine-DNA glycosylase [Methylococcus capsulatus str. Bath] Length = 271 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + D+ + LR+ P G+++ DV RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIAGWRIVDVRVREARLRWPVPADLGETLTGRRLTDVRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++I HLGMSGS I +H+HV + + Y+DPR Sbjct: 61 LLDFDEG-TLIAHLGMSGSLRICKPG----FPPRKHDHVDLVFE-----GDICLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L ++P L LGPEP D +F+ +L +N+ +K+ +++ ++VAG+ Sbjct: 111 RFG-CLLWTAEPPERHPLLAALGPEPLDKAFDGAHLHRLAAGRNTAVKSFIMDSRVVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R + L + I +VL +I+ GG++LRD+V Sbjct: 170 GNIYANEALFRAGIHPARPAGKISLAR------YRNLGEHIAEVLAASIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ GYF+ VY + G+PC CG+ IR + R+T+YC CQ+ Sbjct: 224 NESGAPGYFKQVLRVYDRAGQPC-RVCGEPIRCVRLGQRATYYCPRCQR 271 >gi|194098867|ref|YP_002001931.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291043590|ref|ZP_06569306.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|293398902|ref|ZP_06643067.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|193934157|gb|ACF29981.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae NCCP11945] gi|291012053|gb|EFE04042.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae DGI2] gi|291610316|gb|EFF39426.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae F62] gi|317164441|gb|ADV07982.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae TCDC-NG08107] Length = 296 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 22 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 82 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 135 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 136 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V Sbjct: 195 GNIYANESLFRAGISPHRPANRLKKKE------CAVLVETVKAVLQRAIETGGSTLRDFV 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 249 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 296 >gi|198241869|ref|YP_002217687.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690332|sp|B5FM59|FPG_SALDC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|197936385|gb|ACH73718.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 269 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDKIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|240016381|ref|ZP_04722921.1| formamidopyrimidine-DNA glycosylase [Neisseria gonorrhoeae FA6140] Length = 275 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 IVRFQTG-ILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ ++P L LGPEP +F YL + +K AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAVKLALMDNTVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R L + L++ ++ VL AI+ GGS+LR +V Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKE------CAVLVETVKAVLQRAIETGGSTLRGFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ ++VYG+ +PCL CG ++ + R TFYCT CQK Sbjct: 228 DSDGKSGYFQQEYTVYGRHNQPCL-RCGGLVVKETLGQRGTFYCTNCQK 275 >gi|311069404|ref|YP_003974327.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] gi|310869921|gb|ADP33396.1| formamidopyrimidine-DNA glycosylase [Bacillus atrophaeus 1942] Length = 275 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 156/291 (53%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVRGKTIKSVEIRWPNIIKRPAEPEEFARNLIGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLDH-FVMVSHLRMEGKYGLHQAEDP----DDKHVHVVFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D F YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFHPGEEMRELPLSQLGPEPDDKEFTDAYLKERLMKTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + KL +EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPETKANQLSAK------KIKKLHEEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK +PC + CG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLRHFVYGKKDKPCKT-CGTMISKIVVGGRGTHFCAKCQK 274 >gi|239632071|ref|ZP_04675102.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526536|gb|EEQ65537.1| formamidopyrimidine-DNA glycosylase lyase mutM [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 282 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDANTPFD---KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|270265225|ref|ZP_06193487.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] gi|270040859|gb|EFA13961.1| formamidopyrimidine DNA glycosylase [Serratia odorifera 4Rx13] Length = 269 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIELDHG-WIIVHLGMSGSLRM----LAEETEAGKHDHVDLVISNGMTLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +F YL + K + +K L++ K+V G+ Sbjct: 110 RFGAWLWCED--LANSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L++ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAASLSKTEA------ELLVETIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RACGTPIESAKHGQRSTFFCRRCQR 269 >gi|75674239|ref|YP_316660.1| formamidopyrimidine-DNA glycolase [Nitrobacter winogradskyi Nb-255] gi|90101307|sp|Q3SWN3|FPG_NITWN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74419109|gb|ABA03308.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 127/297 (42%), Positives = 175/297 (58%), Gaps = 14/297 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ T+ RK+LRF F F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPAMEGATIVRAETRRKDLRFPFQTDFVARLEGQAVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC---AKPIKNPQ-----HNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + + P+ H+HV T + + Sbjct: 61 LADLASGDVLLMHLGMSGSFRVIDAAGVTVPGDFHRPRGEDRVHDHVRF-----TMSSRA 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +++NDPRRFG+M +V S P L+ LGPEP N F+A L H + ++LK ALL Sbjct: 116 EIVFNDPRRFGYMKIVARSALGDEPLLKGLGPEPLGNEFDAAVLAHGCRNRKTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEAL+RA+LSP R +L G P + +L+ I+ VL AI+AG Sbjct: 176 DQRVVAGLGNIYVCEALFRARLSPRRLAATLAMKTGAPSERAERLVGAIRDVLNQAIEAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSLRD+ G +GYFQ++F VY + G+ C C ++R Q GRSTF+C CQ Sbjct: 236 GSSLRDHRQTTGELGYFQHSFQVYDREGDKCRTPACKGAVKRFTQNGRSTFWCPVCQ 292 >gi|329296441|ref|ZP_08253777.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Plautia stali symbiont] Length = 269 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 146/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ H A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAIVRNPRLRWPVSHEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + +H+HV + + N + Y DPR Sbjct: 60 LLELPHG-WIIIHLGMSGSLRVLPGELPAA----KHDHVDLVMNNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ L LGPEP ++FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTTDPEGSSVLAHLGPEPLSDAFNGGYLYEKSRGKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRPAMSLSEAEA------ELLANTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QTDGKPGYFAQQLQVYGRAGEPC-RACGTPILSGKHGQRSTFWCPRCQ 268 >gi|154687040|ref|YP_001422201.1| formamidopyrimidine-DNA glycosylase [Bacillus amyloliquefaciens FZB42] gi|154352891|gb|ABS74970.1| MutM [Bacillus amyloliquefaciens FZB42] Length = 278 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + N+ + P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ ++ HL M G + + + +H HV +T+ T + Y D Sbjct: 64 LLFHLDH-YVMVSHLRMEGKYGLHQADEP----DDKHVHVVFHMTDGTQLR-----YRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PL LGPEP D +F A YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA++ P K SL + L EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRARIHPETKANSLSDGQ------IKTLHTEIKDTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G IG FQ VYGK EPC + CG MI +IV GR T +C CQK Sbjct: 228 INSQGEIGMFQLKHYVYGKKDEPCKT-CGTMISKIVVGGRGTHFCARCQK 276 >gi|153834860|ref|ZP_01987527.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] gi|148868731|gb|EDL67808.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi HY01] Length = 269 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAV--LGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ R+TF+C CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEALQEQKIGQRNTFFCGECQK 269 >gi|114332459|ref|YP_748681.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas eutropha C91] gi|122312915|sp|Q0AD66|FPG_NITEC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114309473|gb|ABI60716.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosomonas eutropha C91] Length = 271 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + +T + + LR+ G++I ++RRAKYL Sbjct: 1 MPELPEVEVTRRGIDAHLAGRYITQVKIRNYALRWPVSPELITLLPGQRINTITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++I+HLGMSGS + S + H+H + L N + + DPR Sbjct: 61 LFACSKG-TLIIHLGMSGSLRVLPVSTPSLL----HDHFELWLDNEKMLR-----FRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+P L+ LGPEP ++FN ++L + +++ ++K AL+NQ IV GI Sbjct: 111 RFGVI-LWWDGDVRQHPLLQKLGPEPLSDAFNGLFLHEKIQRRSISIKEALMNQHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP+ SL + +L+ ++ L AI+AGGSSLRD+ Sbjct: 170 GNIYANEALFHAGISPLIAAGSLSTA------LCARLVDAVKMTLQRAIEAGGSSLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G FQ + VYG+TG+PC CG ++ + Q RS+F+C CQK Sbjct: 224 DCDGSPGCFQQQYWVYGRTGQPC-RKCGALVSKTRQGQRSSFFCAQCQK 271 >gi|317494722|ref|ZP_07953134.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917324|gb|EFV38671.1| formamidopyrimidine-DNA glycosylase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 269 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + + + LR+ K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELL-RLSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I +H+HV + L++ + Y DPR Sbjct: 60 LIELADG-WIIVHLGMSGSVRILPADEPPQ----KHDHVDMILSSGMMLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCKDLDSSNVLAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++SP R L Q + L+ I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFTARISPDRPAGDLTQADAEV------LVATIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C CG+ I R+TF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRAGEAC-RVCGEKILSGKHGQRTTFFCPRCQK 269 >gi|62182219|ref|YP_218636.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75505480|sp|Q57IA7|FPG_SALCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|62129852|gb|AAX67555.1| formamidopyrimidine DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716707|gb|EFZ08278.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 269 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSGEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 269 >gi|315038862|ref|YP_004032430.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] gi|312276995|gb|ADQ59635.1| formamidopyrimidine-DNA glycosylase [Lactobacillus amylovorus GRL 1112] Length = 276 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKYHLTTPEAPKD----KHDHVEFIFTDGTVLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQVTGIGKLGPEPNTPEFSEQYFVSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSSANKIPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|258508755|ref|YP_003171506.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|257148682|emb|CAR87655.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] gi|259650061|dbj|BAI42223.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus GG] Length = 282 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDA---KTPLDKHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------IHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|260599932|ref|YP_003212503.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cronobacter turicensis z3032] gi|260219109|emb|CBA34464.1| Formamidopyrimidine-DNA glycosylase [Cronobacter turicensis z3032] Length = 269 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A K ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHA-LSDKPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP ++FN YL + KK +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRELEGHNVLAHLGPEPLSDAFNGAYLRDKCAKKKVAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L Q I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSEKE------CELLAQAIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R T++C CQK Sbjct: 222 QSDGKPGYFAQQLQVYGREGEPC-RVCGTPILAGKHAQRRTYWCRRCQK 269 >gi|161505738|ref|YP_001572850.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189044673|sp|A9MKN9|FPG_SALAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160867085|gb|ABX23708.1| hypothetical protein SARI_03914 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 269 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEAQPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + K+ + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKRKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSKEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPVVATKHAQRATFYCRHCQK 269 >gi|208807998|ref|ZP_03250335.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] gi|208727799|gb|EDZ77400.1| formamidopyrimidine-DNA glycosylase [Escherichia coli O157:H7 str. EC4206] Length = 270 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 148/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 RFG + T + L LGPEP + FN YL + K K +K L++ K+V G Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKEKKRTIKPWLMDNKLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D+ Sbjct: 168 VGNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 LQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 270 >gi|161507869|ref|YP_001577833.1| formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260103164|ref|ZP_05753401.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|172048344|sp|A8YWE6|FPG_LACH4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160348858|gb|ABX27532.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus DPC 4571] gi|260083023|gb|EEW67143.1| DNA-formamidopyrimidine glycosylase [Lactobacillus helveticus DSM 20075] gi|328464767|gb|EGF36085.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus helveticus MTCC 5463] Length = 276 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 160/288 (55%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTSDAPKD----KHDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P L Q N P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHP------LSQANKIPAEKVMELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|21730426|pdb|1K82|A Chain A, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730427|pdb|1K82|B Chain B, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730428|pdb|1K82|C Chain C, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna gi|21730429|pdb|1K82|D Chain D, Crystal Structure Of E.Coli Formamidopyrimidine-Dna Glycosylase (Fpg) Covalently Trapped With Dna Length = 268 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR + + T+ + LR+ + ++ V RRAKYLL Sbjct: 1 PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYLL 59 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +EL II+HLGMSGS I + + +H+HV + ++N + Y DPRR Sbjct: 60 LELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPRR 109 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + T + L LGPEP + FN YL + KK + +K L++ K+V G+G Sbjct: 110 FGA--WLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVG 167 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 NIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFLQ 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 SDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 268 >gi|152976968|ref|YP_001376485.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025720|gb|ABS23490.1| formamidopyrimidine-DNA glycosylase [Bacillus cytotoxicus NVH 391-98] Length = 276 Score = 316 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTMKDVIVTYPKLVKRPDDAELFKELLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G + + + +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKYFLCKSDDPVD----KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y+ PL LGPEP D YL + K N +K ALL+Q+++ Sbjct: 111 VRKFGTMHLFTKGEEYKEMPLADLGPEPFDPELTVEYLQKKLQKTNRKIKVALLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL +N + K+ L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIYPEREASSLAKNE------IEKIHAATVATLTEAVKRGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQN +VYGK GEPC++ CG I +IV GR T YC +CQ Sbjct: 225 YINSQGEIGSFQNLLNVYGKKGEPCVT-CGTAIEKIVVGGRGTHYCPHCQ 273 >gi|90414930|ref|ZP_01222894.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] gi|90323986|gb|EAS40582.1| formamidopyrimidine-DNA glycosylase [Photobacterium profundum 3TCK] Length = 269 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + VT I + LR+ P G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVVGQIVTKIIVRNPKLRWPIPEEIQQ-IEGQVIRKVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS + S I +H+HV + L++ + YNDPR Sbjct: 60 LLHTDVGYA-IVHLGMSGSLRVLPVS----IPPEKHDHVDLVLSSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + F A YL + K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWELPDLDHKVLSQLGPEPLSDDFTAKYLQDRAKGKRTAIKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + + + + EI+ VL AI+ GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPKRAAGEIS------AEKIALFVDEIKSVLAFAIEQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC C + + R++ +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKGGKPC-PRCDNPLSEMKIGQRASVFCSECQK 269 >gi|238750803|ref|ZP_04612301.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] gi|238710947|gb|EEQ03167.1| Formamidopyrimidine-DNA glycosylase [Yersinia rohdei ATCC 43380] Length = 269 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSEEILS-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTG-WIIVHLGMSGSLRILSSET----EAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDDFTAEYLFEKSRNKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL ++ T +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTARILPDRAAGSLTESEIT------RLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG ++ RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHLVEIAKHGQRSTFFCRHCQ 268 >gi|224823788|ref|ZP_03696897.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] gi|224604243|gb|EEG10417.1| formamidopyrimidine-DNA glycosylase [Lutiella nitroferrum 2002] Length = 272 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 161/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+TD+ + LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLTGATITDVVVREGRLRWPVPPALAATLSGLPVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +++VHLGMSGS + A +H+H+ + L T + Y DPR Sbjct: 61 LLEFASG-TLLVHLGMSGSLRLV----AADTPPQKHDHIDLILDGRT-----ALRYRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L +P L LGPEP ++F+A L + +++K L++ +V G+ Sbjct: 111 RFGAM-LWHIGPVEFHPLLAALGPEPLGDAFDADTLYRASRGRTTSIKQLLMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R R L + +L I+ +L AI+AGGS+LRD+V Sbjct: 170 GNIYANESLFQAGIRPGRAARRLTHAD------CERLAAAIKSILARAIEAGGSTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYFQ ++VYG+ EPC + CG +IR+I Q RS++YC +CQ Sbjct: 224 GASGKPGYFQQTYAVYGRAEEPCHT-CGSLIRQIRQGQRSSYYCPHCQ 270 >gi|209693776|ref|YP_002261704.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|209693803|ref|YP_002261731.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007727|emb|CAQ77843.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] gi|208007754|emb|CAQ77873.1| formamidopyrimidine-DNA glycosylase [Aliivibrio salmonicida LFI1238] Length = 272 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + + LR+ P G++I + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQK-LVGQRIQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+HLGMSGS I + I +H+HV + L + + YNDPR Sbjct: 60 MIDTPEG-TAIIHLGMSGSLRILDEA----IPTAKHDHVDLVLDSGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + L LGPEP + FN YL + K +K ++N IV G+ Sbjct: 110 KFGAWLYSEVG--VSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK++P +L + +L+ +I+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAKINPKAPVGTLTLAQ------IERLVSDIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ GE CL C +I+ R+TF+C CQ Sbjct: 222 QVDGKPGYFAQELQVYGRAGEACL-ICQSLIQEQKIGQRNTFWCEKCQ 268 >gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] Length = 275 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 151/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + +H + F+ A G+ I+DV RR K Sbjct: 1 MPELPEVETVRKTLKELVTGKEIGQVSIHWPKMIKQPGEAEQFADALAGQTILDVGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+I + + +++ HL M G + + K +H HV T+ + + Y D Sbjct: 61 FLIIYTD-DYALVSHLRMEGKYALYSKEEDKD----KHTHVIFHFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LGPEP F +L + N +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGEEFASLPLSQLGPEPFSEEFTPQFLQQRLAGTNRAVKTALLDQKAVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R SL D + +L +EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERLASSLSD------DEIGRLHKEIVATLSEAVEKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C + CG + RI+ GR T +C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEACKT-CGSTLERIIVGGRGTVFCPVCQ 273 >gi|85060184|ref|YP_455886.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] gi|123518744|sp|Q2NQU4|FPG_SODGM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84780704|dbj|BAE75481.1| formamidopyrimidine-DNA glycosylase [Sodalis glossinidius str. 'morsitans'] Length = 269 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A R ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPWVAGQTILRAEVRNARLRWPVDEEIIA-LRDQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE II+HLGMSG + +P +H+HV + + N + Y DPR Sbjct: 60 LLELEKG-WIIIHLGMSGRLRV----LPQPQPPEKHDHVDLVIGNG-----CIIRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + F+ +L + H K +++K L++ +V G+ Sbjct: 110 RFGA--WLWSDDLRTSRALAHLGPEPLSDKFDGRWLYQKSHNKRTSIKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + L + I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPGRAAGSLSEEEAG------LLAESIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I+ RSTF+C CQ Sbjct: 222 QSDGKPGYFVQELQVYGRGGEPC-RVCGTPIQMAKHGQRSTFFCPACQ 268 >gi|227534793|ref|ZP_03964842.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187549|gb|EEI67616.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 295 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 14 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + +H+HVT + + + + Y D R Sbjct: 74 LMRLSNGETIISHLRMEGRYYVVKDANTPFD---KHDHVTFTFQDGSQLR-----YRDLR 125 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 126 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 185 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 186 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 239 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 240 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 286 >gi|114799193|ref|YP_761947.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] gi|114739367|gb|ABI77492.1| formamidopyrimidine-DNA glycosylase [Hyphomonas neptunium ATCC 15444] Length = 297 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 122/293 (41%), Positives = 170/293 (58%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + + R +LRF P F+ G +I ++R+AK+L Sbjct: 17 MPELPEVETVRRGLAPVMEGRRIVKLEQRRADLRFSLPERFAERLSGARIDRLARQAKFL 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +++HLGM+G F I + H+HV + V Y Sbjct: 77 AAHLSTGEVLVMHLGMTGRFTIGGQMPGEFHYGAGGIAAHDHVVFHMEGGET-----VTY 131 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFGFM+L + YP L T+GPEP N F+ YL K + +K ALL+QK+ Sbjct: 132 NDPRRFGFMELWPAATFLAYPRLMTMGPEPLSNGFSHAYLDEALRGKAAPIKAALLDQKV 191 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GNIYVCEAL+R+ +SP R ++++ P +L I V+ +AI AGGSS+ Sbjct: 192 IAGLGNIYVCEALFRSGISPKRLSKTI------PGQRAARLAPAINAVIAEAIAAGGSSI 245 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DG++GYFQ+ F VY + G+ C S CG I+RIVQ+GRSTFYC CQ+ Sbjct: 246 SDFAATDGALGYFQHRFDVYDREGQACKS-CGMEIKRIVQSGRSTFYCPSCQR 297 >gi|253690458|ref|YP_003019648.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259647146|sp|C6DIB8|FPG_PECCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|251757036|gb|ACT15112.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 269 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNTRLRWPVSGEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELTRG-WIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWTDNPETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNENDAAV------LVSVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQK 269 >gi|261377763|ref|ZP_05982336.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] gi|269146052|gb|EEZ72470.1| DNA-formamidopyrimidine glycosylase [Neisseria cinerea ATCC 14685] Length = 275 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 14/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVETVILRQPKLRWQVNPALGDILSGQQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +++HLGMSGS I S + K +H+H ++ T + Y+DPR Sbjct: 61 IVRFPMG-ILLIHLGMSGSLRIFTPSDERIGKPGKHDHTDFVFSDGTVLR-----YHDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E ++ +P L LGPEP F A YL + + +K AL++ +V G+ Sbjct: 115 RFGAILWYE-GIEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP R + + L+ ++ VL AI+ GGS+L+D+V Sbjct: 174 GNIYANESLFRAAVSPKRPACRVKKKE------CAVLVDAVKAVLRRAIETGGSTLKDFV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ ++VYG+ C+ CG +I + + R TFYC CQK Sbjct: 228 DSNGKSGYFQQEYTVYGRHNLQCV-RCGGLIVKEILGQRGTFYCPNCQK 275 >gi|319946541|ref|ZP_08020776.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] gi|319747287|gb|EFV99545.1| DNA-formamidopyrimidine glycosylase [Streptococcus australis ATCC 700641] Length = 274 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRLGLEKLILGKTIQSVEVKYPKMIQTDLDAFRQDLPGQEIRAMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + + +H HV T+ + ++Y D R Sbjct: 61 LFYLT-DLVLISHLRMEGKYFFYPDE----VPLRKHAHVFFHFTDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPEFIDSYFLAKKIGPEPTEADFKEPAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + + +E VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTARE------VKAIRKETIAVLAQAVEKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 269 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELTRG-WIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWTDNPETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRTAGSLNENDAAI------LVSVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG +I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTLIETAKHGQRSTFFCRRCQK 269 >gi|171780160|ref|ZP_02921064.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281508|gb|EDT46943.1| hypothetical protein STRINF_01948 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 273 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F + G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLIVGREIVSVDVRVPKMVKTDLSAFESDLLGQTIQSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ II HL M G +++ + +H H+ L + + ++Y D R Sbjct: 61 LLNLD-EQVIISHLRMEGKYLLFEHQVPED----KHFHIFFGLDDGST-----LVYKDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV + Y R LGPEP F+ T + +K LL+Q +VAG+ Sbjct: 111 KFGTMELVAENQVAAYFQKRKLGPEPTKEDFDVAEFTRKLSASKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R+ SL + + L EI ++L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKIHPERQANSLQKAE------INLLHDEIIRILQLGIKKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKT EPC C I +I GR T +C CQK Sbjct: 225 NALGENGTMQEYLQVYGKTDEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|114571613|ref|YP_758293.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] gi|114342075|gb|ABI67355.1| DNA-(apurinic or apyrimidinic site) lyase [Maricaulis maris MCS10] Length = 287 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ ++ + + ++R NLR+ FP F+A G+++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLVPALEGRRILAVDVNRPNLRYPFPERFAARLAGRRVEAIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIE-HTSCAKP-------IKNPQHNHVTISLTNNTNTKKY 112 L L+ ++I HLGMSG F IE A+P NP+H+HV Sbjct: 61 LFRLDSGETMIGHLGMSGRFSIEVEGEVAQPGDFVHAAPANPKHDHVVFRAEGGVV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V YNDPRRFG+M+L T+ + + L LGPEP N F+ YL + + +K ALL Sbjct: 117 -VRYNDPRRFGYMELFPTADEASHKTLGALGPEPHGNEFSGAYLGEVLAGRRTPIKTALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q IVAG+GNIYVCEAL R+ +SP R + S+ P +L ++++ V+++AI+AG Sbjct: 176 DQSIVAGLGNIYVCEALHRSGISPRRVSASI------PGARAERLARDVRDVIVEAIEAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 GSSL+D+ DG++GYFQ+ F VY + G PC C I+R+VQ+GRST++C+ CQ+ Sbjct: 230 GSSLKDFASTDGALGYFQHGFRVYDRLGAPCPTPGCVGEIQRLVQSGRSTWFCSSCQR 287 >gi|52081409|ref|YP_080200.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|52786785|ref|YP_092614.1| formamidopyrimidine-DNA glycosylase [Bacillus licheniformis ATCC 14580] gi|319647317|ref|ZP_08001539.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] gi|81690937|sp|Q65G93|FPG_BACLD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52004620|gb|AAU24562.1| formamidopyrimidine-DNA glycosidase [Bacillus licheniformis ATCC 14580] gi|52349287|gb|AAU41921.1| MutM [Bacillus licheniformis ATCC 14580] gi|317390664|gb|EFV71469.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. BT1B_CT2] Length = 275 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + + R + P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAGLVRGKTIDAVDVRWTKIIKRPEEPEEFARLLAGQTIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + ++ HL M G + + +H HV T+ + + Y D Sbjct: 61 FLLFHLD-DCVMVSHLRMEGKYGLHQNDEPLD----KHVHVIFRFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PLR LGPEP + F A YL + K N ++K ALL+Q+ V Sbjct: 111 VRKFGTMHLFKPGEELTELPLRQLGPEPFSSEFTADYLRERLKKTNRSVKTALLDQRTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P L + L +EI + L +A++AGGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPEATANKLTKKQTV------LLHKEIIQTLKEAVEAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYG+ EPC CG I + V GR T +C CQK Sbjct: 225 YINSQGEIGMFQLKLFVYGRKDEPC-KKCGSPIEKTVVGGRGTHFCIKCQK 274 >gi|90580917|ref|ZP_01236719.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] gi|90437988|gb|EAS63177.1| formamidopyrimidine-DNA glycosylase [Vibrio angustum S14] Length = 269 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDVGYA-IVHLGMSGSLRVLPVGTP----VEKHDHVDLVLTSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDDFNVEYLHEKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVAEIKSVLAFAIKQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKALSEAKIGQRATVFCSDCQK 269 >gi|269965915|ref|ZP_06180008.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] gi|269829468|gb|EEZ83709.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 40B] Length = 269 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + +H+HV + L++ + YNDPR Sbjct: 60 LIETNKG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLSSGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQE------WGLLVENIKMTLEIAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|84501265|ref|ZP_00999470.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] gi|84390556|gb|EAQ03044.1| formamidopyrimidine-DNA glycosylase [Oceanicola batsensis HTCC2597] Length = 283 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 174/294 (59%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + ++R +LR+ FP + + G+++ + RR+KY+ Sbjct: 1 MPELPEVETVRAGLAPAMEGEVIARAQVNRPDLRWPFPENMAGRLSGRRVDRLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L +L+ ++++HLGMSG + + + +H+HV + N RV + Sbjct: 61 LADLDSQETLLIHLGMSGRMTVSGDPLGRFVHEHPAAEKHDHVVFDMANGA-----RVTF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 NDPRRFG MDL+ T +P L +LGPEP N+FN Y + S +K LL+QK+ Sbjct: 116 NDPRRFGAMDLMATPETEAHPLLASLGPEPLGNAFNEAYFVAAVKHRRSPIKAVLLDQKV 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA +SP R+ + L L+ I+ VL AI AGGSSL Sbjct: 176 VAGLGNIYVCEALYRAGISPSRRADRISVTR------LATLVPIIRDVLNAAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ++F VYG+ GEPC C IRR VQ+GRS+F+C CQ+ Sbjct: 230 RDYRRADGELGYFQHSFDVYGREGEPCRTPGCSATIRRTVQSGRSSFHCPQCQR 283 >gi|227524688|ref|ZP_03954737.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] gi|227088172|gb|EEI23484.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus hilgardii ATCC 8290] Length = 280 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E +H H+ LT+ + YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTP----LSKHTHIVFHLTDGRQLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRMNLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVVE------LKLLRKSIIDEIKRAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|191638698|ref|YP_001987864.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei BL23] gi|190713000|emb|CAQ67006.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus casei BL23] gi|327382739|gb|AEA54215.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei LC2W] gi|327385926|gb|AEA57400.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei BD-II] Length = 282 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDASTPFD---KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|56964473|ref|YP_176204.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] gi|81678825|sp|Q5WEG7|FPG_BACSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56910716|dbj|BAD65243.1| formamidopyrimidine-DNA glycosylase [Bacillus clausii KSM-K16] Length = 276 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++KN T+ D+ + + D F +G+ I D+ RR K Sbjct: 1 MPELPEVETVRRTLLQLVKNKTIADVDVGWPKMIKEPDDVERFIQLLKGQTIEDIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + + K +H HV S T+ + + Y D Sbjct: 61 FLLFVL-NDYVLVSHLRMEGRYGLYQPTDEKT----KHTHVVFSFTDGSELR-----YAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LG EP F L + K +K ALL+QK V Sbjct: 111 VRKFGTMHLFAKGAEHVAMPLAQLGVEPFSEQFTVELLEQAYAKTTRAIKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R SL K+ + L +EI++ L +AI+AGGSS++ Sbjct: 171 GLGNIYVDEALFHAGIHPERTASSLS------KEEYHNLHKEIKRTLKEAIEAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ +PC +C I + V GR T YC CQ Sbjct: 225 YVNGQGEIGMFQQQLHVYGRKQQPC-HHCDTAIEKTVVGGRGTHYCPNCQ 273 >gi|168232573|ref|ZP_02657631.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472197|ref|ZP_03078181.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458561|gb|EDX47400.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333284|gb|EDZ20048.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 269 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLVHLGPEPLSDEFNGEYLRQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGTPIVATKHAQRATFYCRHCQK 269 >gi|332159689|ref|YP_004296266.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603788|emb|CBY25286.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica Y11] gi|325663919|gb|ADZ40563.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859992|emb|CBX70320.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica W22703] Length = 269 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYVVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTG-WIIVHLGMSGSLRI----LPEETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTETEIT------QLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|323466098|gb|ADX69785.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus helveticus H10] Length = 276 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 160/288 (55%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F + GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLIKGKTIEKVILWYPKIVATDHEKFLSELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTISDAPKD----KHDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP + F + YL + +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSSEFTSEYLVNGLKRKKKNIKNTLLDQSVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWR K+ P L Q N P + + +L +I +++ +AI G+++ ++ Sbjct: 172 GNIYVDEVLWRTKIHP------LSQANKIPAEKVIELHDQINQIITEAIKLQGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G +G FQ+ VYG GEPC CG +I GR T +C +CQ Sbjct: 226 NANGQVGGFQSKLQVYGHVGEPC-PVCGTKFEKIKVNGRGTTFCPHCQ 272 >gi|301047424|ref|ZP_07194504.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] gi|300300698|gb|EFJ57083.1| formamidopyrimidine-DNA glycosylase [Escherichia coli MS 185-1] Length = 269 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVEPSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCEKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L + I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 269 >gi|296876082|ref|ZP_06900136.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] gi|296432793|gb|EFH18586.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus parasanguinis ATCC 15912] Length = 274 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDLDAFRQDLPGQEIRVLGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + + +H H+ T+ + +Y D R Sbjct: 61 LFYLT-DLVLISHLRMEGKYFFYPDE----VPFRKHAHIFFHFTDGSTM-----VYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPEFIDSYFLTKKIGPEPTEADFKEQAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + +E VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTAREA------KAIRKETIAVLAQAVEKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|91974694|ref|YP_567353.1| formamidopyrimidine-DNA glycosylase [Rhodopseudomonas palustris BisB5] gi|123749485|sp|Q13EN7|FPG_RHOPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91681150|gb|ABE37452.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodopseudomonas palustris BisB5] Length = 293 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 130/298 (43%), Positives = 176/298 (59%), Gaps = 14/298 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L M+ + +R +LRF F A G+ + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPAMEGFRIARAVTNRDDLRFPLQKDFVARLTGQIVTGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 L +L +++HLGMSGSF + A ++ H+HV +++ Sbjct: 61 LADLASGDVLLMHLGMSGSFRVVAADGAHTPGEFHHPRSEDRTHDHVVFDMSSGA----- 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVI+NDPRRFGFM + + P L+ LGPEP N+F+A+ L K ++LK ALL Sbjct: 116 RVIFNDPRRFGFMKIFPRAAIDDEPHLKGLGPEPLGNAFDAVMLARACAGKQTSLKAALL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+GNIYVCEALWRA LSP RK +L P D +L I+ VL DAI AG Sbjct: 176 DQRVVAGLGNIYVCEALWRAHLSPKRKAATLANRKNEPTDHALRLTDAIRAVLGDAIKAG 235 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRD+ G +GYFQ++F+ Y + GE C + CG ++R VQ GRSTF+C+ CQK Sbjct: 236 GSSLRDHRQTSGELGYFQHSFAAYDREGERCRTDGCGGAVKRFVQNGRSTFWCSGCQK 293 >gi|307709150|ref|ZP_07645609.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] gi|307620096|gb|EFN99213.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK564] Length = 274 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR L ++ ++ I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETIRRGLEKLILGKKISSIEIRYPKMIKTDLDEFQKEVPGQIIESMERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP+ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPSKQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|307704700|ref|ZP_07641599.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] gi|307621747|gb|EFO00785.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK597] Length = 274 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEIRYPKMIKTDLNEFQKELPGQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPYQ----VPERKHAHVFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPSEQDFDVQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQECV-RCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|330447136|ref|ZP_08310786.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491327|dbj|GAA05283.1| formamidopyrimidine-DNA glycosylase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 269 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV +I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVVDQTVKEIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDAGYA-IVHLGMSGSLRVLPVGTP----VEKHDHVDLVLTSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN YL + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDEFNVEYLHQKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVTEIKSVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKPLSEAKIGQRATVFCVDCQK 269 >gi|199599522|ref|ZP_03212911.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] gi|199589591|gb|EDY97708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus HN001] Length = 282 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKKITAISTNWEKILINGLATFQKQVVGAAVNTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDA---KTPLDKHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAKGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|50119109|ref|YP_048276.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] gi|81693474|sp|Q6DAV4|FPG_ERWCT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49609635|emb|CAG73068.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] Length = 269 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVGHTILYAEVRNARLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + + + + Y DPR Sbjct: 60 LIELTHG-WIIVHLGMSGSLRI----LPEYSEPEKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L LGPEP + F A YL K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWTDSLETSSVLAHLGPEPLEAEFFADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +N+ L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRAAGSLNENDADV------LVRVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIETAKHGQRSTFFCRRCQ 268 >gi|294501499|ref|YP_003565199.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] gi|294351436|gb|ADE71765.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium QM B1551] Length = 277 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ + +++ HL M G + + + + +H HV T+ T + Y D Sbjct: 61 FLKIVLD-DYTMVSHLRMEGKYALHENAE----EPDKHVHVFFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYEEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|227513545|ref|ZP_03943594.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] gi|227083418|gb|EEI18730.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus buchneri ATCC 11577] Length = 280 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 145/288 (50%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ A + + I + RR KYL Sbjct: 1 MPELPEVETVRRGLTELVAGSQIRTVDVLYPKMINLPPEDFTNALKNQIIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + L+I+ HL M G + +E +H H+ LT+ + YND R Sbjct: 61 FIRINNGLTIVSHLRMEGKYDVEPEGTP----LSKHTHIVFHLTDGRQLR-----YNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++LV+T + L+T+GPEP + Y+ F K +K LL+Q +AG+ Sbjct: 112 KFGRINLVDTGHELTVAGLKTIGPEPTERDLTLDYMRKIFGKSKKLVKPFLLDQSNIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L L + I + AID G+++ Y Sbjct: 172 GNIYADEVLWLSKINPKQPVNTLSVVE------LKLLRKSIIDEIKRAIDGHGTTVHSYS 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN +VYG+ GEPCL CG I +I A R T +C CQ Sbjct: 226 NAYGEAGNFQNHLNVYGRQGEPCL-RCGTPIEKIKLAQRGTHFCPNCQ 272 >gi|154254090|ref|YP_001414914.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] gi|171769697|sp|A7HZC4|FPG_PARL1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|154158040|gb|ABS65257.1| formamidopyrimidine-DNA glycosylase [Parvibaculum lavamentivorans DS-1] Length = 293 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 128/304 (42%), Positives = 176/304 (57%), Gaps = 26/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + R +LRF P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVRRGLAPALEGRRIVHVTQRRPDLRFPLPELFAKRLTGRRVIRLERRAKYI 60 Query: 61 LIELE------GNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNN 106 L+ +E +I+HLGMSG F + S + H+H+ + + Sbjct: 61 LVYMEPAKSGGAEDVLIMHLGMSGRFTVHGPSGSSAPGLFHLGMPGGETHDHIVFDMEDG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 T RV+Y D RRFGFMDLV L LGPEP N F+A+ L + + + Sbjct: 121 T-----RVVYADHRRFGFMDLVAEPELASSRHLAALGPEPLGNEFSALVLAERLKGRRAP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL+Q+ VAG+GNIYVCEAL+RA +SP+R S+ + +L I+ VL Sbjct: 176 IKSALLDQRTVAGLGNIYVCEALYRAGISPLRTAASIGPAR------VERLTAAIRAVLQ 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCT 285 DAI AGGS+LRDY DG +GYFQ+AF+VYG+ GE C CG +RRIVQ+ RSTFYC Sbjct: 230 DAIAAGGSTLRDYAATDGELGYFQHAFAVYGREGEACSKPGCGGTVRRIVQSARSTFYCP 289 Query: 286 YCQK 289 CQ+ Sbjct: 290 ACQR 293 >gi|332969356|gb|EGK08381.1| formamidopyrimidine-DNA glycosylase [Kingella kingae ATCC 23330] Length = 272 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + + + + +RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHINGKKIVQTIVRQPKLRWQVPSDLADILQHQTVRQCTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ +++HLGMSGS I + +H+H + T + Y+DPR Sbjct: 61 LIQLDTG-VLLIHLGMSGSLRIFRDTLPD---AGKHDHADFVFEDGTVLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ + LR LG EP ++ F A YL + K+ +K A+++ IV G+ Sbjct: 112 RFGAILWLAGVAEH-HELLRNLGVEPLNDEFTADYLFDRLRGKHRAIKLAIMDNAIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP R +SL + L+ I+++L AI+ GGS+LRD+V Sbjct: 171 GNIYANESLFQAAISPNRPAQSLSKQE------CADLVVAIKQILARAIETGGSTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G CL C +I + V R TFYC CQ+ Sbjct: 225 DSDGKSGYFQQEYKVYGRQGAGCL-RCSGLIEKSVLGQRGTFYCVQCQR 272 >gi|260779657|ref|ZP_05888547.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] gi|260604466|gb|EEX30770.1| formamidopyrimidine-DNA glycosylase [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D PH G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLAGQTVAKLTFRTPKLRWDIPHELKK-MEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + ++ +H+HV + LTN + YNDPR Sbjct: 60 LIETDVGSA-IVHLGMSGSLRVLDAD----MEPGKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ L +GPEP F+A Y+ + K +K +++ K V G+ Sbjct: 110 RFGAWLWTEDG---EHDALGHMGPEPLTEDFDAQYIADKAKNKRVAVKQFIMDNKAVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R +L +L++EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSARIHPTRSAGTLTAKE------WQRLVKEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK GE C +CG+ I R+TF+C +CQK Sbjct: 221 QADGKPGYFAQELQIYGKAGEAC-PSCGEAIEEQKIGQRNTFFCRHCQK 268 >gi|296332104|ref|ZP_06874568.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675501|ref|YP_003867173.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150875|gb|EFG91760.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413745|gb|ADM38864.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 276 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYGLHQAEEP----DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGLEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQK Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQK 274 >gi|221310849|ref|ZP_03592696.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|221315175|ref|ZP_03596980.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320092|ref|ZP_03601386.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. JH642] gi|221324374|ref|ZP_03605668.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767671|ref|NP_390786.2| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|7531268|sp|O34403|FPG_BACSU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|225185299|emb|CAB14868.2| formamidopyrimidine-DNA glycosidase [Bacillus subtilis subsp. subtilis str. 168] Length = 276 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYGLHQAEEP----DDKHVHVIFTMTDGTQLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Sbjct: 171 GLGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 225 YINSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 273 >gi|258625891|ref|ZP_05720766.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] gi|258581855|gb|EEW06729.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM603] Length = 269 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLS------LDDWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|260770731|ref|ZP_05879661.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] gi|260614312|gb|EEX39501.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii CIP 102972] Length = 278 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETVRSLTFRTPKLRWDIPAEL-KQMEGQVITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS + +H+HV ++LTN + YNDPR Sbjct: 60 MIETSVGSA-IVHLGMSGSLRVLDGD----FPPAKHDHVDLTLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L +GPEP + FNA YL H+ KK +K+ +++ KIV G+ Sbjct: 110 RFGAWLWCPAGEHHEV--LGHMGPEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P+R SL + T L+ +I+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAHIHPLRPAHSLSEAEWTS------LVADIKAVLTTAIAQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC CG+ I + R++F+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKKGQPC-PRCGEPIAELKIGQRNSFFCLQCQ 268 >gi|312868208|ref|ZP_07728408.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] gi|311095953|gb|EFQ54197.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis F0405] Length = 274 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILEKTIQSVEVKYAKMIQTDLDAFCQDLPGQEIRAMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + + +H HV T+ + ++Y D R Sbjct: 61 LFYLT-DLVLISHLRMEGKYFFYPDE----VPLRKHAHVFFHFTDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 111 KFGTMEVLVPELVDSYFLAKKIGPEPTEADFKDPAFQAALKKSKKPIKSALLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + +E VL A+ GGS++R Y Sbjct: 171 GNIYVDEVLYRAKVHPARLGQSLTAREA------KAIRKETIAVLAQAVKKGGSTIRSYS 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 225 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 272 >gi|238764332|ref|ZP_04625283.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] gi|238697483|gb|EEP90249.1| Formamidopyrimidine-DNA glycosylase [Yersinia kristensenii ATCC 33638] Length = 269 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQQVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTG-WIIVHLGMSGSLRI----LSEETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP N F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSSVLAHLGPEPLSNEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTEAEVT------QLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RCCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|295706847|ref|YP_003599922.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] gi|294804506|gb|ADF41572.1| formamidopyrimidine-DNA glycosylase [Bacillus megaterium DSM 319] Length = 277 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ + T+ + + N+ R + F A G+ I DV RR K Sbjct: 1 MPELPEVETVRRTLIELASGKTIERVTVKWPNIIKRPEQVEQFCDALVGQTIRDVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ + +++ HL M G + + + + +H HV T+ T + Y D Sbjct: 61 FLKIVLD-DYTMVSHLRMEGKYALHENAE----EPDKHVHVFFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + +PPL LGPEP D +FN L + K + +K LL+Q +V Sbjct: 111 VRKFGTMHLFKKGEEDLFPPLIGLGPEPFDETFNPSQLKMRIGKTSRKIKPVLLDQNVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R L KL +EI L +A+ GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERVASQLTDEE------YEKLYKEIVATLQEAVKQGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GE C CG I + V GR T C CQ Sbjct: 225 YVNTQGQIGMFQQQLYVYGRKGESC-KMCGTPIEKFVVGGRGTHICPNCQ 273 >gi|229552557|ref|ZP_04441282.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|258539930|ref|YP_003174429.1| formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] gi|229314109|gb|EEN80082.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus rhamnosus LMS2-1] gi|257151606|emb|CAR90578.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus rhamnosus Lc 705] Length = 282 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++K+ +T I + + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTAFQKQVVGAAVTTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++I+ HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LIRLNNGMTIVSHLRMEGRYYVVSDA---KTPLDKHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + P L LGPEP +F+ + + + +K+ LL+Q +VAGI Sbjct: 113 KFGRMRLIHTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQTVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +KL+P++ +L + ++ L I K L DAI AGG+S YV Sbjct: 173 GNIYADEVLWLSKLNPLQPANTLTKAE------VHTLHDAIIKELDDAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ+A VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQDALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|227115115|ref|ZP_03828771.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 269 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + LR+ + + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILS-LSDEPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELTRG-WIIVHLGMSGSLRV----LPEYSEPEKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L LGPEP + F+A YL K + +K +++ K+V G+ Sbjct: 110 RFGA--WLWTDNLETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL +++ L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGIHPDRTAGSLNESDAAI------LVGVIKQVLQLSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELRVYGRNGEPC-RTCGTPIEIAKHGQRSTFFCRRCQK 269 >gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215630|sp|A6TFM6|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 269 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDVPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIVHLGMSGSLRI----LSEELPAEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T +P L LGPEP ++FNA YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTRTLEGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + + KL+ L+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFSAGIHPDRLASSLSREECEQLVKVIKLV------LLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG + A R+TFYC CQK Sbjct: 222 QSDGKPGYFAQELQVYGRKGEPC-RICGMPVVGTKHAQRATFYCRQCQK 269 >gi|238783983|ref|ZP_04627999.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] gi|238715091|gb|EEQ07087.1| Formamidopyrimidine-DNA glycosylase [Yersinia bercovieri ATCC 43970] Length = 269 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLELPTG-WIIVHLGMSGSLRVLPEETAA----GKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP ++ FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWATDLETSNVLAHLGPEPLNDEFNPQYLFDKSRNKRTLVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTQAE------ISLLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CGQ+I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGQLIEIAKHGQRSTFFCRHCQ 268 >gi|22124009|ref|NP_667432.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis KIM 10] gi|45439918|ref|NP_991457.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51594407|ref|YP_068598.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108809481|ref|YP_653397.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|108813958|ref|YP_649725.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Nepal516] gi|150260884|ref|ZP_01917612.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|153948540|ref|YP_001399065.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162418456|ref|YP_001604698.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165926106|ref|ZP_02221938.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936106|ref|ZP_02224675.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|166011428|ref|ZP_02232326.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213712|ref|ZP_02239747.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402103|ref|ZP_02307580.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419226|ref|ZP_02310979.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426672|ref|ZP_02318425.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469342|ref|ZP_02334046.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis FV-1] gi|170026359|ref|YP_001722864.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186893395|ref|YP_001870507.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|218927273|ref|YP_002345148.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|229836165|ref|ZP_04456333.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|229839901|ref|ZP_04460060.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841983|ref|ZP_04462138.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229904488|ref|ZP_04519599.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|270488487|ref|ZP_06205561.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294502157|ref|YP_003566219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|21362543|sp|Q8ZJP0|FPG_YERPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81691945|sp|Q66GD3|FPG_YERPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122979351|sp|Q1C270|FPG_YERPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123372834|sp|Q1CD05|FPG_YERPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166988465|sp|A7FCT7|FPG_YERP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238687318|sp|A9R677|FPG_YERPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238688491|sp|B1JQX0|FPG_YERPY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238691335|sp|B2JYN6|FPG_YERPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21956751|gb|AAM83683.1|AE013609_8 formamidopyrimidine DNA glycosylase [Yersinia pestis KIM 10] gi|45434773|gb|AAS60334.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001] gi|51587689|emb|CAH19289.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 32953] gi|108777606|gb|ABG20125.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Yersinia pestis Nepal516] gi|108781394|gb|ABG15452.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Antiqua] gi|115345884|emb|CAL18742.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CO92] gi|149290292|gb|EDM40369.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis CA88-4125] gi|152960035|gb|ABS47496.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis IP 31758] gi|162351271|gb|ABX85219.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Angola] gi|165915720|gb|EDR34328.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. IP275] gi|165921966|gb|EDR39143.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989574|gb|EDR41875.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205114|gb|EDR49594.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963220|gb|EDR59241.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048478|gb|EDR59886.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054361|gb|EDR64178.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752893|gb|ACA70411.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis YPIII] gi|186696421|gb|ACC87050.1| formamidopyrimidine-DNA glycosylase [Yersinia pseudotuberculosis PB1/+] gi|229678606|gb|EEO74711.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Nepal516] gi|229690293|gb|EEO82347.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. India 195] gi|229696267|gb|EEO86314.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706613|gb|EEO92619.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis Pestoides A] gi|262360236|gb|ACY56957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D106004] gi|262364183|gb|ACY60740.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis D182038] gi|270336991|gb|EFA47768.1| DNA-formamidopyrimidine glycosylase [Yersinia pestis KIM D27] gi|294352616|gb|ADE62957.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Z176003] gi|320013406|gb|ADV96977.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 269 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLELPKG-WIIIHLGMSGSLRVLSEETAA----EKHDHVDLVVSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|323497067|ref|ZP_08102090.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] gi|323317911|gb|EGA70899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] Length = 269 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 146/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ + +++RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLIGEKIAKLTFRTPKLRWDIPVELKK-LEGQVVRNITRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + A +H+HV + L N + YNDPR Sbjct: 60 LIETDAGSA-IVHLGMSGSLRVLDAEIA----PGKHDHVDLKLANGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L GPEP + FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWSEDG---HHSVLENAGPEPLTDEFNAEYIAAKAINKKVAVKQFIMDNKVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + L + L+ EI++VL AI GG++L+D+ Sbjct: 167 GNIYANESLFSAGIHPTKAAGQLTERQ------WQLLVVEIKQVLDTAIKQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC C I + R+TF+C CQK Sbjct: 221 QADGKPGYFAQELQVYGKKGEPC-PQCAGPIEELKIGQRNTFFCNQCQK 268 >gi|145601093|ref|YP_001165169.1| formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] gi|166198758|sp|A4TSD4|FPG_YERPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145212789|gb|ABP42196.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Yersinia pestis Pestoides F] Length = 278 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILT-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLELPKG-WIIIHLGMSGSLRVLSEETAA----EKHDHVDLVVSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPDRAAGSLTDAESV------LLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHPIEIAKHGQRSTFFCRHCQ 268 >gi|325957303|ref|YP_004292715.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] gi|325333868|gb|ADZ07776.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus acidophilus 30SC] Length = 276 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLNDNLTIVSHLRMEGKYHLTTPEVPKD----KHDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTELQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSLANKIPADKVEDLRKNINETIKIAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHAGEAC-PRCGTTLEKIKVSGRGTTFCPHCQ 272 >gi|238789560|ref|ZP_04633344.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] gi|238722313|gb|EEQ13969.1| Formamidopyrimidine-DNA glycosylase [Yersinia frederiksenii ATCC 33641] Length = 269 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLAGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTG-WIIVHLGMSGSLRI----LSEETEPEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F YL + K + +K L++ KIV G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFTTNYLFEKSRNKRTVVKQWLMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL ++ + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPERAAGSLTESE------IARLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RQCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|254229482|ref|ZP_04922897.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262392591|ref|YP_003284445.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|151938053|gb|EDN56896.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] gi|262336185|gb|ACY49980.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. Ex25] Length = 269 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPIELKK-LEGQVIRAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + IVHLGMSGS + +H+HV + L++ + YNDPR Sbjct: 60 LIETNTG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLSSGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP FNA Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPSRPAGKLTSQEWGG------LVENIKMTLEIAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGERLQELKIGQRNTFFCSECQK 269 >gi|149182833|ref|ZP_01861294.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] gi|148849448|gb|EDL63637.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. SG-1] Length = 274 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + + + + D F + +G+ I V RR K Sbjct: 1 MPELPEVETVRRTLAELVTGKRIKSVSVFWPKMVKLPDEVEEFKLSLQGETIQGVDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+++ + S++ HL M G + + + +H HV + T + Y D Sbjct: 61 FLILQTDR-YSLVSHLRMEGRYGVFPGDE----EVEKHTHVIFHFEDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP +F YLT + K +K LL+Q ++ Sbjct: 111 VRKFGTMHLFPKGEENLSLPLSQLGPEPFSPNFTVNYLTEKLAKTERAVKAVLLDQTVLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+ + P RK +S+ ++ + KL EI L +A++ GGS++R Sbjct: 171 GLGNIYVDEALFRSGIHPARKAKSVKKSE------MKKLHNEIIDTLSEAVEQGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ E C +CG+ I + V AGR T +C CQK Sbjct: 225 YVNSQGQIGMFQQQLFVYGRKNEEC-RSCGKPIEKNVTAGRGTHFCPNCQK 274 >gi|81429015|ref|YP_396015.1| formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] gi|90101304|sp|Q38VS5|FPG_LACSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78610657|emb|CAI55708.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus sakei subsp. sakei 23K] Length = 278 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 141/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + TV+ I + + + F+A G++I V RR KYL Sbjct: 1 MPELPEVENVRRGLETLAVGKTVSAIDIRWSKIIVNPDEVFTAGLVGQQITAVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+++ HL M G + + AK +H HV T+ + Y D R Sbjct: 61 LIRFGEQLTVVSHLRMEGKYEVV----AKEAPISKHTHVIFEFTDGQQMR-----YLDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + L+ LGPEP +F + K + +K LL+QK+V G+ Sbjct: 112 KFGRMQLIETGQENTVAGLKDLGPEPTPTTFLKADFYQRLQKHHKAIKPLLLDQKVVTGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW + + P L + +L EI L AI+ GG+++ ++ Sbjct: 172 GNIYVDETLWLSHIHPETPANDLTRAETD------RLHDEIIAELELAINHGGTTVNTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ VYGK G PC CG I +I A R T +C CQ Sbjct: 226 NATGHAGAFQEMLHVYGKKGVPC-ERCGTPIEKIKVAQRGTHFCPKCQ 272 >gi|307133078|ref|YP_003885094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] gi|306530607|gb|ADN00538.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dickeya dadantii 3937] Length = 269 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGHTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELPTG-WIIVHLGMSGSLRV----LPEYSEPDKHDHVDLVMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL Q + + +K +++ K+V G+ Sbjct: 110 RFGAWLWCDDPATSSV--LAHLGPEPLSDDFSGRYLFAQSRGRKTPIKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L++ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGVLPNRPAGSLSEVEAD------QLVRSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC +CG I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRSGEPC-HHCGTPIESIKQGQRSTFFCKCCQR 269 >gi|197106888|ref|YP_002132265.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] gi|229541078|sp|B4RC43|FPG_PHEZH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|196480308|gb|ACG79836.1| formamidopyrimidine-DNA glycosylase [Phenylobacterium zucineum HLK1] Length = 287 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 124/298 (41%), Positives = 170/298 (57%), Gaps = 20/298 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V++ + + R +LRF P F G I+ + RRAKYL Sbjct: 1 MPELPEVETVRGGLAPVLEGRRLVRVEARRPDLRFPLPPGFVQILTGSTIVKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--------PIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGMSG F I H + P +P+H HV Sbjct: 61 LGRLDREDTLVMHLGMSGRFEIAHPEGEERPGRFHYAPDPDPKHAHVVFETEAG-----V 115 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+ Y DPRRFG+M LV T+ +P LGPEP + F+A +L F + K LL Sbjct: 116 RITYYDPRRFGYMSLVNTATLDLHPWFAGLGPEPLSDDFDAAHLKAAFTGRRQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+IVAG+GNIYVCEAL RA++SP + + + + L+ I+ VL +AI AG Sbjct: 176 DQRIVAGLGNIYVCEALNRARISPFKPAGRISRPR------IEVLVAAIKDVLREAIAAG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRDY DG++GYFQ++F Y + G+PC + C +I R VQAGRSTFYC CQ+ Sbjct: 230 GSTLRDYAQADGALGYFQHSFRTYDREGQPCRNDGCRGVIGREVQAGRSTFYCPVCQR 287 >gi|37528666|ref|NP_932011.1| formamidopyrimidine-DNA glycosylase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39931200|sp|Q7MY36|FPG_PHOLL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|36788105|emb|CAE17229.1| formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 269 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ + RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMK-LSDQLVLSIQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LIELANG-WIIVHLGMSGSLRI----LPEERPAEKHDHVDLVMADGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSDDLERCSVLAHLGPEPLSDDFNGFYLYTRSSNKKTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++L + + L + I+KVL +I+ GG++LRD++ Sbjct: 168 GNIYANEALFTAHIQPDRPAQTLTEREA------HLLAETIKKVLQRSIERGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG+ I I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRAGEPC-RICGEQIESIKLGQRSTFFCRHCQ 268 >gi|89076362|ref|ZP_01162695.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] gi|89047933|gb|EAR53524.1| putative formamidopyrimidine-DNA glycosylase [Photobacterium sp. SKA34] Length = 269 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TV I + LR+ P A G+ I V+RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHVIDQTVKQIIIRNPRLRWPIPEAI-KAIEGQVIRGVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + + IVHLGMSGS + +H+HV + LT+ + YNDPR Sbjct: 60 LLETDVGYA-IVHLGMSGSLRVLPVGAP----VEKHDHVDLVLTSGEVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E +P L +GPEP + FN +L + K + +K +++ +V G+ Sbjct: 110 RFGAWLWEEKG--VTHPVLEKMGPEPLSDEFNVEHLHQKAQGKRTAIKQFIMDNHVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + T KL++EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFAAGIHPKRAAGKISLARMT------KLVEEIKSVLAFAIKQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G+PC CG+ + R+T +C+ CQK Sbjct: 222 NADGKPGYFAQELQVYGKAGKPC-PKCGKTLSEAKIGQRATVFCSDCQK 269 >gi|227892836|ref|ZP_04010641.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] gi|227865338|gb|EEJ72759.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus ultunensis DSM 16047] Length = 276 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 153/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKIID+ R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLVKGKTIKKVILWYPKIVATDHDKFVEELPGKKIIDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKD----KHDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LGPEP + F+ Y +K N+KN LL+Q+ VAG+ Sbjct: 112 KFGRMQLILTGTERQITGIGKLGPEPNSSEFSEQYFIDSLKRKKKNIKNTLLDQRTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++ + P L N P++ + +L Q I + A G+++ Y+ Sbjct: 172 GNIYVDETLWQSGIHP------LSAANKIPEEKVKQLRQNINHTITVATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG GE CL CG ++ +I +GR T +C +CQ Sbjct: 226 DANGKTGGYQKMLKVYGHAGEKCLK-CGTILEKIKVSGRGTTFCPHCQ 272 >gi|15603010|ref|NP_246082.1| formamidopyrimidine-DNA glycosylase [Pasteurella multocida subsp. multocida str. Pm70] gi|13431514|sp|P57910|FPG_PASMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12721492|gb|AAK03229.1| Fpg [Pasteurella multocida subsp. multocida str. Pm70] Length = 270 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ A +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEEL-AQITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+LE +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID----KHDHLDIVVNNGKV-----VRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEK--LDEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + +L+++I++VL +AI GG++L+D++ Sbjct: 168 GNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 222 QPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|293393616|ref|ZP_06637926.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] gi|291423951|gb|EFE97170.1| DNA-formamidopyrimidine glycosylase [Serratia odorifera DSM 4582] Length = 269 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ A + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILA-LSDRPVRSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS + A+ + +H+HV + ++N + Y DPR Sbjct: 60 LIELDHG-WIIVHLGMSGSLRM----LAEESEAGKHDHVDLVMSNGMILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP +F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCDDLAASNVLAHLGPEPLSEAFDGQYLFDKSRNKRTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R+ SL + L + I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPDRQAGSLTRAEAD------LLAETIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RVCGTPIESAKHGQRSTFFCRRCQ 268 >gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262] gi|21362544|sp|Q92BF1|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262] Length = 273 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVT----KHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVHPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-ICGTPIEKIKLNGRGTHFCPHCQK 273 >gi|258620580|ref|ZP_05715617.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] gi|258587095|gb|EEW11807.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM573] Length = 269 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWSIPQEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +TN R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPVAKHDHVDLVMTNGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMADKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSCIHPLRPANSLS------LDEWQTLVTNIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCPQCQ 268 >gi|153214741|ref|ZP_01949586.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|153800805|ref|ZP_01955391.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|153831394|ref|ZP_01984061.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] gi|124115177|gb|EAY33997.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 1587] gi|124123636|gb|EAY42379.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-3] gi|148873126|gb|EDL71261.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 623-39] Length = 269 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEEWQS------LVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|116495189|ref|YP_806923.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei ATCC 334] gi|116105339|gb|ABJ70481.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus casei ATCC 334] Length = 282 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDANTPFD---KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q L LGPEP ++F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + G PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREGTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|30250471|ref|NP_842541.1| formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] gi|39931259|sp|Q82S12|FPG_NITEU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30139312|emb|CAD86464.1| Formamidopyrimidine-DNA glycolase [Nitrosomonas europaea ATCC 19718] Length = 271 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 158/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RR + + +T I + LR+ A G++I ++RRAKYL Sbjct: 1 MPELPEVEITRRGIDTHLAGRVITQISIRNPVLRWPISAGLIALLPGQRINAIARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++I+HLGMSG+ + S + H+H + + N + + DPR Sbjct: 61 LFACSRG-TLIMHLGMSGNLRVLPESTPPQL----HDHFDLQVDNGMMLR-----FRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+P L+ LGPEP + F+ +L + +N+++K L+NQ IV GI Sbjct: 111 RFGAI-LWWDGDIRQHPLLQKLGPEPLSDDFDGQFLYTKTRGRNASIKEVLMNQHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A +SP+ SL +L+ ++ L+ AI AGGSSLRD+ Sbjct: 170 GNIYANEALFQAGISPLAAAGSLNTMQ------CERLVDAVKATLLRAIKAGGSSLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +GS GYFQ + VYG+ G+ C CG+++ + Q RSTF+C CQ Sbjct: 224 DCEGSPGYFQQQYWVYGRAGQSC-RQCGELVSKTRQGQRSTFFCARCQ 270 >gi|94499877|ref|ZP_01306413.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] gi|94428078|gb|EAT13052.1| formamidopyrimidine-DNA glycosylase [Oceanobacter sp. RED65] Length = 278 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 105/296 (35%), Positives = 156/296 (52%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + LR+ P + G ++ V RRAKYL Sbjct: 1 MPELPEVETTRAGIEPHIIGHQIKAFHVRQPQLRWPIPTELATLLTGNRVQAVRRRAKYL 60 Query: 61 LIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNTKKYR 113 LI++ ++I+HLGMSGS + + AKP +P +H H I + Sbjct: 61 LIDIAAGKSEDLLGTLIIHLGMSGSLRVIN---AKPYPDPKKHEHFDIEFDDC------L 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V +NDPRRFG L+ LGPEP ++FN Y+ + ++S +K +++ Sbjct: 112 VRFNDPRRFGACLWQAADEVD--SRLQHLGPEPLSDTFNGDYIFAKSRGRSSAIKTFIMD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IV G+GNIY E+L+ A ++P + + K +L+ I+ VL +AI GG Sbjct: 170 QRIVVGVGNIYASESLFLAGINPKKAAGKVS------KKKYQELVSAIKIVLDNAIAQGG 223 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD+ DG GYF VYG+ G C+ C Q I++IVQ RSTFYCT CQ+ Sbjct: 224 TTLRDFTSSDGKAGYFAQELRVYGREGLGCI-QCQQPIKQIVQGQRSTFYCTKCQR 278 >gi|322374469|ref|ZP_08048983.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] gi|321279969|gb|EFX57008.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C300] Length = 274 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEVRYPKMIKTDLDEFRKEVPGRVIESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV I + + ++Y D R Sbjct: 61 LFYL-KDKVLISHLRMEGKYFYYPDQ----VPERKHAHVLIHFEDGST-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPIEQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|238760449|ref|ZP_04621587.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] gi|238701344|gb|EEP93923.1| Formamidopyrimidine-DNA glycosylase [Yersinia aldovae ATCC 35236] Length = 269 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A ++++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQRVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LIELVTG-WIIVHLGMSGSLRI----LSEETEAAKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSSVLAHLGPEPLGDEFTADYLFDKSRSKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTASILPERAAGSLTKIEAI------QLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|254491571|ref|ZP_05104750.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxidans DMS010] gi|224463049|gb|EEF79319.1| formamidopyrimidine-DNA glycosylase [Methylophaga thiooxydans DMS010] Length = 272 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ P A + +++ V RRAKYL Sbjct: 1 MPELPEVETTRRGIQPYVEGNTISKMVVRHRGLRWPVPEQLEAIVKDQRVTKVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++I+HLGMSG + +H+HV I + N + + DPR Sbjct: 61 LFRCDKG-TLILHLGMSGRLRVLDND----HNIGKHDHVDIYINNGHVLR-----FTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E + + LGPEP + FNA YL + ++ N+K+ ++N +IV G+ Sbjct: 111 RFGAVLWTEADTD-THQLIAHLGPEPLADLFNADYLYQKAKGRSGNIKSFIMNGEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + K + +L++ I+ VL A+ AGG++LRD+ Sbjct: 170 GNIYANEALFLAGIHPAKAAGKIS------KAKMAELVEAIKLVLNRALLAGGTTLRDFR 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ EPCL C I I QA R+T++C CQ+ Sbjct: 224 KSDGKPGYFAQELNVYGRENEPCL-RCQAPINCIRQAQRATYFCKQCQR 271 >gi|123440466|ref|YP_001004460.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166198757|sp|A1JHR7|FPG_YERE8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122087427|emb|CAL10208.1| formamidopyrimidine-DNA glycosylase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 269 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL+ IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELKTG-WIIVHLGMSGSLRI----LPEETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + T +L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFTAGILPERAAGSLTETEIT------QLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGNVIEIAKHGQRSTFFCRHCQ 268 >gi|304319873|ref|YP_003853516.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] gi|303298776|gb|ADM08375.1| formamidopyrimidine-DNA glycosylase [Parvularcula bermudensis HTCC2503] Length = 286 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 130/294 (44%), Positives = 169/294 (57%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + L R +LRF FP+ FS G +I+ V RR KYL Sbjct: 1 MPELPEVETVRRGLAPSMAGAMIERVELRRPDLRFPFPNGFSQRLEGNRILSVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTNNTNTKKYRVI 115 + L ++I+HLGMSG F++ + H HV +L + + V Sbjct: 61 TLPLSTGETLIMHLGMSGRFLVSGERAPGRFYHASAGDVAHTHVRFTLQIPAEGRGH-VA 119 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFGFMDLV + +GPEP +F +L + + + LK+ LL+Q Sbjct: 120 YADPRRFGFMDLVASGELATCRHFAQMGPEPLSEAFTPDHLVAEARGRRTPLKSFLLDQS 179 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAG+GNIYVCEALWRA+LSP R SL T +L+ IQ L DAI+AGGS+ Sbjct: 180 TVAGLGNIYVCEALWRARLSPRRLAASLGPKRAT------RLVAAIQDALEDAIEAGGST 233 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRDY DG++GYFQ+ F VY + GEPC CG+ I R Q+GRSTF CT CQ+ Sbjct: 234 LRDYHAADGAMGYFQHRFDVYDREGEPC-RQCGRSISRFAQSGRSTFSCTTCQR 286 >gi|238918039|ref|YP_002931553.1| formamidopyrimidine-DNA glycosylase, [Edwardsiella ictaluri 93-146] gi|259647333|sp|C5B9D8|FPG_EDWI9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238867608|gb|ACR67319.1| formamidopyrimidine-DNA glycosylase, putative [Edwardsiella ictaluri 93-146] Length = 269 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLT-LRDRPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL I++HLGMSGS I +H+H+ + LT+ + Y DPR Sbjct: 60 LLELPEG-WIVIHLGMSGSVRILPALTPPQ----KHDHIDLLLTDGMMLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +F+A YL + + + +K L++ +V G+ Sbjct: 110 RFGAWLWYDS--LATASVLAHLGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL D + L+Q I+ VL +ID GG++LRD++ Sbjct: 168 GNIYASESLFSAQIHPDRLAGSLS------ADEAHLLVQTIKAVLQRSIDQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE CL+ CG I+R R+TFYC +CQ+ Sbjct: 222 QADGKPGYFAQQLQVYGRAGEACLT-CGTTIKRSKHGQRTTFYCPHCQR 269 >gi|238754767|ref|ZP_04616119.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] gi|238707075|gb|EEP99440.1| Formamidopyrimidine-DNA glycosylase [Yersinia ruckeri ATCC 29473] Length = 269 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHNIQYAIVRNARLRWPVSDEILA-LSDQLVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + L+N + Y DPR Sbjct: 60 LLELPRG-WIIIHLGMSGSLRI----LPEETEAEKHDHVDLVLSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + S L LGPEP +F+A YL K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWASDLTTSSVLAHLGPEPLSEAFSASYLFSLSRNKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R SL + L+ I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGISPERPAGSLTEPEA------ELLVTTIKRVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIESARHGQRSTFFCRNCQ 268 >gi|194017136|ref|ZP_03055748.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] gi|194011004|gb|EDW20574.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus ATCC 7061] Length = 277 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRLVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + +H HV + T+ T + Y+D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYRVHEAHEPYD----KHVHVVFTFTDGTELR-----YHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEERELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L + L ++I L A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLS------LESCKVLHKQIIDTLQVAVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC + CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPCQT-CGSIIEKTVVGGRGTHFCVTCQK 274 >gi|56421263|ref|YP_148581.1| formamidopyrimidine-DNA glycosylase [Geobacillus kaustophilus HTA426] gi|81675729|sp|Q5KWC3|FPG_GEOKA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56381105|dbj|BAD77013.1| formamidopyrimidine-DNA glycosidase [Geobacillus kaustophilus HTA426] Length = 274 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|229543561|ref|ZP_04432621.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] gi|229327981|gb|EEN93656.1| formamidopyrimidine-DNA glycosylase [Bacillus coagulans 36D1] Length = 277 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L ++ T+ + + + F+ A G+ I + RR K Sbjct: 1 MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLHTEAFADALAGETIRSLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ + +++ HL M G + + + +H H+ + + Y D Sbjct: 61 FLIFYTDH-YALVSHLRMEGRYRVYD----QNEPVEKHTHMIFHFQSGKELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP ++F YL Q K N+K+ LL+Q +++ Sbjct: 111 VRKFGTMHLFLKGEELSSLPLSKLGPEPLSDTFTEKYLYGQLKKTERNVKSCLLDQTVIS 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L+RA + P RK +SL + + ++ L EI + L +A++ GGS++R Sbjct: 171 GLGNIYVDESLFRAHIYPERKAKSLTKKD------VHLLHSEIIQTLQEAVEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ GEPC CG I ++V AGR T YC CQK Sbjct: 225 YVNSQGQMGMFQLELYVYGRKGEPC-RKCGTPIEKMVTAGRGTHYCPNCQK 274 >gi|301066753|ref|YP_003788776.1| formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] gi|300439160|gb|ADK18926.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus casei str. Zhang] Length = 282 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 15/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L+ ++KN +T I + + + + F G +I + RR KYL Sbjct: 1 MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G + + + +H+HVT + + + + Y D R Sbjct: 61 LMRLSNGETIISHLRMEGRYYVVKDASTPFD---KHDHVTFTFQDGSQLR-----YRDLR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L++T + Q P L LGPEP +F+ + + + +K+ LL+Q +VAG+ Sbjct: 113 KFGRMRLIKTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW ++L+P++ +L + L I + L AI AGG+S YV Sbjct: 173 GNIYADEVLWLSRLNPLQPADTLKSKE------IKTLHDAIIQELNAAIAAGGTSAHTYV 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQNA VY + PC CG I +I R T YC +CQ Sbjct: 227 DAEGNRGSFQNALHVYDREDTPCD-RCGTTIVKIKVGQRGTHYCPHCQ 273 >gi|269137427|ref|YP_003294127.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|267983087|gb|ACY82916.1| formamidopyrimidine-DNA glycosylase [Edwardsiella tarda EIB202] gi|304557501|gb|ADM40165.1| Formamidopyrimidine-DNA glycosylase [Edwardsiella tarda FL6-60] Length = 269 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T++ + + + LR+ R + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPFLEGKTLSHLTVRQPRLRWPVSETLLT-LRDRPILSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L I++HLGMSGS I +H+HV + LT+ + Y DPR Sbjct: 60 LLALPEG-WIVIHLGMSGSVRI----LPAQTPPQKHDHVDLLLTDGMMLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP +F+A YL + + + +K L++ +V G+ Sbjct: 110 RFGAWLWYDD--LATASVLAHLGPEPLSEAFSAEYLLERARGRRTAVKPWLMDNTLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P R SL + + L+Q I+ VL +ID GG++LRD++ Sbjct: 168 GNIYASESLFSAQIHPDRLAGSLSADEAS------LLVQTIKAVLQRSIDQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE CL+ CG I+ R+TFYC +CQ+ Sbjct: 222 QADGKPGYFAQQLQVYGRAGEACLT-CGTTIKSSKHGQRTTFYCPHCQR 269 >gi|145638327|ref|ZP_01793937.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272656|gb|EDK12563.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751473|gb|ADO81457.1| Formamidopyrimidine-DNA-glycosylase 2 [Haemophilus influenzae R2866] Length = 270 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ A +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEEL-AQITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+LE +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID----KHDHLDIVVNNGKV-----VRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEK--LNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + +L+++I++VL +AI GG++L+D++ Sbjct: 168 GNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++FYC CQK Sbjct: 222 QPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 269 >gi|331266547|ref|YP_004326177.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] gi|326683219|emb|CBZ00837.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis Uo5] Length = 274 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDLDEFQREVPGQVIESVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L N +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-NKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPKEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAAEAS------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQAC-SRCGTLIEKFQLGGRGTHFCPQCQR 272 >gi|34499517|ref|NP_903732.1| formamidopyrimidine-DNA glycosylase [Chromobacterium violaceum ATCC 12472] gi|39931210|sp|Q7NQS5|FPG_CHRVO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|34105367|gb|AAQ61722.1| DNA-formamidopyrimidine glycosylase [Chromobacterium violaceum ATCC 12472] Length = 270 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 158/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T+ + +LR+ P S G+K++ V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHLEGRTLLGAVVRNPSLRWPVPPDLSERVAGEKVLAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E ++++HLGMSGS + +H+H+ + L + + DPR Sbjct: 61 LLECESG-TLLIHLGMSGSLRVMPAGAP----PQKHDHLDLLLGEQV------LRFRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +P L+ LGPEP ++F+ L ++ S +K A+++ +V G+ Sbjct: 110 RFGAV-LWHLGPVEMHPLLQALGPEPLSDAFDGAALHQAIRRRGSPIKLAIMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A +SP R L + + +L EI+ VL AIDAGGS+LRD+V Sbjct: 169 GNIYANESLFHAGISPARAACDLSRAD------CDRLAAEIKAVLRRAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYFQ + VY + EPC CG IR+I Q RST+YC CQ Sbjct: 223 DSEGKPGYFQQTYMVYNRQEEPC-RLCGTPIRQIRQGQRSTYYCPLCQ 269 >gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378] Length = 273 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENEEVT----KHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R +L + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVHPERAANTLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-ICGTPIEKIKLNGRGTHFCPHCQK 273 >gi|327184033|gb|AEA32480.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus amylovorus GRL 1118] Length = 276 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLTPLIKGKTIEKVILWYPKIVATDHDKFINELPGKKIIRIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPEAPKD----KHDHVEFIFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Q + LG EP F+ Y +K N+KN LL+Q +VAG+ Sbjct: 112 KFGRMQLVLTGTERQTTGIGKLGVEPNTPEFSEQYFLSSLKRKKKNIKNVLLDQTVVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P D + L + I + + A + G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSLANKIPADKVEDLRKNINETIKIATEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQKMLQVYGHAGEAC-PRCGTTFEKIKVSGRGTTFCPHCQ 272 >gi|308047858|ref|YP_003911424.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] gi|307630048|gb|ADN74350.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Ferrimonas balearica DSM 9799] Length = 270 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V ++ + LR+ G+ I+ V+RRAKYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRVVEEVIVRNPRLRWPV-DPLIQQLVGQTILSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ E +I+HLGMSGS + + +H+H+ + L + + NDPR Sbjct: 60 LVDTEAG-VLILHLGMSGSLRVLDPVP----EPGKHDHLDLVLDSGAVLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q P L LGPEP +FNA L K S +K AL++ +V G+ Sbjct: 110 RFGAAIWWQLPLDAQ-PLLNKLGPEPLTAAFNAEQLAAALKGKTSAIKTALMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L K L KL++E++ VL AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPKRAAGNLS------KARLAKLVEEVKAVLARAIQQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ G+ C+ CG ++ I R+T YC +CQ+ Sbjct: 223 QADGKPGYFVQQLNVYGRGGQACV-QCGAQLKEIKLGQRATVYCGHCQR 270 >gi|84386871|ref|ZP_00989895.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] gi|84378161|gb|EAP95020.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus 12B01] Length = 269 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKIKSLTFRTPKLRWDIPQEL-KRLEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDMG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y++ + K+ +K +++ K+V G+ Sbjct: 110 RFGA--WLWSAPDEIHTVLLGSGPEPLTDDFNADYISEKAAKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ +++ P+R + Q T L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRIHPLRPANKITQAEWT------LLTEEIKQVLATAIKQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC +I+ + R+TF+C CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEKC-PNCEALIQELKIGQRNTFFCEECQ 268 >gi|83643461|ref|YP_431896.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|123535001|sp|Q2SPF3|FPG_HAHCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83631504|gb|ABC27471.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 271 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + ++ LR+ P AA +GK +++V+RRAKYL Sbjct: 1 MPELPEVETTRRGVAPHITGRKILQVNIYEPRLRWPVPMDLPAAAQGKTVLNVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L G+ ++ HLGMSG+ I + +H+HV I L + YNDPR Sbjct: 61 LINL-GDDELLFHLGMSGNLRIVAPETPRM----KHDHVDILLE-----GDITLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ ++P L+ LGPEP + F+ L + ++ S +K L++Q IV G+ Sbjct: 111 RFGCLLLLNPPT-QEHPLLKHLGPEPLSDQFSGELLYKRSRQRKSPVKTFLMDQAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L + ++KVL DAI+ GG++LRD+V Sbjct: 170 GNIYANEALFLAGIRPTRAAGEVSLKRYQV------LAEAVRKVLSDAINMGGATLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC + C ++ I R++ +C CQ+ Sbjct: 224 GGDGKPGYFQQTLRAYGRGGQPC-TVCQTELKEIKLGQRTSVFCPSCQR 271 >gi|238794405|ref|ZP_04638016.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] gi|238726306|gb|EEQ17849.1| Formamidopyrimidine-DNA glycosylase [Yersinia intermedia ATCC 29909] Length = 269 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LIELPTG-WIIVHLGMSGSLRI----LSDETEAEKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSNVLAHLGPEPLSDEFSPQYLFDKSRNKRTVIKQWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A L P R SL + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGLLPDRAAGSLTNAE------IVLLVATIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GEPC CG +I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RRCGHLIEIAKHGQRSTFFCRHCQ 268 >gi|157693308|ref|YP_001487770.1| formamidopyrimidine-DNA glycosylase [Bacillus pumilus SAFR-032] gi|157682066|gb|ABV63210.1| DNA-formamidopyrimidine glycosylase [Bacillus pumilus SAFR-032] Length = 276 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ T+ + + N+ R P F+ G+ I + RR K Sbjct: 1 MPELPEVETVRRTLKRLVEGKTIETVDIKWPNIIKRPGEPEEFARRMVGETIQTIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ ++ HL M G + + +H HV + T+ T + Y+D Sbjct: 61 FLLFHLDH-YVMVSHLRMEGKYRVHEAHEPYD----KHVHVVFTFTDGTELR-----YHD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + + PL LG EP D F YL Q K +K ALL+QKIV Sbjct: 111 VRKFGTMHLFQPGEEEKELPLSQLGYEPFDEQFTPEYLWEQLKKTTRVVKTALLDQKIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+++ + P K L + L ++I L A+DAGGS++R Sbjct: 171 GLGNIYVDEVLFKSGIHPETKANQLS------LESCKVLHKQIIDTLQVAVDAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y++ G IG FQ VY + GEPC + CG +I + V GR T +C CQK Sbjct: 225 YINSQGDIGTFQLQLLVYDRRGEPCQT-CGSIIEKTVVGGRGTHFCVTCQK 274 >gi|307609359|emb|CBW98845.1| hypothetical protein LPW_06351 [Legionella pneumophila 130b] Length = 274 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ +++HLGMSG I + +H+HV + + N + + DPR Sbjct: 61 LLHMDKGY-LLIHLGMSGHLRIVSQTA----NPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|254286323|ref|ZP_04961282.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] gi|150423738|gb|EDN15680.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae AM-19226] Length = 269 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRLANSLS------LDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|269959363|ref|ZP_06173746.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] gi|269835800|gb|EEZ89876.1| formamidopyrimidine-DNA glycosylase [Vibrio harveyi 1DA3] Length = 269 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKK-LEGQVIRNISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 LIETDEG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L +GPEP FNA Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSAPNEPHAV--LGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R L + L++ I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKSRIHPTRPAGKLTKKE------WQLLVENIKATLEIAIQQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CG+ ++ R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGETC-PECGEALQEQKIGQRNTFFCNVCQQ 269 >gi|52840799|ref|YP_094598.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81680527|sp|Q5ZY18|FPG_LEGPH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52627910|gb|AAU26651.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 274 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ +++HLGMSG I + +H+HV + + N + + DPR Sbjct: 61 LLHMDKGY-LLIHLGMSGHLRIVSQTA----NPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|261418257|ref|YP_003251939.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|319767783|ref|YP_004133284.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] gi|261374714|gb|ACX77457.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC61] gi|317112649|gb|ADU95141.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y412MC52] Length = 274 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K +K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRPVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ++ VYG+ GEPC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGAFQHSLFVYGRKGEPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] Length = 274 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L ++K + + + + L + P F G ++IDV RR KY Sbjct: 1 MPELPEVETVVRGLKELIKGVKINKVIIRETKLLVYPDPDTFIDLVEGSRVIDVLRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI+L+ N ++ HL M+G ++ + K +H H L + + + +N+ Sbjct: 61 ILIKLDNNRFLVFHLKMTGQLVVY----ERNNKYDKHTHFVFELEDGRDLR-----FNNM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV + L LGPEP + F ++ N+K LLNQK +AG Sbjct: 112 RKFGRVYLVTKGEFDKAGSLADLGPEPLSDEFTVDEFADIIKRRKGNIKGLLLNQKFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A +SP RK SL + + +L I+KVL I GG+S++DY Sbjct: 172 LGNIYADEALFEAGISPERKADSLDDSE------IERLYHAIRKVLKMGIKYGGTSMKDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G IG FQN VY KTGE C+ NCG I++ V GRS+ YC CQK Sbjct: 226 VNARGRIGEFQNKLKVYRKTGEECV-NCGHEIQKKVIRGRSSHYCPGCQK 274 >gi|322389988|ref|ZP_08063527.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] gi|321143301|gb|EFX38740.1| DNA-formamidopyrimidine glycosylase [Streptococcus parasanguinis ATCC 903] Length = 288 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 145/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQTDLDAFCQDLPGQEIRVMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +L +I HL M G + + +H HV T+ + ++Y D R Sbjct: 75 LFYLT-DLVLISHLRMEGKYFFYPDE----VPLRKHAHVFFHFTDGST-----LVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ L Y + +GPEP + F K +K+ALL+QK+VAG+ Sbjct: 125 KFGTMEVLIPELVDSYFLAKKIGPEPTEADFKEPAFQVALKKSKKPIKSALLDQKLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+RAK+ P R +SL + E VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLYRAKVHPARLGQSLTAREA------KAIRNETIAVLAQAVEKGGSTIRSYS 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTG+PCL CG I +I GR T +C +CQK Sbjct: 239 NAFGEDGTMQEEHQVYGKTGQPCL-RCGTPIEKIQLGGRGTHFCPHCQK 286 >gi|229524827|ref|ZP_04414232.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297581674|ref|ZP_06943596.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] gi|229338408|gb|EEO03425.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae bv. albensis VL426] gi|297534081|gb|EFH72920.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC385] Length = 269 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|327483101|gb|AEA77508.1| Formamidopyrimidine-DNA glycosylase [Vibrio cholerae LMA3894-4] Length = 269 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFISRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|149184948|ref|ZP_01863265.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] gi|148831059|gb|EDL49493.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. SD-21] Length = 271 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ T+T + ++R ++R FP A G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGETITRVTVNRPDMRRPFPPDLVQALTGASVTHLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++ HLGMSG + I+ P ++ +H+H+ I T +R NDPR Sbjct: 61 LIHTSRDHAMVFHLGMSGRWRID------PAEDEKHDHLVIE------TAGHRFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ + + P LGPEP + +L + +K LL+Q IVAG+ Sbjct: 109 RFGSVDLMTSGELVTWKPFAALGPEPLGDDLTPEHLREATRGRKQAIKLLLLDQSIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A + P + + L +L+ I+ VL +I GGS+LRD+ Sbjct: 169 GNIYVCEALWHAGIHPRKAGGKVTMPQ------LRRLVPAIKDVLERSIRDGGSTLRDFA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG++GYF F VYG+ GEPC G IRRIVQ GRST++C CQ+ Sbjct: 223 QPDGNLGYFATRFHVYGREGEPCHHEDGGTIRRIVQGGRSTWFCPVCQR 271 >gi|188532230|ref|YP_001906027.1| formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] gi|238689742|sp|B2VF70|FPG_ERWT9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|188027272|emb|CAO95115.1| Formamidopyrimidine-DNA glycosylase [Erwinia tasmaniensis Et1/99] Length = 269 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNERLRWPVSPEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPAG-WIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +SF+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCTDLDASSVLSHLGPEPLSDSFSASYLFEKSRGKRTAVKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEAEAG------LLVSTIKGVLMRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRAGEPC-RKCAMPIESSKHGQRSTFFCRRCQK 269 >gi|229087142|ref|ZP_04219292.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] gi|228696210|gb|EEL49045.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-44] Length = 276 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + L R D F RG+ I + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKIIKDVIVTYPKLVKRPDDAELFKEMLRGETIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ A +H HV T+ T + Y D Sbjct: 61 FLLLYVTK-YVIVSHLRMEGKYLLHEGDEAID----KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + +++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFEEMPLADLGPEPFDAELTPAYLQDKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVETLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPICQ 273 >gi|291614819|ref|YP_003524976.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] gi|291584931|gb|ADE12589.1| formamidopyrimidine-DNA glycosylase [Sideroxydans lithotrophicus ES-1] Length = 271 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 156/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + D+ + +LR+ P + RG + D+ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHLKQRRIVDVVIRNPDLRWPIPGNLPELLRGHIVQDLQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+ ++I+HLGMSGS I+ + +H+H + + N + DPR Sbjct: 61 LISF-GHGTLILHLGMSGSLRIQPLDTS----AEKHDHFDLVMDNGQ-----LLRLRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+P L +LGPEP F+A L K+ + +K +++ +V G+ Sbjct: 111 RFGAV-LWHQGDVAQHPLLASLGPEPLLAGFDADTLYAATRKRKAAIKLVIMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P + K+ +L I++VL AI GGSSLRDYV Sbjct: 170 GNIYANEALFRAGIRPQLAAGKIS------KERCARLTVTIKEVLRAAIRKGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ + YG+TGEPC C IR+I Q RSTFYC CQK Sbjct: 224 DSNGKQGYFQQHYFAYGRTGEPC-RVCATPIRQIRQGQRSTFYCPRCQK 271 >gi|253991835|ref|YP_003043191.1| formamidopyrimidine-DNA glycosylase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783285|emb|CAQ86450.1| formamidopyrimidine DNA glycosylase [Photorhabdus asymbiotica] Length = 269 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNVIQYAVVRNGRLRWPVAEEIMT-LSDRLVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL II+HLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LIELAEG-WIIIHLGMSGSLRI----LPEERPAEKHDHVDLVMADGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q L LGPEP + FN YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSNDLNQCSVLTHLGPEPLSDDFNGAYLYARSRNKKTLIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R +L + +Y L++ I+KVL +I+ GG++LRD++ Sbjct: 168 GNIYANEALFTAHIQPERPAHTLAERE------VYLLVETIKKVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+TGEPC CG I I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRTGEPC-RICGGNIASIKLGQRSTFFCCHCQ 268 >gi|330957096|gb|EGH57356.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDP--HNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ +++ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYASEALFAAGIDPRREAKTISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + TS +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTSAEVD----KHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL D + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTD------DQIKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|251791515|ref|YP_003006236.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] gi|247540136|gb|ACT08757.1| formamidopyrimidine-DNA glycosylase [Dickeya zeae Ech1591] Length = 269 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T++ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGISPWLVGHTISYAEVRNARLRWPVSPEILS-LSDVPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS + + + +H+HV + + + + Y DPR Sbjct: 60 LIELPTG-WIIVHLGMSGSLRV----LPEYCEPEKHDHVDLIMDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL Q + + +K +++ K+V G+ Sbjct: 110 RFGAWLWCDDPATSSV--LAHLGPEPLSDDFSGDYLFKQSRGRKTPVKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q +L I++VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFNAGILPERLAGSLSQAEAD------QLAHSIKQVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC +CG +I I Q RSTF+C CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRGGQPC-HHCGTLIDSIKQGQRSTFFCKRCQR 269 >gi|153826318|ref|ZP_01978985.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] gi|254225706|ref|ZP_04919313.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|125621826|gb|EAZ50153.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V51] gi|149739887|gb|EDM54074.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MZO-2] Length = 269 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGNA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPCLH-CGEPICEQKIAQRNTFFCPQCQ 268 >gi|306829344|ref|ZP_07462534.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] gi|304428430|gb|EFM31520.1| DNA-formamidopyrimidine glycosylase [Streptococcus mitis ATCC 6249] Length = 274 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVDIRYPKMIKTDLEEFQKELAGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + + +H HV + ++Y D R Sbjct: 61 LYYLT-DKVLISHLRMEGKYFYY----SDQVPERKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAS------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|15615714|ref|NP_244018.1| formamidopyrimidine-DNA glycosylase [Bacillus halodurans C-125] gi|17375861|sp|Q9K855|FPG_BACHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|10175774|dbj|BAB06871.1| formamidopyrimidine-DNA glycosidase [Bacillus halodurans C-125] Length = 274 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 154/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R D F +G+ I + RR K Sbjct: 1 MPELPEVETVRRTLAELVIGKTIEQVDVGWAKMIKRPDDVDQFKWLLKGQTIRSMGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + +++ HL M G + + + + +H HV + T + Y D Sbjct: 61 FLLFHLD-DYTLVSHLRMEGRYGLYQQNES----VAKHTHVRFVFGDGTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ + PPL LG EP + F+A LT + K + +K+ALL+Q I+ Sbjct: 111 VRKFGTMHLFQSGREQMEPPLAKLGVEPFSDQFSAKLLTERLSKTSRKIKSALLDQGIIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P R + + + L Q I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRARIHPERLAKDVTVAE------VKILHQAILNTLTEAVNLGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ GE C CG I + V GR T +C+ CQK Sbjct: 225 YVNGQGEMGMFQQRLDVYGRKGETC-RQCGTPITKTVVGGRGTHFCSVCQK 274 >gi|259906762|ref|YP_002647118.1| formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|224962384|emb|CAX53839.1| Formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae Ep1/96] gi|283476548|emb|CAY72376.1| formamidopyrimidine DNA glycosylase [Erwinia pyrifoliae DSM 12163] gi|310765972|gb|ADP10922.1| formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 269 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNARLRWPVSQEIHA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPTG-WIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP +SF+A YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCADLNGSSVLSHLGPEPLSDSFSARYLFEKSRGKRTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEQEAG------LLVSTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+TGEPC C + A RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGRTGEPC-RVCAMPVESSKHAQRSTFFCRRCQK 269 >gi|228999366|ref|ZP_04158945.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] gi|229006921|ref|ZP_04164551.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228754321|gb|EEM03736.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock1-4] gi|228760311|gb|EEM09278.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides Rock3-17] Length = 276 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ +H HV T+ T + Y D Sbjct: 61 FLLLYVTK-YVIVSHLRMEGKYLLHKDDEPVD----KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|145638232|ref|ZP_01793842.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|145272561|gb|EDK12468.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII] gi|309751387|gb|ADO81371.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2866] Length = 271 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|90101305|sp|Q65R59|FPG_MANSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ A +KI +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQL-AQISQQKITALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRIVSARDPVD----KHDHLDIVMNNGKIMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 110 RFGT--WLWSANLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L + L+++I++ L AI+ GG++L+D++ Sbjct: 168 GNIYANETLFMCGLHPEKITAKLTKAQ------CALLVEKIKQELKRAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 222 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 269 >gi|295425308|ref|ZP_06818011.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] gi|295065084|gb|EFG55989.1| DNA-formamidopyrimidine glycosylase [Lactobacillus amylolyticus DSM 11664] Length = 276 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKI+D+ R AKYL Sbjct: 1 MPEMPEVETVRRTLIPLVKGKTIKKVTLWYPKIVATDHQQFIDELPGKKILDIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTPDAPKD----KHDHVQFEFTDGT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q + LG EP F Y + +K+ N+KN LL+Q IVAG+ Sbjct: 112 KFGRMQLILTGTERQTTGIGKLGYEPNSKEFTEAYFIAKLKRKHKNIKNTLLDQSIVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L + P+D + +L +I + AI G+++ Y+ Sbjct: 172 GNIYVDEVLWQSKIHP------LSIASKIPEDKVKELHTKINHEISIAIKMRGTTVHTYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQ VYG GE C NCG +I GR T +C +CQ Sbjct: 226 DANGNAGGFQKMLQVYGHVGEAC-PNCGNKFEKIKVNGRGTTFCPHCQ 272 >gi|52425999|ref|YP_089136.1| formamidopyrimidine-DNA glycosylase [Mannheimia succiniciproducens MBEL55E] gi|52308051|gb|AAU38551.1| Nei protein [Mannheimia succiniciproducens MBEL55E] Length = 292 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR++ A +KI +SRRAKYL Sbjct: 23 MPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVSPQL-AQISQQKITALSRRAKYL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 82 IIHTEQGY-IIGHLGMSGSVRIVSARDPVD----KHDHLDIVMNNGKIMR-----YNDPR 131 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ ++ LGPEP + FNA YL + KK + +KN L++ +V G+ Sbjct: 132 RFGT--WLWSANLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFLMDNSVVVGV 189 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + T L + L+++I++ L AI+ GG++L+D++ Sbjct: 190 GNIYANETLFMCGLHPEKITAKLTKAQ------CALLVEKIKQELKRAIEQGGTTLKDFL 243 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC NCG I +V A R++++C CQK Sbjct: 244 QPDGRPGYFAQELQIYGKKGAPC-PNCGTKIESLVVAQRNSYFCPKCQK 291 >gi|295399493|ref|ZP_06809475.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|312109949|ref|YP_003988265.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] gi|294978959|gb|EFG54555.1| formamidopyrimidine-DNA glycosylase [Geobacillus thermoglucosidasius C56-YS93] gi|311215050|gb|ADP73654.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. Y4.1MC1] Length = 274 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ + TV D+ + + F +G+ I D+ RR K Sbjct: 1 MPELPEVETIRRTLIPLAAGKTVADVQVFWPRIIKHPANISEFIETIKGQTIRDIHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + +I HL M G + + A H HV T+ T + Y D Sbjct: 61 FLKFIFD-EHVLISHLRMEGRYAVSKKKDAI----EPHTHVIFQFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP F A +L + K N +K ALL+Q +V Sbjct: 111 VRKFGTMHLYPKGEEDSRLPLSQLGPEPFSEEFTANFLAKRLRKTNRTIKAALLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV EAL+RA + P R SL L +E+ L +A++ GGS++R Sbjct: 171 GFGNIYVDEALFRAGIHPERAASSLTDEEA------ACLHREMVATLQEAVEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GEPC CG I++ V AGR T YC +CQ Sbjct: 225 YVNTQGEIGMFQLQLFVYGRKGEPC-KRCGNPIQKTVVAGRGTHYCAFCQ 273 >gi|58040922|ref|YP_192886.1| formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] gi|81351172|sp|Q5FN17|FPG_GLUOX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58003336|gb|AAW62230.1| Formamidopyrimidine-DNA glycosylase [Gluconobacter oxydans 621H] Length = 277 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 162/291 (55%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + ++ + ++R +LR+ FP G ++ RRAKY+ Sbjct: 1 MPELPEVETVMRGFRDAFEGHRISHVTVNRPDLRWPFPADLREKLEGHHVLSFRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ LEG S+++HLGMSG I P H H+ + + R DPR Sbjct: 61 LVRLEGGWSMLLHLGMSGRLTIGR--AGTNATPPAHEHLVLETDSGA-----RAGLVDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV TS + + L LG EP ++ L F + S +K+ALL+QK++AG+ Sbjct: 114 RFGMVDLVRTSEEDSHRLLAHLGMEPLSDAMTGPALAELFRGRRSPIKSALLDQKLIAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+R + P R+ +L L + I ++L AI +GGSSLRDYV Sbjct: 174 GNIYVCEALFRCGIHPERQACTLTGEET------AALAEAIPQILEQAIASGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG--QMIRRIVQAGRSTFYCTYCQK 289 DG+ G FQ+ VYG+ G PC NCG I+RI QAGRSTF+C CQK Sbjct: 228 QADGTKGAFQDLHLVYGREGVPC-PNCGAEHPIQRITQAGRSTFFCPTCQK 277 >gi|323703152|ref|ZP_08114806.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] gi|323531929|gb|EGB21814.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum nigrificans DSM 574] Length = 277 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIID-VSRRAK 58 MPELPEVE + R+L + +T+T + + K +R P F+ GK++ + RR K Sbjct: 1 MPELPEVETVVRSLEKHLAGLTITAVDVFMPKVIRSPKPEVFAERIVGKQLQKKLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ L L+++VHL M+G + +H HV L N + + D Sbjct: 61 YLLLHLSDGLTLVVHLRMTGRLVYCDAETP----VEKHTHVIFHLDNGKQLR-----FTD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV TS + ++ LGPEP D SF +L + ++ + +K LL+Q +A Sbjct: 112 QRQFGRMQLVPTSEVNELSGIKDLGPEPLDESFTRDFLKKEIRRRRTRIKPLLLDQCFIA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA++ P R L + +L + I +V+ I G++ RD Sbjct: 172 GLGNIYADEALFRARVHPERIASDLSPRE------IARLHKAIVEVIAGGIKHRGTTFRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q VY + PC +CG+ I RI AGRS++YC CQK Sbjct: 226 YVDGEGRAGSYQQHLKVYNRENLPC-PHCGKPIARIKVAGRSSYYCPCCQK 275 >gi|212638360|ref|YP_002314880.1| formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] gi|212559840|gb|ACJ32895.1| Formamidopyrimidine-DNA glycosylase [Anoxybacillus flavithermus WK1] Length = 273 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L+ ++ T+ + +H + F +G+ I ++ RR K+ Sbjct: 1 MPELPEVETVRLTLLPLVVGKTIERVKVHWPKIIQHPDVATFCERLKGQTIHNIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ ++ ++ HL M G +I E QH H+ + T+ T + Y D Sbjct: 61 LLFQLD-DVVLVSHLRMEGRYIYEKEDAPFD----QHTHIFFTFTDQTELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + PPL ++G EP D F +LT Q + +K LL+Q IVAG Sbjct: 111 RKFGTMHLFSKGEELHVPPLSSIGVEPFDEQFTVAWLTDQLQRTKRTIKATLLDQTIVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R+ + P R +L + L + I + + +AI+ GGS++R Y Sbjct: 171 LGNIYVDEVLFRSSIHPERTAATLTIRE------IEALHEAIVQTIQEAIEKGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ G IG FQ VYG+ +PC CG+ I + A R T YC +CQ Sbjct: 225 VNTQGKIGKFQTQLYVYGRVNKPC-RRCGEPIVKTTVANRGTHYCKHCQ 272 >gi|320547275|ref|ZP_08041567.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] gi|320448079|gb|EFW88830.1| DNA-formamidopyrimidine glycosylase [Streptococcus equinus ATCC 9812] Length = 273 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + I + + F G+ + R KYL Sbjct: 1 MPELPEVETVRRGLERLIVGRKIVSIDVRVPKMIKTDLTAFETDIIGQTFQSIGRCGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ II HL M G +++ + +H H L N + ++Y D R Sbjct: 61 LLNLDR-QVIISHLRMEGKYLLFEDEVPEN----KHFHTFFKLDNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG MDL+E Y R LGPEP + +F+ Q +K LL+Q +V G+ Sbjct: 111 KFGTMDLLEKEQVADYFRQRKLGPEPTETAFDLATFAKQLKASKKVIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L I ++L I GGS++R Y Sbjct: 171 GNIYVDEALWAAKIHPKRTSDSLSDSE------ISLLRDSIIRILQLGIAKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTGEPC C I +I GR T +C CQK Sbjct: 225 NALGENGSMQDFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHFCPACQK 272 >gi|254498621|ref|ZP_05111340.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] gi|254352161|gb|EET10977.1| formamidopyrimidine DNA glycosylase [Legionella drancourtii LLAP12] Length = 271 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 167/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ T+ +I + NLR P++ GKKII V+RRAKY+ Sbjct: 1 MPELPEVETTKQGIKSHLEGQTIHEINVRNFNLRIPVPNNIDELCAGKKIIAVTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L +I+HLGMSG I + +H+H+T++LTN K + ++DPR Sbjct: 61 LIQLSRGY-LIIHLGMSGHLRIISGATI----PEKHDHITLNLTN-----KQALHFSDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V+ +Q+ L LGPEP F+ YL + KN +K+ +++ +IV G+ Sbjct: 111 RFGLFTYVD-ENPHQHQLLSHLGPEPLSEDFDGSYLYQRAKNKNKPIKSFIMDNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A+L P + T+++ + + L++ I+ VL AI++GG++LRD+ Sbjct: 170 GNIYATESLFLAQLHPNKPTKNVSEEQ------CHLLVKHIKAVLQQAIESGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ +PCL C ++I +V GRS+ +C CQ Sbjct: 224 AFDGKPGYFSILLQVYGRKNQPCLH-CQRLIETLVIGGRSSAFCPNCQ 270 >gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716] Length = 279 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 141/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR LM + + I ++ + F A G+ I + RR KYL Sbjct: 1 MPEMPEVETVRRGLMRIAAGRQIKGIDVNYGKTIENDVEEFRQALIGQTIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + T +H HV T+ T+ + Y D R Sbjct: 61 LFRFSNDLTMVSHLRMEGSYFNQPTGAEVD----KHTHVIFHFTDGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP + F Y K S +K LL+Q VAG+ Sbjct: 112 KFGRMHLVKTGEEMTVGGLKTIGPEPTEEDFQFDYFKQILKKSRSKIKPFLLDQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW+ +++P + SL D + +L + I + A G+++ + Sbjct: 172 GNIYADEVLWQTQINPEQPANSLTD------DQIKRLRENIIAEIARATAGHGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN YG +G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGQFQNELQAYGHSGDAC-PRCGTKLVKIKVAQRGTTFCPHCQ 272 >gi|148360789|ref|YP_001251996.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|296106144|ref|YP_003617844.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] gi|148282562|gb|ABQ56650.1| formamidopyrimidine DNA glycosylase [Legionella pneumophila str. Corby] gi|295648045|gb|ADG23892.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] Length = 274 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 157/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + +GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ +++HLGMSG I + +H+H+ + + N + + DPR Sbjct: 61 LLHMDKGY-LLIHLGMSGHLRIVSQTA----NPQKHDHIDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFN------ALTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|260912781|ref|ZP_05919267.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] gi|260633159|gb|EEX51324.1| DNA-formamidopyrimidine glycosylase [Pasteurella dagmatis ATCC 43325] Length = 270 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + ++ + I + + LR+ +K+ +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLEGFIIEKIVVRQPKLRWMVSEEL-KQITQQKVTGLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHTEQ-CYIIGHLGMSGSLRIVSPQDTVD----KHDHLDIVMNNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGA--WLWTDNLEEFHLFLKLGPEPLSEEFNADYLWKKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + SL + + +L++++++VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPEKAAGSLTKAQCS------QLVEQVKQVLTTAIQQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG + ++ R++FYC CQK Sbjct: 222 QPDGRPGYFSQKLLVYGNKDKPC-PKCGTKVESLMIGQRNSFYCPKCQK 269 >gi|221236758|ref|YP_002519195.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] gi|22001594|sp|Q9A259|FPG_CAUCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789431|sp|B8GVY4|FPG_CAUCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|220965931|gb|ACL97287.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus NA1000] Length = 287 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 116/297 (39%), Positives = 165/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I + + +H HV + Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL Sbjct: 117 -VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 286 >gi|54293547|ref|YP_125962.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] gi|81679294|sp|Q5WYY6|FPG_LEGPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53753379|emb|CAH14832.1| hypothetical protein lpl0599 [Legionella pneumophila str. Lens] Length = 274 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGCMITSVQVRNQKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ +++HLGMSG I + +H+HV + + N + + DPR Sbjct: 61 LLHMDKGY-LLIHLGMSGHLRIVSQTA----NPQKHDHVDLHINNG-----LALRFRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|260887311|ref|ZP_05898574.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|330838935|ref|YP_004413515.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] gi|260862947|gb|EEX77447.1| DNA-formamidopyrimidine glycosylase [Selenomonas sputigena ATCC 35185] gi|329746699|gb|AEC00056.1| formamidopyrimidine-DNA glycosylase [Selenomonas sputigena ATCC 35185] Length = 477 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L V +T++ + + +RF F + RG++I+ + RR KY Sbjct: 1 MPELPEVETIRRSLEKVAAGRRITEVDVLLPRTIRFPEVEAFRSRVRGQRILCLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ LE ++++HL M+G F +H L + + + + D Sbjct: 61 LMLPLESGETLLLHLRMTGRFYRRDADTP----TGRHVRAIFHLDDGSC-----LFFEDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L++ + +P +GPEP F+A YL K + +K+ LL+Q VAG Sbjct: 112 RTFGEIHLLQPQERKAFPAFSCMGPEPLTEEFDASYLYDAMQKSSQRIKSFLLDQGKVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+R+ +L + ++L Q I KV+ + I+ GG++ RDY Sbjct: 172 LGNIYVDEALFFAGVHPLRRAHTLNHDEA------FRLWQAINKVIAEGIEDGGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V +G G+ Q VY + GEPCL CG I +I GR T +C +CQ Sbjct: 226 VDGEGKSGFHQQKLRVYHREGEPCL-VCGTKIEKIRVGGRGTHFCPHCQ 273 >gi|59710737|ref|YP_203513.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] gi|75507118|sp|Q5E8M1|FPG_VIBF1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|59478838|gb|AAW84625.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio fischeri ES114] Length = 272 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ P G+++ + RRAKYL Sbjct: 1 MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQK-LVGQRVQSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + I+HLGMSGS + + + + +H+HV + L N + YNDPR Sbjct: 60 MIDTPKGSA-IIHLGMSGSLRVLD----EEVPSAKHDHVDLVLENGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + +Q L LGPEP N FN+ Y + K + +K ++N +V G+ Sbjct: 110 KFGAWLYSEVGVAHQV--LSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P SL + T L+ EI+KVL AI GG++L+D+ Sbjct: 168 GNIYASESLFMAQIHPKTSVGSLKASQIT------LLVAEIKKVLETAIKQGGTTLKDFN 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG GYF VYG+ + CL C +I+ R+TF+C +CQ Sbjct: 222 QVDGKPGYFAQELHVYGRAKKKCLL-CSSIIQEEKIGQRNTFWCGHCQ 268 >gi|254418470|ref|ZP_05032194.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] gi|196184647|gb|EDX79623.1| formamidopyrimidine-DNA glycosylase [Brevundimonas sp. BAL3] Length = 287 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 171/294 (58%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ ++ + ++R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLTPVLAGARLSRVRINRPDLRFPFPDRFVERLEGATVQRIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTISLTNNTNTKKYRVIY 116 L+ L + I HLGM+G F ++ T + + +H H + + R+ Y Sbjct: 61 LMPLSSGETWITHLGMTGRFTLDGTQLGEFEEAAPIAGKHEHFSGCAVRDG--ASTRIGY 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q+I Sbjct: 119 ADARRFGFMGLIPTDQVEVHPWFAGLGPEPLGNGFSGAHLVEAFVGKTQNIKVSLLDQRI 178 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP+ S+ K L +L ++ VL DAI AGGS+L Sbjct: 179 VAGLGNIYVCEALYRARISPLVAAGSVS------KVRLERLAAVVRDVLNDAIAAGGSTL 232 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ + +G GYFQ+ F VYG+ G+ C C ++ RIVQ GRSTFYC CQK Sbjct: 233 KDFANAEGGQGYFQHRFDVYGREGQACRGEGCSGVVARIVQGGRSTFYCPSCQK 286 >gi|217962065|ref|YP_002340635.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] gi|217063081|gb|ACJ77331.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH187] Length = 276 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ +IV GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKIVVGGRGTHYCPICQ 273 >gi|313633102|gb|EFS00002.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL N1-067] gi|313637952|gb|EFS03260.1| formamidopyrimidine-DNA glycosylase [Listeria seeligeri FSL S4-171] Length = 273 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNETD----EVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLLFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGKTGEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKTGEPCV-ICGTQIEKIKLNGRGTHFCPNCQK 273 >gi|240140864|ref|YP_002965344.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] gi|240010841|gb|ACS42067.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens AM1] Length = 299 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV + N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMVFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|270292906|ref|ZP_06199117.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] gi|270278885|gb|EFA24731.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M143] Length = 274 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKRISSLEIRYPKMIKTDLEEFQKELPGQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLEAYFISKKLGPEPKDQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R ++SL + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQSLTAEEAS------AIHDQTIAVLRQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTLIEKIQLGGRGTHFCPQCQR 272 >gi|229512786|ref|ZP_04402254.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] gi|229350296|gb|EEO15248.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TMA 21] Length = 269 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|2293273|gb|AAC00351.1| formamidopyrimidine-DNA glycosidase [Bacillus subtilis] Length = 278 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 64 LLFHLDH-YVMVSHLRMEGKYGLHQAEEP----DDKHVHVIFTMTDGTQLR-----YRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K L + L EI+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAEIKNTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 228 INSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|167622081|ref|YP_001672375.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] gi|189044677|sp|B0TN04|FPG_SHEHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167352103|gb|ABZ74716.1| formamidopyrimidine-DNA glycosylase [Shewanella halifaxensis HAW-EB4] Length = 271 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VTD+ + +LR+ P + G+ I +V RR KYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNQVTDLIVRNPSLRWPVP-EIAKQIIGQTIRNVRRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I S +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRILPASTP----VEKHDHIDLVLASGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FNA YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLAALANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVD------AERIEILVSEVKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQK Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGHLLSEIKLGQRATVFCSLCQK 270 >gi|261856609|ref|YP_003263892.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] gi|261837078|gb|ACX96845.1| formamidopyrimidine-DNA glycosylase [Halothiobacillus neapolitanus c2] Length = 281 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T + LR+ +A G+ II VSRR+KYL Sbjct: 1 MPELPEVETTRRGLEPHLLGQRITSATVFDSRLRWRVRDDLAAWLEGRLIIAVSRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E +++HLGMSGS I + +H+HV I + ++ N + ++DPR Sbjct: 61 LLHFENGERLLIHLGMSGSLRIVTPDIPR----RKHDHVEICINSSKNLR-----FHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + + L+ LGPEP ++F+ YL Q HK+ +K L+N IV G+ Sbjct: 112 RFGA--LLTDHEQAPHIRLQNLGPEPLSDAFDTHYLGTQLHKRKQAIKPCLMNAAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ + + P +L N + L+ I+ VL AI+ GG++LRD+V Sbjct: 170 GNIYANEVLFLSGIHPATPAHTLDHNQ------INLLVTAIKNVLARAIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VY + +PC C I + VQA R+T+YC CQ Sbjct: 224 REDGQPGYFKQTLNVYDRADQPC-RVCSTPIVKTVQAQRATYYCPVCQ 270 >gi|54296585|ref|YP_122954.1| formamidopyrimidine-DNA glycosylase [Legionella pneumophila str. Paris] gi|81679547|sp|Q5X7I9|FPG_LEGPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|53750370|emb|CAH11764.1| hypothetical protein lpp0616 [Legionella pneumophila str. Paris] Length = 274 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + ++ +T + + LR P + + GK I ++RR KY+ Sbjct: 1 MPELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ +I HLGMSG I + +H+HV + + N + + DPR Sbjct: 61 LLHMDKGYILI-HLGMSGHLRIVSQTA----NPQKHDHVDLHINNG-----LALRFCDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YQ+P L LGPEP + FN+ YL + K+ ++K+ +++ +IV GI Sbjct: 111 RFGLFIYID-ENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + + L I+K+L AI+AGG++LRD+ Sbjct: 170 GNIYAAESLFLAKIHPNTSAKKITTEEFNS------LTGHIKKILESAIEAGGTTLRDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ A VYG+ PCL C I +V AGR + +C +CQ Sbjct: 224 SSDGKPGYFRFALKVYGRKNLPCL-VCENKIETVVIAGRHSAFCPHCQ 270 >gi|167649030|ref|YP_001686693.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] gi|189044585|sp|B0T7D1|FPG_CAUSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167351460|gb|ABZ74195.1| formamidopyrimidine-DNA glycosylase [Caulobacter sp. K31] Length = 287 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 122/297 (41%), Positives = 165/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G KI+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L+ ++++HLGM+G F I S + + +H HV + Sbjct: 61 LVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAV---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P +GPEP F+A L F+ + K LL Sbjct: 117 -VTYYDPRRFGFMDLIATDKVDRHPWFAAMGPEPLGEGFDAKTLVAAFNGRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK VAG+GNIYVCEAL RA +SP + + P L I+ VL +A++ G Sbjct: 176 DQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKRLGP------LTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GSSL+D+ DG++GYFQ+ F VY + G+PC C MI R VQAGRSTF+C CQ Sbjct: 230 GSSLKDFAATDGALGYFQHRFRVYDREGQPCPTPGCKGMIGREVQAGRSTFFCPVCQ 286 >gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023] Length = 273 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMDENDEVT----KHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGESETKSIKKLGPEPLTPAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E ++AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFKAKVRPERAANSLSDKE------INRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I ++ GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-VCGTPIEKMKLNGRGTHFCPHCQK 273 >gi|229527276|ref|ZP_04416669.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] gi|229335284|gb|EEO00768.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 12129(1)] Length = 269 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAYSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PCL CG++I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPCLH-CGELICEQKIAQRNTFFCPQCQ 268 >gi|326793829|ref|YP_004311649.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] gi|326544593|gb|ADZ89813.1| Formamidopyrimidine-DNA glycosylase [Marinomonas mediterranea MMB-1] Length = 271 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N T+ + + + LR+ P A G+K+ VSRR KY+ Sbjct: 1 MPELPEVETTKRGIEPNIVNKTIQQVVIRQPKLRWPIPDA-VNALSGQKVESVSRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++I+HLGMSGS H+HV I +++ + Y DPR Sbjct: 60 GVHTKAG-TLIIHLGMSGSLYFVDAGTPPLF----HDHVDIEFSDSPIV----MRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + ++ L++LGPEP ++F+A YL + + +K +++ K+V G+ Sbjct: 111 RFGAM-LWQPGDWLEHELLKSLGPEPLTDAFHADYLYERAQGRKQAIKMFIMDSKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + + L + I++VL AI+ GG++L+D+V Sbjct: 170 GNIYANEALFKAGIHPKRAAGKISRAR------LEAFVASIKEVLSAAIEQGGTTLKDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VYG+ GE C+S C + I RST YC CQ Sbjct: 224 GGDGKPGYFKQELAVYGRGGEKCIS-CSNELSEIRLGQRSTVYCNNCQ 270 >gi|269103920|ref|ZP_06156617.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163818|gb|EEZ42314.1| formamidopyrimidine-DNA glycosylase [Photobacterium damselae subsp. damselae CIP 102761] Length = 269 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + IVHLGMSGS + A +H+HV + L++ + YNDPR Sbjct: 60 LLDTPVGSA-IVHLGMSGSLRVLPAGTA----PEKHDHVDLVLSSGEILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP ++F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDAFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEVTP------QALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCPQCQQ 269 >gi|228954855|ref|ZP_04116875.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804844|gb|EEM51443.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 276 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDPEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|229158188|ref|ZP_04286255.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] gi|228625146|gb|EEK81906.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 4342] Length = 276 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|30264656|ref|NP_847033.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Ames] gi|47530126|ref|YP_021475.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187476|ref|YP_030728.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49481341|ref|YP_038631.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140924|ref|YP_085906.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|65321953|ref|ZP_00394912.1| COG0266: Formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A2012] gi|118479733|ref|YP_896884.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis str. Al Hakam] gi|165869590|ref|ZP_02214248.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167634061|ref|ZP_02392384.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|167638114|ref|ZP_02396392.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|170685575|ref|ZP_02876798.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|170705602|ref|ZP_02896066.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|177651233|ref|ZP_02934064.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190569044|ref|ZP_03021944.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|196032694|ref|ZP_03100107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196047497|ref|ZP_03114708.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218905813|ref|YP_002453647.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225866563|ref|YP_002751941.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB102] gi|227817370|ref|YP_002817379.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CDC 684] gi|228917224|ref|ZP_04080781.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929633|ref|ZP_04092651.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935893|ref|ZP_04098703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948310|ref|ZP_04110593.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124152|ref|ZP_04253344.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|229186841|ref|ZP_04313996.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|229601163|ref|YP_002868865.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|254687393|ref|ZP_05151249.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. CNEVA-9066] gi|254724956|ref|ZP_05186739.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A1055] gi|254736693|ref|ZP_05194399.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Western North America USA6153] gi|254741730|ref|ZP_05199417.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Kruger B] gi|254754672|ref|ZP_05206707.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Vollum] gi|254757504|ref|ZP_05209531.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Australia 94] gi|301056091|ref|YP_003794302.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis CI] gi|39931254|sp|Q81L04|FPG_BACAN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81685955|sp|Q633L1|FPG_BACCZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81696636|sp|Q6HCU5|FPG_BACHK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|30259331|gb|AAP28519.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. Ames] gi|47505274|gb|AAT33950.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181403|gb|AAT56779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. Sterne] gi|49332897|gb|AAT63543.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974393|gb|AAU15943.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus E33L] gi|118418958|gb|ABK87377.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Bacillus thuringiensis str. Al Hakam] gi|164714419|gb|EDR19938.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0488] gi|167513931|gb|EDR89299.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0193] gi|167530862|gb|EDR93564.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0442] gi|170129727|gb|EDS98590.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0389] gi|170670039|gb|EDT20779.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0465] gi|172083059|gb|EDT68121.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis str. A0174] gi|190559826|gb|EDV13811.1| formamidopyrimidine-DNA glycosylase [Bacillus anthracis Tsiankovskii-I] gi|195994123|gb|EDX58078.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus W] gi|196021712|gb|EDX60408.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus 03BB108] gi|218534883|gb|ACK87281.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH820] gi|225786312|gb|ACO26529.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus 03BB102] gi|227007061|gb|ACP16804.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. CDC 684] gi|228596578|gb|EEK54243.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BGSC 6E1] gi|228659454|gb|EEL15102.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 95/8201] gi|228811297|gb|EEM57635.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823661|gb|EEM69483.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830020|gb|EEM75639.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842425|gb|EEM87516.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265571|gb|ACQ47208.1| DNA-formamidopyrimidine glycosylase [Bacillus anthracis str. A0248] gi|300378260|gb|ADK07164.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus biovar anthracis str. CI] Length = 276 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|262404958|ref|ZP_06081510.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] gi|262348797|gb|EEY97938.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. RC586] Length = 269 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL +I GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVSIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKPKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|58337812|ref|YP_194397.1| formamidopyrimidine-DNA glycosylase [Lactobacillus acidophilus NCFM] gi|227904461|ref|ZP_04022266.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] gi|75507557|sp|Q5FIV8|FPG_LACAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58255129|gb|AAV43366.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus NCFM] gi|227867836|gb|EEJ75257.1| formamidopyrimidine-DNA glycosylase Fpg [Lactobacillus acidophilus ATCC 4796] Length = 276 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L+ ++K T+ + L + F GKKII + R AKYL Sbjct: 1 MPEMPEVETVRRTLLPLIKGKTIEKVVLWYPTIVATDHDEFLKELPGKKIIGIDRYAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H+HV T+ T + YND R Sbjct: 61 LIRLSDNLTIVSHLRMEGKYHLTTEDAPKD----KHDHVEFVFTDKT-----ALRYNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + Q ++ LGPEP + F+ YL KK+ N+KN LL+Q VAG+ Sbjct: 112 KFGRMQLIITGTERQVTGIKKLGPEPNTSEFSQQYLIDNLKKKHKNIKNVLLDQTTVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L N P + L + I + + AI+ G+++ Y+ Sbjct: 172 GNIYVDETLWQSKIHP------LSIANKIPAKKVAGLWENINQTIALAIEKRGTTVHSYL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G +G +Q VYG GE C CG + +I +GR T +C +CQ Sbjct: 226 DANGEVGGYQEMLQVYGHVGEEC-PRCGNIFEKIKVSGRGTTFCPHCQ 272 >gi|163853444|ref|YP_001641487.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] gi|229541074|sp|A9W8R7|FPG_METEP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163665049|gb|ABY32416.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens PA1] Length = 299 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|301169670|emb|CBW29271.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus influenzae 10810] Length = 271 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 154/289 (53%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I + A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQNSAID----KHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|254563373|ref|YP_003070468.1| formamidopyrimidine-DNA glycosylase [Methylobacterium extorquens DM4] gi|254270651|emb|CAX26655.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Methylobacterium extorquens DM4] Length = 299 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 126/299 (42%), Positives = 171/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPRLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|307294070|ref|ZP_07573914.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] gi|306880221|gb|EFN11438.1| formamidopyrimidine-DNA glycosylase [Sphingobium chlorophenolicum L-1] Length = 270 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 159/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLEGAVLTRVEARRADLRFPIPVDLRQRLTGATVTALSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ P + H+H+ I + NDPR Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRID------PAEIGAHDHLLIE-----TGGGRLLSLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + Y P +GPEP F L K +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRSEAWEAYSPFTRMGPEPLGPDFTPDTLAAALKGKATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R+ + + L L++ I+ VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTREAGKIGRAR------LILLVEAIRDVLAAAIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC +CG IRR V GRSTF+C CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPC--HCGTPIRRRVDGGRSTFFCPKCQK 270 >gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 273 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVTTPPDEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTIMSHLRMEGKFRLMD----EKDEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP N+F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGENETRSIKKLGPEPLTNTFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + ++ + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVQPERPANSLSNKE------IKRIFEATISIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKTGEPC+ CG I +I GR T +C +CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTGEPCV-VCGTPIEKIKLNGRGTHFCPHCQK 273 >gi|148828123|ref|YP_001292876.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittGG] gi|166215626|sp|A5UI87|FPG_HAEIG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148719365|gb|ABR00493.1| hypothetical protein CGSHiGG_08295 [Haemophilus influenzae PittGG] Length = 271 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N Y L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CYSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|15640251|ref|NP_229878.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586313|ref|ZP_01676102.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121729455|ref|ZP_01682084.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|147674090|ref|YP_001218481.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|153820030|ref|ZP_01972697.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|153821781|ref|ZP_01974448.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|227080441|ref|YP_002808992.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|229506978|ref|ZP_04396486.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229509348|ref|ZP_04398831.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229516295|ref|ZP_04405743.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229606486|ref|YP_002877134.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254851351|ref|ZP_05240701.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255744033|ref|ZP_05417987.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262161924|ref|ZP_06030941.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|262168066|ref|ZP_06035765.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|298500863|ref|ZP_07010665.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] gi|21362548|sp|Q9KVC5|FPG_VIBCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|172047483|sp|A5F407|FPG_VIBC3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789454|sp|C3LQI3|FPG_VIBCM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9654629|gb|AAF93397.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549433|gb|EAX59461.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae 2740-80] gi|121628630|gb|EAX61105.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae V52] gi|126509434|gb|EAZ72028.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae NCTC 8457] gi|126520677|gb|EAZ77900.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|146315973|gb|ABQ20512.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|227008329|gb|ACP04541.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae M66-2] gi|227012068|gb|ACP08278.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae O395] gi|229346721|gb|EEO11691.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC9] gi|229353663|gb|EEO18600.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae B33] gi|229356083|gb|EEO21002.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae BX 330286] gi|229369141|gb|ACQ59564.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MJ-1236] gi|254847056|gb|EET25470.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MO10] gi|255738298|gb|EET93689.1| formamidopyrimidine-DNA glycosylase [Vibrio cholera CIRS 101] gi|262023599|gb|EEY42301.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae RC27] gi|262028302|gb|EEY46958.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae INDRE 91/1] gi|297540367|gb|EFH76426.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae MAK 757] Length = 269 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPLCEQKIAQRNTFFCPQCQ 268 >gi|291485341|dbj|BAI86416.1| formamidopyrimidine-DNA glycosylase [Bacillus subtilis subsp. natto BEST195] Length = 278 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L ++K T+ + + N+ R P F+ G+ I + RR K+ Sbjct: 4 PELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGKF 63 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ ++ HL M G + + + +H HV ++T+ T + Y D Sbjct: 64 LLFHLDH-YVMVSHLRMEGKYGLHQAEEP----DDKHVHVIFTMTDGTQLR-----YRDV 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L + + PL LGPEP F + YL + K N +K ALL+QK V G Sbjct: 114 RKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+RA + P K L + L I+ L +AIDAGGS++R Y Sbjct: 174 LGNIYVDEALFRAGVHPETKANQLSDK------TIKTLHAGIKNTLQEAIDAGGSTVRSY 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G IG FQ VYGK EPC NCG MI +IV GR T +C CQ Sbjct: 228 INSQGEIGMFQLQHFVYGKKDEPC-KNCGTMISKIVVGGRGTHFCAKCQ 275 >gi|170750114|ref|YP_001756374.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] gi|238688767|sp|B1LWY6|FPG_METRJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170656636|gb|ACB25691.1| formamidopyrimidine-DNA glycosylase [Methylobacterium radiotolerans JCM 2831] Length = 296 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 168/299 (56%), Gaps = 17/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R NLRF FP F+A G+ + ++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPALVGARFSRVTLRRANLRFPFPERFAARLEGRTVTGLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ ++++HLGMSG F + + P+H+HV ++++ Sbjct: 61 TAALDSGETLVMHLGMSGRFDVALPDGSNLSPGDFYLEGAQGTPKHDHVVMAMSTGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV ++ +G EP D + F K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVPSAELAACRHFARMGVEPLD-GLTGAVIARLFRHKIAPLKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P SL + +G P L + I +VL +A+ Sbjct: 175 LLDQRLIAGLGNIYVCEALHRARLHPEAPAGSLARPDGRPTPEANALAKAIVQVLEEAVK 234 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DGS G FQ+AF VY + G PC C I RIVQA RSTF+C CQ Sbjct: 235 AGGSTLRDYAHTDGSAGAFQHAFRVYDRVGLPCSRPGCAGAITRIVQANRSTFFCATCQ 293 >gi|196040881|ref|ZP_03108179.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|229093682|ref|ZP_04224781.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] gi|196028335|gb|EDX66944.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus NVH0597-99] gi|228689567|gb|EEL43375.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-42] Length = 276 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIKNIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLHERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|307706468|ref|ZP_07643277.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] gi|307618178|gb|EFN97336.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis SK321] Length = 274 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDLDQFQKELPGQVVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + + HL M G + + +H H+ + ++Y D R Sbjct: 61 LFYLT-DKVLTSHLRMEGKYFYYPDQ----VPERKHAHIFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDVQVFQAALTKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + +I VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQIIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTIIEKIQLGGRGTHFCPQCQR 272 >gi|228993313|ref|ZP_04153229.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] gi|228766381|gb|EEM15024.1| Formamidopyrimidine-DNA glycosylase [Bacillus pseudomycoides DSM 12442] Length = 276 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + L R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIQDVIVTYPKLVKRPDDAELFKEMLRGEKIERIERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + I+ HL M G +++ +H HV T+ T + Y D Sbjct: 61 FLLLYVTK-YVIVSHLRMEGKYLLHKDDEPVD----KHTHVRFQFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKRGEEFDQMPLADLGPEPFDAELTVGYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + K+ L +A++ GGS++R Sbjct: 171 GLGNIYVDEVLFRSGIHPEREASSLTKAE------IEKIHAATVATLAEAVERGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYG+ GEPC++ CG +I + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGRKGEPCVT-CGNVIEKTVVGGRGTHYCPMCQ 273 >gi|256823439|ref|YP_003147402.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] gi|256796978|gb|ACV27634.1| formamidopyrimidine-DNA glycosylase [Kangiella koreensis DSM 16069] Length = 269 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 144/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + +T + +++ LR+ + G D+ RRAKY+ Sbjct: 1 MPELPEVETTKNGLAPHIVGKRITAVNIYQPQLRWPVAEE-ATTLVGLVSSDIERRAKYM 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L S+++HLGMSG+ + A +H+H + + T + +NDPR Sbjct: 60 LWHFSTG-SLVMHLGMSGTMRVVSAQSALK----KHDHFEVVFDDRT-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP + F+ YL K+ +KNA+++ K+V G+ Sbjct: 110 RFGAILWQPKGETLKV--LSQLGPEPLSDDFDGQYLHQALTKRKGAIKNAVMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P R + L I+ VL AI GG++L+D+ Sbjct: 168 GNIYASESLFMSGIHPKRAANKVSLAR------CKLLAGFIKTVLEKAIGEGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYF +VYG+ PC CG +I++ V RS+FYC CQ+ Sbjct: 222 QTDGSPGYFAQQLNVYGRADLPCN-QCGAIIKKQVIGQRSSFYCPKCQR 269 >gi|229521061|ref|ZP_04410482.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] gi|229341946|gb|EEO06947.1| formamidopyrimidine-DNA glycosylase [Vibrio cholerae TM 11079-80] Length = 269 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 146/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+ I+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + + + R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAARHDHVDLVMASGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++L P+R SL L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRLHPLRPAHSLSLEE------WQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC +CG+ I A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PHCGEPICEQKIAQRNTFFCPQCQ 268 >gi|242237621|ref|YP_002985802.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] gi|242129678|gb|ACS83980.1| formamidopyrimidine-DNA glycosylase [Dickeya dadantii Ech703] Length = 269 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHTILYAEVRNARLRWPVSPEILS-LSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL +IVHLGMSGS + + I+ +H+HV + L + + Y DPR Sbjct: 60 LIELTSG-WMIVHLGMSGSLRV----LPEYIEPDKHDHVDLVLDSGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + P L LG EP +F YL Q + + +K +++ K+V G+ Sbjct: 110 RFGA--WLWSPDPSTSPVLAHLGLEPLGAAFTGEYLFSQSRGRKTPVKLWIMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL + ++L+ I+ VL +I+ GG++LRD++ Sbjct: 168 GNIYASESLFGAGILPDRPAGSLSEQEA------HRLVATIRAVLQRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF A VYG+TGEPC CG + + Q RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQALQVYGRTGEPC-RQCGTPVESVKQGQRSTFFCRHCQ 268 >gi|116333678|ref|YP_795205.1| formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] gi|116099025|gb|ABJ64174.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] Length = 286 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ T+ + + + F+A +KI + RR KYL Sbjct: 1 MPELPEVETVRRGLTRLVQGATIAHVEVRYPKMVTPDADVFTAELISRKIERIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G+L+++ HL M G + ++ +H HV LT+N + Y D R Sbjct: 61 LFRFSGDLTMVSHLRMEGKYDVQPEGSP----VSKHTHVIFHLTDNRELR-----YTDTR 111 Query: 121 RFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M LV T + P L LGPEP + Y+ F K + +K LL+Q +AG Sbjct: 112 KFGRMQLVPTGEETTLAPSLGKLGPEPTAETLTLAYMVKIFGKSHKVVKPFLLDQTRIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E LW +K++P+ +L + L +L Q I + AI G+++ + Sbjct: 172 LGNIYADEVLWLSKINPLTPVDTLTPSQ------LSELRQNIIDEMALAIGGHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VYG+ GEPC CG + +I A R T +C +CQ Sbjct: 226 STAFGEAGQFQNQLHVYGREGEPC-ERCGTELVKIKVAQRGTHFCPHCQ 273 >gi|126664537|ref|ZP_01735521.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] gi|126630863|gb|EBA01477.1| formamidopyrimidine-DNA glycosylase [Marinobacter sp. ELB17] Length = 270 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 158/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ TV + + LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQTVRSVGVRNGRLRWPVPEDLAVRLEGEVIRSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ S+IVHLGMSGS I A H+HV ++L R+ YNDPR Sbjct: 61 FLNLDSG-SVIVHLGMSGSLRIITDDSAALT----HDHVELTL-----HSGVRLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +S +P + +LGPEP FN YL + K++ +K+ +++ +V G+ Sbjct: 111 RFGC--WLWSSNPSTHPLIASLGPEPLAPEFNGAYLFRRSRGKSTAVKSFIMDGHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + ++L++ IQ+ L AI GG++LRD+V Sbjct: 169 GNIYANEALFGAGIHPRRQAGRISLSR------YHRLVEVIQETLTAAILMGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF + VYG+ G+PC C +R I R+T YCT CQ+ Sbjct: 223 NSDGQPGYFAQSLLVYGRGGQPC-PECQAKLREIRMNQRATVYCTRCQR 270 >gi|145632333|ref|ZP_01788068.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145634123|ref|ZP_01789834.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] gi|144987240|gb|EDJ93770.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 3655] gi|145268567|gb|EDK08560.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittAA] Length = 271 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQYSAID----KHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|329122967|ref|ZP_08251538.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] gi|327471898|gb|EGF17338.1| DNA-formamidopyrimidine glycosylase [Haemophilus aegyptius ATCC 11116] Length = 274 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 4 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 63 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 113 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 171 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 225 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 272 >gi|145628119|ref|ZP_01783920.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|145630040|ref|ZP_01785822.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145640614|ref|ZP_01796197.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|319775119|ref|YP_004137607.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] gi|144979894|gb|EDJ89553.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144984321|gb|EDJ91744.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145274540|gb|EDK14403.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] gi|317449710|emb|CBY85917.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3047] Length = 271 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|206977170|ref|ZP_03238069.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|222098047|ref|YP_002532104.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228987833|ref|ZP_04147942.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141311|ref|ZP_04269849.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|229198734|ref|ZP_04325432.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|206744655|gb|EDZ56063.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus H3081.97] gi|221242105|gb|ACM14815.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus Q1] gi|228584756|gb|EEK42876.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1293] gi|228642092|gb|EEK98385.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST26] gi|228771881|gb|EEM20338.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 276 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|42783763|ref|NP_981010.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] gi|81699643|sp|Q72ZF1|FPG_BACC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42739693|gb|AAS43618.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10987] Length = 276 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAKIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|163790756|ref|ZP_02185182.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] gi|159873936|gb|EDP68014.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. AT7] Length = 279 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ + ++ + F G+KI RR K Sbjct: 1 MPELPEVETVRKGLEKLVLGATIKSVDVYWDRIIAGSIESTEFKQLLIGEKITGFDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++ N +++ HL M G + +E ++ + +H HV L + + + Y D Sbjct: 61 YIVFHF-KNWALVSHLRMEGKYEVEEST----VPLKKHTHVVFHLADGRDLR-----YLD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV +Y +R LGPEP +F+ + K +K LL+QKIVA Sbjct: 111 VRKFGRMTLVPLGEEYSMTGIRLLGPEPTKEAFDETTFFNTLLTKKRAIKPLLLDQKIVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ AK+ P+R SL K + +L + I KVL DA+ AGG+++R Sbjct: 171 GLGNIYVDEALFAAKIHPLRMANSL------KKQEVSQLHEAIIKVLGDAVKAGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G G FQ SVYGK G PC+ CG I +I A R T +C +CQ Sbjct: 225 YQNALGEAGKFQVKLSVYGKKGIPCI-RCGTPIEKIKVAQRGTHFCPHCQ 273 >gi|47564996|ref|ZP_00236039.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] gi|47557782|gb|EAL16107.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9241] Length = 276 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATITTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|30022661|ref|NP_834292.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218232074|ref|YP_002369382.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus B4264] gi|229048293|ref|ZP_04193861.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|229072088|ref|ZP_04205297.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|229081838|ref|ZP_04214330.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|229112051|ref|ZP_04241594.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|229129870|ref|ZP_04258836.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|229147146|ref|ZP_04275504.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|229152781|ref|ZP_04280964.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|296505058|ref|YP_003666758.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] gi|39931253|sp|Q817G5|FPG_BACCR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29898219|gb|AAP11493.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 14579] gi|218160031|gb|ACK60023.1| DNA-formamidopyrimidine glycosylase [Bacillus cereus B4264] gi|228630601|gb|EEK87247.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus m1550] gi|228636256|gb|EEK92728.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST24] gi|228653561|gb|EEL09433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-Cer4] gi|228671374|gb|EEL26675.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-15] gi|228701426|gb|EEL53920.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-2] gi|228711022|gb|EEL62988.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus F65185] gi|228723018|gb|EEL74395.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH676] gi|296326110|gb|ADH09038.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis BMB171] Length = 276 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|320157663|ref|YP_004190042.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] gi|319932975|gb|ADV87839.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus MO6-24/O] Length = 269 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGSA-IVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYVAPGEDHDV--LGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|228923330|ref|ZP_04086618.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836284|gb|EEM81637.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 276 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKETLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|309800253|ref|ZP_07694429.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] gi|308116106|gb|EFO53606.1| formamidopyrimidine-DNA glycosylase [Streptococcus infantis SK1302] Length = 274 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+++ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKIASLDIRYPKMIKTDLDQFQKELHGQELQSMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G ++ + +H HV I + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYLYYPDQ----VPERKHAHVLIHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPELLEAYFLSKKLGPEPTEQDFDLEIFRGALKKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL KL + +VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAKVHPARTSNSLSAQEA------RKLHDQTIEVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQAC-SRCGSIIEKIQLGGRGTHFCPKCQR 272 >gi|68249533|ref|YP_248645.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] gi|81336040|sp|Q4QLW2|FPG_HAEI8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68057732|gb|AAX87985.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 86-028NP] Length = 271 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRKPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|329891039|ref|ZP_08269382.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] gi|328846340|gb|EGF95904.1| formamidopyrimidine-DNA glycosylase [Brevundimonas diminuta ATCC 11568] Length = 287 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 123/294 (41%), Positives = 174/294 (59%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T +R +LRF FP F G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLEGARLTAPRQNRPDLRFPFPERFIERLEGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L L + + HLGM+G F +E + + +H H +SLT + + R+ Y Sbjct: 61 LFPLSTGETWVTHLGMTGRFTLEGVAPGVFETDAPVIGKHEH--MSLTADRDGALTRLGY 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D RRFGFM L+ T + LGPEP N+F+ +L F K N+K +LL+Q I Sbjct: 119 ADARRFGFMGLIPTEAVEGHAWFAKLGPEPLGNAFSGAHLAEAFAGKAQNIKVSLLDQSI 178 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP+ + + L +L E++ VL DAI AGGS+L Sbjct: 179 VAGLGNIYVCEALYRARISPLTAAGEISRPR------LERLAAEVRNVLGDAIAAGGSTL 232 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 +D+ +++G GYFQ+ F VYG+ EPC + C +++RI Q GRSTF+C CQK Sbjct: 233 KDFANVEGGQGYFQHRFDVYGREHEPCRTEGCRGVVKRIAQGGRSTFFCPLCQK 286 >gi|297529111|ref|YP_003670386.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] gi|297252363|gb|ADI25809.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. C56-T3] Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ P F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDPEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R+ SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRQAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|33151884|ref|NP_873237.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] gi|39931237|sp|Q7VN67|FPG_HAEDU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33148105|gb|AAP95626.1| formamidopyrimidine-DNA glycosylase [Haemophilus ducreyi 35000HP] Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 149/288 (51%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + T+ I + LR+ A G KI+ +SRRAKYL Sbjct: 1 MPELPEVETCLRGIEPYLAGQTIQQIVIRTPKLRWPISAELCA-MSGAKILALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E ++ HLGMSGS + ++S +P K +H+HV + + YNDPR Sbjct: 60 IIHTERGDILV-HLGMSGSLTLLNSS--QPTKASKHDHVDLITEAG-----IILRYNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + YP + LGPEP ++F + YL + K +KN ++N IV G+ Sbjct: 112 KFGA--WLWAKQAENYPLITKLGPEPLSDTFTSDYLFKKSRNKTVAVKNFIMNNDIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P ++L + +L IQ VL AI GG++L+D+ Sbjct: 170 GNIYASESLFMAGVHPELAAQNLTEKQ------CVQLRNVIQAVLTKAIIQGGTTLKDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CG +I+ V R++++C CQ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEEC-RECGTLIQAKVIGQRNSYFCPDCQ 270 >gi|284008829|emb|CBA75606.1| formamidopyrimidine-DNA glycosylase [Arsenophonus nasoniae] Length = 269 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGNKIQYSIVRNSQLRWPVATEILH-IANESVLSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ II+HLGMSGS I AK +H+H+ + L + + Y DPR Sbjct: 60 LIQLQHG-WIIIHLGMSGSIRI----LAKEQLAEKHDHIDLVLADGKTLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ P L LGPEP FNA YL + K + +K L++ KIV G+ Sbjct: 110 RFGA--WLWTNDLDNCPVLFHLGPEPLSTDFNADYLYQRAKNKKTAIKPWLMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK+ P R SL + + L+ +I+++L +I GG +L+D++ Sbjct: 168 GNIYANEALFAAKILPTRAAHSLTRKE------IDNLVIQIKQILQCSIKQGGITLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GE C CGQ+I I RSTF+C CQK Sbjct: 222 QSDGKPGYFAQQLFVYGKKGEACSH-CGQLIESIKLGQRSTFFCYNCQK 269 >gi|167856318|ref|ZP_02479048.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219871061|ref|YP_002475436.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] gi|254789440|sp|B8F586|FPG_HAEPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167852548|gb|EDS23832.1| Formamidopyrimidine-DNA glycosylase [Haemophilus parasuis 29755] gi|219691265|gb|ACL32488.1| formamidopyrimidine-DNA glycosylase [Haemophilus parasuis SH0165] Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + +I + + LR+ S +G II++ RRAKYL Sbjct: 1 MPELPEVETSMRGISPYLVGQKIKEIIVRQPKLRWAVSSELST-MQGATIIEIYRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + ++ HLGMSGS I K I +H+H+ + N + YNDPR Sbjct: 60 IIQTDKGDILV-HLGMSGSLGILSVKENKAID--KHDHIDLITENGVILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG E + + L LGPEP +F + YL + K +KN ++N IV G+ Sbjct: 112 KFGTWLWAEQAETAE--LLANLGPEPLSEAFTSGYLFEKSRNKTVAVKNFIMNNAIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L +L+ I++VL AI GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTAKQ------CERLVTVIKEVLTKAIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C +CG +I V R++FYC CQ+ Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEECN-DCGSIIEAKVIGQRNSFYCPKCQR 271 >gi|262172686|ref|ZP_06040364.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] gi|261893762|gb|EEY39748.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus MB-451] Length = 269 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPSEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLS------LDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKLGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|258542328|ref|YP_003187761.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256633406|dbj|BAH99381.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01] gi|256636465|dbj|BAI02434.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-03] gi|256639518|dbj|BAI05480.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-07] gi|256642574|dbj|BAI08529.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-22] gi|256645629|dbj|BAI11577.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-26] gi|256648682|dbj|BAI14623.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-32] gi|256651735|dbj|BAI17669.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654726|dbj|BAI20653.1| formamidopyrimidine-DNA glycosylase [Acetobacter pasteurianus IFO 3283-12] Length = 279 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 124/293 (42%), Positives = 174/293 (59%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS +G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIKGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ + P H HV + L + R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLDSPTEPLP-----HEHVVLILQDGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLVGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P +L KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAPTMPACNLTPPKAC------KLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC + G +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|149019561|ref|ZP_01834880.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] gi|147930936|gb|EDK81916.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP23-BS72] Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|228941765|ref|ZP_04104312.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974689|ref|ZP_04135255.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981283|ref|ZP_04141583.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228778483|gb|EEM26750.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis Bt407] gi|228785092|gb|EEM33105.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817977|gb|EEM64055.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942369|gb|AEA18265.1| formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar chinensis CT-43] Length = 276 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTIEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|319651808|ref|ZP_08005933.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317396460|gb|EFV77173.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + F A G+ D+ RR K Sbjct: 1 MPELPEVETVRRTLQELVIGKTIAHVSVFWPKMVKHPEELVQFKDALAGQIFQDIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L++ + +++ HL M G + + K +H HV T+ T + Y D Sbjct: 61 FLILYT-IDYALVSHLRMEGRYGLF----LKEEPVDKHTHVIFHFTDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +++ PL LGPEP F A L + + N+K ALL+QK + Sbjct: 111 VRKFGTMHLYAKGEEFKTLPLAHLGPEPFGEEFTAEDLAARLARTTRNIKTALLDQKTIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+R+++ P R SL ++ L L +EI L +A+D GGS++R Sbjct: 171 GLGNIYVDEALFRSRIHPERAANSLTKSE------LETLHKEIADTLREAVDKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G IG FQ VYG+ GE C CG + RIV GR T YC CQK Sbjct: 225 YVNSQGQIGMFQLELYVYGRKGEDC-KVCGSTLERIVTGGRGTVYCPACQK 274 >gi|218532304|ref|YP_002423120.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] gi|254789442|sp|B7KN75|FPG_METC4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218524607|gb|ACK85192.1| formamidopyrimidine-DNA glycosylase [Methylobacterium chloromethanicum CM4] Length = 299 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 170/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M V + L R NLRF FP F+ G +++++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARVARVTLRRPNLRFPFPERFAERLEGTTVLELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRLPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T ++G EP ++ +A L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFASMGVEPLSDALDAPLLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G+P L++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGSPAPKAKTLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C + RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRVGRIVQGGRSTFFCETCQ 294 >gi|307703776|ref|ZP_07640717.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] gi|307622611|gb|EFO01607.1| formamidopyrimidine-DNA glycosylase [Streptococcus oralis ATCC 35037] Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSVEITYPKMIKTDLDEFQKEVSGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV I + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFIRFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 272 >gi|21730608|pdb|1L1T|A Chain A, Mutm (Fpg) Bound To Abasic-Site Containing Dna gi|21730611|pdb|1L1Z|A Chain A, Mutm (Fpg) Covalent-Dna Intermediate gi|21730614|pdb|1L2B|A Chain A, Mutm (Fpg) Dna End-Product Structure gi|21730618|pdb|1L2C|A Chain A, Mutm (Fpg)-Dna Estranged Thymine Mismatch Recognition Complex gi|21730621|pdb|1L2D|A Chain A, Mutm (Fpg)-Dna Estranged Guanine Mismatch Recognition Complex Length = 274 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|253752113|ref|YP_003025254.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|253753938|ref|YP_003027079.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|253755187|ref|YP_003028327.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251816402|emb|CAZ52033.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis SC84] gi|251817651|emb|CAZ55399.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis BM407] gi|251820184|emb|CAR46549.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis P1/7] gi|319758489|gb|ADV70431.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis JS14] Length = 275 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 145/288 (50%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L + +I HL M G + A + +H H + + + ++Y D R Sbjct: 61 LIYLTDH-VLISHLRMEGKYNFF----ADQVPANKHFHAFFTFIDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L D + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQLS------TDQVADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437] Length = 274 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ TV ++ + + P F +G+K+ V RR K Sbjct: 1 MPELPEVETVKRTLQKLITGKTVEEVKVSLPRILQEPPDPQLFGEMLKGRKVTGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I + ++ HL M G + +E +H HV T+ T + Y D Sbjct: 61 FLRIFFD-PWVLVSHLRMEGRYSLESAETP----VAKHTHVIFRFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PPLR LGPEP +F K+ +N+K LLNQ+ + Sbjct: 111 VRQFGTMHLWPKGEELNLPPLRKLGPEPLSEAFTLAGFAAGLAKRKTNIKALLLNQEFLC 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P R+ +SL D + +L + I+ L+ A++AGGSS+R Sbjct: 171 GLGNIYVDEALFTAGIHPERRVQSLD------SDEVKRLYKSIRSTLVKAVEAGGSSVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G +G FQ VYG+ GEPCL CG I R V AGR T +C CQ+ Sbjct: 225 YVDGNGEMGMFQLQIQVYGRKGEPCLH-CGHPIERRVVAGRGTHFCPECQQ 274 >gi|225854474|ref|YP_002735986.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] gi|225723258|gb|ACO19111.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae JJA] Length = 274 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQYALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|229175294|ref|ZP_04302809.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] gi|228608126|gb|EEK65433.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus MM3] Length = 276 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|197286978|ref|YP_002152850.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|238690077|sp|B4F0X6|FPG_PROMH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194684465|emb|CAR46215.1| formamidopyrimidine-DNA glycosylase [Proteus mirabilis HI4320] gi|301072215|gb|ADK56069.1| Fpg [Proteus mirabilis] gi|301072237|gb|ADK56090.1| Fpg [Proteus mirabilis] gi|312598039|gb|ADQ89973.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] gi|312598060|gb|ADQ89993.1| formamidopyrimidine DNA-glycosylase [Proteus mirabilis] Length = 274 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 142/288 (49%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + +H+H+ + + + Y DPR Sbjct: 60 LIELNQG-WIIVHLGMSGSVRI----LPEEQPEEKHDHIDLVFRDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP FNA YL Q K +K L++ K+V G+ Sbjct: 110 RFGAWLWCED--LATSSVLAHLGPEPLSAQFNAQYLYQQSKNKKIAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P RK SL + L+ I+ VL +I+ GG++L+D++ Sbjct: 168 GNIYANEALFSSGIMPDRKASSLTEQECDV------LVNAIKTVLTRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 268 >gi|75762013|ref|ZP_00741927.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899739|ref|YP_002448150.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228903103|ref|ZP_04067239.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] gi|228910410|ref|ZP_04074225.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|74490499|gb|EAO53801.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542389|gb|ACK94783.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus G9842] gi|228849176|gb|EEM94015.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 200] gi|228856512|gb|EEN01036.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis IBL 4222] Length = 276 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|148826404|ref|YP_001291157.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|166215625|sp|A5UDC3|FPG_HAEIE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148716564|gb|ABQ98774.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE] gi|309973552|gb|ADO96753.1| Formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R2846] Length = 271 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I + A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQNSAID----KHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTLNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|307246928|ref|ZP_07528993.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255910|ref|ZP_07537711.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260363|ref|ZP_07542070.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852213|gb|EFM84453.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861178|gb|EFM93171.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865614|gb|EFM97495.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 273 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|257898349|ref|ZP_05678002.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] gi|257836261|gb|EEV61335.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com15] Length = 278 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPLFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLCPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|322391813|ref|ZP_08065278.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] gi|321145293|gb|EFX40689.1| DNA-formamidopyrimidine glycosylase [Streptococcus peroris ATCC 700780] Length = 274 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKIDLYEFKRELPGQVIQSMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + +I HL M G + + +H H+ I T+ ++Y D R Sbjct: 61 IFYLS-DKVLISHLRMEGKYFYYPDQ----VPERKHAHLFIQFTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPELLETYFLSKKLGPEPTEQDFDLPTFQKALQKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL K+ E KVL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAKIHPSRLSNSLTAQEA------RKVHDETIKVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S CG MI +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQEFHQVYDKAGQEC-SRCGAMIEKIQLGGRGTHFCPTCQR 272 >gi|229843992|ref|ZP_04464133.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] gi|229812986|gb|EEP48674.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 6P18H1] Length = 271 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEELIT-LKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVINNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIGQRNSFFCPKCQK 269 >gi|260877863|ref|ZP_05890218.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] gi|308089909|gb|EFO39604.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AN-5034] Length = 269 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|169833803|ref|YP_001694415.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] gi|168996305|gb|ACA36917.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Hungary19A-6] Length = 285 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 12 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 72 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 121 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 122 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 182 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GRST +C CQ+ Sbjct: 236 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRSTHFCPNCQR 283 >gi|257884460|ref|ZP_05664113.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257887243|ref|ZP_05666896.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|293377606|ref|ZP_06623795.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] gi|293571801|ref|ZP_06682817.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|257820298|gb|EEV47446.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,501] gi|257823297|gb|EEV50229.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,141,733] gi|291608055|gb|EFF37361.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E980] gi|292643606|gb|EFF61727.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecium PC4.1] Length = 278 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFAAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|229163578|ref|ZP_04291527.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] gi|228619828|gb|EEK76705.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus R309803] Length = 276 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+ I +V RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVVVTYPKIVKRPDDAEIFKEMLKGETIENVKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPKYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|15902916|ref|NP_358466.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116515925|ref|YP_816340.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|148988414|ref|ZP_01819861.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|168491059|ref|ZP_02715202.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225858763|ref|YP_002740273.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|29611712|sp|Q8DQ33|FPG_STRR6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15458476|gb|AAK99676.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae R6] gi|116076501|gb|ABJ54221.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae D39] gi|147926095|gb|EDK77169.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP6-BS73] gi|183574637|gb|EDT95165.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC0288-04] gi|225720028|gb|ACO15882.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 70585] gi|332076244|gb|EGI86710.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41301] Length = 274 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|206969738|ref|ZP_03230692.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|229180905|ref|ZP_04308240.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] gi|229192787|ref|ZP_04319745.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|206735426|gb|EDZ52594.1| formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1134] gi|228590626|gb|EEK48487.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus ATCC 10876] gi|228602462|gb|EEK59948.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus 172560W] Length = 276 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTTQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLSEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|16272883|ref|NP_439106.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae Rd KW20] gi|260580035|ref|ZP_05847865.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] gi|1169727|sp|P44948|FPG_HAEIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1573970|gb|AAC22606.1| formamidopyrimidine-DNA glycosylase (fpg) [Haemophilus influenzae Rd KW20] gi|260093319|gb|EEW77252.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae RdAW] Length = 271 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYTNESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|325577757|ref|ZP_08148032.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] gi|325160502|gb|EGC72628.1| DNA-formamidopyrimidine glycosylase [Haemophilus parainfluenzae ATCC 33392] Length = 271 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + KI+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTT-LKNVKILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPHDSPID----KHDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + KK++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTESLDDFHLFLKLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPMKLAENLTRKQ------CALLVKTIKDVLAKAITQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++FYC +CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGTKIESMIIGQRNSFYCPHCQK 269 >gi|293365237|ref|ZP_06611954.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] gi|291316687|gb|EFE57123.1| DNA-formamidopyrimidine glycosylase [Streptococcus oralis ATCC 35037] Length = 288 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ + + + F G+ I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKKISSVEITYPKMIKTDLDEFQKEVSGQVIESMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV I + ++Y D R Sbjct: 75 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFIRFEDGGT-----LVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP D F+ K +K+ LL+Q +VAG+ Sbjct: 125 KFGTMELLVHELLDAYFVSKKLGPEPRDQDFDLQSFQAALAKSKKPIKSHLLDQTLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLWRAQVHPARPSQTLTAEEAL------AIHDQTIAVLGQAVEKGGSTIRTYT 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 239 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTVIEKFQLGGRGTHFCPQCQR 286 >gi|58579922|ref|YP_198938.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424516|gb|AAW73553.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 316 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 46 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 105 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 106 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQNGRVLR-----FNDPR 156 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL + + + +K L++Q +V G+ Sbjct: 157 RFGC--LLWQSDIQAHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVVGV 214 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A +SP+R+ + D +L ++ +L AI GG++LRD++ Sbjct: 215 GNIYAAESLHCAGISPLREAGKVS------LDRYRRLAAAVKDILSYAIRRGGTTLRDFI 268 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 269 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 316 >gi|307127479|ref|YP_003879510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] gi|306484541|gb|ADM91410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae 670-6B] Length = 274 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|163797306|ref|ZP_02191259.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] gi|159177397|gb|EDP61953.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium BAL199] Length = 276 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 163/290 (56%), Gaps = 15/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LR+ P F+ G+++I + RRAKY+ Sbjct: 1 MPELPEVETVMRGLTPRLEGRILAHVEARRPDLRWPLPDGFAGRLMGRRVIGLRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ ++HLGMSG ++ + +H+HV + + +ND R Sbjct: 61 LVDLDDGTCWMIHLGMSGRMLLSNDGDPAFQ---KHDHVVLRTDEGWWLR-----FNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T+ + L +GPEP N+F+A L + + +K ALL+Q++VAGI Sbjct: 113 RFGMMDLWPTADVENHRLLSGIGPEPLGNAFSASALETALEGRQTTIKAALLDQRVVAGI 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL R+ ++P R ++ L+ I VL DAI AGGSSLRD+ Sbjct: 173 GNIYACEALHRSGIAPKRLALNVRGARA------EALVSAIGAVLTDAIAAGGSSLRDHR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ+AF VY + G+ C C ++RIVQ GRSTFYC CQ+ Sbjct: 227 QTSGELGYFQHAFGVYDREGQSCPKEGCQGTVQRIVQTGRSTFYCPSCQR 276 >gi|229135421|ref|ZP_04264208.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] gi|228647982|gb|EEL04030.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus BDRD-ST196] Length = 276 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL K+ + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLT------KEEVERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|221199989|ref|ZP_03573032.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] gi|221180228|gb|EEE12632.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2M] Length = 305 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 91 LFEVDAGWF-IVHLGMTGTLRVLPAGGVP--VAAKHDHIDWIFDE------FVLRFRDPR 141 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|311031366|ref|ZP_07709456.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. m3-13] Length = 277 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L+ +++ T+ + + + D F G++I+ + RR K Sbjct: 1 MPELPEVETVRKTLVELVQGKTIKQVKVLWPKMIKEPDDAALFEEMLIGQEIVKIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L + ++ HL M G + + +H HV ++T + Y D Sbjct: 61 FLLFYLT-DYCMVSHLRMEGKYGLFQKEEPAN----KHTHVFFYFEDDTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L + + L +LGPEP ++ FN L + K N N+K LL+Q +V Sbjct: 111 VRKFGTLHLYKKGEELAAKSLASLGPEPFEDEFNLDLLKERLAKTNRNIKAVLLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P R + SL + L +L +EI L +A+D GGS++R Sbjct: 171 GLGNIYVDEALFRAGIHPERISSSLNEKE------LIELQREIVLTLQEAVDKGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G IG FQ VYG+ GEPC CG I + V AGR T C CQ Sbjct: 225 YVNSQGQIGMFQLELFVYGRKGEPC-RKCGHEIEKTVVAGRGTHTCPKCQ 273 >gi|28896963|ref|NP_796568.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|153839968|ref|ZP_01992635.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|260362380|ref|ZP_05775338.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] gi|260897658|ref|ZP_05906154.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|260899588|ref|ZP_05907983.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|31076660|sp|Q87T81|FPG_VIBPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28805171|dbj|BAC58452.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus RIMD 2210633] gi|149746507|gb|EDM57496.1| formamidopyrimidine-DNA glycosylase [Vibrio parahaemolyticus AQ3810] gi|308087494|gb|EFO37189.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus Peru-466] gi|308108775|gb|EFO46315.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus AQ4037] gi|308115128|gb|EFO52668.1| DNA-formamidopyrimidine glycosylase [Vibrio parahaemolyticus K5030] Length = 269 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRNIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIDTDQG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LEHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|302877714|ref|YP_003846278.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] gi|302580503|gb|ADL54514.1| formamidopyrimidine-DNA glycosylase [Gallionella capsiferriformans ES-2] Length = 276 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 115/294 (39%), Positives = 156/294 (53%), Gaps = 23/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + TVT + +LR+ P + + G+ ++ +SRRAKYL Sbjct: 1 MPELPEVETTRRGLAPYLADATVTGVVTRTPSLRWPIPENLNELLNGQPVVSLSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E ++I+HLGMSGS I T A H+H + L N + DPR Sbjct: 61 LLEFRHG-TLILHLGMSGSLRILPTGTAPQ----PHDHFDLLLDNG-----CLMRLRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADN-----SFNAIYLTHQFHKKNSNLKNALLNQK 175 RFG + L +P L LGPEP D+ FNA YL + +K +++ Sbjct: 111 RFGAV-LWHQGNINTHPLLVKLGPEPLDDRDGNCRFNAHYLYQATRGRRVAIKQFIMDSA 169 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IV G+GNIY EAL+ A ++P+ K L KL I+ L +AI AGGS+ Sbjct: 170 IVVGVGNIYASEALFSAGINPLSKAGELSFA------HCEKLADVIRSTLNEAILAGGST 223 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+V+ G+ GYFQ VY + GEPC C I +I Q RS+FYCT+CQK Sbjct: 224 LRDFVNASGNPGYFQQQHWVYSRAGEPC-RICSAPIMQIKQGQRSSFYCTHCQK 276 >gi|188583716|ref|YP_001927161.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] gi|229541075|sp|B1ZGU8|FPG_METPB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|179347214|gb|ACB82626.1| formamidopyrimidine-DNA glycosylase [Methylobacterium populi BJ001] Length = 296 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 166/299 (55%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + L R NLRF FP F+ G + +++RRAKYL Sbjct: 1 MPELPEVETVRRGLAPAMVGARFARVTLRRPNLRFPFPERFAERLEGTTVRELARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----------PQHNHVTISLTNNTNTK 110 L+ S+I+HLGMSG F + + P+H+HV ++ N Sbjct: 61 TAHLDSGESLILHLGMSGRFDVRMPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGAT-- 118 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 V YND RRFGFMDLV T +G EP ++ + L F +K + LK A Sbjct: 119 ---VTYNDARRFGFMDLVATRDLETCRHFAAMGVEPLSDALDGAVLARLFARKITPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL R+ L P +L + +G P KL++EI+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRSGLHPALPAGALAKPDGAPTPKAKKLVKEIKAVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY DG G FQ+ F VY + G C + C I RIVQ GRSTF+C CQ Sbjct: 236 AGGSTLRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQ 294 >gi|319897563|ref|YP_004135760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] gi|317433069|emb|CBY81443.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae F3031] Length = 271 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGVHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|149192220|ref|ZP_01870436.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] gi|148833951|gb|EDL50972.1| formamidopyrimidine-DNA glycosylase [Vibrio shilonii AK1] Length = 269 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + T+ +I + ++ LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLLDETIKEIVVRQRQLRWLIPQEIHQ-LHGQAITSIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + P + +H+HV + L+N + YNDPR Sbjct: 60 LIDTDKGTA-IVHLGMSGSLRV----LENPPEAEKHDHVDLVLSNGKVMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L GPEP F A +++ + K +K ++N V G+ Sbjct: 110 RFGAWLWCAPGE--SHELLANCGPEPLTEEFCADWMSEKARNKRVAVKTFIMNNANVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P + L+ EI++VL AI GG++L+D+ Sbjct: 168 GNIYACESLFSAGIHPTTPAYKVTLTQ------WQLLVSEIKRVLAQAITQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ EPC CG+ I ++ R+TF+C++CQ+ Sbjct: 222 QSDGKPGYFAQELQVYGRANEPC-HQCGEPIEQMKIGQRNTFFCSHCQQ 269 >gi|329113491|ref|ZP_08242272.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] gi|326697316|gb|EGE48976.1| Formamidopyrimidine-DNA glycosylase [Acetobacter pomorum DM001] Length = 279 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 124/293 (42%), Positives = 172/293 (58%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + ++N T+ + + R +LR+ P FS G++I RR KY+ Sbjct: 1 MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIEGRRIEGFRRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G +SII HLGMSG +++ P H H+ + L N R Y DPR Sbjct: 61 LMRLSGGMSIIWHLGMSGRVLLD-----SPTTPLLHEHIVLILQNGK-----RCGYIDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T + YP L +GPEP + F L + +K LL+QK+VAG+ Sbjct: 111 RFGMLDLVPTDQEDTYPLLAGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA ++P +L KL Q I+ VL +AI+AGGSSL+DYV Sbjct: 171 GNIYVCEALFRAGIAPTMPACNLTTPKA------RKLAQAIRDVLEEAIEAGGSSLKDYV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 +G +GYFQ+A+ VYG+TG+PC + G +++I QAGRSTF+C QK Sbjct: 225 RPEGGLGYFQHAWRVYGQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQK 277 >gi|254522802|ref|ZP_05134857.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] gi|219720393|gb|EED38918.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas sp. SKA14] Length = 270 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDTAIGSA-VLHLGMSGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGETHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISR------ERYQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|303251764|ref|ZP_07337935.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249065|ref|ZP_07531072.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307258095|ref|ZP_07539847.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302649194|gb|EFL79379.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854353|gb|EFM86549.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306863458|gb|EFM95389.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 273 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|328471759|gb|EGF42636.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio parahaemolyticus 10329] Length = 269 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ LR+D P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQEL-KLLEGQVIRAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN+ + YNDPR Sbjct: 60 LIETDAG-TAIVHLGMSGSLRVLDAD----FPAAKHDHVDLKLTNSKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++FN+ Y+ + K +K +++ K+V G+ Sbjct: 110 RFGAWLWCAPGESHAV--LDHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+++++ P R+ + L++ I+ L AI+ GG++L+D+ Sbjct: 168 GNIYANESLFKSRILPTRQAGQVTPQEWV------LLVENIKATLKIAINQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK GEPC CG+ ++ + R+TF+C CQ+ Sbjct: 222 QADGKPGYFAQELLVYGKAGEPC-PECGEPLQELKIGQRNTFFCNECQQ 269 >gi|290477292|ref|YP_003470213.1| formamidopyrimidine DNA glycosylase [Xenorhabdus bovienii SS-2004] gi|289176646|emb|CBJ83455.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus bovienii SS-2004] Length = 269 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 144/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLTGNVIQYSEVRNSRLRWPVSEQIMK-LADQPVLSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I +H+HV + + + + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRILLNESP----PEKHDHVDLIMADGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L LGPEP ++F+ YL K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSDNLDECSVLAHLGPEPLSDAFDGEYLYTLSRHKKTVIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL Q Y L I+++L +I+ GG++L+D++ Sbjct: 168 GNIYANEALYVAHILPERPVNSLTQEEA------YLLADTIKQILHRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGELC-PTCGEKIESIKLGQRSTFFCRQCQ 268 >gi|262163760|ref|ZP_06031500.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] gi|262027740|gb|EEY46405.1| formamidopyrimidine-DNA glycosylase [Vibrio mimicus VM223] Length = 269 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + L LR+ P G+KI+ + RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLVGGTIQSLILRTPKLRWPIPQEL-KQLEGQKILAIHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + IVHLGMSGS I +H+HV + +T+ R+ YNDPR Sbjct: 60 IIETAVGSA-IVHLGMSGSLRILDGD----FPAAKHDHVDLVMTSGK-----RLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ L LGPEP +FNA Y+ + K +K +++ V G+ Sbjct: 110 RFGAWLWCAPDESHEV--LGRLGPEPLTEAFNAEYMVDKARNKRIAVKAFIMDNAAVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ +++ P+R SL D L+ I++VL AI GG++L+D+ Sbjct: 168 GNIYANESLFTSRIHPLRPANSLG------LDEWQTLVANIKQVLQVAIKQGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK +PC NCG+ + A R+TF+C CQ Sbjct: 222 QSDGKPGYFAQELQVYGKAKQPC-PNCGEPLCEQKVAQRNTFFCLQCQ 268 >gi|221206856|ref|ZP_03579868.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] gi|221173511|gb|EEE05946.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD2] Length = 300 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 26 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAELAEQLRAREVLAVERRGKYL 85 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 86 LFEVDAGWF-IVHLGMTGTLRVLPAGGVP--VAAKHDHIDWIFDE------FVLRFRDPR 136 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 137 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 196 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 197 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 250 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 251 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 300 >gi|307251263|ref|ZP_07533184.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856779|gb|EFM88914.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 273 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFIAGIHPELAAQNLTEKQS------ERLVKVIKEVLTKAISQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|228960855|ref|ZP_04122488.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798751|gb|EEM45731.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 276 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAEMTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGAILEKTVVGGRGTHYCPICQ 273 >gi|227551618|ref|ZP_03981667.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257895779|ref|ZP_05675432.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] gi|227179295|gb|EEI60267.1| DNA-(apurinic or apyrimidinic site) lyase [Enterococcus faecium TX1330] gi|257832344|gb|EEV58765.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium Com12] Length = 278 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFVAGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------IEQLRLSIIDVLNRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I +I A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKIKVAQRGTHYCPNCQR 273 >gi|27364270|ref|NP_759798.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio vulnificus CMCP6] gi|29611711|sp|Q8DDY4|FPG_VIBVU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|27360388|gb|AAO09325.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus CMCP6] Length = 269 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGSA-IVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP N+F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYAAPGEDHDV--LGNIGPEPLTNAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GEPC CG+ I+ R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEPC-PECGEAIQEQKIGQRNTFYCSYCQ 268 >gi|302024112|ref|ZP_07249323.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05HAS68] gi|330832409|ref|YP_004401234.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] gi|329306632|gb|AEB81048.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis ST3] Length = 275 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K ++ + + + F G++I+DV RR KYL Sbjct: 1 MPELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L + +I HL M G + +H H + ++ + ++Y D R Sbjct: 61 LIYLTDH-VLISHLRMEGKYNFFPDQVPAN----KHFHAFFTFSDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 225 NALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 271 >gi|332202825|gb|EGJ16894.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA41317] Length = 274 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|315612999|ref|ZP_07887910.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] gi|315315109|gb|EFU63150.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis ATCC 49296] Length = 274 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISNIEITYPKMIKTDLKEFQKEVPGQVIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPREQDFDLQVFQAALSKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGAVIEKFQLGGRGTHFCPQCQR 272 >gi|288553688|ref|YP_003425623.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus pseudofirmus OF4] gi|120474|sp|P19210|FPG_BACFI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39475|emb|CAA37877.1| unnamed protein product [Bacillus firmus] gi|288544848|gb|ADC48731.1| formamidopyrimidine-DNA glycosylase [Bacillus pseudofirmus OF4] Length = 274 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ T+ I + N+ + F + I + RR K Sbjct: 1 MPELPEVETVKRTLTELVIGKTIAGITVKWANIIKEPADVLEFETLLMNQTIRSIRRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL E + ++ ++ HL M G + + K P H HV T+ + Y D Sbjct: 61 FLLFEFD-DIVMVSHLRMEGRYGLY----EKEEPLPPHTHVIFHFTDGEELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LG EP F + L + F K N +K ALL+QK V Sbjct: 111 VRKFGTMHLFPKGSEEKVLPLAHLGVEPFSEQFTSELLMNAFQKTNRKIKVALLDQKTVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA++ P R SL K+ + L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRARIHPERLAHSLS------KEEMAVLHKAIVSTLEEAVEMGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ EPC CG I + V GR T +C CQ Sbjct: 225 YVNGQGEMGMFQQKLGVYGRKNEPC-RQCGTDILKTVVGGRGTHFCPNCQ 273 >gi|90023321|ref|YP_529148.1| formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] gi|123395478|sp|Q21EE3|FPG_SACD2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89952921|gb|ABD82936.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Saccharophagus degradans 2-40] Length = 271 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ ++ V + + ++LR+ P + + K + + RR KYL Sbjct: 1 MPELPEVETTRRGILPHLEGKRVKAVSVRNRSLRWPIPADLAQQIQNKTLRTIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +I HLGMSGS I + H+HV I+ + Y DPR Sbjct: 61 LLEFANG-HVIWHLGMSGSLRIIKADEPPMV----HDHVDIAF-----GGNLALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ L LGPEP ++FN+ YL + K++ ++K +++ K+V G+ Sbjct: 111 RFGAV-LWTNEAILEHKLLNHLGPEPLTDAFNSAYLFDKSRKRSQSVKTWIMDSKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P++ L Q EI+ VL AI+ GG++LRD+V Sbjct: 170 GNIYANEALFNSAIHPLKAAGKLSQKQCDIF------CSEIKSVLAKAIEQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ G+ C C + + R+T YCT+CQK Sbjct: 224 GGDGKPGYFAQELNVYGRGGKAC-KKCRKPLTEKKLGQRTTVYCTHCQK 271 >gi|149006353|ref|ZP_01830065.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|168485922|ref|ZP_02710430.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225861143|ref|YP_002742652.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298229554|ref|ZP_06963235.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254477|ref|ZP_06978063.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503020|ref|YP_003724960.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|147762130|gb|EDK69092.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP18-BS74] gi|183570931|gb|EDT91459.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1087-00] gi|225727344|gb|ACO23195.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae Taiwan19F-14] gi|298238615|gb|ADI69746.1| DNA-(apurinic or apyrimidinic site) lyase [Streptococcus pneumoniae TCH8431/19A] gi|327389248|gb|EGE87593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA04375] gi|332075586|gb|EGI86054.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17545] Length = 274 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|229846005|ref|ZP_04466117.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] gi|229811009|gb|EEP46726.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1] Length = 271 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVVNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAKYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLIIGQRNSFFCPKCQK 269 >gi|87198620|ref|YP_495877.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] gi|123490611|sp|Q2GAT0|FPG_NOVAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|87134301|gb|ABD25043.1| DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium aromaticivorans DSM 12444] Length = 270 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 166/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + + ++R +LR FP + A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLATVLDGQVIRRVAVNRADLRRPFPEDLAQALTGARVTGMGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++ HLGMSG + I+ P +H+H+ + + ND R Sbjct: 61 LIHTDRERTMVFHLGMSGRWRID------PEDIGKHDHLVLETGEGRV-----LSLNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+T ++PP LGPEP A +L F + + +K LL+Q+IVAG+ Sbjct: 110 RFGSVDLVDTGRLEEWPPFAALGPEPLGPGLKARHLAKAFEGRIAAVKLLLLDQQIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL+RA++ P R+ + L L+ I+ VL ++I AGGS+LRDY Sbjct: 170 GNIYVCEALYRARIHPEREGGKVSAR------ALGLLVPAIRAVLEESIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +++RIVQ GRSTF+C CQK Sbjct: 224 RPDGELGYFAKDWRVYGREGEPC--QCGGVVKRIVQGGRSTFFCPRCQK 270 >gi|315282487|ref|ZP_07870891.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] gi|313613871|gb|EFR87611.1| formamidopyrimidine-DNA glycosylase [Listeria marthii FSL S4-120] Length = 273 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVATPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTSKYGEAETRSIKKLGPEPLTEAFTLADFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFAAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGK GE C+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKAGESCV-ICGTPIEKIKLNGRGTHFCPNCQK 273 >gi|302381128|ref|YP_003816951.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] gi|302191756|gb|ADK99327.1| formamidopyrimidine-DNA glycosylase [Brevundimonas subvibrioides ATCC 15264] Length = 287 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 124/294 (42%), Positives = 172/294 (58%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ +T + +R +LRF FP F G + + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVLVGAALTHVRQNRPDLRFPFPERFVERLSGAVVERIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L L + + HLGM+G F ++ + + +H H +SL + R+ + Sbjct: 61 LTALSTGETWVTHLGMTGRFTVDGEQLGEFEEPAPISGKHEH--MSLCALRDGAATRIGF 118 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D RRFGFM L+ T +P LGPEP N F+ +L F K N+K +LL+Q+ Sbjct: 119 ADARRFGFMGLMATEAVDSHPWFAGLGPEPLGNGFSGAHLAEAFDGKKQNIKVSLLDQRT 178 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCEAL+RA++SP + + L +L +++VL DAI AGGS+L Sbjct: 179 VAGLGNIYVCEALYRARISPRIAAGKVSRPR------LERLAVVVREVLNDAIAAGGSTL 232 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ + DG GYFQ+ F VYG+ G+PCL +C ++RRIVQ GRSTFYC CQ+ Sbjct: 233 RDFANADGGHGYFQHRFDVYGREGQPCLGEDCSGVVRRIVQGGRSTFYCPGCQR 286 >gi|229169312|ref|ZP_04297022.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] gi|228614075|gb|EEK71190.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH621] Length = 276 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|239828007|ref|YP_002950631.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] gi|239808300|gb|ACS25365.1| formamidopyrimidine-DNA glycosylase [Geobacillus sp. WCH70] Length = 274 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEIIRR L+ + T+ DI + + F +G+ I D+ RR K Sbjct: 1 MPELPEVEIIRRTLIPLTAGKTIADIQVFWPKIIKYPADVTEFIETMKGQTIRDIHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ +I HL M G + + C K H H+ + T + Y D Sbjct: 61 FLKFTLD-EHVLISHLRMEGRYAV----CKKEDPIEPHTHIIFRFIDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PL LGPEP +F A +L + K N +K ALL+Q +V Sbjct: 111 VRKFGTMHLYRKGEEEARLPLSQLGPEPFSETFTANFLAQRLRKTNRTIKTALLDQTVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L+RA + P R + SL + +L +E+ +L +AI+ GGS++R Sbjct: 171 GLGNIYVDESLFRAGIHPERISSSLTDEE------VARLHREMVTILQEAIEKGGSTVRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G G FQ VYG+ GEPC CGQ I++ V AGR T YC +CQ Sbjct: 225 YVNTNGEAGTFQLQLFVYGRKGEPCQ-RCGQPIQKTVVAGRGTHYCAFCQ 273 >gi|163942319|ref|YP_001647203.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] gi|163864516|gb|ABY45575.1| formamidopyrimidine-DNA glycosylase [Bacillus weihenstephanensis KBAB4] Length = 276 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 155/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPQIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL K+ + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLT------KEEVERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|229019808|ref|ZP_04176610.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] gi|229026034|ref|ZP_04182417.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228735250|gb|EEL85862.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1272] gi|228741479|gb|EEL91677.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1273] Length = 276 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDAEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERVYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|228967683|ref|ZP_04128703.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792016|gb|EEM39598.1| Formamidopyrimidine-DNA glycosylase [Bacillus thuringiensis serovar sotto str. T04001] Length = 276 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F +G+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKKIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTVEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|238798815|ref|ZP_04642284.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] gi|238717323|gb|EEQ09170.1| Formamidopyrimidine-DNA glycosylase [Yersinia mollaretii ATCC 43969] Length = 269 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ A + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILA-LSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL IIVHLGMSGS + A +H+HV + ++N + Y DPR Sbjct: 60 LLELPTG-WIIVHLGMSGSLRVLPEETAA----EKHDHVDLVISNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP + F+ YL + K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWAKDLETSSVLAHLGPEPLSDEFSPQYLFDKSRHKRTLIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL Q + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFAAGILPERAAGSLTQAE------ISLLVTTIKAVLLHSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C CGQ I RSTF+C +CQ Sbjct: 222 QSDGKPGYFAQELQVYGRAGELC-RRCGQRIEIAKHGQRSTFFCRHCQ 268 >gi|148998594|ref|ZP_01826034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|168575632|ref|ZP_02721568.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|307067627|ref|YP_003876593.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] gi|147755592|gb|EDK62639.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP11-BS70] gi|183578675|gb|EDT99203.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae MLV-016] gi|306409164|gb|ADM84591.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae AP200] Length = 274 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDTYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|82701716|ref|YP_411282.1| formamidopyrimidine-DNA glycosylase [Nitrosospira multiformis ATCC 25196] gi|123544992|sp|Q2YBI1|FPG_NITMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|82409781|gb|ABB73890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Nitrosospira multiformis ATCC 25196] Length = 272 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 159/289 (55%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR + ++ + + + NLR+ P G +I V+RR KYL Sbjct: 1 MPELPEVEVVRRGIASGLEGRKIAGLTVRNPNLRWPVP-ELERTLCGLEIRTVTRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ ++I+HLGMSGS + + A I +H+H+ + L K + + DPR Sbjct: 60 LLDCGAG-TLILHLGMSGSLRLL--ALAANIAPQKHDHIDLLLD-----KGMVLRFRDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T +P L LGPEP +F+ L + +++++K L+N +IV G+ Sbjct: 112 RFGAV-LWTTGNATDHPLLSHLGPEPLTEAFDGKLLYSKTRNRSASIKEVLMNSRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L Q I++ L AI+AGGSSLRD+V Sbjct: 171 GNIYANEALFLAGIDPANAAGRIGARR------CAGLAQAIKETLGRAIEAGGSSLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VY +TG+PC CG I +I Q RS+FYC CQK Sbjct: 225 GSDGNPGYFQQQYWVYSRTGQPC-RKCGTNIEQIRQGQRSSFYCPRCQK 272 >gi|306834024|ref|ZP_07467145.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] gi|304423812|gb|EFM26957.1| DNA-formamidopyrimidine glycosylase [Streptococcus bovis ATCC 700338] Length = 296 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVAFETGILGQTFQNIGRRGKYL 83 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 84 LLML-NKQVIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDVR 133 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 134 KFGTMELLYLNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 193 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 194 GNIYVDEALWAAKIHPERVSSSLTDSE------IALLHDEIIQILQLGIVKGGTTIRTYH 247 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 248 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|257875614|ref|ZP_05655267.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] gi|257809780|gb|EEV38600.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC20] Length = 280 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L + +I HL M G + + +H HV T+ + ++ Y+D Sbjct: 61 LIFKLT-DYDLISHLRMEGKYEYFESDPIVD----KHTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P + SL L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPEQPADSLTPAEANV------LHQAIIDVLERAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|221211197|ref|ZP_03584176.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] gi|221168558|gb|EEE01026.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans CGD1] Length = 305 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 31 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 90 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+HV + + + DPR Sbjct: 91 LFEVDAGWF-IVHLGMTGTLRVLPAGGVP--VAAKHDHVDWIFDE------FVLRFRDPR 141 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 142 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAID GGS+LRD Sbjct: 202 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIDRGGSTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 256 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 305 >gi|186475088|ref|YP_001856558.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] gi|238689441|sp|B2JCP3|FPG_BURP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|184191547|gb|ACC69512.1| formamidopyrimidine-DNA glycosylase [Burkholderia phymatum STM815] Length = 276 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRRVERVDVRTPALRWPIPPGFARLLHGRLVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + P +H+HV + + + + DPR Sbjct: 61 LFEIDEGWF-IVHLGMTGTLRVLR-NVPHPPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP SF+ L + + ++K ALL +IV Sbjct: 113 RFGAVLWHPRSAGDVLDHPLLADLGVEPFAPSFSGALLHRKTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTPAGRISLVR------YDLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG I++IVQ RST+YC CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIKQIVQGQRSTYYCPTCQR 276 >gi|260581780|ref|ZP_05849577.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] gi|260095373|gb|EEW79264.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae NT127] Length = 271 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVAVRQPKLRWAVSEELIT-LKKVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQCIS------LVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I +V R++F+C CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGGKIESLVIEQRNSFFCPKCQK 269 >gi|332289053|ref|YP_004419905.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] gi|330431949|gb|AEC17008.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] Length = 285 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + K+ + + + + LR+ ++I+DV RRAKYL Sbjct: 1 MPELPEVETTRKGIQPYTKHQQLVKLVIRTEKLRWVVSKELYQ-IENEEILDVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +LE IIVHLGMSGS + A +H+H+ + L+N + YNDPR Sbjct: 60 IFQLEYGY-IIVHLGMSGSLRVVTAKDAID----KHDHIDMVLSNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T +P L PEP + FN YL + +++ +K+ L+N +V G+ Sbjct: 110 KFGA--WLWTDSIEHFPLFSKLAPEPLSDEFNGEYLYQKSRNRHTAVKSWLMNNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ + P SL K+ +L+ I++ L AI GG++L+D++ Sbjct: 168 GNIYANEVLFNCGIYPNAPVSSLS------KEDCERLVANIKQTLQQAIKQGGTTLQDFI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ + +VYG+ GE C CG +I + RS+FYC CQ Sbjct: 222 QPDGRPGYFQQSLNVYGRKGENC-PTCGHLIEMVTIGQRSSFYCPICQ 268 >gi|256957262|ref|ZP_05561433.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|257077764|ref|ZP_05572125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294781290|ref|ZP_06746636.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|307267955|ref|ZP_07549343.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|256947758|gb|EEU64390.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis DS5] gi|256985794|gb|EEU73096.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis JH1] gi|294451626|gb|EFG20082.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis PC1.1] gi|306515596|gb|EFM84123.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4248] gi|315032492|gb|EFT44424.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0017] gi|315034274|gb|EFT46206.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0027] gi|315149640|gb|EFT93656.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0012] gi|315174877|gb|EFU18894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1346] gi|329577870|gb|EGG59291.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TX1467] Length = 280 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + KL Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VAKLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|293569013|ref|ZP_06680326.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] gi|291588446|gb|EFF20281.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1071] Length = 278 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRSKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|190572171|ref|YP_001970016.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia K279a] gi|229621835|sp|B2FU49|FPG_STRMK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190010093|emb|CAQ43701.1| putative formamidopyrimidine-dna glycosylase (fapy-dna glycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) [Stenotrophomonas maltophilia K279a] Length = 270 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I D+ RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDTAIGSA-VLHLGMSGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGEVHPLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISR------ERYQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|324328478|gb|ADY23738.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 276 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F +G+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIITYPKIVKRPDDAEIFKEMLKGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPIN----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREASSLTAEE------IERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|152979915|ref|YP_001354814.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] gi|166215629|sp|A6T2R7|FPG_JANMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151279992|gb|ABR88402.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] Length = 273 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ +T + L LR+ FP S G+ + RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGQVITGVALRHTGLRWPFPATLSQTLAGRTVRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++I+HLGMSG I + + +H+H + + + DPR Sbjct: 61 LIHFDHG-TLIIHLGMSGHLRILPSD----VPPKKHDHFDLEI------GPQLLRLTDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + LRTLG EP + +F+A +L Q ++S +K LL IV Sbjct: 110 RFGAVLWHAAEDGSIENHLLLRTLGVEPLEAAFSAQWLYQQTRNRSSAIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A+++P + +L + I+++L AI+ GGS+L+D Sbjct: 170 GVGNIYASESLFQARINPKTPAHRIGLAR------YERLAEAIRQILAAAIEQGGSTLKD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + Y +TGEPC C IR+IVQ RSTFYC CQK Sbjct: 224 FIGVNGQSGYFQQNYFCYARTGEPC-RICKTPIRQIVQGQRSTFYCPNCQK 273 >gi|312874220|ref|ZP_07734254.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] gi|311090290|gb|EFQ48700.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2052A-d] Length = 276 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|254243455|ref|ZP_04936777.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] gi|126196833|gb|EAZ60896.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 2192] Length = 270 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LLGAESG-TLISHLGMSGSLRLVESGTPA----SRHEHVDIELASG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L+++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLAPLEHE--LLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSIS------KARYLRLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|307708605|ref|ZP_07645069.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] gi|307615354|gb|EFN94563.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis NCTC 12261] Length = 274 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTNLDEFQKEVPGQIVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFCLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELFAPDLLEAYFISKKLGPEPSEQEFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTTEEAS------AIHDQTISVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C CG +I ++ GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQECA-RCGTVIEKMQLGGRGTHFCPNCQR 272 >gi|71737815|ref|YP_276892.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|90101310|sp|Q48CK1|FPG_PSE14 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71558368|gb|AAZ37579.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326361|gb|EFW82414.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. B076] gi|320331648|gb|EFW87586.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] gi|330872371|gb|EGH06520.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. glycinea str. race 4] Length = 270 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|326386384|ref|ZP_08208007.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] gi|326209045|gb|EGD59839.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Novosphingobium nitrogenifigens DSM 19370] Length = 305 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 168/289 (58%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ +T + + R +LR FP A G +++ + RRAKY Sbjct: 36 MPELPEVETTVRGLATVLAGERLTRVMVRRPDLRRPFPPDLVQALTGARVVALGRRAKYG 95 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + +++ HLGMSG + I+ P + +H+H+ + + + ND R Sbjct: 96 LIQTDRGRTMVFHLGMSGRWRID------PGEIGKHDHLVLE-----TARGRVLALNDAR 144 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+T+ + P LGPEP +L F + + +K LL+Q +VAG+ Sbjct: 145 RFGSVDLVDTAALDAFGPFAALGPEPLGPGLTVAHLAQAFDGRVAAVKLVLLDQGVVAGL 204 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL RA++ P R ++ + L +L+ EI+ VL +AI+AGGS+LRDY Sbjct: 205 GNIYVCEALHRARIHPERAAGAVSRA------ALSRLVLEIRAVLEEAIEAGGSTLRDYA 258 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ G+PC CG +RRIVQ GRSTF+C CQK Sbjct: 259 RPDGELGYFAKEWRVYGREGKPCG--CGGTVRRIVQGGRSTFFCPRCQK 305 >gi|306831910|ref|ZP_07465065.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425836|gb|EFM28953.1| DNA-formamidopyrimidine glycosylase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 296 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 24 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVAFETEILGQTFQNIGRRGKYL 83 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 84 LLML-NKQVIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDVR 133 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 134 KFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 193 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 194 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGISKGGTTIRTYH 247 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 248 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 295 >gi|148992895|ref|ZP_01822514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|168490211|ref|ZP_02714410.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|147928347|gb|EDK79363.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP9-BS68] gi|183571439|gb|EDT91967.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP195] gi|332073303|gb|EGI83782.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA17570] Length = 274 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLNQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|168494399|ref|ZP_02718542.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] gi|183575665|gb|EDT96193.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC3059-06] Length = 274 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|84514657|ref|ZP_01002021.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] gi|84511708|gb|EAQ08161.1| formamidopyrimidine-DNA glycosylase [Loktanella vestfoldensis SKA53] Length = 283 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 117/294 (39%), Positives = 182/294 (61%), Gaps = 16/294 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + VM + ++R +LR+ FP + + G++++ + RR+KY+ Sbjct: 1 MPELPEVETVKAGIAPVMTGQLIAKAEVNRPDLRWPFPENMADRLTGRRVLGLRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK---PIKNP-QHNHVTISLTNNTNTKKYRVIY 116 L++L+ ++++HLGMSG ++ + P P +H+HV + + R+ + Sbjct: 61 LVDLDSAETLLIHLGMSGRILVSGAAQGAFYHPHPAPAKHDHVVLHMDGGA-----RITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG MDL+ T+ + + +R LGPEP N+F+ YL + +N+ +K+ALL+Q+I Sbjct: 116 NDARRFGAMDLMPTAAQDDHWLIRDLGPEPLGNAFDETYLVARLKGRNTPIKSALLDQRI 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYVCE L+RA + P RK + + L+ I+ VL +AI AGGSSL Sbjct: 176 VAGLGNIYVCEVLFRAGIDPRRKAGQIAARR------VASLVPLIRDVLHEAIAAGGSSL 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RDY DG +GYFQ+ F VY + G PC+ +C + I RIVQ+GRS+F+C CQ+ Sbjct: 230 RDYRQSDGELGYFQHGFQVYDREGAPCVTPDCARPISRIVQSGRSSFFCAQCQR 283 >gi|229013789|ref|ZP_04170917.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] gi|228747458|gb|EEL97333.1| Formamidopyrimidine-DNA glycosylase [Bacillus mycoides DSM 2048] Length = 276 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVVITYPKIVKRPDDVEIFKEMLRGETIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|261207883|ref|ZP_05922568.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289566951|ref|ZP_06447355.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|294617838|ref|ZP_06697449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] gi|260078266|gb|EEW65972.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium TC 6] gi|289161250|gb|EFD09146.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium D344SRF] gi|291595911|gb|EFF27193.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1679] Length = 278 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|261408691|ref|YP_003244932.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] gi|261285154|gb|ACX67125.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. Y412MC10] Length = 277 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + ++ + R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRILLD-GLVLVSHLRMEGRYGVYRAEEP----VEKHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSLKDAE------LKRLYHAIVDTLSEAVDAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC + CG I +IV GR T YC CQ Sbjct: 225 YVNGQGEMGMFQNSHQIYGRKDKPCHA-CGGPIHKIVVGGRGTHYCPKCQ 273 >gi|259500514|ref|ZP_05743416.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|302191204|ref|ZP_07267458.1| formamidopyrimidine-DNA glycosylase [Lactobacillus iners AB-1] gi|309808040|ref|ZP_07701959.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|312875632|ref|ZP_07735633.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325912596|ref|ZP_08174979.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] gi|259167898|gb|EEW52393.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners DSM 13335] gi|308168723|gb|EFO70822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 01V1-a] gi|311088886|gb|EFQ47329.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2053A-b] gi|325478017|gb|EGC81146.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 60-B] Length = 276 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|257465199|ref|ZP_05629570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] gi|257450859|gb|EEV24902.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor 202] Length = 274 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTD-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ E ++ HLGMSGS I S +P+ +H+HV + T + YNDPR Sbjct: 60 ILHTEKGDILV-HLGMSGSLGILKESDNQPV--GKHDHVDLITETGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGA--WLWAKEALKHELLAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTEKQ------CERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C +CG +I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEACN-DCGSLIETKIIGQRNTYFCPHCQK 271 >gi|322513603|ref|ZP_08066701.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] gi|322120563|gb|EFX92463.1| DNA-formamidopyrimidine glycosylase [Actinobacillus ureae ATCC 25976] Length = 273 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ T+ I + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLQGKTIKQIVIRTNKLRWAISDELQQ-MQGAKIVSLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLSILPENQQT---AGKHDHVDLITQDGTILR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP +F A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTQNAEQHELITRLGPEPLLEAFTAKYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P T++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGIHPELATQNLTEKQ------CERLVKVIKEVLTKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C +C I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEACN-DCRTAIEAKVIGQRNSYFCPHCQ 269 >gi|325978855|ref|YP_004288571.1| formamidopyrimidine-DNA glycolase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178783|emb|CBZ48827.1| fpg [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 273 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVSFETEILGQTFQNIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 61 LLML-NKQVIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDIR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 111 KFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 171 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRTYH 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 225 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|322387709|ref|ZP_08061318.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] gi|321141576|gb|EFX37072.1| DNA-formamidopyrimidine glycosylase [Streptococcus infantis ATCC 700779] Length = 288 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +++I + + F G+ I + RR KYL Sbjct: 15 MPELPEVETVRRGLEKLILGKKISNIDIRYPKMIKTDLDEFQKEMPGQVIQTMGRRGKYL 74 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV I + ++Y D R Sbjct: 75 LFYLS-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVLIHFEDGGT-----LVYEDVR 124 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 125 KFGTMELLAPELLEAYFISKKLGPEPTEKDFDLGSFKLALKKSKKTIKSHLLDQTLVAGL 184 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRAK+ P R + SL K+ E VL A++ GGS++R Y Sbjct: 185 GNIYVDEVLWRAKVHPSRTSNSLTAQEA------RKVHDETINVLGQAVEKGGSTIRTYT 238 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VY K G+ C S C +I +I GR T +C CQ+ Sbjct: 239 NAFGEDGTMQEFHQVYDKAGQAC-SRCETIIEKIQLGGRGTHFCPKCQR 286 >gi|257081124|ref|ZP_05575485.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] gi|256989154|gb|EEU76456.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis E1Sol] Length = 280 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHKADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLAAFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|312882923|ref|ZP_07742655.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369442|gb|EFP96962.1| formamidopyrimidine-DNA glycosylase [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V + + LR+D P +G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGEKVVKVTVRTPKLRWDIPTELKE-MQGQVIQSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + A +H+HV + L N + YNDPR Sbjct: 60 LIQTKVG-TAIVHLGMSGSLRVLDAELAPQ----KHDHVDVKLANGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L+T+GPEP + F+A Y++ + K +K +++ KIV G+ Sbjct: 110 RFGAWLWSEDGC---HTVLKTMGPEPLTDDFDADYISAKAVSKRVTVKQFIMDNKIVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L N KL++EI+KVL AI GG++L+D+ Sbjct: 167 GNIYANESLFTAGILPTRGAGTLSLNE------WQKLVKEIKKVLSTAIAQGGTTLKDFA 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+ C C ++ R+TF+C YCQ+ Sbjct: 221 QADGKPGYFAQELQVYGKGGQAC-PCCAHPVKEQKIGQRNTFFCEYCQR 268 >gi|229032230|ref|ZP_04188203.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] gi|228729010|gb|EEL80013.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH1271] Length = 276 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDVEIFKEMLRGEKIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R++ SL + ++ + L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPERESSSLTAEE------VERIYEATVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|21245003|ref|NP_644585.1| formamidopyrimidine-DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] gi|24211707|sp|Q8PEQ4|FPG_XANAC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21110728|gb|AAM39121.1| formamidopyrimidine DNA glycosylase [Xanthomonas axonopodis pv. citri str. 306] Length = 271 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S+++HLGMSGS + H+HV ISL + + +NDPR Sbjct: 61 LIDTDAGGSVLLHLGMSGSLRVLPGDTL----PRAHDHVDISLQSGR-----LLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSGTQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVS------LERYRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELFVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|16803604|ref|NP_465089.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes EGD-e] gi|224501496|ref|ZP_03669803.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-561] gi|284801955|ref|YP_003413820.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284995097|ref|YP_003416865.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] gi|21362541|sp|Q8Y6W7|FPG_LISMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16410993|emb|CAC99642.1| mutM [Listeria monocytogenes EGD-e] gi|284057517|gb|ADB68458.1| hypothetical protein LM5578_1710 [Listeria monocytogenes 08-5578] gi|284060564|gb|ADB71503.1| hypothetical protein LM5923_1662 [Listeria monocytogenes 08-5923] Length = 273 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFKATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +QN VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQNKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|90420499|ref|ZP_01228406.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] gi|90335227|gb|EAS48980.1| formamidopyrimidine-DNA glycosylase [Aurantimonas manganoxydans SI85-9A1] Length = 297 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 134/298 (44%), Positives = 179/298 (60%), Gaps = 10/298 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V++ +T + L R +LRF P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPVLEGARITHLHLARPDLRFALPERFAERVTGRRITALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + E+EG+L + +HLGMSGSF IE H+HV +T Sbjct: 61 VAEMEGDLVLAMHLGMSGSFRIEGPEGESLPGVFHHPRSTARLHDHVRFDVTTGDGQPA- 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 VIYNDPRRFG+M L+ + +P LG EP N + L F + + LK LL Sbjct: 120 AVIYNDPRRFGYMTLIARAEMETHPHFAGLGIEPTGNGLSGAALAPAFAGRAAPLKAVLL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+I+AG+GNIYVCEALWR++LSP R +L++ G P L L I++ + DAI AG Sbjct: 180 DQRIIAGLGNIYVCEALWRSRLSPRRAAGTLVKKGGRPSQRLDLLALNIRETIADAIAAG 239 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GSSLRDY DGS+GYFQ++F+ Y + EPC C +IRRIVQ+GRSTF+C CQ+ Sbjct: 240 GSSLRDYRQADGSLGYFQHSFAAYDREHEPCRHAGCRGVIRRIVQSGRSTFFCLVCQR 297 >gi|218708249|ref|YP_002415870.1| formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] gi|254789455|sp|B7VHK6|FPG_VIBSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218321268|emb|CAV17218.1| Formamidopyrimidine-DNA glycosylase [Vibrio splendidus LGP32] Length = 269 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 155/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQEL-KRLEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDTG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGA--WLWSAPDEIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + + L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKVTKQEWL------LLTKEIKQVLATAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCAELIQELKIGQRNTFYCSSCQ 268 >gi|15900847|ref|NP_345451.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|111657968|ref|ZP_01408675.1| hypothetical protein SpneT_02000857 [Streptococcus pneumoniae TIGR4] gi|149010384|ref|ZP_01831755.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182683916|ref|YP_001835663.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|303254437|ref|ZP_07340543.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|303259882|ref|ZP_07345857.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|303262296|ref|ZP_07348240.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|303264718|ref|ZP_07350636.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] gi|303267325|ref|ZP_07353185.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|303269130|ref|ZP_07354909.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|21362546|sp|Q97R61|FPG_STRPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14972445|gb|AAK75091.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae TIGR4] gi|147764865|gb|EDK71794.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP19-BS75] gi|182629250|gb|ACB90198.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CGSP14] gi|301801813|emb|CBW34524.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV200] gi|302598604|gb|EFL65644.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS455] gi|302636619|gb|EFL67110.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS292] gi|302639087|gb|EFL69547.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP-BS293] gi|302641317|gb|EFL71685.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS458] gi|302643135|gb|EFL73422.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS457] gi|302645805|gb|EFL76034.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae BS397] Length = 274 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDVYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|294615647|ref|ZP_06695502.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] gi|291591476|gb|EFF23130.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1636] Length = 278 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|194398197|ref|YP_002037605.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] gi|194357864|gb|ACF56312.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae G54] Length = 274 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFCLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFRFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|289624665|ref|ZP_06457619.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648505|ref|ZP_06479848.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. aesculi str. 2250] gi|298485251|ref|ZP_07003344.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160239|gb|EFI01267.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330871123|gb|EGH05832.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330891348|gb|EGH24009.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. mori str. 301020] gi|330985919|gb|EGH84022.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011779|gb|EGH91835.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRAR------YLKLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|285019922|ref|YP_003377633.1| formamidopyrimidine-DNA glycosylase [Xanthomonas albilineans GPE PC73] gi|283475140|emb|CBA17639.1| probable formamidopyrimidine-dna glycosylase protein [Xanthomonas albilineans] Length = 270 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + L R +LR+ P + G++I + RRAKYL Sbjct: 1 MPELPEVETTRRGLEPHLAGRRIHGVILRRPDLRWPIPPEVTQQLPGQRIAGIHRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +++ HLGMSGS + H+HV +SL + + +NDPR Sbjct: 61 LLETAAGSALL-HLGMSGSLRVLPGDTPPRT----HDHVDMSLEDGRVLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + +P L LGPEP ++F+ YL + + +K L++Q+IV G+ Sbjct: 111 RFGC--LLWQAPGTLHPLLAELGPEPLSDAFDGDYLFQLSRGRKAPVKTFLMDQRIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R + + +L + + +L AI GG++LRD++ Sbjct: 169 GNIYAAESLFQAGISPLRAAGEVSRAR------YARLAEATKAILGYAIQRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG+++R R++ +C +CQ+ Sbjct: 223 SPDGAPGYFEQELSVYGREGEAC-KRCGRLLRHASIGQRASVWCGHCQR 270 >gi|86147282|ref|ZP_01065597.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] gi|85834997|gb|EAQ53140.1| formamidopyrimidine-DNA glycosylase [Vibrio sp. MED222] Length = 269 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 155/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ + LR+D P G+ I +SRRAKYL Sbjct: 1 MPELPEVEVSRMGISPHLVGETIKTLTFRTPKLRWDIPQELKK-LEGQVIRSISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + + IVHLGMSGS + +H+HV + LTN + YNDPR Sbjct: 60 LIETDTG-TAIVHLGMSGSLRVLDAD----FPPAKHDHVDLKLTNGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L GPEP + FNA Y+ + K+ +K +++ K+V G+ Sbjct: 110 RFGA--WLWSAPDEIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ ++++P+R + + L +EI++VL AI GG++L+D+ Sbjct: 168 GNIYANEALFSSRINPLRSASKVTKQEWL------LLTKEIKQVLTTAIRQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C NC ++I+ + R+TFYC+ CQ Sbjct: 222 QADGKPGYFAQELQVYGKAGEQC-PNCEELIQELKIGQRNTFYCSSCQ 268 >gi|46201678|ref|ZP_00208205.1| COG0266: Formamidopyrimidine-DNA glycosylase [Magnetospirillum magnetotacticum MS-1] Length = 279 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 119/293 (40%), Positives = 159/293 (54%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+++ V RRAKYL Sbjct: 1 MPELPEVETVARGLAQVWDGRRFVSVETRRSGLRVPFPKDFAQRLTGRRVESVGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ L ++ HLGMSG I + H+HV V DPR Sbjct: 61 VVRLDDGLVMLGHLGMSGRMTI---GALRNAPPGPHDHV-----EWVTDAGISVTLTDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E +P L +GPEP D+SF+A L K+ +K LL+Q+ VAG+ Sbjct: 113 RFGLFTLCEAGELAAHPLLAGIGPEPLDDSFDAKVLAQALKGKSGPIKTVLLDQRTVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + +L+ I+ VL +A+ AGGS+L+D+ Sbjct: 173 GNIYVCESLFRARISPLRPAGSLTKAETG------RLVPLIKAVLTEAVAAGGSTLKDHA 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +GYFQ++F VYG+ GE C CG I RI QAGRSTFYC Q Sbjct: 227 RPDGELGYFQHSFQVYGREGEACPDCPGAPQCGG-ISRITQAGRSTFYCAKRQ 278 >gi|217964289|ref|YP_002349967.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|217333559|gb|ACK39353.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HCC23] gi|307571145|emb|CAR84324.1| mutM [Listeria monocytogenes L99] Length = 273 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCI-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|149376939|ref|ZP_01894694.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] gi|149358831|gb|EDM47300.1| formamidopyrimidine-DNA glycosylase [Marinobacter algicola DG893] Length = 274 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 110/292 (37%), Positives = 155/292 (53%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +N T+T + + LR+ P + + G I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHCENRTITQVTVRDGRLRWPVPGNLAELIEGSVIHTVDRRAKYL 60 Query: 61 LIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 LI + ++IVHLGMSGS + A + H+HV ++L N R+ +N Sbjct: 61 LIGVSSANAAGTLIVHLGMSGSLRVITDQSAPLL----HDHVELTLDNG-----IRLRFN 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG ET Q+P L +LGPEP FN L K + +K +++ +V Sbjct: 112 DPRRFGCWLWSETP--DQHPLLASLGPEPLAPEFNGRLLYRLSRSKKTPVKPFIMDNHVV 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL++A + P R + D +L++ I++ L AI GG++LR Sbjct: 170 VGVGNIYANEALFKAGIHPRRAAGRIS------LDRYNRLVEAIRETLSAAILMGGTTLR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ DG GYF + VYG+ GE C CG ++ I RST YC CQ+ Sbjct: 224 DFVNSDGKPGYFAQSLLVYGRNGEFC-RECGHPLKEIRMNQRSTVYCGKCQR 274 >gi|117924919|ref|YP_865536.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] gi|166215631|sp|A0L837|FPG_MAGSM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117608675|gb|ABK44130.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Magnetococcus sp. MC-1] Length = 275 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + + + + + LR+ P G+ I V+RRAKY Sbjct: 1 MPELPEVETTRRGIEPALVGKRLCGVVVRQPQLRWPIPVKTLEKELVGQVIQQVARRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +++VHLGMSGS I + +H+HV + V +DP Sbjct: 61 LLWRCPQG-TLLVHLGMSGSLRIV----PEHTPPAKHDHVDWVMEGGQM-----VRLHDP 110 Query: 120 RRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + TS + ++P L LGPEP S N YL + +KN +++Q +V Sbjct: 111 RRFGAVVWIPVTSPEEEHPLLAKLGPEPLHRSLNGRYLHQGSRGRQLAVKNYIMDQSVVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+RA ++P + + L I+ VL D+I+ GG++LRD Sbjct: 171 GVGNIYASEALFRAGIAPAQAAGKVGLGR------YRALACAIKAVLGDSIEQGGTTLRD 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ DG GYF + +VYG+ G+ C CG I + V RS++YC CQ+ Sbjct: 225 FIGSDGKPGYFVQSLNVYGRAGKAC-PKCGTTIEKQVLGQRSSYYCPQCQR 274 >gi|157963915|ref|YP_001503949.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] gi|189044678|sp|A8HA27|FPG_SHEPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157848915|gb|ABV89414.1| formamidopyrimidine-DNA glycosylase [Shewanella pealeana ATCC 700345] Length = 271 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TVTD+ + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDNTVTDLIVRNPSLRWPVP-EIAKQIIGQTIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I + +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRILPATTPA----EKHDHIDLVLASGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FNA YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EQAHPLLSKLGPEPLTDAFNAPYLLESLANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVD------AERIEILVSEVKQILAGAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ G+ C + CG M+ I R+T +C+ CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGKTC-TQCGHMLSEIKLGQRATVFCSLCQQ 270 >gi|288905821|ref|YP_003431043.1| formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] gi|288732547|emb|CBI14119.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus gallolyticus UCN34] Length = 273 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ ++ RR KYL Sbjct: 1 MPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTDLVSFETEILGQTFQNIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L II HL M G +++ + + + +H HV L + + ++Y D R Sbjct: 61 LLML-NKQVIISHLRMEGKYLLF----PEQVPDNKHFHVLFQLDDGST-----LVYQDIR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y + LGPEP +F+ T + +K LL+Q +V G+ Sbjct: 111 KFGTMELLYPNQIEAYFQKKNLGPEPTKETFDLSEFTRKLKASKKIIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R + SL + + L EI ++L I GG+++R Y Sbjct: 171 GNIYVDEALWAAKIHPERVSLSLTDSE------IALLHDEIIRILQLGIAKGGTTIRTYH 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q VYGKTGEPC C I +I GR T C CQK Sbjct: 225 NAFGEDGNMQQFLQVYGKTGEPC-PRCATPIEKIKVGGRGTHLCPACQK 272 >gi|295691491|ref|YP_003595184.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] gi|295433394|gb|ADG12566.1| formamidopyrimidine-DNA glycosylase [Caulobacter segnis ATCC 21756] Length = 287 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 117/297 (39%), Positives = 164/297 (55%), Gaps = 20/297 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + +R +LRF P F G +I+ + RRAKY+ Sbjct: 1 MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRVTGARILRLDRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 L L+ ++++HLGM+G F I + + +H HV Sbjct: 61 LAPLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFETEAGAT---- 116 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V Y DPRRFGFMDL+ T ++P T+GPEP +F+ L F + K LL Sbjct: 117 -VTYYDPRRFGFMDLIPTDRVDRHPWFATMGPEPLGEAFDTRTLEKAFANRKQGPKTLLL 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAG+GNIYVCEAL RA +SP + ++ + P L I+ VL +A++ G Sbjct: 176 DQRTVAGLGNIYVCEALHRAHISPFKPAGAVARKRLGP------LTTAIKDVLAEAVEVG 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 230 GSTLKDFAAADGALGYFQHRFRVYDREGEPCPTPGCKGIIAREVQAGRSTFFCPVCQ 286 >gi|167561491|ref|ZP_02354407.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis EO147] gi|167568721|ref|ZP_02361595.1| formamidopyrimidine-DNA glycosylase [Burkholderia oklahomensis C6786] Length = 276 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R +++++V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVKRVDVRTAMLRWPVPAGFAELLRAREVLNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L +LG EP +F L + + ++K ALL+ IV Sbjct: 113 RFGAVLWHPRDAGDVQAHPLLASLGVEPFSPAFTGALLFKRTRGRTVSVKQALLSGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------CERLAEAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ SVY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCSVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 276 >gi|95929141|ref|ZP_01311885.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] gi|95134639|gb|EAT16294.1| formamidopyrimidine-DNA glycosylase [Desulfuromonas acetoxidans DSM 684] Length = 272 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ + D+ ++ LR+ P + G+ ++ + RRAKYL Sbjct: 1 MPELPEVETVCAGLHDLVVGQQIVDVRVYESRLRYPVPMELADVLSGETVVSLRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+++ G +I+HLGMSGS +H+HV I + + ++DPR Sbjct: 61 LMDI-GPQVVILHLGMSGSLRWVSDGQTPQ----KHDHVDIVFSGG------CLRFHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ Q+ L LGPEP + F+ +L + + +K+ L+ ++V G+ Sbjct: 110 RFGLIVLAPPPVE-QHRLLAHLGPEPLSDDFDGQWLFEKSRGRRIAIKSLLMENRVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + ++P + + L L+ +I+KVL +AI AGG++L+D+V Sbjct: 169 GNIYANESLFLSGMAPKKTSGELTDQQCVI------LVDKIKKVLAEAIKAGGTTLQDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G GYFQ VYG+ +PCL CG MI R RSTFYC CQK Sbjct: 223 NGHGQPGYFQQKLYVYGRDEQPCL-ICGTMIERCRIGQRSTFYCPECQK 270 >gi|293390965|ref|ZP_06635299.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951499|gb|EFE01618.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D7S-1] Length = 285 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAE-LHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSG+ I +H+H I + N + YNDPR Sbjct: 74 VIHTEQGY-IIGHLGMSGTVRIVSHGSPID----KHDHFDIVMNNGK-----LLRYNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + +KK + LK L++ +V GI Sbjct: 124 RFGAWLWTEK--LDEFHLFLKLGPEPLSEEFNAEYLFKKLYKKTTALKTVLMDNTVVVGI 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 182 GNIYANESLFLCGLHPLKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 236 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|78049946|ref|YP_366121.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038376|emb|CAJ26121.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 276 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 6 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 65 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 66 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQNGRVLR-----FNDPR 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 117 RFGC--LLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 175 GNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRDFI 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 229 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 276 >gi|309803096|ref|ZP_07697193.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|309810236|ref|ZP_07704081.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] gi|308164604|gb|EFO66854.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 11V1-d] gi|308169508|gb|EFO71556.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 2503V10-D] Length = 276 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|166709959|ref|ZP_02241166.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 271 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL H + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSDTQAHELLAALGPEPLSEAFTGDYLHALAHGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + D +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVS------LDRYRRLAAAVKDILSYAIRRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|253997189|ref|YP_003049253.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] gi|253983868|gb|ACT48726.1| formamidopyrimidine-DNA glycosylase [Methylotenera mobilis JLW8] Length = 271 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ +++ TV + + +LR+ P + + +G+ + ++RRAKY+ Sbjct: 1 MPELPEVETTRLGLLSLVE-QTVAQVVIRNPSLRWPIPDNLADLLQGQTLRALTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +++HLGMSG + AK +H+H + T+ + DPR Sbjct: 60 LAHFDHG-VLLLHLGMSGRICL----LAKNETAQKHDHFDLVFTDGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L Q+ L LGPEP D++F YL + + +K +++ +V G+ Sbjct: 110 RFGAV-LWAGEHYTQHKLLSVLGPEPLDDAFTGAYLQQHIRTRTAAIKTTIMDGHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA+++P L L+ EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARINPATPANKLNLRQ------CETLVAEIKATLSDALKAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VYG+TGEPC CG+ I I Q RSTFYC CQK Sbjct: 223 GTDGNPGYFQQQYFVYGRTGEPC-RVCGKHILNIKQGQRSTFYCGVCQK 270 >gi|229099046|ref|ZP_04229980.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] gi|229118077|ref|ZP_04247436.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228665300|gb|EEL20783.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock1-3] gi|228684274|gb|EEL38218.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-29] Length = 276 Score = 306 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL Q + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTQEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|47096729|ref|ZP_00234314.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|224499778|ref|ZP_03668127.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Finland 1988] gi|254828201|ref|ZP_05232888.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|254898269|ref|ZP_05258193.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J0161] gi|254912238|ref|ZP_05262250.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] gi|254936565|ref|ZP_05268262.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|47014913|gb|EAL05861.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 1/2a F6854] gi|258600589|gb|EEW13914.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N3-165] gi|258609160|gb|EEW21768.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes F6900] gi|293590214|gb|EFF98548.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes J2818] Length = 273 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|309805278|ref|ZP_07699330.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|312871811|ref|ZP_07731899.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|329920100|ref|ZP_08276931.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] gi|308165512|gb|EFO67743.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LactinV 09V1-c] gi|311092753|gb|EFQ51109.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 3008A-a] gi|328936554|gb|EGG32998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners SPIN 1401G] Length = 276 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|69246665|ref|ZP_00604055.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257878418|ref|ZP_05658071.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257882836|ref|ZP_05662489.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257889383|ref|ZP_05669036.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257894396|ref|ZP_05674049.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|258614817|ref|ZP_05712587.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium DO] gi|260560007|ref|ZP_05832185.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|293559953|ref|ZP_06676461.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|294623285|ref|ZP_06702150.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|314937781|ref|ZP_07845098.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|314941673|ref|ZP_07848553.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|314948921|ref|ZP_07852290.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] gi|314950961|ref|ZP_07854028.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|314992963|ref|ZP_07858359.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|314996410|ref|ZP_07861453.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|68195139|gb|EAN09597.1| Formamidopyrimidine-DNA glycolase [Enterococcus faecium DO] gi|257812646|gb|EEV41404.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,230,933] gi|257818494|gb|EEV45822.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,502] gi|257825743|gb|EEV52369.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,410] gi|257830775|gb|EEV57382.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium 1,231,408] gi|260073842|gb|EEW62166.1| formamidopyrimidine-DNA glycolase [Enterococcus faecium C68] gi|291597313|gb|EFF28499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium U0317] gi|291606041|gb|EFF35467.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1162] gi|313589392|gb|EFR68237.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a01] gi|313592486|gb|EFR71331.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133B] gi|313596816|gb|EFR75661.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133A] gi|313599564|gb|EFR78407.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133C] gi|313642812|gb|EFS07392.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0133a04] gi|313644711|gb|EFS09291.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium TX0082] Length = 278 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLERLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-CELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L I VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSIIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTPIVKTKVAQRGTHYCPNCQR 273 >gi|290893965|ref|ZP_06556941.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] gi|290556503|gb|EFD90041.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-071] Length = 273 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFSTGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|229546724|ref|ZP_04435449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256854275|ref|ZP_05559639.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|307275296|ref|ZP_07556439.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|307290894|ref|ZP_07570784.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|229308073|gb|EEN74060.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1322] gi|256709835|gb|EEU24879.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis T8] gi|306497964|gb|EFM67491.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0411] gi|306507930|gb|EFM77057.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2134] gi|315029748|gb|EFT41680.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4000] Length = 280 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQIALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|188993761|ref|YP_001905771.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. B100] gi|229621836|sp|B0RZ50|FPG_XANCB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167735521|emb|CAP53736.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris] Length = 271 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAEQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRVLPGDTP----PRAHDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + L +LGPEP +F YL + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQRDCETHELLASLGPEPLSPAFTGDYLHALARGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + + +L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSR------ERYRRLADAVKEILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G+ C CG+ ++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELMVYGREGQACKH-CGRELKHATIGQRATVWCAACQR 271 >gi|304407961|ref|ZP_07389611.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] gi|304342980|gb|EFM08824.1| formamidopyrimidine-DNA glycosylase [Paenibacillus curdlanolyticus YK9] Length = 299 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R P F+AA G I V RR K Sbjct: 1 MPELPEVETVRRTLNELVAGKTIVRVTVSLPRIIRRPAEPEQFAAALAGHTITSVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + L+ L ++ HL M G + + H HV T+ T + Y D Sbjct: 61 FLRLVLD-GLVLVSHLRMEGRYGVYRQDELVET----HTHVIFHFTDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL PPL LG EP D+ F L + + + +K LL+Q V Sbjct: 111 VRQFGTMDLFAPEEDLLLPPLNKLGMEPLDDDFTEKALRERLSSRTTKIKPLLLDQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL++A + P R +L + T +L + I+ L A+ AGGSS++ Sbjct: 171 GLGNIYVDEALFQAGIHPERTADTLKRAEWT------RLYEAIRDTLGRAVAAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+A YG+ GEPC S CG +I + V GR T C CQ Sbjct: 225 YVNGQGEMGMFQHALLAYGRGGEPCTS-CGTVIEKFVVGGRGTHVCPRCQ 273 >gi|85374938|ref|YP_459000.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] gi|122543790|sp|Q2N7Y8|FPG_ERYLH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84788021|gb|ABC64203.1| formamidopyrimidine-DNA glycosylase [Erythrobacter litoralis HTCC2594] Length = 271 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 160/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T +R ++RF FP A G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLARFLQGERITRTVTNRPDMRFPFPDGLGQALTGATVVSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ P + +H+H+ I T +R DPR Sbjct: 61 LIHTDRDQTMIFHLGMSGRWRID------PDETDKHDHLLIE------TADHRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV T Q+P +GPEP ++ +L + +K LL+Q IVAG+ Sbjct: 109 RFGWVDLVGTQALDQWPGFAAMGPEPLGDALTIEHLRAALSGRKQAIKLCLLDQAIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALW A++ P + + K L LI I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWHARIHPRKAGGRVS------KQALSLLITAIRDVLEQSIRDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+ G+PC + G IRR Q GRST+YC CQ+ Sbjct: 223 QPDGELGYFATRFQVYGRDGQPCHRDDGGTIRRFAQGGRSTWYCPRCQR 271 >gi|15595554|ref|NP_249048.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|107099341|ref|ZP_01363259.1| hypothetical protein PaerPA_01000353 [Pseudomonas aeruginosa PACS2] gi|116054085|ref|YP_788528.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|218889098|ref|YP_002437962.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] gi|254237407|ref|ZP_04930730.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|296386853|ref|ZP_06876352.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAb1] gi|21362549|sp|Q9L7T2|FPG_PSEAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|122261774|sp|Q02U58|FPG_PSEAB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226706485|sp|B7V2S0|FPG_PSEA8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9946207|gb|AAG03746.1|AE004473_8 formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PAO1] gi|7229496|gb|AAF42853.1| mismatch repair protein MutM [Pseudomonas aeruginosa PAO1] gi|115589306|gb|ABJ15321.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169338|gb|EAZ54849.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa C3719] gi|218769321|emb|CAW25081.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa LESB58] Length = 270 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPA----SRHEHVDIELASG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L+++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLAPLEHE--LLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSIS------KARYLRLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|325925629|ref|ZP_08187013.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] gi|90101323|sp|Q3BM92|FPG_XANC5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|325543978|gb|EGD15377.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] Length = 271 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSGTQTHELLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSLAR------YRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|240950195|ref|ZP_04754482.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] gi|240295282|gb|EER46068.1| formamidopyrimidine-DNA glycosylase [Actinobacillus minor NM305] Length = 274 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K + I + LR+ P + +G KIID+SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLKGEKIKQIICRTEKLRWPIPTALTE-MQGAKIIDLSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ E ++ HLGMSGS I S +P+ +H+HV + T + YNDPR Sbjct: 60 ILHTEKGDILV-HLGMSGSLGILKESDNQPV--GKHDHVDLITETGTILR-----YNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ L LGPEP N F + L + +K +KN ++N +IV G+ Sbjct: 112 KFGA--WLWAKEALKHELLAKLGPEPLSNEFTSGRLWEKSRQKTVAVKNFIMNNEIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A + P ++L + +L++ I++VL +I GG++L+D++ Sbjct: 170 GNIYACESLFMAGIHPELAAQNLTEKQ------CERLVKVIKEVLTKSIIQGGTTLKDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GE C +CG I + R+T++C +CQK Sbjct: 224 QPDGKPGYFAQVLQVYGRKGEACN-DCGSFIETKIIGQRNTYFCPHCQK 271 >gi|313112028|ref|ZP_07797813.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] gi|310884315|gb|EFQ42909.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa 39016] Length = 270 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPA----SRHEHVDIELVSG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L+++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLAPLEHE--LLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSIS------KARYLRLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|325912043|ref|ZP_08174441.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] gi|325475993|gb|EGC79161.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners UPII 143-D] Length = 276 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQ----KHEHVQFAFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|152986116|ref|YP_001345845.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] gi|166198731|sp|A6UYG0|FPG_PSEA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150961274|gb|ABR83299.1| formamidopyrimidine-DNA glycosylase [Pseudomonas aeruginosa PA7] Length = 270 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVERVIVRERRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LLGAEAG-TLISHLGMSGSLRLVESGTPA----SRHEHVDIELASG-----MSLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L+++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLAPLEHE--LLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + S+ K +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRKPAGSIS------KARYLRLAEEIKRILAIAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R I R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFC-KVCGSTLREIRLGQRASVYCPRCQR 270 >gi|294625785|ref|ZP_06704403.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663922|ref|ZP_06729353.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599900|gb|EFF44019.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606307|gb|EFF49527.1| formamidopyrimidine-DNA glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 271 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL + + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQSGR-----LLRFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSGAQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVS------LERYRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ SVYG+ GE C CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELSVYGREGEAC-KQCGRVLKHATIGQRATVWCGSCQR 271 >gi|221231733|ref|YP_002510885.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] gi|220674193|emb|CAR68721.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae ATCC 700669] Length = 274 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|220933505|ref|YP_002512404.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] gi|254789453|sp|B8GUQ6|FPG_THISH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219994815|gb|ACL71417.1| DNA-formamidopyrimidine glycosylase [Thioalkalivibrio sp. HL-EbGR7] Length = 271 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + VT + + LR+ P + G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIERHVTGRRVTSVIVREPRLRWPVPGDLAERLTGHTLGRVLRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE++ L +++HLGMSGS + +H+H+ + L + + +DPR Sbjct: 61 LIEVDTGL-LLLHLGMSGSLRVVTPDAP----LRKHDHIDLCLDSGRCLR-----LHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +E + +P L LGPEP F+A YL K+ +K ++N +V G+ Sbjct: 111 RFGAVLWIE-GPAHAHPLLAELGPEPLGKDFDADYLFRSTRKRRVAIKQHIMNSHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R L + +L++ I++VL +AI GG++LRD+V Sbjct: 170 GNIYASEALFLAGIRPGRAAGRLTRAE------CARLVETIRQVLGEAIAQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYFQ VYG+TG C++ C +++IVQ RST+YC CQ+ Sbjct: 224 REDGSHGYFQQHLRVYGRTGLACMA-CETPVKQIVQGNRSTYYCPACQR 271 >gi|229076088|ref|ZP_04209056.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] gi|228706951|gb|EEL59156.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock4-18] Length = 276 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLVDLGPEPFDAELTPQYLQEKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|194363823|ref|YP_002026433.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] gi|238693487|sp|B4SRN0|FPG_STRM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|194346627|gb|ACF49750.1| formamidopyrimidine-DNA glycosylase [Stenotrophomonas maltophilia R551-3] Length = 270 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 164/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ V + L R +LR+ P + G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LLDTAAGSA-VLHLGMSGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ +P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+ Sbjct: 111 RFG--SLLWQPAGEVHPLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A +SP+R+ + + + +L ++++L AI GG++LRD++ Sbjct: 169 GNIYAAESLFKAGISPLREAGKISR------ERYQRLADAVKEILGYAITRGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ G PC NCG+ ++ R++ +C++CQ+ Sbjct: 223 SPDGAPGYFEQELLVYGRDGLPC-PNCGRALKHATIGQRASVWCSHCQR 270 >gi|190151346|ref|YP_001969871.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264701|ref|ZP_07546281.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692363|sp|B3GZD6|FPG_ACTP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189916477|gb|ACE62729.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870013|gb|EFN01777.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 273 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGMVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ GE C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKGEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|29375464|ref|NP_814618.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227554990|ref|ZP_03985037.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229548815|ref|ZP_04437540.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255971331|ref|ZP_05421917.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255973950|ref|ZP_05424536.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256761635|ref|ZP_05502215.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256960004|ref|ZP_05564175.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256964300|ref|ZP_05568471.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|257083793|ref|ZP_05578154.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|257089290|ref|ZP_05583651.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257415443|ref|ZP_05592437.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis AR01/DG] gi|257418474|ref|ZP_05595468.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257421125|ref|ZP_05598115.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|293383757|ref|ZP_06629664.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|293388767|ref|ZP_06633260.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|307271879|ref|ZP_07553147.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|307278425|ref|ZP_07559500.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|312904439|ref|ZP_07763598.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|312907027|ref|ZP_07766023.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|312952853|ref|ZP_07771715.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|312978715|ref|ZP_07790442.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|39931263|sp|Q837G3|FPG_ENTFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29342924|gb|AAO80688.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis V583] gi|227175872|gb|EEI56844.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis HH22] gi|229306044|gb|EEN72040.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis ATCC 29200] gi|255962349|gb|EET94825.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T1] gi|255966822|gb|EET97444.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T2] gi|256682886|gb|EEU22581.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T3] gi|256950500|gb|EEU67132.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Merz96] gi|256954796|gb|EEU71428.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis HIP11704] gi|256991823|gb|EEU79125.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis Fly1] gi|256998102|gb|EEU84622.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis CH188] gi|257157271|gb|EEU87231.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ARO1/DG] gi|257160302|gb|EEU90262.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis T11] gi|257162949|gb|EEU92909.1| formamidopyrimidine-DNA glycosylase lyase mutM [Enterococcus faecalis X98] gi|291078833|gb|EFE16197.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis R712] gi|291081924|gb|EFE18887.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis S613] gi|295113920|emb|CBL32557.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Enterococcus sp. 7L76] gi|306504931|gb|EFM74126.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0860] gi|306511385|gb|EFM80387.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0855] gi|310627012|gb|EFQ10295.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 512] gi|310629369|gb|EFQ12652.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0102] gi|310632137|gb|EFQ15420.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0635] gi|311288422|gb|EFQ66978.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis DAPTO 516] gi|315145153|gb|EFT89169.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2141] gi|315148037|gb|EFT92053.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX4244] gi|315152952|gb|EFT96968.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0031] gi|315155182|gb|EFT99198.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0043] gi|315157510|gb|EFU01527.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0312] gi|315163061|gb|EFU07078.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0645] gi|315167986|gb|EFU12003.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1341] gi|315171782|gb|EFU15799.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1342] gi|315574208|gb|EFU86399.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309B] gi|315577338|gb|EFU89529.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0630] gi|315581649|gb|EFU93840.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0309A] gi|323480060|gb|ADX79499.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis 62] Length = 280 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|257086218|ref|ZP_05580579.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|256994248|gb|EEU81550.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis D6] gi|315027065|gb|EFT38997.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX2137] Length = 280 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLSGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWHAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|315303333|ref|ZP_07873959.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] gi|313628294|gb|EFR96801.1| formamidopyrimidine-DNA glycosylase [Listeria ivanovii FSL F6-596] Length = 273 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + +H ++ P F G+++ V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKINQVIVHVPKMIKNTPPDEFVHMLVGQEMEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNETD----EVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + L + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLLFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGK GEPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKIGEPCV-ICGTQIEKIKLNGRGTHFCPNCQK 273 >gi|312872916|ref|ZP_07732976.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] gi|311091438|gb|EFQ49822.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners LEAF 2062A-h1] Length = 276 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+D+ R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNKVKARKKAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|239996975|ref|ZP_04717499.1| formamidopyrimidine-DNA glycosylase [Alteromonas macleodii ATCC 27126] Length = 269 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P A G+ +I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITQVVVRERRMRWPIPQE-VANVEGQSVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S +H+HV I L + +NDPR Sbjct: 60 LIETAKG-TLILHLGMSGKLRVIDASTPII----KHDHVDIVLNTGKCLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGAVLF--QAPDMQIAMLDNLGPEPLTDDFDDKRLFKLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAAGNISAARYQS------LTATIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC CG+ I V R+TF+CT+CQ+ Sbjct: 222 QTDGKPGYFAQHLNVYGRKGEPC-EVCGKAIESKVIGQRNTFFCTHCQR 269 >gi|332362411|gb|EGJ40211.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1056] Length = 274 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIDQVRVCYAKMIGTGADSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRAK+ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAKIHPARPADSLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|329929158|ref|ZP_08282944.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328936835|gb|EGG33270.1| DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 277 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + ++ + R D F+ +G + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDHVSVNLPRIIQRPDDIEAFAFMLKGHTVEGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRILLD-GLVLVSHLRMEGRYGVYRAEEP----VEKHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++Q+ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFQHAPLAKLGYEPLDDTFTFGTFKEVIGTKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A+DAGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERNANSLKDAE------LKRLYHAIVDTLSEAVDAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQN+ +YG+ +PC + CG I +IV GR T YC CQ Sbjct: 225 YVNGQGEMGMFQNSHQIYGRKDKPCHA-CGGPIHKIVVGGRGTHYCPKCQ 273 >gi|315653651|ref|ZP_07906571.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] gi|315489013|gb|EFU78655.1| DNA-formamidopyrimidine glycosylase [Lactobacillus iners ATCC 55195] Length = 276 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 149/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADLFQRKVVGQKISAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDTPKQ----KHEHVQFAFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW++K+ P L N +D L +L +I + AI G++ ++ Sbjct: 172 GNIYTDEVLWQSKIHP------LSIANKIAQDSLVELFYDINNTIKIAIQYHGTTFHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q+ VYGK+GEPC S C + +I GR T +C CQ Sbjct: 226 DADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIKVNGRGTTFCPLCQ 272 >gi|261867142|ref|YP_003255064.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412474|gb|ACX81845.1| heptosyltransferase family [Aggregatibacter actinomycetemcomitans D11S-1] Length = 285 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 15 MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAE-LHHVKILDLTRRAKYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSG+ I +H+H+ I + N + YNDPR Sbjct: 74 VIHTEQGY-IIGHLGMSGTVRIVFHGSPID----KHDHLDIVVNNGK-----LLRYNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + HKK + LK L++ +V GI Sbjct: 124 RFGAWLWTEK--LDEFHLFLKLGPEPLSEEFNAEYLFKKLHKKTTALKTVLMDNTVVVGI 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 182 GNIYANESLFLCGLHPLKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 235 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I +V R++FYC CQK Sbjct: 236 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLVIGQRNSFYCPTCQK 283 >gi|66047985|ref|YP_237826.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae B728a] gi|81307826|sp|Q4ZM34|FPG_PSEU2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|63258692|gb|AAY39788.1| Formamidopyrimidine-DNA glycolase [Pseudomonas syringae pv. syringae B728a] gi|330954991|gb|EGH55251.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae Cit 7] Length = 270 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|229105214|ref|ZP_04235863.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] gi|228678140|gb|EEL32368.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus Rock3-28] Length = 276 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ D+ + + R D F RG+KI + RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLRGEKIETIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV T+ T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFTDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + + PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEELNQMPLADLGPEPFDAELTPQYLQGKLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+ + P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSHIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YMNSQGQIGSFQELLNVYGKKGEPCVT-CGTILEKTVVGGRGTHYCPICQ 273 >gi|325696174|gb|EGD38065.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK160] Length = 274 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDE----VPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLEAYFAARKLGPEPTDSDFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPNCQK 272 >gi|16127937|ref|NP_422501.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] gi|13425473|gb|AAK25669.1| formamidopyrimidine-DNA glycosylase [Caulobacter crescentus CB15] Length = 315 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 115/296 (38%), Positives = 164/296 (55%), Gaps = 20/296 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L V+ ++ + +R +LRF P F G +I+ + RRAKY+L Sbjct: 30 PELPEVETVRRGLEPVLSGARLSSVRANRPDLRFPLPDGFVQRLTGARILRLDRRAKYIL 89 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ ++++HLGM+G F I + + +H HV + Sbjct: 90 APLDRGDTLVMHLGMTGRFEIAAPEGTVRPGDFAREVTPDDKHAHVVFQTEDGAT----- 144 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V Y DPRRFGFMDL+ T + +GPEP F+A L F + K LL+ Sbjct: 145 VTYFDPRRFGFMDLIPTDRVSHHAWFAAMGPEPLGEGFDARTLEKAFANRKQGPKTLLLD 204 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+ VAG+GNIYVCEAL R+ +SP + + ++ + TP L I+ VL +A++ GG Sbjct: 205 QRTVAGLGNIYVCEALHRSGISPFKPSGNIAKKRLTP------LTAAIKDVLAEAVEVGG 258 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQ 288 S+L+D+ DG++GYFQ+ F VY + GEPC C +I R VQAGRSTF+C CQ Sbjct: 259 STLKDFAAADGALGYFQHRFRVYDREGEPCPTPACKGVIAREVQAGRSTFFCPVCQ 314 >gi|48474237|sp|Q8VW76|FPG_PASPI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16904663|dbj|BAB71962.1| formamidopyrimidine-DNA glycosylase homolog [Photobacterium damselae subsp. piscicida] Length = 269 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + TVTDI + LR+ P + + + I V RRAKYL Sbjct: 1 MPELPEVEVTRLGITPHVLHQTVTDIVIRNGRLRWPIPDDINQ-IKQQPITKVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + IVHLGMSGS + A +H+HV ++L++ + YNDPR Sbjct: 60 LLDTPVGSA-IVHLGMSGSLRVLPAGTA----PEKHDHVDLALSSGEILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG K+ L LGPEP + F A YL + K + +K +++ IV G+ Sbjct: 110 RFGAWLWQPVDTKHHV--LAKLGPEPLTDVFTADYLQQKAKGKRTAIKQFIMDNHIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P + + L L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFSAGIHPQKAAGEVTP------QALTVLVDEIKAVLAFAIQQGGTTLKDFK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYGK G PC CG + + R+T YC+ CQ+ Sbjct: 222 NADGKPGYFAQELQVYGKGGLPC-PKCGTELAEVKIGQRATVYCSQCQQ 269 >gi|294010807|ref|YP_003544267.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] gi|292674137|dbj|BAI95655.1| formamidopyrimidine-DNA glycosylase [Sphingobium japonicum UT26S] Length = 270 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 118/289 (40%), Positives = 159/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSLLTRVEPRRADLRFPIPADLRQRLTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ P + H+H+ I + NDPR Sbjct: 61 LIDTDRGDTLIFHLGMSGRWRID------PAEIGAHDHLLI-----GTGGGRLLALNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + + Y P +GPEP F L K +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRSEAREAYNPFTRMGPEPLGPDFTPDSLAAALKGKATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R+ + + L L+ I++VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTREAGRIGRAR------LVLLVDAIREVLAAAIAAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG IRR + GRSTF+C CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPC--VCGTPIRRRLDGGRSTFFCPKCQK 270 >gi|226224165|ref|YP_002758272.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes Clip81459] gi|225876627|emb|CAS05336.1| Putative formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 273 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|254852187|ref|ZP_05241535.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|254931504|ref|ZP_05264863.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|255520154|ref|ZP_05387391.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-175] gi|300764770|ref|ZP_07074760.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|258605492|gb|EEW18100.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL R2-503] gi|293583056|gb|EFF95088.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes HPB2262] gi|300514446|gb|EFK41503.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL N1-017] gi|328474917|gb|EGF45717.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 220] gi|332312006|gb|EGJ25101.1| Formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. Scott A] Length = 273 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|312901579|ref|ZP_07760852.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] gi|311291374|gb|EFQ69930.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0470] Length = 280 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLASFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWHAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|292486569|ref|YP_003529437.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|292897807|ref|YP_003537176.1| formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC 49946] gi|291197655|emb|CBJ44750.1| formamidopyrimidine-DNA glycosylase [DNA-(apurinic or apyrimidinic site) lyase] [Erwinia amylovora ATCC 49946] gi|291551984|emb|CBA19021.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora CFBP1430] gi|312170630|emb|CBX78893.1| formamidopyrimidine DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 269 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + +I V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNNRLRWPVSQEIHT-LSDQPVISVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS + + + +H+HV + +++ + Y DPR Sbjct: 60 LLELPTG-WIIIHLGMSGSLRV----LPEDLPAAKHDHVDLVMSHGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP F A YL + + + +K L++ K+V G+ Sbjct: 110 RFGA--WLWCADLNGSSVLSHLGPEPLSEGFCARYLFEKSRGRRTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R +L + L+ I+ VL+ +I+ GG++LRD++ Sbjct: 168 GNIYASESLFVAGILPDRPAMALSEQEAG------LLVSTIKAVLLRSIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC C I A RSTF+C CQK Sbjct: 222 QSDGKPGYFAQELQVYGREGEPC-RVCALPIESSKHAQRSTFFCRRCQK 269 >gi|260752387|ref|YP_003225280.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551750|gb|ACV74696.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 270 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 159/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTVRGLSEVLMGEKIIDVKVRGASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I P +H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKIN------PENFEKHDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R LGPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNLGPEPLTRNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L D + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNL------NFDEITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQCE--CGHTIERYTLGGRSTFLCSSCQK 270 >gi|301154721|emb|CBW14184.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Haemophilus parainfluenzae T3T1] Length = 271 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 148/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K T+ I + + LR+ + + I+D SRRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKGFTIEKIVVRQPQLRWVVSPELTT-LKNVNILDTSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPHDSPID----KHDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T ++ LGPEP + FNA YL + KK++ LK L++ IV G+ Sbjct: 110 RFGA--WLWTESLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKSTALKTFLMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P++ +L + L++ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANETLFLCGLHPMKLAENLTRKQ------CALLVETIKDVLAKAITQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC C I +V R++FYC +CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PKCSTKIESMVIGQRNSFYCPHCQK 269 >gi|93279440|pdb|2F5N|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic1 gi|93279443|pdb|2F5O|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling G:c Base Pair Ic3 gi|93279446|pdb|2F5P|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair Ic2 Length = 274 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|315223054|ref|ZP_07864933.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] gi|315188004|gb|EFU21740.1| formamidopyrimidine-DNA glycosylase [Streptococcus anginosus F0211] Length = 274 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADPFVLELPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L N +I HL M G ++ + ++ +H+HV T+ ++ ++Y D R Sbjct: 61 IFYLT-NWVLISHLRMEGKYLFY----PEEVQLTKHSHVIFHFTDGSS-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP ++ F+ + K +K LL+Q +VAG+ Sbjct: 111 KFGTMELLRKEQITSYFTERKLGPEPTESDFHLLPFETALKKSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +SL +L ++I VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARAAQSLTAGEA------EELRKQIIAVLQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|254831965|ref|ZP_05236620.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes 10403S] Length = 273 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDK------KIKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|307286687|ref|ZP_07566773.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|306502165|gb|EFM71449.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0109] gi|315165260|gb|EFU09277.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX1302] Length = 280 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQVDDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|327534460|gb|AEA93294.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis OG1RF] Length = 280 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQCHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|330965061|gb|EGH65321.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++II VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIIQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDP--HNHELLIRLGPEPLTDLFDGERLYQRSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|148984712|ref|ZP_01817980.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|147923103|gb|EDK74218.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP3-BS71] gi|301799946|emb|CBW32529.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae OXC141] Length = 274 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFCLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFRFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|56552083|ref|YP_162922.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] gi|59802555|sp|Q9X3X1|FPG_ZYMMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56543657|gb|AAV89811.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 270 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 117/289 (40%), Positives = 160/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ + D+ + R +LR P G II +SRRAKY Sbjct: 1 MPELPEVETTIRGLSEVLMGEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + ++I HLGMSG + I P +H+H + NN + V DPR Sbjct: 61 IIVNDRDDALIFHLGMSGRWKIN------PENFEKHDHFVLQTKNN-----FIVSLYDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV+ + ++ R +GPEP +FN YL + ++ +K LL+QK+VAGI Sbjct: 110 RFGSLDLVKKNQLLEWSYFRNIGPEPLTGNFNPEYLQKKLFSSSAPIKKILLDQKVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL +AK+ P R +++L D + L+ I+ +L AI GGS+L+DY Sbjct: 170 GNIYACEALHQAKIHPQRPSKNL------NFDEITSLVFSIKNILQKAIAEGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G +GYF F VYGK GE C CG I R GRSTF C+ CQK Sbjct: 224 RPNGELGYFSTKFKVYGKEGEQCE--CGHTIERYTLGGRSTFLCSSCQK 270 >gi|213967812|ref|ZP_03395959.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] gi|301382449|ref|ZP_07230867.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato Max13] gi|302061159|ref|ZP_07252700.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato K40] gi|302132048|ref|ZP_07258038.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927588|gb|EEB61136.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + A +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLAAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDP--HNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|304414128|ref|ZP_07395496.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] gi|304283342|gb|EFL91738.1| Formamidopyrimidine-DNA glycosylase [Candidatus Regiella insecticola LSR1] Length = 269 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + T+ + + LR+ S+ R + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIAPYLVDQTLLYVVVRNPRLRWPVSEEISS-LRDQPVFSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSG I K +H+H+ + ++N + Y DPR Sbjct: 60 LLELAAG-WIIIHLGMSGRLHI----LPKDRIAEKHDHIDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L LGPEP F YL + K + +K L++ KIV GI Sbjct: 110 RFGA--WLWAKDFTASTVLAHLGPEPLGAEFTEQYLFEKSRHKRTLIKPWLMDNKIVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P SL QN L+ I+KVL+DAI+ GG++LRD++ Sbjct: 168 GNIYASECLFVAGILPTEPAGSLTQNE------CKLLVSAIKKVLLDAIEQGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G PC C +I + Q RSTF+C +CQ Sbjct: 222 QSDGRPGYFAPRLQVYGRAGAPCY-RCTHLIETVKQGQRSTFFCRHCQ 268 >gi|149002521|ref|ZP_01827455.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] gi|237650881|ref|ZP_04525133.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974] gi|237821332|ref|ZP_04597177.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CCRI 1974M2] gi|147759458|gb|EDK66450.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae SP14-BS69] Length = 274 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +V G+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVTGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLNQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|119475393|ref|ZP_01615746.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] gi|119451596|gb|EAW32829.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2143] Length = 282 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + + LR+ P S+ + +KI+ V RRAKYL Sbjct: 12 MPELPEVETTRRGISPYVQGRIVKQLVVRQPKLRWLIPPQLSSLIKNRKILSVERRAKYL 71 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ SII+HLGMSGS I S H+HV L + + + DPR Sbjct: 72 LLRLDNG-SIIIHLGMSGSLRIIDASEPPM----AHDHVDFVLDDGVAMR-----FTDPR 121 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + + + L +LGPEP F+ L + + + +K L++ K V G+ Sbjct: 122 RFGCV-LWQGASEPIHSLLASLGPEPLSLDFDGDLLYQRSRGRKAPVKTFLMDNKNVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + + L +++KVL AI+ GG++LRD+V Sbjct: 181 GNIYANEALFAAGIKPNRASGRISRQRYQV------LADQVKKVLAQAIEQGGTTLRDFV 234 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ A VYG+ G+PC+ C Q + I RST YC +CQ+ Sbjct: 235 GGDGKPGYFKQALKVYGRGGKPCV-ICDQHLIEIRLGQRSTVYCRHCQR 282 >gi|257865987|ref|ZP_05645640.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257872320|ref|ZP_05651973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] gi|257799921|gb|EEV28973.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC30] gi|257806484|gb|EEV35306.1| formamidopyrimidine-DNA glycosylase [Enterococcus casseliflavus EC10] Length = 280 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L + +I HL M G + + +H HV T+ + ++ Y+D Sbjct: 61 LIFKLT-DYDLISHLRMEGKYEYFESDPIVD----KHTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAEIHPEQPADSLTPAEANV------LHQAIIDVLERAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I + A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKTKVAQRGTHFCPQCQK 273 >gi|226939249|ref|YP_002794320.1| Fpg [Laribacter hongkongensis HLHK9] gi|254789441|sp|C1DBB4|FPG_LARHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226714173|gb|ACO73311.1| Fpg [Laribacter hongkongensis HLHK9] Length = 272 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 148/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + + LR+ SA G ++ V RRAKYL Sbjct: 1 MPELPEVETVRAGLTPHLTGRQIKAVTVREPRLRWPVDPDLSAKLAGLEVRTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +IVHLGMSGS + +H+H+ L + + V Y+DPR Sbjct: 61 LIGFGHEQWLIVHLGMSGSVRVLPDDTPPQ----KHDHLDFILDDG-----HLVRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +P L LGPEP + F+A L H + LK AL++ +V G+ Sbjct: 112 RFGAV-LWHLGPPDSHPLLSRLGPEPLSDGFDATGLLHALAGRRQALKVALMDNAVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A L P R SL + +L+Q ++ L AI AGGS+LRD+ Sbjct: 171 GNIYANESLFEAGLDPRRPALSLTADEAG------QLVQSVRHTLARAIAAGGSTLRDFR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ ++VYG+ G+ C CG ++ R RSTF+C CQ+ Sbjct: 225 DAIGKPGYFQQDYAVYGRQGQSC-PRCGGLVERCRLGQRSTFFCPACQR 272 >gi|259503618|ref|ZP_05746520.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] gi|259168442|gb|EEW52937.1| DNA-formamidopyrimidine glycosylase [Lactobacillus antri DSM 16041] Length = 277 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K+ + I ++ + F A G+ I DV RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKDRKINAIDVYYGKTITNDVEKFRQALIGQTIEDVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL+++ HL M G + + +H HV T+ + + Y+D R Sbjct: 61 LFRFSNNLTMVSHLRMEGKYYNQPIGGPID----KHTHVVFQFTDGSE-----LCYHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+TLGPEP F + + H+ +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEKTVGGLKTLGPEPTAADFKLDFFRDELHRSRGKIKPFLLNQQHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + SL D + L I K L A G+++ + Sbjct: 172 GNIYADEVLWMSKINPEQPANSLSP------DQVQALHDNIIKELAVATKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGGFQERLNAYGRGGEKC-PRCGTKMVKIKVAQRGTTFCPHCQ 272 >gi|289167814|ref|YP_003446083.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] gi|288907381|emb|CBJ22218.1| formamidopyrimidine-DNA glycosylase [Streptococcus mitis B6] Length = 274 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIRYPKMIKTDLDEFRKEVPGQIVESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFQFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFISKKLGPEPREQDFDLQAFQTALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVYPARPSQTLTAEEMT------AIRDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGKEC-SRCGTLIEKIQLGGRGTHFCPNCQR 272 >gi|327470595|gb|EGF16051.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK330] Length = 274 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDE----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLSHFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|209519647|ref|ZP_03268437.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] gi|209499933|gb|EDZ99998.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. H160] Length = 276 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 143/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTAALRWPIPADLAKILRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + Y DPR Sbjct: 61 LFEIDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRYRDPR 112 Query: 121 RFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++P L +LG EP +F + + ++K ALL IV Sbjct: 113 RFGAVLWHPREEGDILEHPLLASLGAEPFSPAFTGALMYRLTRGRKVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AID GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YELLADAVRVTLAAAIDKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V DG GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSDGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|256850825|ref|ZP_05556214.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260661036|ref|ZP_05861950.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|282934506|ref|ZP_06339761.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297205698|ref|ZP_06923093.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] gi|256615887|gb|EEU21075.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 27-2-CHN] gi|260547973|gb|EEX23949.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii 115-3-CHN] gi|281301453|gb|EFA93742.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|297148824|gb|EFH29122.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus jensenii JV-V16] Length = 275 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVEI+R+ L ++ + ++ + N+ FS + K+II + R AK+L Sbjct: 1 MPEMPEVEIVRKTLNEIVLGKIIKEVKVWYPNIIIGDSESFSDQLKEKQIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L NL+I+ HL M G + + AK +H+HV T+ T+ + YND R Sbjct: 61 LFRLSDNLTIVSHLRMEGKYRLASPQDAKD----KHDHVEFIFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ T + + ++ LGPE + F Y K N+K LL+Q +V+G+ Sbjct: 112 KFGRMQLIRTGTEKEKTGIKKLGPEALSDDFTLSYFKQALKNKKKNIKATLLDQDVVSGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +++ P R SL N + KL I +V+ AI G+++ ++ Sbjct: 172 GNIYVDETLWLSEIYPERPANSLADNE------IKKLYLAINQVISQAIKERGTTVHTFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG+ GE C CG ++++ AGR T +C CQ Sbjct: 226 DAEGQTGGYQKYLKVYGRAGEKCF-RCGNVLQKTKVAGRGTTFCPKCQ 272 >gi|21233569|ref|NP_639486.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770535|ref|YP_245297.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] gi|24211706|sp|Q8P3C4|FPG_XANCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81303518|sp|Q4UNU6|FPG_XANC8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21115430|gb|AAM43368.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575867|gb|AAY51277.1| formamidopyrimidine DNA glycosylase [Xanthomonas campestris pv. campestris str. 8004] Length = 271 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ G I DV RRAKYL Sbjct: 1 MPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIAAQIEQLLPGATITDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSAVLHLGMSGSLRVLPGDTP----PRAHDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + L +LGPEP +F YL + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQRDCETHELLASLGPEPLSAAFTGDYLHALACGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + + + +L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVSR------ERYRRLADAVKEILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ VYG+ GE C +CG ++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELMVYGREGEAC-RHCGGELKHATIGQRATVWCAACQR 271 >gi|330874684|gb|EGH08833.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPIPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDP--HNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ +PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGAQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|325570070|ref|ZP_08145995.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] gi|325156898|gb|EGC69069.1| DNA-formamidopyrimidine glycosylase [Enterococcus casseliflavus ATCC 12755] Length = 280 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ N T+ + + + FSA +G++ RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVLNKTIESVEILWPRIIESPEVPIFSALLKGQRFEKFERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L + +I HL M G + + +H HV T+ + ++ Y+D Sbjct: 61 LIFKLT-DYDLISHLRMEGKYKYFESDPIVD----KHTHVIFHFTDGS-----QLNYHDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV+ Y + LGPEP F + +K LL+QK+V G Sbjct: 111 RKFGRMTLVDKDQSAAYKGIMQLGPEPKPELFLLEAFEQGLKRSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P + SL+ + L + I VL +++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPEQPADSLMPTE------VDVLHEAIIDVLERSVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ + +VYG+TG PC CG I +I A R T +C CQK Sbjct: 225 LNALGEAGKFQMSLNVYGQTGNPCG-RCGTPIVKIKVAQRGTHFCPQCQK 273 >gi|84621927|ref|YP_449299.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188579098|ref|YP_001916027.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|90101324|sp|Q5H667|FPG_XANOR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123523504|sp|Q2P8V2|FPG_XANOM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689555|sp|B2STU3|FPG_XANOP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|84365867|dbj|BAE67025.1| formamidopyrimidine DNA glycosylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523550|gb|ACD61495.1| formamidopyrimidine-DNA glycosylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 271 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTL----PRAHDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP +F YL + + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSDIQAHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A +SP+R+ + D +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHCAGISPLREAGKVS------LDRYRRLAAAVKDILSYAIRRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ + R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRVLKHAMIGQRATVWCGSCQR 271 >gi|322372544|ref|ZP_08047080.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] gi|321277586|gb|EFX54655.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. C150] Length = 273 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVLGRTILSVEVKVPKMVKTSYQSFLNELPGQRIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLLFTDQVPTN----KHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F + + +K LL+QK+VAG+ Sbjct: 111 KFGTFDLLSKNQEEAYFTKKKLGPEPTKKAFKYASFERALMRSDKPIKPLLLDQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELS------KAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|254784434|ref|YP_003071862.1| formamidopyrimidine-DNA glycosylase [Teredinibacter turnerae T7901] gi|259647151|sp|C5BLG1|FPG_TERTT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|237685174|gb|ACR12438.1| DNA-formamidopyrimidine glycosylase [Teredinibacter turnerae T7901] Length = 272 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + +T + L LR+ S G+ ++ RR KYL Sbjct: 1 MPELPEVETTRRGIAPHILHHPITAVTLRHTQLRWPIDKALSRNLPGRTLVRADRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ ++I HLGMSGS I + +H+H+ + + + Y+DPR Sbjct: 61 LLAVDDGRTLIWHLGMSGSLRIVEPTEP----PGKHDHIDLRFAHGRVLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L Q+ + LGPEP + FN YL + K+++ +K+ +++ ++V G+ Sbjct: 112 RFGAF-LATADDPAQHALICHLGPEPLTDDFNGEYLYERSRKRSTAVKSWIMDSRVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P+R L + ++L I+ VL +I GG++LRD+V Sbjct: 171 GNIYANESLFLAKIHPLRAAGKLTRP------ACHRLADIIKAVLARSITQGGTTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +VYG+ GEPC C + + + R+T YCT+CQ Sbjct: 225 GGDGKPGYFAQQLNVYGRGGEPC-PVCAKPLTEKPLSQRTTVYCTHCQ 271 >gi|28867644|ref|NP_790263.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|37999398|sp|Q88AH6|FPG_PSESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28850879|gb|AAO53958.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tomato str. DC3000] gi|331014957|gb|EGH95013.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ VSRRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDGRLRWPVPEDLDIRLSGQRIVQVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + A +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLAAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDP--HNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREARGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 270 >gi|330818348|ref|YP_004362053.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] gi|327370741|gb|AEA62097.1| Formamidopyrimidine-DNA glycosylase [Burkholderia gladioli BSR3] Length = 275 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P +F+AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGHRVRRVDVRTAMLRWPVPENFAAALESREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL+ IVHLGM+G+ + A + +H+H+ + + DPR Sbjct: 61 LFELDAGWF-IVHLGMTGTLRVLPGGVAP--QAGKHDHIDWIFDACV------LRFRDPR 111 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +++ L +LG EP +F A L + + ++K ALL IV Sbjct: 112 RFGAVLWHPREQGDIHEHHLLTSLGVEPFSPAFTAALLYRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|291333254|gb|ADD92963.1| formamidopyrimidine DNA glycosylase [uncultured archaeon MedDCM-OCT-S04-C140] Length = 305 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 122/312 (39%), Positives = 179/312 (57%), Gaps = 30/312 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L+ + N T+ ++ + R+ LR+ FP A G + + RRAKYL Sbjct: 1 MPELPEVETVRQGLLQGILNRTIEEVLIRREGLRYPFPKDL-ATIAGTTVTGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA----------------------KPIKNPQHNH 98 LI+L+ + ++ HLGMSG + + A + +H+H Sbjct: 60 LIDLDDDRVLLSHLGMSGRYTLFDADEASSAPRHLLTTVNGGVPVSSFGERTGYGGKHDH 119 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + T+ + R +Y DPRRFG +DL + P L LGPEP D + A L Sbjct: 120 LEFIFTDGS-----RAVYTDPRRFGIVDLFHRMEEPVQPLLEILGPEPFDP-WGAGDLAA 173 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +++K ALL+QK V G+GNIY CE+L RA LSP R+ R L++ NG P L L+ Sbjct: 174 ALMGRKTSIKLALLDQKTVVGVGNIYACESLHRAGLSPRREARGLVKKNGQPTQRLESLV 233 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQA 277 I+ VL +A+ +GGS+L D+ +DG++GYF + F+VYG+ GE C CG ++RRIVQ+ Sbjct: 234 LHIKTVLEEALASGGSTLNDFASVDGTLGYFSHQFAVYGREGEACTKDGCGGVVRRIVQS 293 Query: 278 GRSTFYCTYCQK 289 RSTFYC+ CQ+ Sbjct: 294 NRSTFYCSSCQR 305 >gi|306825397|ref|ZP_07458737.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432335|gb|EFM35311.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 274 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ ++ I + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDLDEFQREVPGQVIESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + I +H HV I + ++Y D R Sbjct: 61 LFFLT-DKVLISHLRMEGKYFYYPDQ----IPERKHAHVLIHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP + +F+ K +K+ LL Q +VAG+ Sbjct: 111 KFGTMELLAPDLLDAYFVSKKLGPEPREKNFDLQSFQVALAKSKKPIKSHLLAQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R ++SL + T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQSLTEEEAT------AVHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C S CG +I + GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKTGQAC-SRCGTIIEKFQLGGRGTHFCPQCQR 272 >gi|114326823|ref|YP_743980.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] gi|114314997|gb|ABI61057.1| formamidopyrimidine-DNA glycosylase [Granulibacter bethesdensis CGDNIH1] Length = 300 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 119/298 (39%), Positives = 174/298 (58%), Gaps = 21/298 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R +LRF P +A G + D RR KY+ Sbjct: 8 MPELPEVETVMRGLRARLEGRRIVRAEVRRPDLRFPLPPGLAARLTGAYVRDFRRRGKYI 67 Query: 61 LIELEGNLSIIVHLGMSGSFIIE---HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L+ L+G S+++HLGMSG F++ T+ + + +H HV++ + Sbjct: 68 LMRLDGGDSLLIHLGMSGRFVLRAPADTTLPEGHEPERHEHVSMMAEDGWIAA-----LV 122 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG MDLV T+ + + L ++GPEP +++F L F + + +K ALL+Q+IV Sbjct: 123 DPRRFGMMDLVPTAAEDAHRLLSSMGPEPLEDAFCLSGLEKAFAGRRTAVKLALLDQRIV 182 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA ++P+R L + L +LI I++ L +AI AGGSSLR Sbjct: 183 AGLGNIYVSEALFRAGINPLRAAGDLSRAE------LRRLIPAIRETLTEAIAAGGSSLR 236 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSN------CGQMIRRIVQAGRSTFYCTYCQK 289 DYV DG +GYFQ+A+ VYG+ G+PC C I +IVQ GRST++C Q+ Sbjct: 237 DYVQPDGELGYFQHAWKVYGRAGQPCEHCPGLSAGCQG-IVQIVQGGRSTYFCPCTQQ 293 >gi|39931196|sp|Q7MPS3|FPG_VIBVY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 269 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 60 IIETDVGSA-IVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 110 RFGAWLYAAPGEDHDV--LGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 168 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 222 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 268 >gi|315633560|ref|ZP_07888850.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] gi|315477602|gb|EFU68344.1| DNA-formamidopyrimidine glycosylase [Aggregatibacter segnis ATCC 33393] Length = 274 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ T+ I + + LR+ A KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYTIEKIEVRQPKLRWAVSPEL-ATLHQVKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSG+ I C +H+H+ I L N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGTVRIVPHDCPID----KHDHLDIVLNNGR-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++ LGPEP FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEK--LDEFHLFLKLGPEPLSEEFNADYLFKKSRKKTTALKTLLMDNTVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L + +L+ I+ VL AI+ GG++L+D++ Sbjct: 168 GNIYANESLFLCGLHPMKLAANLTRKQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG G+PC CG I + R++FYC CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKGKPC-PKCGTKIESLTIGQRNSFYCPMCQK 269 >gi|307262493|ref|ZP_07544138.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306867870|gb|EFM99701.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 273 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|37678473|ref|NP_933082.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] gi|37197213|dbj|BAC93053.1| formamidopyrimidine-DNA glycosylase [Vibrio vulnificus YJ016] Length = 294 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ + LR+ P +G+ I + RRAKYL Sbjct: 26 MPELPEVEVSRMGITPHLLNQTIQSLIFRTPKLRWVIPSELKK-LQGQVIRHIGRRAKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE + + IVHLGMSGS + +H+HV + L+N + YNDPR Sbjct: 85 IIETDVGSA-IVHLGMSGSLRVLDAD----FPAGKHDHVDLKLSNGKVLR-----YNDPR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +GPEP ++F+ Y+ + K +K +++ KIV G+ Sbjct: 135 RFGAWLYAAPGEDHDV--LGNIGPEPLTDAFDGQYMFEKAQGKRVAVKQFIMDNKIVVGV 192 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P R T SL +L+ I++ L AI+ GG++L+D+ Sbjct: 193 GNIYASESLFRSRILPTRATMSLSAEE------WQRLVSHIKQTLQTAIEQGGTTLKDFS 246 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C CG+ I+ + R+TFYC+YCQ Sbjct: 247 QADGKPGYFAQELQVYGKAGESC-PECGEAIQELKIGQRNTFYCSYCQ 293 >gi|313608605|gb|EFR84469.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-208] Length = 273 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFDDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTPAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + + + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVCPERAANSLSDKE------IKHIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 273 >gi|149908605|ref|ZP_01897267.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] gi|149808439|gb|EDM68376.1| putative formamidopyrimidine-DNA glycosylase [Moritella sp. PE36] Length = 270 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++N +T I + LR+ P A G + V RRAKYL Sbjct: 1 MPELPEVEVSRQGIAPYLENAQITQIIVRNGQLRWPVPMALQDAV-GCTVTSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E +II+HLGMSGS + +S A +H+HV I L + + NDPR Sbjct: 60 LLETEKG-TIIIHLGMSGSLRVLDSSVA----VEKHDHVDIVLNSGKCLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + ++ L +LGPEP + F A L + + +K+ L++ IV G+ Sbjct: 110 RFGSV-LWQVGDVLEHKLLASLGPEPLTDDFTAQRLFDRSRSRKVPVKSFLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A ++P R ++ L++E++ VL AI GG++L+D+ Sbjct: 169 GNIYANEALFSAGINPKRAAGNVS------LQRYKVLVEEVKLVLAKAIAQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYGK G+PC CG+ ++ + R+T YC CQ+ Sbjct: 223 QTDGKPGYFVQELQVYGKAGKPC-PKCGEELKAMKIGQRNTIYCNQCQR 270 >gi|296448042|ref|ZP_06889946.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] gi|296254442|gb|EFH01565.1| formamidopyrimidine-DNA glycosylase [Methylosinus trichosporium OB3b] Length = 290 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 130/295 (44%), Positives = 175/295 (59%), Gaps = 11/295 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V + + L R +LRF FP F+A G++++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPVFTRSPIERVELRRADLRFPFPPGFAARLAGRRVLALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-----HNHVTISLTNNTNTKKYRVI 115 + E++G ++I+HLGMSGSF I+ + H+HV + + RV Sbjct: 61 IGEIDGGDALIMHLGMSGSFRIDAADPEGVFHRARDTKAAHDHVVLHFSGGA-----RVT 115 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YNDPRRFGFM LV +P LG EP L + + + LK ALL+Q+ Sbjct: 116 YNDPRRFGFMLLVPRVELAAHPLFVGLGVEPLGPELTPETLAAELAGRKAPLKAALLDQR 175 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYVCEAL RA LSP+R L+ G PK L L++ I++VL +AI+AGGSS Sbjct: 176 TIAGLGNIYVCEALHRAHLSPLRAAGGLVDAKGRPKRGLVDLVRAIREVLGEAIEAGGSS 235 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ DGS+GYFQ++F VY + PC C + RI Q+GRSTF+C CQK Sbjct: 236 LRDHRQTDGSLGYFQHSFRVYDREDAPCPTPGCRGQVSRIAQSGRSTFFCRDCQK 290 >gi|289434844|ref|YP_003464716.1| hypothetical protein lse_1479 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171088|emb|CBH27630.1| fpg [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 273 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + ++ P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQNLVPGKKIDQVIVRVPKMIKNTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMNETD----EVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKFGEADTNSIKKLGPEPLTPAFTLEAFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + AK+ P R SL + + + + ++ +A+ GGS++R Y Sbjct: 171 IGNIYADEICFEAKVRPERAANSLSNKE------IKLVFEATKNIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q VYGKTGEPC+ C I +I GR T +C CQK Sbjct: 225 VNSQGELGRYQEKLKVYGKTGEPCV-ICRTQIEKIKLNGRGTHFCPNCQK 273 >gi|313891294|ref|ZP_07824912.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] gi|313120361|gb|EFR43482.1| DNA-formamidopyrimidine glycosylase [Streptococcus pseudoporcinus SPIN 20026] Length = 273 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVVGKCIESVTVKVPKMIVSNPETFAGDLAGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +I HL M G +++ + + +H HV + + ++Y D R Sbjct: 61 IFRFS-DLLMISHLRMEGKYLLFEGAVPEN----KHFHVFFHFRDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F ++K LL QK+VAG+ Sbjct: 111 KFGTLELIARDGLDLYFSQRKLGPEPTKNEFKLKIFETALRLSKKSIKPLLLEQKVVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P+R L + + ++ + +L AID GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLAADLKKAE------IKRIHDQTVAILAFAIDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T YC CQK Sbjct: 225 NTLGMDGSMQDYLQVYGQTGKPC-PRCGSAILKLKVGGRGTHYCPKCQK 272 >gi|330970964|gb|EGH71030.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL +I+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIQIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|312868766|ref|ZP_07728958.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] gi|311095752|gb|EFQ54004.1| DNA-formamidopyrimidine glycosylase [Lactobacillus oris PB013-T2-3] Length = 277 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 140/288 (48%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + K + I ++ + F A G+ I D+ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAKGRKINAIDVYYGKTITNDVEDFRQALIGQTIEDIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL+++ HL M G + + +H HV T+ T + Y+D R Sbjct: 61 LFRFSNNLTMVSHLRMEGKYYNQPIGGPID----KHTHVVFQFTDGTE-----LCYHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + L+TLGPEP F + + + +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVETGDEKTVGGLKTLGPEPTAADFKLAFFQDELGRSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +K++P + SL + L I K L A G+++ + Sbjct: 172 GNIYVDEVLWMSKINPEQPANSLTPDQAAV------LHDNIIKELAVATKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG+ GE C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGGFQERLNAYGRGGEKC-PRCGAKMVKIKVAQRGTTFCPHCQ 272 >gi|330898971|gb|EGH30390.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 270 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGQRLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|165977434|ref|YP_001653027.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250371|ref|ZP_07336570.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253680|ref|ZP_07535547.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|238687532|sp|B0BU16|FPG_ACTPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|165877535|gb|ABY70583.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302650841|gb|EFL80998.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858916|gb|EFM90962.1| Heptosyltransferase family [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 273 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAISDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + T + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGTVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAGLHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|237802341|ref|ZP_04590802.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025198|gb|EGI05254.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG ++R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGLPC-KVCGTLLREIKLGQRASVYCPKCQR 270 >gi|256617749|ref|ZP_05474595.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] gi|256597276|gb|EEU16452.1| formamidopyrimidine-DNA glycolase [Enterococcus faecalis ATCC 4200] Length = 280 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQVAGQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|24379994|ref|NP_721949.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] gi|26006954|sp|P55045|FPG_STRMU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24377981|gb|AAN59255.1|AE014992_10 putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans UA159] Length = 273 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNL-NRQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L ++ + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKKSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|270157974|ref|ZP_06186631.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|289163759|ref|YP_003453897.1| formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] gi|269989999|gb|EEZ96253.1| formamidopyrimidine-DNA glycosylase [Legionella longbeachae D-4968] gi|288856932|emb|CBJ10746.1| putative formamidopyrimidine-DNA glycosylase MutM [Legionella longbeachae NSW150] Length = 274 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 162/289 (56%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + ++ T++ IC+H LR P + GKKI+ ++RRAKY+ Sbjct: 1 MPELPEVETTKEGIKLHLEGQTISRICVHNPRLRIPVPDRINELCAGKKILAITRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L +++HLGMSG + S +H+H+T++L NN + + DPR Sbjct: 61 LIQLSQG-HLLIHLGMSGHLRMVELSSIPQ----KHDHITVALNNN-----LLLRFYDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + Y++P L LG EP FN YL + KN +K+ +++ KIV G+ Sbjct: 111 RFGLFLYIDKN-PYKHPLLAHLGKEPLSEEFNGHYLFQKGKNKNKPIKSFIMDNKIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P T+ L + KL + I++VL AI GG++L+D+ Sbjct: 170 GNIYATESLFLAKIHPSTPTKILSEETQL------KLAKHIKEVLQQAIACGGTTLKDFY 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + VYG+ +PC+ C I ++ GR++ +C CQK Sbjct: 224 SFDGKPGYFSISLKVYGRKNQPCM-QCQHPIASVILGGRNSTFCPKCQK 271 >gi|162147553|ref|YP_001602014.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209545659|ref|YP_002277888.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|189044595|sp|A9HI30|FPG_GLUDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|161786130|emb|CAP55712.1| putative formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] gi|209533336|gb|ACI53273.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter diazotrophicus PAl 5] Length = 286 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 118/292 (40%), Positives = 168/292 (57%), Gaps = 17/292 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R + + + T+ + + R +LRF FP A G I +RRAKY+ Sbjct: 1 MPELPEVETVMRGMRLHLDGKTIARVAVRRADLRFPFPADLVARLEGATITGFARRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++++HLGMSG ++ A +H H T+ T R DPR Sbjct: 61 LIRLDTGDTLLLHLGMSGRVLLSLPGDAP--VPDRHEHFFFETTDGT-----RCGLIDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL+ T+ + + L LGPEP N F+ +L ++ +++K ALL+Q +VAG+ Sbjct: 114 RFGAVDLMPTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALLDQTVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R +L +L+Q I+ VL +AI AGGSSLRDYV Sbjct: 174 GNIYVSEALFRAGIHPARLACTLDAAED------ARLVQAIRAVLREAIAAGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQ 288 DG +GYFQ+A+ VYG+ G+ C G + R+ QAGRS+F+C CQ Sbjct: 228 QPDGELGYFQHAWRVYGRAGQGCPDCPGPPACHGVERLEQAGRSSFFCPLCQ 279 >gi|38492995|pdb|1R2Y|A Chain A, Mutm (Fpg) Bound To 8-Oxoguanine (Oxog) Containing Dna gi|38492998|pdb|1R2Z|A Chain A, Mutm (Fpg) Bound To 5,6-Dihydrouracil (Dhu) Containing Dna Length = 274 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MP+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|161523697|ref|YP_001578709.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189351539|ref|YP_001947167.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|238687021|sp|A9AEZ2|FPG_BURM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160341126|gb|ABX14212.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] gi|189335561|dbj|BAG44631.1| formamidopyrimidine-DNA glycosylase [Burkholderia multivorans ATCC 17616] Length = 275 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPAGGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 112 RFGAVLWHSREAGDVHAHPLLASLGVEPFSPAFDGALLHRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAID GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLAEAVRATLADAIDRGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|254247180|ref|ZP_04940501.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] gi|124871956|gb|EAY63672.1| Formamidopyrimidine-DNA glycolase [Burkholderia cenocepacia PC184] Length = 331 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 57 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 116 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+HV + + + DPR Sbjct: 117 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHVDWIFDE------FVLRFRDPR 167 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 168 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 227 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 228 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 281 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 282 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 331 >gi|83720571|ref|YP_441036.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|167579767|ref|ZP_02372641.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis TXDOH] gi|167617843|ref|ZP_02386474.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis Bt4] gi|257140311|ref|ZP_05588573.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] gi|123538059|sp|Q2T1B3|FPG_BURTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83654396|gb|ABC38459.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis E264] Length = 276 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 149/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPADFAEMLRSREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWVFDE------FVLRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVRAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST+YC CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYYCPNCQR 276 >gi|475032|dbj|BAA05066.1| formamidopyrimidine-DNA glycosylase [Streptococcus mutans] Length = 273 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIVGKKIVSVEVRVPKMVKTGVEDFQLDILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNL-NRQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|288959514|ref|YP_003449855.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] gi|288911822|dbj|BAI73311.1| formamidopyrimidine-DNA glycosylase [Azospirillum sp. B510] Length = 280 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 120/295 (40%), Positives = 165/295 (55%), Gaps = 21/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R NLR FP F G+++ + RRAKY+ Sbjct: 1 MPELPEVETVCRGLAPHLEGRRLVHVEQRRPNLRTPFPPRFCERLTGRRVEALRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ +IVHLGMSG II + +P +H+HV T V +ND R Sbjct: 61 LMDLDDGGVLIVHLGMSGRMII---APERPAAFDKHDHVVFETDAGTI-----VTFNDAR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL +P LR LGPEP N+F+ L + K + +K ALL+Q IVAG+ Sbjct: 113 RFGLMDLTVADALADHPMLRNLGPEPLGNAFSGPELARRLAGKMTPIKAALLDQSIVAGL 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+++ + P R SL + +L ++ VL AI AGGSSLRDY Sbjct: 173 GNIYVSEALFQSGILPTRGAASLTGEE------VDRLAAAVRAVLERAIAAGGSSLRDYR 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCL------SNCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ+ F+VY + GE C + G ++RIVQ+GRSTF+C Q+ Sbjct: 227 QASGELGYFQHQFAVYDREGEGCPDCDCDRARTGG-VQRIVQSGRSTFFCAARQR 280 >gi|118594532|ref|ZP_01551879.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] gi|118440310|gb|EAV46937.1| formamidopyrimidine-DNA glycosylase [Methylophilales bacterium HTCC2181] Length = 271 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 161/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + L ++K TV I + +LR+ P + S G++I+++ RRAKY+ Sbjct: 1 MPELPEVEVTCQGLKPLLK-KTVHKIVIRNYSLRWPIPTNLSTVVEGQEILEIKRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I+HLGMSG I K +H+HV N + + YNDPR Sbjct: 60 LVRFSNG-TLILHLGMSGHLYIIPEGA----KPKKHDHVDFIFGN----ESVILRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T ++ L+ LGPEP ++ FNA YL + K+ +K+A+++ V G+ Sbjct: 111 RFGSI-LWTTDNPLEHRLLKNLGPEPLEDGFNAEYLGIRLRAKSQCIKSAIMDGHNVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P RK+ L + L L+ I+ V+ AI GGS++ D+ Sbjct: 170 GNIYASEALFYAGIKPQRKSSKLTKKE------LKALVTSIKDVINKAIVKGGSTMNDFF 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G GYFQN VYG+ G+ C C ++ +I RS+F+C CQK Sbjct: 224 DVNGENGYFQNEHKVYGRKGKDCY-QCDSLVLQITIGQRSSFFCNQCQK 271 >gi|323524676|ref|YP_004226829.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] gi|323381678|gb|ADX53769.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1001] Length = 276 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + P +H+HV + + + + DPR Sbjct: 61 LFETDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E +P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLAHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|332367335|gb|EGJ45070.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1059] Length = 274 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDGFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|91781717|ref|YP_556923.1| formamidopyrimidine-DNA glycosylase [Burkholderia xenovorans LB400] gi|122970731|sp|Q145W8|FPG_BURXL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91685671|gb|ABE28871.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia xenovorans LB400] Length = 276 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVEVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + Y DPR Sbjct: 61 LFEIDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRYRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPATAAGRVSLVR------YDLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|225856628|ref|YP_002738139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] gi|225725435|gb|ACO21287.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae P1031] Length = 274 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRGLEKLIIGKKISSIEIRYHKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFCLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHVFFRFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|295675408|ref|YP_003603932.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] gi|295435251|gb|ADG14421.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1002] Length = 276 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTATLRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + Y DPR Sbjct: 61 LFEIDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDD------FILRYRDPR 112 Query: 121 RFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++P L +LG EP +F+ + + ++K ALL IV Sbjct: 113 RFGAVLWHPREEGDILEHPLLASLGVEPFSPAFSGAQMHRLTRGRKVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AID GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YELLADAVRVTLAAAIDKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|163748879|ref|ZP_02156131.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] gi|161331653|gb|EDQ02458.1| formamidopyrimidine-DNA glycosylase [Shewanella benthica KT99] Length = 271 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPHLVGQEVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + I+HLGMSGS I S +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAGTT-IIHLGMSGSLRIVPKSTP----VEKHDHIDLELASGKILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWSELPEE-AHPLLSKLGPEPLKDDFTPKYLFDSLKNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L + L L+ +I+++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRLD------IERLTILVTDIKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ + R+T +C CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEVRLGQRATVFCGICQQ 270 >gi|119943846|ref|YP_941526.1| formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] gi|166198736|sp|A1SR12|FPG_PSYIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119862450|gb|ABM01927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychromonas ingrahamii 37] Length = 270 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + + N +V ++ L LR+ P + + K ++ + RRAKYL Sbjct: 1 MPELPEVETSRKGISPHLINKSVQNVVLRHTQLRWKIPQDLLSDIKDKILLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++++HLGMSGS I C +H+H + + + Y DPR Sbjct: 61 LFNFTSG-TLLIHLGMSGSLRI----CPLNSPPKKHDHADLIFADC------LLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + P L LGPEP ++ FNA YL Q K+ +K +++QK+V G+ Sbjct: 110 RFGAILWLGLTPEDS-PLLNKLGPEPLNDDFNAKYLYQQATKRKLPVKQFIMDQKVVTGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + +SPIR ++ + L+ EI+++L AI GG++L+D+V Sbjct: 169 GNIYATEALFNSGISPIRAAGNISEKRYQI------LVTEIKEILQQAIKQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYGKTG+ C +C ++ + A R++ YC CQ Sbjct: 223 GSDGKPGYFQQTLQVYGKTGQQC-PSCETPLKAVKLAARASVYCPECQ 269 >gi|322376465|ref|ZP_08050958.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] gi|321282272|gb|EFX59279.1| DNA-formamidopyrimidine glycosylase [Streptococcus sp. M334] Length = 274 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ ++ I + + F G+ + + RR KYL Sbjct: 1 MPELPEVETVRCGLEKLILGKKISSIEIRYHKMIKTDLDEFQKEVPGQVVELMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV I + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQAPE----RKHAHVLIHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + +GPEP + F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLSPDLLDAYFISKKIGPEPIEQDFDVQVFQAALTKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L + + VL A+D GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTVAEAI------AIHDQTIAVLSQAVDKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY K G+ C S CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGTMQDFHQVYDKAGQEC-SRCGTVIEKIQLGGRGTHFCPQCQR 272 >gi|119773259|ref|YP_925999.1| formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] gi|166198747|sp|A1S1S3|FPG_SHEAM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119765759|gb|ABL98329.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella amazonensis SB2B] Length = 271 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + ++ V + + NLR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVP-ELAQNIVGQTILGVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + K +H+H+ + + N + +NDPR Sbjct: 60 LIDTQAGTT-IVHLGMSGSLRV----LPKNTPVEKHDHIDLVMQNGRVLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +F+A YL K +K L++ IV G+ Sbjct: 110 RFGAWLWSELP-EAAHPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDNAIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L E++ +L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKVD------AERLTLLTAEVKTILTQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C CG ++ I R+T +C+ CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTE-CGHLLSEIRLGQRTTVFCSLCQ 269 >gi|297539278|ref|YP_003675047.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] gi|297258625|gb|ADI30470.1| formamidopyrimidine-DNA glycosylase [Methylotenera sp. 301] Length = 271 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ + V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTRRGLLP-LVGKVVKSVTIRHPTLRWPIPQSLLQILPNQVLRGLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + ++++HLGMSG + T+ +H+H I T+ + DPR Sbjct: 60 LCEYDTG-TLLLHLGMSGRVQLLDTN----YPAEKHDHFDIEFTDGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + + L +LGPEP + FNA YL K+ +KNA+++ +V G+ Sbjct: 110 RFGAVLWID-NKENHHVLLNSLGPEPLEEGFNAKYLHAALSNKSLVIKNAIMDGHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L KL+ EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPETAANKLTLRQ------CEKLVVEIKSTLNDALSAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+IGYFQ + VY +T EPC C + I+ I RSTFYC CQK Sbjct: 223 GVDGNIGYFQQEYFVYARTDEPC-KVCTKPIKCIRLGQRSTFYCEKCQK 270 >gi|300721240|ref|YP_003710510.1| formamidopyrimidine DNA glycosylase [Xenorhabdus nematophila ATCC 19061] gi|297627727|emb|CBJ88253.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Xenorhabdus nematophila ATCC 19061] Length = 269 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 145/288 (50%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNIIQYAEVRNSRLRWPVSEQIMK-LSDRPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + +H+HV + + + + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LLEERPPEKHDHVDLIMADGKTLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L LGPEP + F+ YL K + +K L++ K+V G+ Sbjct: 110 RFGA--WLWSDDLNKCSVLSHLGPEPLFDQFDGEYLYSLSRNKKTAIKPWLMDNKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL Q + L I+++L +I+ GG++L+D++ Sbjct: 168 GNIYANEALFVAHILPERPVHSLTQQEA------HLLADIIKQILHRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK GE C S CG+ I I RSTF+C CQ Sbjct: 222 QSDGKPGYFAQELFVYGKKGELC-SKCGEKIECIKLGQRSTFFCRQCQ 268 >gi|293556213|ref|ZP_06674803.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] gi|291601632|gb|EFF31894.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecium E1039] Length = 278 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ + + + F A+ G+ I + RR K+ Sbjct: 1 MPELPEVETVRKGLKRLVVGKTIQKVQVLWPKIIEQPETPIFEASLVGETIQSIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ +I HL M G + + +H HV + + + YND Sbjct: 61 LIFHLDH-YELISHLRMEGKYQFTKENTPID----KHTHVLFFFEDGSQLR-----YNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M +VE Y + LGPEP +SF + K + +K LL+Q++V G Sbjct: 111 RKFGRMTIVEKGASATYRGIMKLGPEPLPDSFLLADFANGLKKSHKAIKPLLLDQRLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + +L + VL AI+AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQPANTLRPKE------VEQLRLSVIDVLDRAIEAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A VY +TG+PC+ CG +I + A R T YC CQ+ Sbjct: 225 LNALGESGGFQVALHVYQQTGKPCI-RCGTLIVKTKVAQRGTHYCPNCQR 273 >gi|312864546|ref|ZP_07724777.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] gi|311099673|gb|EFQ57886.1| DNA-formamidopyrimidine glycosylase [Streptococcus downei F0415] Length = 273 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T+ + + L F G+ + + RR KYL Sbjct: 1 MPELPEVENVRRGLERQILGKTIKTVKVTYPKLVRTGVEDFQLLLPGQTVQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL G L II HL M G + + +H H + T+ T ++Y D R Sbjct: 61 IFELTGGL-IISHLRMEGKYFLFSDQLPTN----KHFHAFFTFTDGTT-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+ + S + Y + LGPEP +F + + +K+ LL+Q +VAG+ Sbjct: 111 KFGTMEYLPKSQEAAYFLSKKLGPEPTKETFKLAPFERTLVESHRPIKSYLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW AK+ P R++ SL + +L + ++L + I GGS++R Y Sbjct: 171 GNIYADEVLWAAKVHPERRSDSLRPAE------IKRLHDQTIRILQEGIKRGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ GE C S CG I +I GR + YC CQK Sbjct: 225 NTLGEDGSMQDFLEVYGREGELC-SRCGSTIEKIKVGGRGSHYCPKCQK 272 >gi|170691500|ref|ZP_02882665.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] gi|170143705|gb|EDT11868.1| formamidopyrimidine-DNA glycosylase [Burkholderia graminis C4D1M] Length = 276 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFETDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCGTPIRQIVQGQRSTYFCPTCQR 276 >gi|296161532|ref|ZP_06844337.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] gi|295888176|gb|EFG67989.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. Ch1-1] Length = 276 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG+ + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGRVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + Y DPR Sbjct: 61 LFEIDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHVDWIFDE------FILRYRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E ++P L LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLAGLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YDLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|220926795|ref|YP_002502097.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] gi|254789443|sp|B8IIZ9|FPG_METNO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219951402|gb|ACL61794.1| formamidopyrimidine-DNA glycosylase [Methylobacterium nodulans ORS 2060] Length = 297 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 123/299 (41%), Positives = 172/299 (57%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGACFSHVHLARPDLRFPLPERFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----------QHNHVTISLTNNTNTK 110 + +L ++I+HLGMSG F + + +H+HV+ +L+N Sbjct: 61 VADLSSGEALIMHLGMSGRFDVVLPDGRQVSPGDFYLEGAGARAKHDHVSFALSNGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV YND RRFGFMDLV + +G EP N + + F + + LK A Sbjct: 118 --RVTYNDVRRFGFMDLVPAAELATCRHFAGMGIEPLGNELSGEAVARLFRGRRTPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P +L G P L + I+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRARLHPETPAGALADAAGRPTKAARLLAEVIRDVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDYVH DG+ G FQ+AF VY + G C + C ++RR+VQ+GRSTF+C CQ Sbjct: 236 AGGSTLRDYVHTDGTKGAFQHAFRVYDREGLACTARGCRGVVRRVVQSGRSTFFCEVCQ 294 >gi|168483039|ref|ZP_02707991.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|172043411|gb|EDT51457.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae CDC1873-00] gi|332201436|gb|EGJ15506.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47368] Length = 274 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRSLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H H + ++Y D R Sbjct: 61 LFCLT-DKVLISHLRMEGKYFYYPDQ----VPERKHAHFFFRFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQIFQAALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARPSQTLTAEEAT------AIHDQTIAVLGQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQECV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|91775039|ref|YP_544795.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] gi|123254763|sp|Q1H3I3|FPG_METFK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91709026|gb|ABE48954.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylobacillus flagellatus KT] Length = 279 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L ++ TVT + + +R+ P H G +++++ RR KY+ Sbjct: 1 MPELPEVEVTRRGLEPLI-GATVTQAVIRQPAMRWPIPSHLPQVLHGARLLELRRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E +I+HLGMSG + + +H+H + + + DPR Sbjct: 60 IARFESGC-LILHLGMSGRLCLLESDT----FPEKHDHFDLHFADGRVMRM-----RDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L ++ L+ LG EP D +FN +L ++S +K +++ +V G+ Sbjct: 110 RFGAV-LWAGDQPDEHSLLKVLGQEPLDEAFNGEFLQQAIRTRSSPIKTVIMDSHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R+L +L++E++ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRAGIHPETPARALTLAQ------CRRLVEEVKLTLQDALQAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYFQ + VYG+TG+PC C I + RSTFYC CQ+ Sbjct: 223 GADGNPGYFQQTYFVYGRTGQPC-RVCQTPIAVLRLGQRSTFYCPACQQ 270 >gi|328946707|gb|EGG40845.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1087] Length = 274 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDVFIHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYLDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFILPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|46907795|ref|YP_014184.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47093101|ref|ZP_00230878.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] gi|67460686|sp|Q71ZA3|FPG_LISMF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46881064|gb|AAT04361.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes serotype 4b str. F2365] gi|47018541|gb|EAL09297.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes str. 4b H7858] Length = 273 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F + K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 273 >gi|313124191|ref|YP_004034450.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280754|gb|ADQ61473.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 273 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSQINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|254824377|ref|ZP_05229378.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] gi|293593612|gb|EFG01373.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-194] Length = 273 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG Sbjct: 111 RKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Y Sbjct: 171 VGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 225 VNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 273 >gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] gi|189044668|sp|A5D0T6|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum thermopropionicum SI] Length = 276 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + + +T + + K +R F KKI+ V RR KY Sbjct: 1 MPELPEVETVRRTLQAKLPGLKITGVEVLLPKVIRSPELSEFKETIADKKILKVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI L ++ VHL M+G + CA +H HV +L+N ++ + D Sbjct: 61 LLINLSEGYTLAVHLRMTGRLVY----CAGQDPPARHTHVIFNLSNG-----CQLHFADM 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T ++ LG EP + F +L + ++++ +K LL+Q +AG Sbjct: 112 RQFGRIWLVPTDALDGLKGIKELGVEPLEELFTREFLKKELRRRHARIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+++P R +L + +L + I+ +L + I+ G+++RD+ Sbjct: 172 LGNIYADEALHRARINPERLATTLTPRE------IARLYRAIRDLLQEGIENRGTTVRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G +Q VY + G+PC CG I + GRS++YC CQK Sbjct: 226 IDGNGQAGNYQEFLQVYNREGKPC-PRCGDKIAKKKVGGRSSYYCPTCQK 274 >gi|115352909|ref|YP_774748.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria AMMD] gi|115282897|gb|ABI88414.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia ambifaria AMMD] Length = 284 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 70 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 120 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 121 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 180 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 181 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 234 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 235 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 284 >gi|289666306|ref|ZP_06487887.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 271 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L R +LR+ P G I +V RRAKYL Sbjct: 1 MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIITNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S ++HLGMSGS + H+HV ISL N + +NDPR Sbjct: 61 LIDTDAGGSALLHLGMSGSLRVLPGDTLPRS----HDHVDISLQNGRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ S + L LGPEP ++F YL + + + +K L++Q +V G+ Sbjct: 112 RFGC--LLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRRAAVKTFLMDQAVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA +SP+R+ + D +L ++ +L AI GG++LRD++ Sbjct: 170 GNIYAAESLHRAGISPLREAGKVS------LDRYRRLADAVKDILAYAIQRGGTTLRDFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ +VYG+ GEPC CG++++ R+T +C CQ+ Sbjct: 224 SPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWCGSCQR 271 >gi|146319050|ref|YP_001198762.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|146321256|ref|YP_001200967.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|145689856|gb|ABP90362.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 05ZYH33] gi|145692062|gb|ABP92567.1| Formamidopyrimidine-DNA glycosylase [Streptococcus suis 98HAH33] gi|292558695|gb|ADE31696.1| Formamidopyrimidine-DNA glycolase [Streptococcus suis GZ1] Length = 297 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 17/287 (5%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYLL Sbjct: 24 PELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 I L + +I HL M G + A + +H H + + + ++Y D R+ Sbjct: 84 IYLTDH-VLISHLRMEGKYNFF----ADQVPANKHFHAFFTFIDGST-----LVYQDVRK 133 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+G Sbjct: 134 FGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGLG 193 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E L++AK+ P + + L D + L Q +VL I+ GGS++R Y + Sbjct: 194 NIYVDEVLFKAKVHPAQTSNQLS------TDQVADLRQATIEVLQLGIEKGGSTIRTYKN 247 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 248 ALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|187922596|ref|YP_001894238.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] gi|238689469|sp|B2SXG9|FPG_BURPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187713790|gb|ACD15014.1| formamidopyrimidine-DNA glycosylase [Burkholderia phytofirmans PsJN] Length = 276 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRKVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+H+ + + Y DPR Sbjct: 61 LFEIDAGWF-IVHLGMTGTLRVLRH-VPHPPAAAKHDHIDWIFDE------FILRYRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E ++P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLEHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YELLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G PC CG I++IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGLPC-RVCGTPIKQIVQGQRSTYFCPTCQR 276 >gi|157150267|ref|YP_001450016.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] gi|157075061|gb|ABV09744.1| formamidopyrimidine-DNA glycosylase [Streptococcus gordonii str. Challis substr. CH1] Length = 274 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VMVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL+Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFVAALSRSKKPIKPYLLDQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWR ++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRVRIHPARPAASLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGNPIEKIKLGGRGTHLCPHCQK 272 >gi|170724448|ref|YP_001758474.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] gi|238688687|sp|B1KL38|FPG_SHEWM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169809795|gb|ACA84379.1| formamidopyrimidine-DNA glycosylase [Shewanella woodyi ATCC 51908] Length = 271 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGVSPYLIDQEVTGLTVRNASLRWPVP-DLAQQIVGQTIRSVHRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS + + +H+H+ +SL + + +NDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRVV----TELTPVEKHDHIDLSLASGKILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++FN YL K +K L++ IV G+ Sbjct: 110 RFGAWLWYELPID-AHPLLSKLGPEPLTDAFNPSYLFESLKGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + Q + L L+ E++++L +AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQMEAGKVDQ------ERLIILVSEVKQILANAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGESC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|300811969|ref|ZP_07092427.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497048|gb|EFK32112.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 274 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEGFVKIKISGRGTTYCLHCQK 272 >gi|206559200|ref|YP_002229961.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] gi|238693090|sp|B4EAR7|FPG_BURCJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198035238|emb|CAR51112.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia J2315] Length = 275 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG IR+IVQ RST+YC CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPIRQIVQGQRSTYYCPTCQR 275 >gi|262282702|ref|ZP_06060470.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] gi|262261993|gb|EEY80691.1| formamidopyrimidine-DNA glycosylase [Streptococcus sp. 2_1_36FAA] Length = 274 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVDKTIEQVQVRYAKMIGTGVDSFIHDLPGQAIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPSRPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I +GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLSGRGTHLCPHCQK 272 >gi|301794108|emb|CBW36514.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae INV104] gi|332204973|gb|EGJ19038.1| formamidopyrimidine-DNA glycosylase [Streptococcus pneumoniae GA47901] Length = 274 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ ++ I + + F + I + RR KYL Sbjct: 1 MPELPEVETVCRCLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G + + +H HV + ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYFYYPDQGPE----RKHAHVFFHFEDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ L Y + LGPEP++ F+ K +K+ LL+Q +VAG+ Sbjct: 111 KFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +++L T + + VL A++ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQVHPARSSQTLTAEEAT------AIHDQTIAVLSQAVEKGGSTIRTYT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VY KTG+ C+ CG +I +I GR T +C CQ+ Sbjct: 225 NAFGEDGSMQDFHQVYDKTGQGCV-RCGTIIEKIQLGGRGTHFCPNCQR 272 >gi|294055081|ref|YP_003548739.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] gi|293614414|gb|ADE54569.1| formamidopyrimidine-DNA glycosylase [Coraliomargarita akajimensis DSM 45221] Length = 269 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 157/289 (54%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + + + + LR+ P A G +I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGISPHVEGRLIVALHVRQPKLRWLVPELIQQAV-GHRILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ E SI++HLGMSGS I+ A +H+HV + L + + NDPR Sbjct: 60 ILDTEVG-SIVLHLGMSGSLTIQPAGKAPT----KHDHVDLVLEDGNCLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L+ LGPEP + F+ L K++ +KN +++ +V G+ Sbjct: 110 RFGACLWQASGETLE--LLQGLGPEPLTDDFDGERLYQLSRKRSGAVKNFVMSNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P + L + +L + I++VL AI+ GG++LRD++ Sbjct: 168 GNIYANEALFMSGIDPRKPAGKLSRAR------CDRLAESIKQVLARAIEKGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ SVYGK GEPC CG +I+ R++FYC+ CQ+ Sbjct: 222 GADGKPGYFRIELSVYGKAGEPC-PKCGNLIQSRTIGQRNSFYCSNCQR 269 >gi|125623242|ref|YP_001031725.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris MG1363] gi|55669903|pdb|1TDZ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|124492050|emb|CAL96978.1| Fpg protein [Lactococcus lactis subsp. cremoris MG1363] gi|300069992|gb|ADJ59392.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris NZ9000] Length = 272 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ + ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPR----EKHDHLTMKFADG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|329847536|ref|ZP_08262564.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] gi|328842599|gb|EGF92168.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis biprosthecum C19] Length = 286 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 116/294 (39%), Positives = 164/294 (55%), Gaps = 13/294 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + ++D+ LHR NLR+ FP F+ G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEPYLDTAILSDVELHRPNLRYPFPERFADQLNGATVLRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI-----KNPQHNHVTISLTNNTNTKKYRVI 115 L L+ + HLGM+G F +E + + +H HV+ T + +K + Sbjct: 61 LFHLDIQKIWVTHLGMTGRFQVEQQALDGNYYHAVDTDSKHRHVSAIATRDGVARK--LE 118 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + DPRRFGFM L+ + Y ++LG EP ++ + YL + +NLK L+ Q Sbjct: 119 FFDPRRFGFMLLLTPAELYATSWYQSLGVEPLSDALSPAYLLDMARDRKTNLKALLMAQG 178 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIYVCEALWRAKLSP R L + L I+ VL +A+ AGGSS Sbjct: 179 GIAGLGNIYVCEALWRAKLSPDRPAGKLTPKDA------EALTDAIKTVLEEAVAAGGSS 232 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D+ G +G FQ++F VY + G+PC G +I R V GRSTF+C CQ+ Sbjct: 233 ISDFTAATGELGLFQHSFCVYDRKGQPCRREDGGIIERKVHQGRSTFFCPKCQR 286 >gi|296283099|ref|ZP_06861097.1| formamidopyrimidine-DNA glycosylase [Citromicrobium bathyomarinum JL354] Length = 271 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 120/289 (41%), Positives = 166/289 (57%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + ++N T+T R ++R FP A G ++ + RRAK+ Sbjct: 1 MPELPEVETTVRGLALHLENRTITAARTARPDMRRPFPEGLEQALVGARVTSLGRRAKFG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + + ++I HLGMSG + I+ P + +H+H+ I T+ R NDPR Sbjct: 61 LIHTDRDQTLIFHLGMSGRWRID------PEQPDRHDHLLIE------TESNRFALNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DLV+T+ +P T+GPEP A +L + +K LL+Q+IVAG+ Sbjct: 109 RFGWVDLVDTAALDAWPSFVTMGPEPLGPDLTAAHLRAALAGRRQAIKLLLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWRA++SP R + L +L+ I++VL +I GGS+LRDY Sbjct: 169 GNIYVCEALWRARISPKRAGGRVSLA------ALERLVTAIREVLEQSIRDGGSTLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G I RI Q GRST+YC CQ+ Sbjct: 223 RPDGELGYFSTRFDVYGRTGESCRREDGGHIARIEQGGRSTWYCPVCQR 271 >gi|299822774|ref|ZP_07054660.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] gi|299816303|gb|EFI83541.1| DNA-(apurinic or apyrimidinic site) lyase [Listeria grayi DSM 20601] Length = 273 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T+ + +H + P F G++I V RR K+ Sbjct: 1 MPELPEVENVRTTLERQVIGKTIDQVIVHVPKMIHGLPADEFVHMLVGQEIEAVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L + +I+ HL M G F + + +H H+ T+ T + + D Sbjct: 61 LLFDLT-DCTILSHLRMEGKFRVYPETEPTT----KHTHIIFHFTDQTELR-----FLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + L+ LGPEP F + K +K ALL+QK+VAG Sbjct: 111 RKFGTMQVAAKHQEETTNSLQKLGPEPLSAHFELAAFASKLKKTTRAVKTALLDQKLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + A++ P+R L + L + +K++ A++AGGSS+R Y Sbjct: 171 VGNIYADEICFEAEVLPMRGGNELSDAE------VAALYEATKKIIGIAVEAGGSSIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +Q+ VYG+TGE CL CG + +I GR T +C CQK Sbjct: 225 ENSQGKKGNYQDFLKVYGRTGEKCL-RCGGTVEKIKLNGRGTHFCRGCQK 273 >gi|223932651|ref|ZP_03624650.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] gi|223898621|gb|EEF64983.1| formamidopyrimidine-DNA glycosylase [Streptococcus suis 89/1591] Length = 297 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 17/287 (5%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L ++K ++ + + + F G++I+DV RR KYLL Sbjct: 24 PELPEVETVRRGLNRLVKGKIISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYLL 83 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 I L + +I HL M G + +H H + ++ + ++Y D R+ Sbjct: 84 IYLTDH-VLISHLRMEGKYNFFPDQVPAN----KHFHAFFTFSDGST-----LVYQDVRK 133 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG M+L+ + Y R +GPEP + F+ + K +K+ LL+Q +VAG+G Sbjct: 134 FGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSRKPIKSHLLDQSLVAGLG 193 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E L++AK+ P + + L + L Q +VL I+ GGS++R Y + Sbjct: 194 NIYVDEVLFKAKVHPAQTSNQLSAEQ------VADLRQATIEVLQLGIEKGGSTIRTYKN 247 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q+ VYGKTG+ C C I +I GR T +C CQ Sbjct: 248 ALGMDGTMQDYLQVYGKTGQAC-PRCQTEIVKIQLGGRGTHFCPKCQ 293 >gi|229062270|ref|ZP_04199591.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] gi|228716998|gb|EEL68679.1| Formamidopyrimidine-DNA glycosylase [Bacillus cereus AH603] Length = 276 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + D+ + + R D F RG+ I ++ RR K Sbjct: 1 MPELPEVENVRRTLENLVTGKVIEDVIVTYPKIVKRPDDAEIFKDMLRGEMIENIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL+ + N I+ HL M G F++ +H HV + T + Y D Sbjct: 61 FLLLYVT-NYVIVSHLRMEGKFLLHQEDEPID----KHTHVRFLFKDGTE-----LHYKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + ++ PL LGPEP D YL + K N +K LL+Q+++ Sbjct: 111 VRKFGTMHLFKKGEEFTQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R+++ P R+ SL + + ++ + I L +A+ GGS++R Sbjct: 171 GLGNIYVDEVLFRSQIHPEREAASLTEEE------IERIYEAIVTTLGEAVKRGGSTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G IG FQ +VYGK GEPC++ CG ++ + V GR T YC CQ Sbjct: 225 YINSQGQIGSFQELLNVYGKKGEPCVT-CGTLLEKTVVGGRGTHYCPICQ 273 >gi|290580027|ref|YP_003484419.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] gi|254996926|dbj|BAH87527.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus mutans NN2025] Length = 272 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEHLIAGKKIVSVEVRVPKMVKTGVEDFQLGILGQTFESIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +II HL M G +++ + + +H H+ L + ++Y D R Sbjct: 61 LLNL-NRQTIISHLRMEGKYLLFEDE----VPDNKHFHLFFGLDGGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S Y + +GPEP F K + +K LL+Q +VAG+ Sbjct: 111 KFGTFELLPKSQVEAYFVQKKIGPEPNAKDFKLKPFEEGLAKSHKVIKTLLLDQHLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L + + ++ E ++L AI+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVDPERLASQLKTSE------IKRIHDETIRILQLAIEKGGSTIRSYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKT +PC C I +I GR T +C CQK Sbjct: 225 NSLGEDGSMQDCLQVYGKTDQPCA-RCATPIEKIKVGGRGTHFCPSCQK 272 >gi|114321796|ref|YP_743479.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] gi|122310767|sp|Q0A598|FPG_ALHEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114228190|gb|ABI57989.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Alkalilimnicola ehrlichii MLHE-1] Length = 277 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ VT + + + LR+ P A G+ I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPLLEGRRVTGMTVRQARLRWPVPAGLPDAITGQTIRAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK--PIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L ++I+HLGMSGS + A + +H+HV + L + + + Y D Sbjct: 61 LFRTPAG-TLILHLGMSGSLRVIPGQQAGACAVPPGRHDHVDLRLADGSCLR-----YTD 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + T + L LGPEP D +F+ L + +++K +++ IV Sbjct: 115 PRRFGSLHWC-TGEPEAHWLLHRLGPEPFDTAFDGDRLHRLSRGRRTSVKAFIMDSGIVV 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P R + +L +++VL +AI AGG++LRD Sbjct: 174 GVGNIYASESLFRAGIHPGRPAGRVGLAR------YRRLAGAVREVLAEAIAAGGTTLRD 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF +VYG+ G PC CG+ IR+ A RST+YC CQ+ Sbjct: 228 FTASDGRPGYFAQTLNVYGRAGAPC-PRCGRSIRQRRIAQRSTWYCPGCQR 277 >gi|332995179|gb|AEF05234.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas sp. SN2] Length = 269 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + N T+ +I + + +R+ P A G+K+I V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPYLLNETIDNIIVRERRMRWPVPED-VALAIGQKVIAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +IE E ++I+HLGMSG + S +H+HV I + + +NDPR Sbjct: 60 MIETEAG-TLILHLGMSGKLRVIDASTP----VAKHDHVDIVMATGKCLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L LGPEP + F+ L K S +KN +++ +V G+ Sbjct: 110 RFGAFLWQPPGE--ALKLLANLGPEPLTDDFDDRRLFTLSRGKKSTVKNFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + L Q I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRREAGKVSSTR------YKNLTQIIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF +VYG+ GEPC C I+ V R+TF+C CQ+ Sbjct: 222 QTDGNPGYFAQHLNVYGRKGEPC-EVCKTEIQSKVIGQRNTFFCKQCQR 269 >gi|328957054|ref|YP_004374440.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] gi|328673378|gb|AEB29424.1| formamidopyrimidine-DNA glycosylase [Carnobacterium sp. 17-4] Length = 278 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 153/291 (52%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH--HFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ + ++ + F G+KI++ RR K Sbjct: 1 MPELPEVETVRKGLEKLVSEATIESVDIYWDRIISGPIETTEFKRILMGEKIMEFDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++I +++ HL M G + +E +S +H HV L + + + Y D Sbjct: 61 YIIIRF-KQWALVSHLRMEGKYEVEESSAPLK----KHTHVVFHLADGRDLR-----YLD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M LV ++ ++ LGPEP +F+ K +K LL+QKIVA Sbjct: 111 VRKFGRMTLVPIGEEFTATGIKLLGPEPTVETFDEAIFYKTLQTKKRAIKPLLLDQKIVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ AK+ P+R SL +N + L + I KVL DA++AGG+++R Sbjct: 171 GLGNIYVDEALFLAKMHPLRTANSLQKNE------VSLLHEAIIKVLGDAVEAGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G FQ SVYGK G PC+ CG I +I A R T +C CQ+ Sbjct: 225 YQNALGEAGSFQVKLSVYGKKGLPCI-RCGTPIEKIKVAQRGTHFCPNCQR 274 >gi|302188125|ref|ZP_07264798.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + FN L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFNGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRAR------YLKLAIEIKRILAYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 270 >gi|300859742|ref|ZP_07105830.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] gi|300850560|gb|EFK78309.1| DNA-formamidopyrimidine glycosylase [Enterococcus faecalis TUSoD Ef11] Length = 280 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F + I + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLASQTIEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPAE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|297569572|ref|YP_003690916.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] gi|296925487|gb|ADH86297.1| formamidopyrimidine-DNA glycosylase [Desulfurivibrio alkaliphilus AHT2] Length = 305 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 23/301 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + I LR P G ++ VSRRAKY Sbjct: 1 MPELPEVEVVRRGLEPLVLQRQIARISASGLPLRRPVPLAELRRWGEGARVTGVSRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN----------T 109 LL+ L+ + +I HLGM+G F +H+H+ + L ++ N Sbjct: 61 LLLHLDNSALLIFHLGMTGKFY----PAVADDPPRKHDHLVLHLNDHANDGHGGRGASGQ 116 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLK 168 K ++ +ND RRFG + + + L LGPEP D+ +F YL + + + +K Sbjct: 117 KVAQIRFNDCRRFGLVAVCAPAETTAPALLAGLGPEPLDDKAFTPAYLAQRCAHRRTPIK 176 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 N L++ ++V GIGNIY E L+ A + P + + L K+ +++L A Sbjct: 177 NLLMDNRVVVGIGNIYANEVLFAAGVHPQTPAGEISRAR------LKKICAAAREILTRA 230 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I AGG+++ D+ + G GYFQ +VYG+ G+PC CG+ I R VQAGR+T++C CQ Sbjct: 231 IAAGGTTIADFANAAGESGYFQVQLAVYGRGGQPC-PRCGREIVRQVQAGRATYFCPRCQ 289 Query: 289 K 289 + Sbjct: 290 R 290 >gi|170734143|ref|YP_001766090.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] gi|169817385|gb|ACA91968.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia MC0-3] Length = 327 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 53 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 112 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 113 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 163 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 164 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 223 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 224 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 277 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 278 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 327 >gi|332358722|gb|EGJ36545.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK355] Length = 274 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLKRLVVGKTIGQVRIRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADSLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|260774463|ref|ZP_05883377.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] gi|260610590|gb|EEX35795.1| formamidopyrimidine-DNA glycosylase [Vibrio metschnikovii CIP 69.14] Length = 269 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+ I + LR+ PH + G++I +SRRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQTIATITWRCEKLRWPIPHELTH-LEGQQITAISRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE E + I+HLGMSG+ + +H+HV + L N + Y+DPR Sbjct: 60 FIETEAGNA-IIHLGMSGALRVLDAD----FPAGKHDHVDLVLANGK-----LLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P L +GPEP ++FNA + + + K +K +++ K V G+ Sbjct: 110 RFGAWLYIAPGE--SHPLLEHMGPEPLTDAFNAETIAKRANNKRLAIKAFIMDNKNVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++AK+ P+R +SL L+ EI+ VL AI GG++L+D+ Sbjct: 168 GNIYANESLFKAKIHPLRPAQSLSDTE------WQCLVSEIKAVLATAIAQGGTTLKDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYGK G+PC C + I A R++ +C +CQ Sbjct: 222 QADGKPGYFAQELQVYGKGGKPC-PICAEPILEQKIAQRNSMFCNHCQ 268 >gi|325982090|ref|YP_004294492.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] gi|325531609|gb|ADZ26330.1| formamidopyrimidine-DNA glycosylase [Nitrosomonas sp. AL212] Length = 276 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 157/289 (54%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + ++ + LR+ P + A G I V+RRAKYL Sbjct: 1 MPELPEVETTGRGIAPHVTGQVIANVIIRNSMLRWPIPENLPALLPGLTIQTVTRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK-PIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ ++I HLGMSGS + + P +H+H + L N T + +DP Sbjct: 61 LLDCGKG-ALIFHLGMSGSLRVLLPELIQLPEFPRKHDHFDLILNNQTVLR-----LHDP 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L Q+P L LGPEP F+A YL + + +K L+N +IV G Sbjct: 115 RRFGAV-LWHVGNIAQHPLLMNLGPEPLTADFSAQYLFRETRGLRACIKQTLMNSRIVVG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A ++P + KL+Q ++ L AI+AGGSSLRD+ Sbjct: 174 IGNIYANEALYLAGINPKVTAGRIGIGR------YEKLVQAVKHTLQLAIEAGGSSLRDF 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VH DG+ GYFQ + VYG++G+ C C +I++I Q RS+FYC+ CQ Sbjct: 228 VHSDGTRGYFQQQYWVYGRSGKRC-KQCSNIIKQIKQGQRSSFYCSGCQ 275 >gi|332687081|ref|YP_004456855.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] gi|332371090|dbj|BAK22046.1| formamidopyrimidine-DNA glycosylase [Melissococcus plutonius ATCC 35311] Length = 274 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+KI + RR K+ Sbjct: 1 MPELPEVETVRKGLTQLVVGKTICEVAVLWSRIIEQPEVETFQKQLIGQKIKRIDRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + + K +H HV + ++++ + Y D Sbjct: 61 LIFKLT-NWDLISHLRMEGKY----ETHQKDDPITKHTHVIFTFSDDSQLR-----YLDI 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M L+ +Y + LGPEP +F+ K + +K LL QK+V G Sbjct: 111 RKFGRMALIPKDKSNEYKGIALLGPEPTLETFHVEEFQKNLAKYHKAIKPLLLEQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + + +L + I +L A+ AGG+++R Y Sbjct: 171 LGNIYVDEALWTAKIHPEKPANTLSVSE------VNRLHKAIIDILTQAVKAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+ +PC C I++I A R T +C +CQK Sbjct: 225 LNALGEAGTFQLALNVYGQKDKPCA-CCATPIQKIKVAQRGTHFCPHCQK 273 >gi|325687307|gb|EGD29329.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK72] Length = 274 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDE----VPECKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P+R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPVRPAASLKPAE------VRRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|23099617|ref|NP_693083.1| formamidopyrimidine-DNA glycosylase [Oceanobacillus iheyensis HTE831] gi|29611715|sp|Q8EPE6|FPG_OCEIH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22777847|dbj|BAC14118.1| formamidopyrimidine-DNA glycosidase [Oceanobacillus iheyensis HTE831] Length = 280 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+ L + + N T+ I + N+ D F A G+ I + R+ K Sbjct: 1 MPELPEVETIKETLKLFVCNKTIKHIDIEWPNMIKHPDDVEEFKALVTGQTIRSMGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ +I HL M G + + S P+K +H HVT +N + YND Sbjct: 61 FLLFYLD-EYVLISHLRMEGKYSVH--SPGDPVK--KHTHVTFYFSNGEELR-----YND 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + ++ + PL LGP+P D SFN Y + + + +K ALL+Q IV Sbjct: 111 VRKFGTMHVYPIGEEFMHKPLNQLGPDPFDTSFNLEYFYEKLKRTDRYIKTALLDQSIVT 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P+++ L + + KL ++ L DAI AGG+++R Sbjct: 171 GLGNIYVDETLFRANVHPLKRCSKLSKQE------VKKLQINAKETLRDAIKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ VYG+ +PC CG I +I GR T C CQ Sbjct: 225 YVNTQGDMGMFQQDLYVYGQHSKPC-RVCGADIIKIKVGGRGTHLCPTCQ 273 >gi|125718413|ref|YP_001035546.1| formamidopyrimidine-DNA glycosylase [Streptococcus sanguinis SK36] gi|125498330|gb|ABN44996.1| Formamidopyrimidine-DNA glycosylase, putative [Streptococcus sanguinis SK36] Length = 274 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIEQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDE----VPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ + Y R LGPEP F ++ +K LL Q +V G+ Sbjct: 111 KFGTMELLRKNQLETYFTARKLGPEPTAADFLLPPFVAALNRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKKGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|194466652|ref|ZP_03072639.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] gi|194453688|gb|EDX42585.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri 100-23] Length = 276 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGKYYNQPIGGPID----KHTHVVFEFTDGTE-----LCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L N + +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPRCQ 272 >gi|256847514|ref|ZP_05552960.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] gi|256716178|gb|EEU31153.1| formamidopyrimidine-DNA glycosylase [Lactobacillus coleohominis 101-4-CHN] Length = 277 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 137/288 (47%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L + + I ++ + F A G+ I V RR KYL Sbjct: 1 MPEMPEVETVRRGLNEIADGQQIIGIDVNYGKTIENDVEGFREALVGQTIEHVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M GS+ + T + +H HV N T+ + Y D R Sbjct: 61 LFRFSNHLTMISHLRMEGSYFKQKTG----MPVDKHTHVIFHFKNGTD-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV T + Y LRT+GPEP + F Y HK +K LLNQ VAG+ Sbjct: 112 KFGRMRLVTTGEEMNYGGLRTIGPEPTEQDFKLDYFERILHKSRGKIKPFLLNQSHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P + +L L + I K + A + G+++ Y Sbjct: 172 GNIYCDEVLWMSKINPEQAANTLTHEQA------KTLRENIIKEIATATEHKGTTVHTYK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ Y GE C CG + +I A R T YC +CQ Sbjct: 226 NAFGDAGGFQDYLKAYDHGGEKC-PRCGTKMVKIKVAQRGTTYCPHCQ 272 >gi|88801019|ref|ZP_01116568.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] gi|88776222|gb|EAR07448.1| formamidopyrimidine-DNA glycosylase [Reinekea sp. MED297] Length = 282 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/284 (36%), Positives = 159/284 (55%), Gaps = 18/284 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N T++ + + LR+ P TR ++++ VSRR+KY+ Sbjct: 1 MPELPEVETTCRGIEPHLNNRTISRVTVRDARLRWPIPPELDDWTRDQRVLGVSRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+LE ++IVHLGMSGS + +H+HV + L N R+ YNDPR Sbjct: 61 LIQLERG-TLIVHLGMSGSLRVLLDDPT----PGKHDHVDVELDNG-----VRLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + Q+ + LGPEP + F+ YL K+ + +K+ +++ +IV G+ Sbjct: 111 RFGA-WLYTEAPLEQHELIAHLGPEPLTDDFSVDYLWAMSRKRKTKIKSFIMDARIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P + + + +L+ I++VL AI+ GG++LRD+V Sbjct: 170 GNIYANEALFLSGIYPHKLAGKITRAE------CERLVANIKQVLALAINQGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 DG GYF + +VYG++GE C CG +IR + RST +C Sbjct: 224 GGDGKPGYFAQSLNVYGRSGELC-RQCGTVIRELRTNNRSTCFC 266 >gi|209966315|ref|YP_002299230.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] gi|229541080|sp|B6IVU4|FPG_RHOCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|209959781|gb|ACJ00418.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum centenum SW] Length = 290 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 131/299 (43%), Positives = 175/299 (58%), Gaps = 19/299 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M + + + +R +LRF P F+A G ++ + RRAKYL Sbjct: 1 MPELPEVETVRRGLEMKIAGRVLVRVAQYRPDLRFPLPERFAARLTGLRVAGLFRRAKYL 60 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN-TNTKKYRVI 115 LI LEG L +VHLGMSG+ ++ P H+H+ + + V Sbjct: 61 LIRLEGSAEGPLVWLVHLGMSGTLVVRRGPPGPPGP---HDHLVFETDPPPGEAQGWVVT 117 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 YND RRFGFMDL +L +P L LGPEP N F+A L+ + K + +K ALL+Q Sbjct: 118 YNDVRRFGFMDLFPEALLDSHPMLACLGPEPLGNGFDAEELSRRLAGKITPIKAALLDQT 177 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIYVCE+L+RA +SP R ++ +L+ I+ VL +AI AGGSS Sbjct: 178 VVAGLGNIYVCESLFRAGISPRRLAHTVAGRRAG------RLVPAIRDVLTEAIAAGGSS 231 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-----RIVQAGRSTFYCTYCQK 289 LRDYV DG +GYFQ++F VYG+ GEPC +R RIVQ+GRSTFYC Q+ Sbjct: 232 LRDYVQSDGELGYFQHSFKVYGREGEPCPGCDCDPVRTGGIARIVQSGRSTFYCPRHQR 290 >gi|85709426|ref|ZP_01040491.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] gi|85688136|gb|EAQ28140.1| formamidopyrimidine-DNA glycosylase [Erythrobacter sp. NAP1] Length = 271 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 159/289 (55%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + + + L+R +LR FP G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLARFLDGERIERVTLNRPDLRRPFPPELVQVMTGATVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L+ ++I HLGMSG + I+ P + +H+H+ + +R DPR Sbjct: 61 LIHLDRGATMIFHLGMSGRWRID------PEEADRHDHLLME------AAGHRFALCDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DL +T +P +GPEP F + L K+ ++K LL+Q+IVAG+ Sbjct: 109 RFGSVDLEQTDALDTWPQFAAMGPEPLGPDFTSEKLKSALKGKSQSIKLCLLDQRIVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEALWR+ + P++ + + L +L+ I+ VL +I GGSSLRDY Sbjct: 169 GNIYVCEALWRSGIHPLKAGGKVTRPQ------LARLVPAIRDVLTASIKDGGSSLRDYA 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF F VYG+TGE C G IRRI Q GRST+YC CQ+ Sbjct: 223 APDGELGYFATRFDVYGRTGELCRREDGGKIRRIAQGGRSTWYCAKCQR 271 >gi|329117411|ref|ZP_08246128.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] gi|326907816|gb|EGE54730.1| DNA-formamidopyrimidine glycosylase [Streptococcus parauberis NCFD 2020] Length = 274 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +++ ++ + + N+ F A +G+ I VSRR KYL Sbjct: 1 MPELPEVETVRRGLEQLVRGKVISQVTVKVPNMVKYDCLAFELALKGQTIEAVSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G L +I HL M G +++ + + +H HV + T+ + ++Y D R Sbjct: 61 IFDL-GQLVMISHLRMEGKYLLFND----FVPVNKHFHVFFTFTDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+E S ++ + +GPEP F +K LL+Q +VAG+ Sbjct: 111 KFGTFNLIEKSQLDRFFLEKKIGPEPTKADFKLKPFERALLSSQKIIKPWLLDQSLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P++ + SL + + ++ + +L ++ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPMKLSNSLKKAE------IKRIHDQAIAILALGVEMGGSTVRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ +PC CG I++I AGR T +C CQK Sbjct: 225 NTLGMNGSMQDYLMVYGQKDKPC-PRCGTAIQKIKVAGRGTHFCPRCQK 272 >gi|22537632|ref|NP_688483.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|25011596|ref|NP_735991.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae NEM316] gi|76788529|ref|YP_330125.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77405216|ref|ZP_00782314.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] gi|77408547|ref|ZP_00785283.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77411672|ref|ZP_00788011.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77414744|ref|ZP_00790872.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|54037119|sp|P64153|FPG_STRA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040773|sp|P64152|FPG_STRA3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101319|sp|Q3K028|FPG_STRA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22534518|gb|AAN00356.1|AE014260_12 formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 2603V/R] gi|24413135|emb|CAD47213.1| Unknown [Streptococcus agalactiae NEM316] gi|76563586|gb|ABA46170.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae A909] gi|77159211|gb|EAO70394.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae 515] gi|77162244|gb|EAO73216.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae CJB111] gi|77172821|gb|EAO75954.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae COH1] gi|77176218|gb|EAO78989.1| formamidopyrimidine-DNA glycosylase [Streptococcus agalactiae H36B] Length = 273 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + + F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G + ++ HL M G +++ + + +H H+ LTN + ++Y D R Sbjct: 61 LFDF-GEMVMVSHLRMEGKYLLFPNK----VPDNKHFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L ++ + L +EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKIHPQRLANQLTESETS------LLHKEIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|157373258|ref|YP_001471858.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] gi|157315632|gb|ABV34730.1| DNA-formamidopyrimidine glycosylase [Shewanella sediminis HAW-EB3] Length = 273 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + T + + +LR+ P + G+ I +V RRAKYL Sbjct: 3 MPELPEVEVTRQGITPHLVDQQATALTVRNASLRWPVP-DIAQQIVGETIRNVRRRAKYL 61 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I ++ +H+H+ + L + + +NDPR Sbjct: 62 LIDTDAGTT-IVHLGMSGSLRIV----SRNTPVEKHDHIDLELASGKILR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 112 RFGAWLWCELPEE-AHPLLSKLGPEPLKDGFNPTYLEQILKNKKKAIKLCLMDNHIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + ++ + L L+ E++++L +AI GG++L+D+ Sbjct: 171 GNIYANEALFAAGIHPETQAGNVD------TERLTILVTEVKQILANAIKQGGTTLKDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 225 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 271 >gi|227543927|ref|ZP_03973976.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300909676|ref|ZP_07127137.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] gi|227186078|gb|EEI66149.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri CF48-3A] gi|300893541|gb|EFK86900.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri SD2112] Length = 276 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I +V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGKYYNQPIGGPID----KHTHVVFEFTDGTE-----LCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTAELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L + T +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTASQIT------ELRKNIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|24376198|ref|NP_720242.1| formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] gi|29611714|sp|Q8E8D9|FPG_SHEON RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24351249|gb|AAN57685.1|AE015904_8 formamidopyrimidine-DNA glycosylase [Shewanella oneidensis MR-1] Length = 271 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAASLAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C + CG ++ I R+T +C+ CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCSICQ 269 >gi|148544470|ref|YP_001271840.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri DSM 20016] gi|184153835|ref|YP_001842176.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227363102|ref|ZP_03847237.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|325682792|ref|ZP_08162308.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] gi|148531504|gb|ABQ83503.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus reuteri DSM 20016] gi|183225179|dbj|BAG25696.1| formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri JCM 1112] gi|227071820|gb|EEI10108.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus reuteri MM2-3] gi|324977142|gb|EGC14093.1| DNA-formamidopyrimidine glycosylase [Lactobacillus reuteri MM4-1A] Length = 276 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I ++ + F A G+ I ++ RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAKRKINAIDVYYGKTITNDVEDFRQALIGQTIENIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + + +H HV T+ T + Y D R Sbjct: 61 LFRFTNDLTMISHLRMEGRYYNQPIGGPID----KHTHVVFEFTDGTE-----LCYQDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP +++F Y T + K +K LLNQ+ VAG+ Sbjct: 112 KFGRMTLVKTGDEMNVGGLKTIGPEPTEDAFTLPYFTTELKKSRGKIKPFLLNQRHVAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW ++P + +L N + +L + I K L AI G+++ + Sbjct: 172 GNIYVDEVLWMTGINPEQPANTLTANQ------IAELRENIIKELATAIKYKGTTVHSFT 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ+ YG G+ C CG + +I A R T +C +CQ Sbjct: 226 NAFGDAGAFQDRLKAYGHAGDEC-PRCGTKMVKIKVAERGTTFCPHCQ 272 >gi|146284319|ref|YP_001174472.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] gi|166198735|sp|A4VRM9|FPG_PSEU5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145572524|gb|ABP81630.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri A1501] Length = 270 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LIRAESG-TLIVHLGMSGSLRLVDAASPAA----KHEHVDILLESGQ-----ALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SDEPLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRAR------YLKLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C S CG +R I R++ YC+ CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFCKS-CGSTLREIRLGQRASVYCSRCQR 270 >gi|296132484|ref|YP_003639731.1| formamidopyrimidine-DNA glycosylase [Thermincola sp. JR] gi|296031062|gb|ADG81830.1| formamidopyrimidine-DNA glycosylase [Thermincola potens JR] Length = 275 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++R+L + ++ + + K ++ F G++I+++ RR KY Sbjct: 1 MPELPEVETVKRSLEEKLLGKSIQHVDIFMDKVIKEPSVEEFQQILAGREILNLGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L G +I+ HL M+G I + + +H H+ L+++ + + D Sbjct: 61 LLLYLSGGYAIVFHLRMTGQLIYSERTAVRA----KHTHLVFHLSDDNELR-----FTDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L+ + LRT+G EP F +L + +K + +K LL+Q +AG Sbjct: 112 RQFGRVYLLPDDQLDKITGLRTMGVEPLTEEFTKEFLKKELKRKRTKIKALLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+RAK++P R +L Q + +L + I +VL + I+ G+S++DY Sbjct: 172 IGNIYADEALFRAKINPERLASTLNQRE------ISRLHRAIVEVLTEGIENRGTSIKDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G +Q+ VYGK +PC CG +I R GRS++YC CQK Sbjct: 226 VDGEGKSGNYQDLLKVYGKEEKPC-PVCGSVILRKKIGGRSSYYCGRCQK 274 >gi|77919460|ref|YP_357275.1| formamidopyrimidine-DNA glycosylase [Pelobacter carbinolicus DSM 2380] gi|90101308|sp|Q3A3F2|FPG_PELCD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77545543|gb|ABA89105.1| DNA-(apurinic or apyrimidinic site) lyase [Pelobacter carbinolicus DSM 2380] Length = 271 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + V + + + LR+ P + SA G V RRAKYL Sbjct: 1 MPELPEVETIRRGISPWVIDQKVVAVVVRQPRLRWPVPSNLSACLVGYAFSGVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS I + H+HV I+L + + NDPR Sbjct: 61 LLPNPAGC-LLIHLGMSGSLRIVPSDTP----PAAHDHVDIALESGRTLR-----LNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +E + L LGPEP F L + + +KN +++Q+IV G+ Sbjct: 111 RFGAVLWIE-GRPEDHALLAHLGPEPFAVEFTGAMLYARSRGRKLAVKNFIMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P+R + + L + +++VL AI+AGG++LRD+ Sbjct: 170 GNIYASEALYRAGIHPMRAAGRVSRRR------YAALAEAVRQVLTAAIEAGGTTLRDFT 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYF VYG+ G+PC+ CG+ IR RS+++CT CQ+ Sbjct: 224 DENGRPGYFSQRLLVYGREGQPCVH-CGRPIRCETIGQRSSYFCTRCQR 271 >gi|107023731|ref|YP_622058.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia AU 1054] gi|116690818|ref|YP_836441.1| formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] gi|122978692|sp|Q1BTH0|FPG_BURCA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215614|sp|A0KAM1|FPG_BURCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|105893920|gb|ABF77085.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Burkholderia cenocepacia AU 1054] gi|116648907|gb|ABK09548.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia cenocepacia HI2424] Length = 275 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 148/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC CG +R+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCGTPVRQIVQGQRSTYFCPTCQR 275 >gi|266618586|pdb|3GP1|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-V222p Complex Length = 273 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 146/290 (50%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS+ R Y Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTPRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|332358992|gb|EGJ36813.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK49] Length = 274 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G++I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLILGKTIQSVEVKYPKMIQMDLDAFRQDLLGQEIRSMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLT-DKVLISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLESYFAARKLGPEPTEADFLLEPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADSLKPAE------VKQLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGHPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|117620578|ref|YP_854697.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166215607|sp|A0KEN2|FPG_AERHH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117561985|gb|ABK38933.1| formamidopyrimidine-DNA glycosylase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 270 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I VSRRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEIQE-LVDLTIHRVSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +I+ HLGMSGS + +H+HV I L N + NDPR Sbjct: 60 LLETDFGTAIL-HLGMSGSLRVLDIGTPA----EKHDHVDIELANGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + L LGPEP ++FNA YL + +++ +K L++ ++V G+ Sbjct: 110 RFGA-LLWTREPAEAHALLAKLGPEPLTDAFNADYLRERAKGRSTAIKTFLMDNQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ + L L+ EI++VL +AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAAGNIS------AERLGTLVAEIKRVLAEAIRQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC C ++ I R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQPCFH-CHTLLSEIRLGQRTTVFCSHCQR 270 >gi|91791579|ref|YP_561230.1| formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] gi|123166575|sp|Q12SR9|FPG_SHEDO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91713581|gb|ABE53507.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella denitrificans OS217] Length = 271 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + TV ++ + +LR+ P + G+ I+ V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVDQTVVELIVRNASLRWPVP-DLAHNIVGQTILSVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++ IVHLGMSGS I + +H+H+ + L N + +NDPR Sbjct: 60 LIDTEAGIT-IVHLGMSGSLRI----LPRNTPVEKHDHIDLVLANGRMLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN + L K +K L++ IV G+ Sbjct: 110 RFGAWLWYELPEE-AHPLLAKLGPEPLSEAFNPLQLLTALKGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPESEAGKID------IEKLTLLVVEVKQILAQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ + C CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGSKSCTH-CGNLLSEIRLGQRTTVFCGLCQ 269 >gi|324993806|gb|EGC25725.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK405] gi|324994875|gb|EGC26788.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK678] Length = 274 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y +R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAVRKLGPEPTEADFLLPPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|46143899|ref|ZP_00133897.2| COG0266: Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209444|ref|YP_001054669.1| formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae L20] gi|166215606|sp|A3N3S8|FPG_ACTP2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126098236|gb|ABN75064.1| Formamidopyrimidine-DNA glycosylase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 273 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + I + + LR+ +G KI+ +SRRAKYL Sbjct: 1 MPELPEVETSLRGVEPYLHGKIIKQIVVRTQKLRWAVSDELQH-MQGAKIVALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +I HLGMSGS I + +H+HV + + + YNDPR Sbjct: 60 ILHTTQGDILI-HLGMSGSLGILQENQQ---PAGKHDHVDLITQDGMVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T Q+ + LGPEP SF A YL + K +KN ++N IV G+ Sbjct: 111 KFGC--WLWTKNAEQHELITRLGPEPLSESFTAAYLFARSRNKTVAVKNFIMNNDIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A+L P ++L + +L++ I++VL AI GG++L+D++ Sbjct: 169 GNIYACESLFMAELHPELAAQNLTEKQ------CERLVKVIKEVLAKAIIQGGTTLKDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ E C +CG +I V R++++C +CQ Sbjct: 223 QPDGKPGYFAQVLQVYGRKDEACN-DCGTIIEAKVIGQRNSYFCPHCQ 269 >gi|319745430|gb|EFV97736.1| DNA-formamidopyrimidine glycosylase [Streptococcus agalactiae ATCC 13813] Length = 273 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L ++ N + I + + ++F + GK I V RR KYL Sbjct: 1 MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNNFMISLPGKTIQQVLRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G + ++ HL M G +++ + + +H H+ LTN + ++Y D R Sbjct: 61 LFDF-GEMVMVSHLRMEGKYLLFPNK----VPDNKHFHLYFKLTNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +LV S Y + LGPEP ++F + +K LL+Q++VAG+ Sbjct: 111 KFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALW AK+ P R L ++ + L +EI ++L I+ GGS++R Y Sbjct: 171 GNIYVDEALWAAKIHPQRLANQLTESETS------LLHKEIIRILTLGIEKGGSTIRTYK 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G Q VYGKTG+PC CG +I++I GR T YC CQ Sbjct: 225 NALGEDGTMQKYLQVYGKTGQPC-PRCGCLIKKIKVGGRGTHYCPRCQ 271 >gi|294138884|ref|YP_003554862.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] gi|293325353|dbj|BAJ00084.1| formamidopyrimidine-DNA glycosylase [Shewanella violacea DSS12] Length = 271 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + V + + +LR+ P + G+ I +V RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLVGQQVIGLVVRNASLRWPVPQ-IAQQIVGQVIRNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I S + +H+H+ + L + + +NDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRIVPRST----QVEKHDHIDLELASGKILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP ++F YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLSKLGPEPLKDNFTPKYLFDSLRNKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L + L L+ +++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRLD------IERLTILVTQVKQILASAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ G+ C + CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGDTC-TQCGNLLSEIKLGQRATVFCGICQ 269 >gi|171318636|ref|ZP_02907782.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|172061757|ref|YP_001809409.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] gi|238689132|sp|B1YN48|FPG_BURA4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171096144|gb|EDT41067.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MEX-5] gi|171994274|gb|ACB65193.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria MC40-6] Length = 275 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHAREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|1169728|sp|P42371|FPG_LACLC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|433584|emb|CAA52351.1| formamidopyrimidine-DNA-glycosylase [Lactococcus lactis] Length = 273 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ + ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPR----EKHDHLTMKFADG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG +L+ T Y + +GPEP D F+ + K +K LL Q +VAG Sbjct: 111 KFGTWELISTDQVLPYFLKKKIGPEPTYDEDFDEKLFREKLRKSTKKIKPYLLEQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 LGNIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 -SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 272 >gi|294085129|ref|YP_003551889.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] gi|292664704|gb|ADE39805.1| formamidopyrimidine-DNA glycosylase [Candidatus Puniceispirillum marinum IMCC1322] Length = 277 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 166/289 (57%), Gaps = 12/289 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L V+ V + + RK+LR+ P G + +RR KY+ Sbjct: 1 MPELPEVETVRSALAPVVTGQQVMAVYVGRKDLRWPLPEALDKQLLGCRFAAPTRRGKYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +++HLGMSGS I +H+H+ +++ + +Y ++ NDPR Sbjct: 61 LMPNDNGQVLLIHLGMSGSIRIHEAKPELA----KHDHMMLTVEADDGGHRY-IVLNDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++DL + L+ +GPEP N+F+A ++ F + S +KNALL+Q+++AGI Sbjct: 116 RFGWVDLFAAEDMATHKLLKDMGPEPLGNAFSATHIQTVFANRKSPVKNALLDQRLIAGI 175 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL+++ +SP R+ S+ KL I VL AI GG+SLRD+V Sbjct: 176 GNIYACEALFKSGISPRRRAGSITAGRAD------KLAHAIVTVLRAAIAEGGTSLRDHV 229 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G IGYF SVYG+ G PC+ C IR IVQ+GRS+FYC CQ+ Sbjct: 230 QPGGEIGYFVQKLSVYGRDGLPCV-ICETPIRIIVQSGRSSFYCPSCQR 277 >gi|313884925|ref|ZP_07818677.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] gi|312619616|gb|EFR31053.1| DNA-formamidopyrimidine glycosylase [Eremococcus coleocola ACS-139-V-Col8] Length = 282 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 15/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF--SAATRGKKIIDVSRRAK 58 MPELPEVE RR L + +T+ + ++ + S +G+ I + RRAK Sbjct: 1 MPELPEVETNRRGLAQCVTGLTIDQVDIYWPRIVKTEMDLLKWSQELQGRTIERMDRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ L L+++ HL M G + +K +H H+ ++ T+ + + Y D Sbjct: 61 YLIFVLSQGLALVSHLRMEGKYFYYPVDQIPEVKG-KHVHLIMTFTDGSQLQ-----YQD 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG +L+ + Y + +GPEP SF K + +K ALL+QK+VA Sbjct: 115 VRKFGRFELMPQTELADYFKAKKIGPEPTPESFKLDGFYASLGKISRAIKPALLDQKLVA 174 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL++A++ P+ + L + + +L I VL A++AGG+++R Sbjct: 175 GLGNIYVDEALFQAQIHPLTPAKDLSYDQAS------RLHAAIIDVLARAVEAGGTTIRT 228 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G G FQ +VYG+T +PC CG I ++V R T YC CQ Sbjct: 229 YLNSLGEAGSFQVQLAVYGQTDQPC-PRCGHPIEKMVVGQRGTHYCPICQ 277 >gi|315648810|ref|ZP_07901905.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315275778|gb|EFU39130.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 278 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 149/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++K + + +H + R D F+ + + V RR K Sbjct: 1 MPELPEVETVKRTLNQLIKGKHIDQVSVHLPRIIQRPDDAEAFAFMLKDHTVQGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ L ++ HL M G + + +H HV ++ T + Y D Sbjct: 61 FLRILLD-GLVLVSHLRMEGRYGLYRAEEP----VEKHTHVIFHFSDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++++ PL LG EP D++F K + +K LLNQ V Sbjct: 111 VRQFGTMHLFAPGEEFKHAPLAKLGYEPLDDTFTLGTFKQVIGSKKTKIKAVLLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV EAL+RAK+ P R SL L +L I L +A++AGGSS++ Sbjct: 171 GIGNIYVDEALFRAKIHPERSANSLKDAE------LKRLYHAIVDTLSEAVNAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ +PC + CG + ++V GR T YC CQ Sbjct: 225 YVNGQGEMGMFQHSHQIYGRKDKPCHA-CGGPVHKMVVGGRGTHYCPKCQ 273 >gi|327460965|gb|EGF07298.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1057] Length = 274 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDRFVHDLPGQTIEMIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDE----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEADFLFPPFAAALSCSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R +L + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPADNLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|116511212|ref|YP_808428.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. cremoris SK11] gi|116106866|gb|ABJ72006.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Lactococcus lactis subsp. cremoris SK11] Length = 272 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I + RR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGILRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ + +I HL M G + + + +H+H+T+ ++ ++IY D R Sbjct: 61 IFEIGDDFRLISHLRMEGKYRLATLDAPR----EKHDHLTMKFSDG------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVIPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P ++ L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKEANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 SALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 271 >gi|114565074|ref|YP_752588.1| formamidopyrimidine-DNA glycosylase [Shewanella frigidimarina NCIMB 400] gi|114336367|gb|ABI73749.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella frigidimarina NCIMB 400] Length = 271 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV+++ + +LR+ P + G++I +V RRAKYL Sbjct: 1 MPELPEVEVTRLGISPYLIEQTVSELIVRNASLRWPVPA-IAQNIVGQRITNVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++ IVHLGMSGS I + +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGMT-IVHLGMSGSLRI----LPRNTPIEKHDHIDLVLENGRMLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP F + L K +K L++ IV G Sbjct: 110 RFGAWLWYELPEE-AHPLLSKLGPEPLSPHFTPLQLQAALAGKKKAIKLCLMDNHIVVGA 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ + L L+ E++++L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAAAGSID------LERLTILVSEVKQILAHAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ+ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTA-CGNLLSEIKLGQRTTVFCGLCQQ 270 >gi|93279449|pdb|2F5Q|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc2 gi|93279452|pdb|2F5S|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c Containing Dna Cc1 Length = 274 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MP+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K Sbjct: 1 MPQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 FLKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VA Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274 >gi|253577307|ref|ZP_04854625.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843311|gb|EES71341.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. oral taxon 786 str. D14] Length = 285 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ T+ + + + R D F A G I+++ RR K Sbjct: 1 MPELPEVETVRRTLTQLIVGKTIQSVHVFLPRIIQRPDDIRRFEAELAGHTILEIGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I ++ L ++ HL M G + + + +H HV T+ T + Y D Sbjct: 61 FLRIIMD-GLVLVSHLRMEGRYGLYQPGE----EVEKHTHVIFRFTDGTELR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ PL LG EP + SF + ++ + +K ALLNQ+ + Sbjct: 111 VRQFGTMHLFAPGEEFTNKPLVKLGLEPLEESFTLQAFQDKISRRTTKIKPALLNQEYIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P L + L +L I + L +A++AGGSS++ Sbjct: 171 GLGNIYVDEALFRAGIHPEYPADKLTKRQ------LEQLHAAIVETLTEAVEAGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ++ +YG+ GEPCL NCGQ + + V GR T +C CQ Sbjct: 225 YVNGQGEMGMFQHSLRMYGRQGEPCL-NCGQPVMKTVVGGRGTHFCPNCQ 273 >gi|227520125|ref|ZP_03950174.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] gi|227072415|gb|EEI10378.1| formamidopyrimidine-DNA glycosylase [Enterococcus faecalis TX0104] Length = 280 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 145/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L ++ T+ ++ + + F G+ + RR K+ Sbjct: 1 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTSEGIERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L N +I HL M G + +H HV + T+ T + Y D Sbjct: 61 LIFKLSDND-MISHLRMEGKYEFHQADDEIA----KHTHVMFTFTDGTQLR-----YLDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + +QY + LGPEP + F K + +K LL+QK+V G Sbjct: 111 RKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+A++ P + SL + L Q I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWQAQIHPEQPADSLKPVE------VATLYQAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G FQ A +VYG+TG PC CG I + A R T YC CQ+ Sbjct: 225 LNALGEAGTFQVALNVYGQTGLPCN-RCGTPIVKTKVAQRGTHYCPQCQQ 273 >gi|297583658|ref|YP_003699438.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] gi|297142115|gb|ADH98872.1| formamidopyrimidine-DNA glycosylase [Bacillus selenitireducens MLS10] Length = 286 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 149/291 (51%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ T+ D+ + + D F+ G+ I + R+ K Sbjct: 1 MPELPEVETVRQTLTELLIGRTIEDVWVGWPAMIKEPDDVERFALMLTGQTIQSIGRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + L+ + ++ HL M G + ++ + +H HV I T+ T + Y D Sbjct: 61 FLKLYLD-DCVLVSHLRMEGKYALKEAGSER----SKHTHVVIRFTDGT-----ALHYAD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNS-FNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M + Q PPL +GPEP A L + K +K ALL+Q +V Sbjct: 111 VRKFGTMHAFVKGTEEQRPPLSKVGPEPVGKDRITADELGTRLKKTTRAVKAALLDQSLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIYV EAL+RA + P +L P ++ L+ I L +AID GG+S+R Sbjct: 171 AGLGNIYVDEALFRAGIHPAVPAHTL------PDKLIPVLLSAISDTLQEAIDQGGTSIR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +GYFQ VYG+TGEPC CG I R V GR T C CQ Sbjct: 225 SYVNGKGEMGYFQQQLFVYGRTGEPC-RKCGTPISRSVVGGRGTHTCEVCQ 274 >gi|266618589|pdb|3GPP|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-T224p Complex gi|266618607|pdb|3GQ5|A Chain A, Sequence-Matched Mutm Interrogation Complex 5 (Ic5) Length = 273 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Y Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRPY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|331005604|ref|ZP_08328974.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] gi|330420577|gb|EGG94873.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC1989] Length = 272 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ + +K V+ + L LR+ KK++++ RR KYL Sbjct: 1 MPELPEVETTRQGITPHIKGKQVSAVILRHHQLRWPIDSQLVDYLTRKKLLNIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E +++HLGMSGS I +T P +H+HV I + N + Y+DPR Sbjct: 61 LLEFVHG-HLLIHLGMSGSLRIINTKTDAPQ---KHDHVDIIFSGNIGLR-----YHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T + + +R LGPEP F YL K+ ++K +++ IV G+ Sbjct: 112 RFGSI-LWTTEDPFNHKLIRKLGPEPLLEDFTGEYLFKASRKRKKDVKTFIMDSHIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + + P + L + ++ I+ VL +I GG++LRD+V Sbjct: 171 GNIYANESLFTSGIRPTKAAEKLTRKQ------CDLWVENIKAVLQRSITQGGTTLRDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GE C++ C +++ I QA R+T YC+ CQK Sbjct: 225 GGDGKPGYFAQQLNVYGRGGEACVT-CRHILKEIRQAQRTTVYCSRCQK 272 >gi|225728858|ref|YP_002735122.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] gi|222113497|emb|CAR41256.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis 0140J] Length = 273 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTVKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ + T ++Y D R Sbjct: 61 IFHFT-DLVMVSHLRMEGKYLLFEGGIPENKH---------FHFFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L + + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASELKKAE------VKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|323351177|ref|ZP_08086833.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] gi|322122401|gb|EFX94112.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis VMC66] Length = 274 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFHLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|322385832|ref|ZP_08059475.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] gi|321270117|gb|EFX53034.1| DNA-formamidopyrimidine glycosylase [Streptococcus cristatus ATCC 51100] Length = 274 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRIRYAKMIGTGVDAFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L ++ HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLT-GEVLVSHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D+ F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEPYFAARKLGPEPTDSEFLLAPFAAALSRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRAQIHPARPAASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGIPIEKIKLGGRGTHLCPHCQK 272 >gi|70733155|ref|YP_262928.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] gi|90101311|sp|Q4K4A5|FPG_PSEF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68347454|gb|AAY95060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf-5] Length = 270 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQKVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVGLPAA----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSHDPL--NHELLVRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRAR------YLKLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ YC CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGENC-KVCGTGLREIKLGQRASVYCPRCQ 269 >gi|324991455|gb|EGC23388.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK353] Length = 274 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRCGLERLVVGKTIGQVQVRYAKMIGTGVDSFVHDLPGQTIEKIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFHLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFQMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L++ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLKKDQLEAYFAARKLGPEPTEADFLLPPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|53718165|ref|YP_107151.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76810131|ref|YP_332171.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126441301|ref|YP_001057626.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 668] gi|126453315|ref|YP_001064872.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134279564|ref|ZP_01766276.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|167718022|ref|ZP_02401258.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei DM98] gi|167737037|ref|ZP_02409811.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 14] gi|167814146|ref|ZP_02445826.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 91] gi|167822670|ref|ZP_02454141.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 9] gi|167844242|ref|ZP_02469750.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei B7210] gi|167892753|ref|ZP_02480155.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 7894] gi|167901249|ref|ZP_02488454.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei NCTC 13177] gi|167909466|ref|ZP_02496557.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 112] gi|167917495|ref|ZP_02504586.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei BCC215] gi|217419604|ref|ZP_03451110.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242318008|ref|ZP_04817024.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254181862|ref|ZP_04888459.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|254187795|ref|ZP_04894307.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|254196842|ref|ZP_04903266.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|254258992|ref|ZP_04950046.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] gi|81690471|sp|Q63XL4|FPG_BURPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90101297|sp|Q3JW82|FPG_BURP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215617|sp|A3NRA1|FPG_BURP0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215618|sp|A3N5K5|FPG_BURP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52208579|emb|CAH34515.1| putative formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei K96243] gi|76579584|gb|ABA49059.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1710b] gi|126220794|gb|ABN84300.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 668] gi|126226957|gb|ABN90497.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1106a] gi|134248764|gb|EBA48846.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 305] gi|157935475|gb|EDO91145.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei Pasteur 52237] gi|169653585|gb|EDS86278.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei S13] gi|184212400|gb|EDU09443.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 1655] gi|217396908|gb|EEC36924.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 576] gi|242141247|gb|EES27649.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1106b] gi|254217681|gb|EET07065.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei 1710a] Length = 276 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|78067597|ref|YP_370366.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] gi|90101298|sp|Q39CU4|FPG_BURS3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77968342|gb|ABB09722.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Burkholderia sp. 383] Length = 275 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTEMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPADGLP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G+PC C IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGQPC-RVCNTPIRQIVQGQRSTYFCPTCQR 275 >gi|288942769|ref|YP_003445009.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] gi|288898141|gb|ADC63977.1| formamidopyrimidine-DNA glycosylase [Allochromatium vinosum DSM 180] Length = 277 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR P G+ I + RR+KYL Sbjct: 1 MPELPEVETTLRGIRPHLEGRRIARLIVRNPRLRQPIPPEMPERVAGQPIRSLRRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI LE S++VHLGMSGS + + P+ H+H+ + L++ + ++DPR Sbjct: 61 LIGLEHG-SLLVHLGMSGSLRVV--TAESPLPPRTHDHLDLVLSDGGILR-----FHDPR 112 Query: 121 RFGFMDLVETSLK---YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RFG + S + ++P L LGPEP +N F+ +L + +K+ +++ +V Sbjct: 113 RFGIFLWIPMSPEIALVEHPLLCRLGPEPLENDFDGEHLYRSSRSRRVAVKSFIMDSAVV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A L P R + Q +L + I++VL +I+ GG++LR Sbjct: 173 VGVGNIYASESLFLAGLHPARACNRIDQGG------YGRLAETIRRVLRASIEQGGTTLR 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V+ G+ GYF + VYG+ GEPC CG I RS+FYC CQ Sbjct: 227 DFVNETGAPGYFAQSLRVYGRAGEPC-RICGTRIEPQRIGQRSSFYCPRCQ 276 >gi|325694808|gb|EGD36713.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK150] Length = 274 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPGQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G ++ HL M G ++ + +H HV T+ ++Y D R Sbjct: 61 LFYLTGG-VLVSHLRMEGKYLFYPDE----VPERKHAHVFFETTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLEAYFAARKLGPEPTEVDFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIYPARPADSLKPTE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC CG I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCGSPIEKIKLGGRGTHLCPHCQK 272 >gi|298290594|ref|YP_003692533.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] gi|296927105|gb|ADH87914.1| formamidopyrimidine-DNA glycosylase [Starkeya novella DSM 506] Length = 299 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 128/304 (42%), Positives = 174/304 (57%), Gaps = 20/304 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L VM+ + R +LR+ P F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLAPVMEGRRILAAVARRPDLRWPLPERFAERLTGRRIGRLGRRAKYL 60 Query: 61 LIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNP---------QHNHVTISLTNN 106 + ++E +++HLGMSGSF IE + H+HV + Sbjct: 61 VADIEPQDGAAPEVLVMHLGMSGSFRIEPDEGVPSVPGDFVMARSKTSAHDHVAFRMEGG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 V+YNDPRRFG M LV + +P R +GPEP FNA L + + Sbjct: 121 -----VEVVYNDPRRFGAMLLVPRAELDAHPLFRDIGPEPLGPGFNAESLAQALAGRRTP 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+QK+VAG+GNIYVCEAL RA LSP R+ SL+ G P +L+ +++VL Sbjct: 176 IKAALLDQKVVAGLGNIYVCEALHRAGLSPERQAASLVTATGKPTAATRRLVGIVREVLE 235 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCT 285 +AI AGGS+LRD+ +DG++GYFQ+ F Y + GE CL C I R+VQ+GRSTFYC Sbjct: 236 EAIAAGGSTLRDHAQVDGTLGYFQHTFRAYDREGEACLTPGCRGTIARLVQSGRSTFYCA 295 Query: 286 YCQK 289 CQ+ Sbjct: 296 TCQR 299 >gi|192360935|ref|YP_001983958.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] gi|229541072|sp|B3PG51|FPG_CELJU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190687100|gb|ACE84778.1| formamidopyrimidine-DNA glycosylase [Cellvibrio japonicus Ueda107] Length = 270 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VTD+ + + LR+ P S G+++ SRR KYL Sbjct: 1 MPELPEVETTLRGVSPHILGRKVTDLVIRQPRLRWPIPLELSEQLPGQQLKAASRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I HLGMSGS I H+H + N + Y DPR Sbjct: 61 LLSFNTGTALI-HLGMSGSLRIVKPEEPPLF----HDHFDMHFGNR------ILRYCDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E +Q+ LR LGPEP + F YL + K+ +K +++ KIV G+ Sbjct: 110 RFG-CLLWEAGDIHQHALLRDLGPEPLGDDFTPAYLYERSRKRTQAIKQFIMDSKIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + PIRK +L ++ + L+++I+ VL +I GG++LRD+V Sbjct: 169 GNIYANESLFMAGIKPIRKAGALSRH------MCEDLVRDIRFVLQRSITQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C + C + ++ I R+T YC CQ+ Sbjct: 223 GGDGKPGYFQQQLLVYGRGGEACKT-CQKPLKEIRMNDRTTVYCVTCQQ 270 >gi|170700383|ref|ZP_02891393.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] gi|170134727|gb|EDT03045.1| formamidopyrimidine-DNA glycosylase [Burkholderia ambifaria IOP40-10] Length = 275 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDIRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|134299455|ref|YP_001112951.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] gi|172044279|sp|A4J4X3|FPG_DESRM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134052155|gb|ABO50126.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Desulfotomaculum reducens MI-1] Length = 277 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 153/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIID-VSRRAK 58 MPELPEVE I R+L + + +T + L + +R F+ G++ + RR K Sbjct: 1 MPELPEVETIVRSLEKHLSGLVITSVDLFKPEVIRTPRVDIFTDQIVGRQFQKKLGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL+ + L++++HL M+G I + +H HV L N + + D Sbjct: 61 YLLLHMSDGLTLVIHLRMTGRLIYCDAD----LPLEKHTHVIFHLDNGKQLR-----FAD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG M LV T P ++ +GPEP D +F+ YL + ++ + +K+ LL+Q VA Sbjct: 112 VRRFGRMSLVPTREVPHLPGIKEMGPEPLDTAFSREYLKKELRRRRTRIKSLLLDQCFVA 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL AK+ P R L + L + I +V+ I G++ RD Sbjct: 172 GLGNIYADEALHEAKIHPERLAPDLTSREASG------LHKAIIEVISSGIKHRGTTFRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G G +Q+ VY + G PC +CG+ I+RI AGRS++YC+ CQK Sbjct: 226 YVDGEGRSGSYQHQLKVYNREGLPC-PHCGKPIQRIKVAGRSSYYCSSCQK 275 >gi|146386274|gb|ABQ23941.1| formamidopyrimidine-DNA glycosylase [Streptococcus uberis] Length = 273 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + P F+ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLENLIIGKEIASVTIKVPKMIVSNPDTFAGDLMGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++ HL M G +++ + T ++Y D R Sbjct: 61 IFHFT-DLVMVSHLRMEGKYLLFEGGIPENKHF---------HFFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N+F +K LL QK+V G+ Sbjct: 111 KFGTLELLAQDGLDLYFSQRKLGPEPTKNAFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P+R L + + ++ + +L A+D GGS++R Y Sbjct: 171 GNIYVDEVLWAAQVHPLRLASELKKAE------VKRIHDQTIAILAFAVDKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQKGSPC-PRCGTEIEKIKVGGRGTHFCPKCQK 272 >gi|325685807|gb|EGD27880.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 273 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 155/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V+R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVNRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F+ Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFSLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E +W+++++P+ L KD + L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVIWQSRINPLTPANELT------KDQVKCLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|83309731|ref|YP_419995.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] gi|82944572|dbj|BAE49436.1| Formamidopyrimidine-DNA glycosylase [Magnetospirillum magneticum AMB-1] Length = 308 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 121/294 (41%), Positives = 162/294 (55%), Gaps = 20/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R LR FP F+ G+ + V RRAKYL Sbjct: 30 MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 89 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G L ++ HLGMSG I + H+HV + V DPR Sbjct: 90 VVRLDGGLVMLGHLGMSGRMTI---GALRNEPPGPHDHV-----EWVTDQGISVTLTDPR 141 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L E S +P L +GPEP D +F+A L K +K LL+QK+VAG+ Sbjct: 142 RFGLFALCEASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGL 201 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCE+L+RA++SP+R SL + + +L+ I+ VL +A+ AGGS+LRD+ Sbjct: 202 GNIYVCESLFRAEISPLRPAGSLSRAE------VGRLVPLIKAVLSEAVAAGGSTLRDHA 255 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCL-----SNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYFQ++F VYG+ GE C CG I R+ QAGRSTFYC Q+ Sbjct: 256 RPDGELGYFQHSFQVYGREGETCPGCPGAPACGG-ILRMTQAGRSTFYCAKRQR 308 >gi|114778708|ref|ZP_01453520.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] gi|114551070|gb|EAU53632.1| Formamidopyrimidine-DNA glycolase [Mariprofundus ferrooxydans PV-1] Length = 271 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 111/288 (38%), Positives = 162/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++R L + + + HR +LR+ P + G +I+ V RR+KYL Sbjct: 1 MPELPEVEVVRTGLEPCLIGRRILTVTCHRPSLRYPLPD--MGSLSGSRIVAVRRRSKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE+ ++ HLGM+G F + + + +H HV I L + T+ + Y D R Sbjct: 59 LIEVSDGRVLVWHLGMTGQFHVLGSEVSA----GKHEHVRIDLDDGTSLR-----YRDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG+ L+ ++P TLGPEP ++FN YL + + +K +++ +V G+ Sbjct: 110 RFGYAGLLAADQLAEHPWFATLGPEPLGDAFNGAYLAELCRGRKAPIKTVIMDAHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R + L L I+ VL +AI AGGS++ D+V Sbjct: 170 GNIYAAESLFRAGIHPGRAAGRIAGAR------LDLLASSIRDVLREAISAGGSTISDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +AF VYG+ G+PCL CG+ IRRI Q+GRS+FYC CQ Sbjct: 224 RADGRPGYFAHAFQVYGRKGQPCL-VCGEGIRRIQQSGRSSFYCIRCQ 270 >gi|205374552|ref|ZP_03227348.1| formamidopyrimidine-DNA glycosylase [Bacillus coahuilensis m4-4] Length = 274 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L ++ + + + + + + F+ A + I+DV RR K Sbjct: 1 MPELPEVETVRRTLKELIVGKKIIGVTVGWPKMIKKPEQVEQFTDALVDETIMDVHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+IE S++ HL M G + + + + H HV ++T+ + Y D Sbjct: 61 FLIIETSH-YSLVSHLRMEGKYGVF----EEKEELLPHTHVIFHFDDDTSLR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y PL LGPEP F+ YL + K +K LL+Q IV Sbjct: 111 VRKFGTMHLYTKGQEYLDKPLSELGPEPFSKEFHFNYLFEKLQKTERAIKAVLLDQTIVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L++A + P RK++++ +L +EI L A++AGGS++R Sbjct: 171 GLGNIYVDEVLFKAGIDPERKSKTITLQET------EQLTREIVSTLTIAVEAGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y++ G +G +QN VYG+ E C CG I + V AGR T YC CQ Sbjct: 225 YINSQGKVGTYQNQLFVYGRKDEAC-RVCGSPIYKKVTAGRGTHYCANCQ 273 >gi|163847434|ref|YP_001635478.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] gi|189044586|sp|A9WDC2|FPG_CHLAA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163668723|gb|ABY35089.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aurantiacus J-10-fl] Length = 278 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L ++ T+T + L + P F+A G++I + RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTPSPDEFAALIAGRRIEAIGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G ++ +HL MSG ++ ++ +H H + L N R+I+ND Sbjct: 61 LLLSLDGEWTLAIHLRMSGQLLVAEPETSEA----RHVHFALDLDNGR-----RLIFNDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++ + GPEP F L + + + +K LL+Q ++AG Sbjct: 112 RKFGRVHLLDRQGLAALDAVH--GPEPLAADFTPSALAERLQNRRAPIKALLLDQHLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A++ P+ L + +L I+ VL +AI GSSLR+Y Sbjct: 170 IGNIYANEALWLARIHPLTPGAMLTPEQ------INELHHAIRHVLQEAITNQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G Q F+VY + GEPC C I RIV A RST++C CQ Sbjct: 224 RDGYGRQGTQQEHFNVYDRAGEPC-PRCQSTIERIVVAQRSTYFCPTCQ 271 >gi|104774357|ref|YP_619337.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|122983913|sp|Q1G9A3|FPG_LACDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|103423438|emb|CAI98311.1| DNA-formamidopyrimidine glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 273 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 272 >gi|307728386|ref|YP_003905610.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] gi|307582921|gb|ADN56319.1| formamidopyrimidine-DNA glycosylase [Burkholderia sp. CCGE1003] Length = 276 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + RG + +V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPYVAGRKVERVEVRTPALRWPIPADLAKTLRGHVVRNVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + IVHLGM+G+ + P +H+HV + + + + DPR Sbjct: 61 LFETDSGWF-IVHLGMTGTLRVLRHVPHAPAAA-KHDHVDWIFDD------FILRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E +P L +LG EP +F+ + + ++K ALL +IV Sbjct: 113 RFGAVLWHPREAGDVLGHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLVR------YGLLADAVRVTLAAAIEKGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ + VY + G+PC C IR+IVQ RST++C+ CQ+ Sbjct: 227 FVGSNGESGYFQLDYFVYDRAGQPC-RVCATPIRQIVQGQRSTYFCSTCQR 276 >gi|227530467|ref|ZP_03960516.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] gi|227349572|gb|EEJ39863.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Lactobacillus vaginalis ATCC 49540] Length = 280 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ + + I +H + F + G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLLKIAAGRKINGIDVHYGKTITNDVEQFRQSLIGQTIETVDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M GS+ + +H HV T+ T + Y D R Sbjct: 61 LFRFSNHLTMVSHLRMEGSYYTQPVDAPID----KHTHVVFKFTDGTE-----LCYRDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+T + L+T+GPEP F Y + +K LLNQ+ +AG+ Sbjct: 112 KFGRMTLVKTGDEMTVGGLKTIGPEPTAADFKIDYFKRILQRSRGKIKPFLLNQRHIAGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW +K++P + +L + L I + L AI+ G+++ + Sbjct: 172 GNIYVDEVLWMSKINPEQPANTLTDKQ------IQTLHDNIIQELSRAIEYKGTTVHTFK 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ + YG G+ C CG + +I R T +C +CQ Sbjct: 226 NAFGDAGAFQEQLNAYGHGGDLC-PRCGTKMVKIKVNQRGTTFCPHCQ 272 >gi|134096049|ref|YP_001101124.1| formamidopyrimidine-DNA glycosylase [Herminiimonas arsenicoxydans] gi|166215628|sp|A4G916|FPG_HERAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133739952|emb|CAL63003.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) [Herminiimonas arsenicoxydans] Length = 273 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 154/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V+ + L LR+ FP S G+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPYLEGQVVSGVVLRHTGLRWPFPAALSQTLAGRTIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++IVHLGMSG I + +H+H +++ N + DPR Sbjct: 61 LIHFDHG-TLIVHLGMSGHIRILPLG----VPPQKHDHFDMTVGNQV------LRLTDPR 109 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E Q+ LRTLG EP + F A +L Q + S +K LL IV Sbjct: 110 RFGAVLWHAAEEGAVDQHLLLRTLGVEPLEGLFTAQWLYRQTRSRRSAIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A ++P + + +L Q I+++L AI GGS+L+D Sbjct: 170 GVGNIYASESLFQAGINPKTQAHRIG------LQRYERLAQAIREILAAAIAQGGSTLKD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + VY +TGEPC C +R+IVQ RSTFYC CQK Sbjct: 224 FIGVNGQSGYFQQNYFVYARTGEPC-RICNAPVRQIVQGQRSTFYCPNCQK 273 >gi|327482703|gb|AEA86013.1| formamidopyrimidine-DNA glycosylase [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIEPYLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++IVHLGMSGS + + +H HV I L + + Y DPR Sbjct: 61 LIRAESG-TLIVHLGMSGSLRLVDAASPAA----KHEHVDILLESGQ-----ALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + L +LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SDEPLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + KL +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYASEALFAAGIDPRRPAGSISRAR------YLKLGEEIRRILAMAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C NCG +R I R++ YC CQ+ Sbjct: 223 GGDGKPGYFQQELFVYGRGGEFC-RNCGGTLREIRLGQRASVYCGRCQR 270 >gi|146294967|ref|YP_001185391.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|145566657|gb|ABP77592.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens CN-32] gi|319424485|gb|ADV52559.1| formamidopyrimidine-DNA glycosylase [Shewanella putrefaciens 200] Length = 271 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV+D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLIEQTVSDLVIRNGSLRWPVP-DIAKHIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRI----LPHNTPVEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVNQLATALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKIDN------ERLSLLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C +NCG ++ I R+T +C+ CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TNCGNLLSEIRLGQRTTVFCSICQ 269 >gi|320539888|ref|ZP_08039547.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] gi|320030074|gb|EFW12094.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Serratia symbiotica str. Tucson] Length = 271 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + ++ + LR+ + + V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPYLVGHSIQYAIVRNARLRWPVSEQILT-LSAQPVHSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE IIVHLGMSGS + +H+H+ + ++N + Y DPR Sbjct: 60 LIELEHG-WIIVHLGMSGSLRMLRKENQD--AAGKHDHIDLVISNGMILR-----YTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E L LGPEP +FN YL + K LK L++ K+V G+ Sbjct: 112 RFGAWLWCED--LAASNVLVHLGPEPLSEAFNGTYLYKKSRNKRMRLKPWLMDNKLVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R+ SL + L I++VL +I+ GG++LRD++ Sbjct: 170 GNIYASESLFSAGILPDRQADSLNKTEAD------LLAATIKEVLQRSIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ GEPC CG I RSTF+C +CQ+ Sbjct: 224 QSDGKPGYFAQELQVYGRAGEPC-RACGLPIESTKHGQRSTFFCCHCQR 271 >gi|57117507|gb|AAW33970.1| MutM [symbiont bacterium of Paederus fuscipes] Length = 270 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ V + + + LR+ + G++I+ V RRAKYL Sbjct: 1 MPELPEVETIRRGIAPYLEGQRVNRVIIRERRLRWPISDNLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E ++I HLGMSGS + + +H+HV I L + + Y DPR Sbjct: 61 LLRAEVG-TLINHLGMSGSLRLIESGLPAK----RHDHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + ++ LR LGPEP ++F L ++ +K +++ +V G+ Sbjct: 111 RFGA--LLWSQAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSVAVKPFIMDNTVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R ++ K +L EI+++L +AI+ GG++L D++ Sbjct: 169 GNIYASEVLFTAGIDPRRSAGNIS------KTRYSRLAGEIKRILANAIECGGTTLCDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C + CG +R I R++ YC +CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEFCKA-CGGTLREIRLGQRTSVYCPHCQR 270 >gi|222084647|ref|YP_002543176.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] gi|221722095|gb|ACM25251.1| formamidopyrimidine-DNA glycosylase [Agrobacterium radiobacter K84] Length = 279 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 137/280 (48%), Positives = 183/280 (65%), Gaps = 11/280 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + L R +LRF FP FS G+ I +SRRAKYLLI+L+ ++II HLGMS Sbjct: 1 MEGAVLAALELRRNDLRFPFPAEFSRLASGRGITSLSRRAKYLLIDLDDGMTIIAHLGMS 60 Query: 78 GSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF +E + A+ K+ +H+HV LT RVIYNDPRRFGFMD+ Sbjct: 61 GSFRVETGAVAETPGEFHHPRSKDEKHDHVIFHLTGANGPA--RVIYNDPRRFGFMDIAR 118 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P R LGPEP N+ +A YL +F K LK+ALL+QK +AG+GNIYVCEAL Sbjct: 119 RADLGSHPSFRDLGPEPTGNTLSADYLAERFSGKAQPLKSALLDQKNIAGLGNIYVCEAL 178 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WR+ LSP+R SL+ G P + L +L++ I++V+ DAI AGGSSLRD++ DGS+GYF Sbjct: 179 WRSHLSPVRAAGSLVTQAGRPSEELLRLVEAIREVIADAIAAGGSSLRDHIQTDGSLGYF 238 Query: 250 QNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q++FSVY + +PC CG + RIVQ+GRS+FYC CQ Sbjct: 239 QHSFSVYDREAQPCGTPGCGGTVARIVQSGRSSFYCASCQ 278 >gi|113460292|ref|YP_718352.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 129PT] gi|123131889|sp|Q0I0X6|FPG_HAES1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|112822335|gb|ABI24424.1| DNA-(apurinic or apyrimidinic site) lyase [Haemophilus somnus 129PT] Length = 270 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H I + N + YND R Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRIVPHDNPVN----KHDHFDIVMNNGK-----LLRYNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D++ Sbjct: 168 GNIYANEILFLCGLHPQKIAKTLTKKQA------EQLVFTIKQVLNEAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|237810776|ref|YP_002895227.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] gi|237505017|gb|ACQ97335.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei MSHR346] Length = 276 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPVGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 276 >gi|127514618|ref|YP_001095815.1| formamidopyrimidine-DNA glycosylase [Shewanella loihica PV-4] gi|166198750|sp|A3QJA8|FPG_SHELP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126639913|gb|ABO25556.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella loihica PV-4] Length = 271 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + +LR+ P + G+ I + RRAKYL Sbjct: 1 MPELPEVEVTRQGISPHLLDQQVTGLTVRNASLRWPVP-EVAQQIVGQTIRGIRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + + IVHLGMSGS I K +H+H+ + L + + +NDPR Sbjct: 60 LLDTDAGTT-IVHLGMSGSLRI----LPKSTPVEKHDHIDLELASGKVLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP + FN YL K +K L++ IV G+ Sbjct: 110 RFGAWLWCELP-EAAHPLLAKLGPEPLQSGFNVDYLAKALEGKKKAVKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + T L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQTEAGRIDRERLTV------LVAEVKQILAQAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIKLGQRATVFCGLCQ 269 >gi|326405934|gb|ADZ63005.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis CV56] Length = 272 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR+L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRDLEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|315640781|ref|ZP_07895883.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] gi|315483536|gb|EFU74030.1| DNA-formamidopyrimidine glycosylase [Enterococcus italicus DSM 15952] Length = 276 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 138/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA-ATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ T+ + ++ + A G+ + + RR K+ Sbjct: 1 MPELPEVETVRRGLEQLVIGKTIQSVSVYWDRMIEGGDKEKVAFELVGQTVEAIQRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ N +I HL M G + + +H HV T+ + + Y D Sbjct: 61 LIFRYTAND-LISHLRMEGKYEFF----PQETPPSKHTHVIFHFTDGSE-----LHYQDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG LV +Y + LGPEP ++ F K +K LL QK+V G Sbjct: 111 RKFGRFALVAKGKSAEYAGIAKLGPEPTNDQFLLGAFQQGLAKSKKAVKPLLLEQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW+AK+ P R +L + L Q I VL A+ AGG+++R Y Sbjct: 171 LGNIYVDEALWQAKIHPERLACTLTTDESI------ALHQAIIDVLGKAVIAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ A YG+ G+PC S CG +I + A R T +C CQK Sbjct: 225 HNALGEAGTFQVALHAYGQQGKPC-SRCGTLIVKTKVAQRGTHFCPNCQK 273 >gi|146309211|ref|YP_001189676.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina ymp] gi|166198733|sp|A4Y028|FPG_PSEMY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145577412|gb|ABP86944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas mendocina ymp] Length = 270 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E S+I HLGMSGS + +H HV I L + + Y DPR Sbjct: 61 LIKAEAG-SLIGHLGMSGSLRLVECGLVAA----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ ++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGA--LLWCEDPLRHELLARLGPEPLGGLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRAR------YLRLAEEIKRILAHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRAGEFC-KVCGTTLREVKLGQRASVYCPRCQR 270 >gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc argentinum KCTC 3773] Length = 280 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 133/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L + F R + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQITQVKLPYPKVITGDSQAFITGVRNAYFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E PI H H I + YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVE------PIDATPHKHTEIIFELAD---DRVLFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T+ + P L LGPEP + +F + +K+ LL+Q +AG Sbjct: 112 RFGRMVLATTNQETLAVPALGKLGPEPTAQDLTLADMVAKFARSKKPVKSFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L Q I + AI+ G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANLLSEMQ------LATLRQNIISEMARAIEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ +PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVDQPCL-RCGTPLVKIKVGQRGTTFCPVCQ 273 >gi|332638559|ref|ZP_08417422.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Weissella cibaria KACC 11862] Length = 277 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + + P F A G++I + RR KY Sbjct: 1 MPELPEVETVRRGLTRLVVGRTVQGTAVWWEKTVDGLSPEEFDAELAGRRIEAIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M G++ + +H+ VT L + ++Y D Sbjct: 61 LLFRFSGGMTMVSHLRMEGAYYTVPAGT----EPGKHDLVTFHLDDG-----IDLLYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV + Q L +GPEP +++ + Y+ +F K ++K LL+Q +AG Sbjct: 112 RKFGRMKLVPDAEALQVAGLAKIGPEPTESTLSLAYMVAEFGKSRMHVKPFLLDQSHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P+ L + D L L I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHPLTPANKLSE------DELAVLRDNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN VYG+ GEPCL CG + ++ A R T +C CQ Sbjct: 226 TTAFGEAGEFQNELQVYGRVGEPCL-RCGHPLEKMKVAQRGTTFCPVCQ 273 >gi|332186406|ref|ZP_08388151.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] gi|332013774|gb|EGI55834.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. S17] Length = 271 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 122/289 (42%), Positives = 164/289 (56%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L V+ N + + R +LR FP G ++ + RRAKY Sbjct: 1 MPELPEVETTVRGLTPVLANERLMLVEPRRADLRHPFPADLRQRMTGARVTSLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I HLGMSG + I+ P + H+H+ + R+ NDPR Sbjct: 61 LIDTDRGDTMIFHLGMSGRWRID------PGEPQTHDHLLLETEAGR-----RLALNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+DL T+ YPP +GPEP FNA YL + + + +K LL+Q+IVAG+ Sbjct: 110 RFGFVDLWSTADLASYPPFLAMGPEPLSEDFNAAYLMERLEGRAAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R + K L +L++ I+ VL AI AGGSSLRDYV Sbjct: 170 GNIYVCEALHMAGIAPGRAGGQIS------KARLTRLVEAIRAVLNAAILAGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG ++RR +GRSTFYC CQ+ Sbjct: 224 RPDGELGYFSKEWRVYGREGEACE--CGAIVRRRSDSGRSTFYCASCQR 270 >gi|73540052|ref|YP_294572.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] gi|90101314|sp|Q476F5|FPG_RALEJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72117465|gb|AAZ59728.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha JMP134] Length = 284 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 156/295 (52%), Gaps = 19/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVTVRHRGLRWPVEDDLEARLAGRLVRRIERRGKYL 60 Query: 61 LIE-----LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+E + ++VHLGM+G+ + + H+H+ + L + ++ + Sbjct: 61 LLECVDEATDDAGWLLVHLGMTGTLRVLPDAPPA----GAHDHLDLVLDDAGGSRIV-LR 115 Query: 116 YNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + S +P LR LG EP D+ F+ +L +++ +K LL Sbjct: 116 FRDPRRFGAVLWSPLSEAMLPGHPLLRGLGIEPFDSHFDGSWLHRHTRGRSAAIKTVLLA 175 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 IV G+GNIY E+L+RA + P L +L Q +++ L AI+ GG Sbjct: 176 GNIVVGVGNIYASESLFRAGIRPTTPAGRLSLAR------CERLAQSVRETLAQAIERGG 229 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+LRD+V DG+ GYFQ VY + GEPC CG +R+IVQ RSTFYCT+CQ Sbjct: 230 STLRDFVGSDGASGYFQLECFVYDRAGEPC-KVCGTPVRQIVQGQRSTFYCTHCQ 283 >gi|134296994|ref|YP_001120729.1| formamidopyrimidine-DNA glycosylase [Burkholderia vietnamiensis G4] gi|166215619|sp|A4JHZ1|FPG_BURVG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|134140151|gb|ABO55894.1| DNA-(apurinic or apyrimidinic site) lyase [Burkholderia vietnamiensis G4] Length = 275 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPADLAEQLRAREVLAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + + +H+H+ + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPVAGVP--VAAKHDHIDWIFDE------FVLRFRDPR 111 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F L + + ++K ALL +V Sbjct: 112 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ Y + G PC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFAYDRAGLPC-RVCGTPIRQIVQGQRSTYFCPTCQR 275 >gi|119387217|ref|YP_918272.1| formamidopyrimidine-DNA glycosylase [Paracoccus denitrificans PD1222] gi|166215642|sp|A1BAN2|FPG_PARDP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119377812|gb|ABL72576.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccus denitrificans PD1222] Length = 281 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + R +LR+ P G +++ + RR+KY+ Sbjct: 1 MPELPEVETVRRGLQPHLEGRVIARAEARRPDLRWPLPPDLVQVLTGARVVALRRRSKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIY 116 L ELE S+++HLGMSG +IE S ++ P+H+HV + N + R+ + Sbjct: 61 LAELEDRGSLLLHLGMSGRMLIEGESQGDFHRDPAILPRHDHVVL-----WNDQGTRITF 115 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ND RRFG +DLV + +P L LGPEP ++F A L F + +K ALL+Q+I Sbjct: 116 NDARRFGMVDLVPPGAE--HPLLAHLGPEPLSDAFTAEALAAAFAGRRMPVKAALLDQRI 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV EAL+RA + P R ++ + L+ ++ VL +AI AGGSSL Sbjct: 174 VAGLGNIYVSEALYRAGIDPRRLAGAVTAPE------VAALVGHVRAVLEEAIAAGGSSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+ G +GYFQ++F VYG+ G PC C ++RIVQ+GRS+F+C CQ+ Sbjct: 228 RDHRQATGELGYFQHSFRVYGREGAPCPTPGCTGTVQRIVQSGRSSFFCPLCQQ 281 >gi|170717422|ref|YP_001783367.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] gi|189044662|sp|B0UUX0|FPG_HAES2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168825551|gb|ACA30922.1| formamidopyrimidine-DNA glycosylase [Haemophilus somnus 2336] Length = 270 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + LR++ S + KI++++RRAKYL Sbjct: 1 MPELPEVETTLKGVSPYLKGFIIEKIVVRNPKLRWEVSKELSTF-KHVKILNLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I +H+H I + N + YND R Sbjct: 60 IIHTEQGY-IIGHLGMSGSVRIVPHDNPVN----KHDHFDIVMNNGK-----LLRYNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T+ ++ LGPEP +FN+ YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTNNLSEFHLFFKLGPEPLSETFNSTYLFKKSRQKSTALKTFLMDNSVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ L P + ++L + +L+ I++VL +AI+ GG++L+D++ Sbjct: 168 GNIYANEILFLCGLHPQKIAKTLTKKQT------EQLVFTIKQVLNEAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I+ I+ R++F+C CQK Sbjct: 222 QPDGRPGYFAQKLLVYGNKDKPC-PRCGTKIKSIIIGQRNSFFCPQCQK 269 >gi|15672335|ref|NP_266509.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] gi|13878494|sp|Q9CIK4|FPG_LACLA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|12723222|gb|AAK04451.1|AE006272_5 formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis Il1403] Length = 272 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLAKIHPEKVANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|74316401|ref|YP_314141.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Thiobacillus denitrificans ATCC 25259] gi|90101322|sp|Q3SLR9|FPG_THIDA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|74055896|gb|AAZ96336.1| formamidopyrimidine-DNA glycolase [Thiobacillus denitrificans ATCC 25259] Length = 270 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + + LR+ P RG + ++RR KYL Sbjct: 1 MPELPEVETTRAGLSPRLQGRVLTRVIVREPRLRWPIPPDLDTQLRGLTLHGLARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G ++ +VHLGMSGS + + +H+HV + T + DPR Sbjct: 61 LFDF-GAVTQLVHLGMSGSLRLTEPAEPAA----RHDHVDWRFDDGTILR-----LRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E + +P L LGPEP +F+A YL Q ++ + +K +++ +V G+ Sbjct: 111 RFGAVLLTENAP--GHPLLAGLGPEPLSTAFDAAYLHTQCQRRKTAIKPLIMDAHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P L + +L I++VL AI AGGSSLRDYV Sbjct: 169 GNIYASESLFHAGIRPGVAAHRLSRA------ACARLADAIKQVLTAAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +GYFQ VY + PC C IRRIVQA R++FYC CQ+ Sbjct: 223 QSSGELGYFQLQTRVYDREDAPC-RRCATPIRRIVQAQRASFYCPTCQR 270 >gi|77461572|ref|YP_351079.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens Pf0-1] gi|90101312|sp|Q3K566|FPG_PSEPF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77385575|gb|ABA77088.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----MPAAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M ++ + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SNDPLNHELLIRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAKGISRAR------YLKLAIEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R + R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEHC-KVCGTGLREMKLGQRASVWCPRCQ 269 >gi|229916391|ref|YP_002885037.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] gi|259647145|sp|C4L470|FPG_EXISA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229467820|gb|ACQ69592.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sp. AT1b] Length = 275 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 144/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + T+ + + + R P + G+ I DV RR K+ Sbjct: 1 MPELPEVETVCRRLRPAVSGKTIQSVDVLDPKIIRGLDPEEWVHHLIGETITDVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L +L ++ HL M G F + +H HV I+ T+ + + YND Sbjct: 61 ILFKLTNGY-LVSHLRMEGKFF----PYETATEPVKHTHVVITFTDQST-----LHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVA 178 R+FG M+L + PPL L EP D L + K +K ALL+Q I Sbjct: 111 RKFGTMELRTNETIHTTPPLSLLAYEPFDERVTTEALHRRLERMKTRAIKTALLDQSIFV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RA + P R SL + + ++ E VL +AI+ GGS++R Sbjct: 171 GLGNIYVDETLFRAGVHPTRPAASLSREE------VDRVRTEAVAVLNEAIERGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG+ G FQ VYG+TGEPC CG I ++ GR T YC +CQ+ Sbjct: 225 YADPDGATGTFQERLYVYGQTGEPC-RRCGHEIEKMKLGGRGTHYCPHCQQ 274 >gi|148557778|ref|YP_001265360.1| formamidopyrimidine-DNA glycosylase [Sphingomonas wittichii RW1] gi|166198754|sp|A5VG06|FPG_SPHWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148502968|gb|ABQ71222.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingomonas wittichii RW1] Length = 270 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L ++ +T + R +LR FP G I + RRAKY Sbjct: 1 MPELPEVETTVRGLRPPLEGRRLTRVETRRADLRRPFPADLRQRMTGATITGLGRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + ++ HLGMSG + I+ P + H+H+ + + DPR Sbjct: 61 LIETDRGDVMVFHLGMSGRWRID------PSEIGAHDHLVLETDEGRT-----LSLCDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + P + LGPEP +L + + +K LL+Q+IVAG+ Sbjct: 110 RFGSVDLVRGEELAGFGPFKALGPEPLGPDLTGAHLAGALEGRVAPIKAMLLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL ++P + K L +L+ I++VL AI+AGGS+LRDY Sbjct: 170 GNIYVCEALHMTGIAPTTMAGRIA------KKRLDRLVDSIREVLAAAIEAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC +CG +IRR V GRSTFYC CQK Sbjct: 224 RPDGELGYFAKQWRVYGREGEPC--HCGTVIRRRVDGGRSTFYCPKCQK 270 >gi|326403916|ref|YP_004283998.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] gi|325050778|dbj|BAJ81116.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Acidiphilium multivorum AIU301] Length = 275 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTIDSAPLP-------HQHLTLETDDGAI-----IGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGRAG------RLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC C I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPC-ERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|330505432|ref|YP_004382301.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] gi|328919718|gb|AEB60549.1| formamidopyrimidine-DNA glycosylase [Pseudomonas mendocina NK-01] Length = 270 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDIRLSGQRIECVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E S+I HLGMSGS + A +H HV I L + + Y DPR Sbjct: 61 LIKAEVG-SLIGHLGMSGSLRLVECGLAAA----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + ++ L LGPEP F+ L ++ +K +++ +V G+ Sbjct: 111 RFGA--LLWSEDPLRHELLSKLGPEPLGGLFDGERLFQMSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 169 GNIYATEALFAAGIDPRREAGSISRAR------YLRLAEEIKRILTHAIERGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ YG+ GE C CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFAYGRGGEFC-KVCGSTLREVKLGQRASVYCPKCQR 270 >gi|51247145|pdb|1PJI|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A 1,3 Propanediol Containing Dna gi|51247149|pdb|1PM5|A Chain A, Crystal Structure Of Wild Type Lactococcus Lactis Fpg Complexed To A Tetrahydrofuran Containing Dna gi|75765461|pdb|1XC8|A Chain A, Crystal Structure Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A Fapy-Dg Containing Dna gi|218681752|pdb|3C58|A Chain A, Crystal Structure Of A Complex Between The Wild-Type Lactococcus Lactis Fpg (Mutm) And A N7-Benzyl-Fapy-Dg Containing Dna Length = 271 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 145/288 (50%), Gaps = 18/288 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 1 PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLI 60 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 E+ + +I HL M G + + + +H+H+T+ + ++IY D R+ Sbjct: 61 FEIGDDFRLISHLRMEGKYRLATLDAPR----EKHDHLTMKFADG------QLIYADVRK 110 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG +L+ T Y + +GPEP F+ + K +K LL Q +VAG+G Sbjct: 111 FGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLG 170 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 171 NIYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY-S 223 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 224 ALGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|237806907|ref|YP_002891347.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] gi|237499168|gb|ACQ91761.1| formamidopyrimidine-DNA glycosylase [Tolumonas auensis DSM 9187] Length = 276 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M+ + V + + LR+ P G+ + + RRAKYL Sbjct: 1 MPELPEVEVSRLGITPWMEGIVVERVVIRHPRLRWPIPSEI-RLLEGQPLRQIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + I+HLGMSG I +H+HV + L N + ++DPR Sbjct: 60 LLR-STLGTAILHLGMSGRLRILPIGTPA----EKHDHVDLELANGK-----LLRFHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L YQ+P L+TLGPEP ++F A YL + K S +K L++ ++V G+ Sbjct: 110 RFGA-LLWTAEDPYQHPLLKTLGPEPLTDAFTADYLWQRSRKPRSAIKPWLMDNRVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R SL L+ ++KVL AI GG++LRD++ Sbjct: 169 GNIYANEALFMAHIHPKRAVNSLTPEESQ------ALVAAVKKVLARAITQGGTTLRDFM 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G+PC + C + + RS+ YC CQ Sbjct: 223 RTDGKPGYFVQELLVYGRAGQPC-TVCAHPLEELRLGQRSSVYCPICQ 269 >gi|167585427|ref|ZP_02377815.1| formamidopyrimidine-DNA glycosylase [Burkholderia ubonensis Bu] Length = 276 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLGVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + T+ A P +H+H+ + + Y DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPTAGAPPAAA-KHDHIDWIFDE------FVLRYRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + +P L +LG EP +F+ L + ++ ++K ALL IV Sbjct: 113 RFGAVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRSVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTAAAGKVSLPR------YERLADAVRATLADAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + G PC CG +R+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGLPC-RVCGTPVRQIVQGQRSTYFCPTCQR 276 >gi|241896103|ref|ZP_04783399.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] gi|241870617|gb|EER74368.1| formamidopyrimidine-DNA glycosylase [Weissella paramesenteroides ATCC 33313] Length = 278 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ TV + + F F A R + I+ + RR KY Sbjct: 1 MPELPEVETVRRGLTNLVAGRTVESTEVRWEKTVGGFTAEEFDQALRNQTILKIDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++ HL M GS+ K +H+ VT L + + + Y D Sbjct: 61 LLFRFTGGITMVSHLRMEGSYYTVPAGT----KPGKHDLVTFHLDHGVD-----LFYRDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M++V L T+GPEP +++ Y+ +F K ++K LLNQ +AG Sbjct: 112 RKFGRMNIVPNDQVMTVAGLATIGPEPTEDTLTLDYMISEFGKSKMHVKPFLLNQNHIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E LW++K+ P+ L D L L + I L A + G+++ + Sbjct: 172 LGNIYVDETLWQSKIHPLTAANQLT------TDELAILRKNIIAELARATEHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G+ G FQN VYG+ GEPCL CG+ + +I A R T YC CQ Sbjct: 226 TNVFGNAGEFQNELQVYGRVGEPCL-RCGEPLVKIKVAQRGTTYCPVCQ 273 >gi|121534306|ref|ZP_01666130.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] gi|121307076|gb|EAX47994.1| formamidopyrimidine-DNA glycosylase [Thermosinus carboxydivorans Nor1] Length = 274 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE IRR L + + + + L ++ F A G+KI + RR KY Sbjct: 1 MPEMPEVETIRRTLADKVVGRRIEAVKIDLPRLVKWPSVSEFKEAVTGRKIERLDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL LE +L ++VHL M+G ++ + H+ L NN +IY D Sbjct: 61 LLFRLEHDLVMVVHLRMTGRLYYVPAG----YQHDKFTHIVFDLDNND-----ALIYADS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + + + + L T+GPEP F Y K+ S++K LLNQ+++ G Sbjct: 112 RTLGTLYAIHLADLGRIAGLATMGPEPLSPEFTFDYFRMMLKKRQSSIKAVLLNQQLIGG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E+L A ++P R SL ++ KL + I +V+ + I GG+S RDY Sbjct: 172 LGNIYVDESLAVAGIAPTRPAASLSEDETQ------KLYRAINQVIEEGIAHGGTSFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G Q+ VYG+ G+PC CG I R AGR T +C CQ+ Sbjct: 226 RDGVGQTGSHQHYLRVYGRKGQPCQ-RCGMPIVRTEVAGRGTHFCPICQR 274 >gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM 2228] Length = 276 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 154/293 (52%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPELPEVE + + L +++N VT++ + KN+ +P + F G KI V RR Sbjct: 1 MPELPEVETVVKGLGPLIRNKKVTEVEIREKNMI-AYPKNNIKAFKKDLLGAKIEKVKRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY++IEL ++++HL M+G +++ + +H HV SL + + + Sbjct: 60 GKYIIIELNNYKNLVIHLRMTGKLLVKEVKDFRD----KHTHVIFSLDDGQE-----IRF 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 N+ R+FG + L++ Q L TLGPEP ++ + F + + +K+ LLNQK Sbjct: 111 NNIRKFGRVYLIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLLLNQKF 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+RA + P R L ++ + ++++L I GG+S Sbjct: 171 IAGIGNIYADEILFRAAILPDRTADQLSESEK------EAIYYNMREILQKGIIYGGTSF 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYV+ G G FQ V+ + + C CG I++I +GRST++C CQK Sbjct: 225 SDYVNAFGEKGSFQEELRVHQREEKKCY-QCGTKIKKIKISGRSTYFCPQCQK 276 >gi|148260719|ref|YP_001234846.1| formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] gi|166215604|sp|A5FZ95|FPG_ACICJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146402400|gb|ABQ30927.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Acidiphilium cryptum JF-5] Length = 275 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 162/294 (55%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + L R +LR+ P F G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLAAKLEGRRLARVVLARPDLRWPIPEGFVQFLSGARVEGFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ LS+++HLGMSG I+ H H+T+ + + + DPR Sbjct: 61 FMRLDRALSVLIHLGMSGRMTIDSAPLP-------HQHLTLETDDGAV-----IGFVDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + + LGPEP D++F+ L K + +K ALL+Q +VAG+ Sbjct: 109 RFGALDLVATAAEDSHRLIAGLGPEPLDDAFSPATLASALEGKKTPIKAALLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA + P R ++ + +L+ I+ L DAI AGGSSLRDYV Sbjct: 169 GNIYVSEALFRAGILPHRLAGTIGRGRAG------RLVPAIKATLTDAIAAGGSSLRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYCTYCQK 289 G +GYFQ+A+ VY + G+PC C I R VQ+GR+T++C QK Sbjct: 223 QPSGELGYFQHAWKVYDRAGQPC-ERCPGPAACAGISRTVQSGRATYFCARTQK 275 >gi|15674603|ref|NP_268777.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71910221|ref|YP_281771.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] gi|21362547|sp|Q9A131|FPG_STRP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|13621714|gb|AAK33498.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M1 GAS] gi|71853003|gb|AAZ51026.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS5005] Length = 275 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|300173771|ref|YP_003772937.1| formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] gi|299888150|emb|CBL92118.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc gasicomitatum LMG 18811] Length = 287 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ +T + L L F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIVGGQITQVHLLYPKLINGDSQAFITGVTNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E + + +H + L + RV YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVE----SIETRPYKHTEIIFEL-----LDQRRVFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + P L LGPEP + Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMTLTNTHFEINDVPSLAKLGPEPTEKDLALDYMVDIFSRSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T++L L L + I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTKTLTVRE------LSLLRENIIAEMKRAIAHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTTMVKIKVGQRGTTFCPACQ 273 >gi|119470584|ref|ZP_01613287.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] gi|119446285|gb|EAW27562.1| formamidopyrimidine DNA glycosylase [Alteromonadales bacterium TW-7] Length = 269 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +KN VT + ++ ++R+ P G + ++ RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHIKNQVVTKVNIYNASMRWPVPDDVYQ-LEGLTVTNIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E +I+ HLGMSG+ + S +H+HV N+ + NDPR Sbjct: 60 LLHCELGSTIL-HLGMSGNLRVVDKSEPLK----KHDHVEFVFANDK-----ALRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L LGPEP ++F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEV--HKLLSKLGPEPLTDNFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PCL+ C + I RST +C++CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCLT-CDNELEEIRLGQRSTVFCSHCQK 269 >gi|304310176|ref|YP_003809774.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] gi|301795909|emb|CBL44110.1| Formamidopyrimidine-DNA glycolase [gamma proteobacterium HdN1] Length = 270 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR ++ ++ + V + + + LR+ G+ + D++RR KYL Sbjct: 1 MPELPEVETTRRGILPHIQGLRVQQVIVRQPKLRWPVSPELVQ-LAGEPLRDIARRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + + HLGMSGS I + H+H+ N + Y+DPR Sbjct: 60 LFSFDRGIVL-AHLGMSGSLRILESEKPAD----AHDHLDWVFENG-----ITLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L +P L +LGPEP + F A YL + +K+ ++N +V G+ Sbjct: 110 RFGA-WLWWDGESTGHPLLESLGPEPLEPDFTAQYLYRTSRGRKVPVKSFVMNSHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A +SP+R + + +L++ I+K+L D+I GG++LRD+V Sbjct: 169 GNIYANEALFSAGISPLRAAGRIS------LERYQRLVESIRKILEDSIRQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ G PCL CG+ + I R+T +C CQ Sbjct: 223 GGDGKPGYFQQTLQVYGRAGAPCLK-CGESLCEIRLGQRTTVFCKVCQ 269 >gi|19745616|ref|NP_606752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|56808814|ref|ZP_00366528.1| COG0266: Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes M49 591] gi|94988038|ref|YP_596139.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94991924|ref|YP_600023.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209558972|ref|YP_002285444.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] gi|24211705|sp|Q8P250|FPG_STRP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|19747744|gb|AAL97251.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS8232] gi|94541546|gb|ABF31595.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS9429] gi|94545432|gb|ABF35479.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS2096] gi|209540173|gb|ACI60749.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes NZ131] Length = 275 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|332522287|ref|ZP_08398539.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] gi|332313551|gb|EGJ26536.1| DNA-formamidopyrimidine glycosylase [Streptococcus porcinus str. Jelinkova 176] Length = 273 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ V + + + F++ G++I+ + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVIGKVVASVTVKVPKMIVSNSETFASDLIGQEILSIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +I HL M G +++ + T ++Y D R Sbjct: 61 IFNFS-DLVMISHLRMEGKYLLFEDGIPENKH---------FHFFFHFTDGSTLVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ Y R LGPEP N F +K LL QK+V G+ Sbjct: 111 KFGTLELLARDGLDLYFSQRKLGPEPTKNEFKLKAFEAALRLSKKPIKPLLLEQKLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P+R +L + + ++ + +L A++ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPLRLASNLKKVE------MKRIHDQTIVILNFAVNKGGSTIRTYQ 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+ G PC CG +I +I GR T +C CQK Sbjct: 225 NTLGMNGSMQDYLQVYGQNGRPC-PRCGTVIEKIKVGGRGTHFCPKCQK 272 >gi|152977704|ref|YP_001343333.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] gi|171472905|sp|A6VKA1|FPG_ACTSZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150839427|gb|ABR73398.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] Length = 270 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 143/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + + + I + + LR++ S +K+ +SRRAKYL Sbjct: 1 MPELPEVETAKNGITPYLDGFYIEKIIVRQPKLRWEVSPELSQ-ISHQKVTALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I II HLGMSG+ I +H+H+ I + N + YNDPR Sbjct: 60 IIHTAQGY-IIGHLGMSGAVRIVSPDSPVN----KHDHLDIVMNNGKIMR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T ++P LGPEP FN+ YL + KK + +K+ ++N +V GI Sbjct: 110 RFGA--WFWTENLDEFPLFAKLGPEPLSGEFNSDYLFKKSRKKPTAVKSFIMNNAVVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L++ L P + + + L + I+K L AI GG++L+D++ Sbjct: 168 GNIYANEVLFQCGLHPEKPAGKITKTQA------ALLTETIKKELTRAIAQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +YGK G PC CGQ I R+++ C +CQK Sbjct: 222 QPDGKPGYFVQELQIYGKKGCPC-PKCGQKIESFTVGQRNSYVCLHCQK 269 >gi|228478179|ref|ZP_04062787.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] gi|228249858|gb|EEK09128.1| formamidopyrimidine-DNA glycosylase [Streptococcus salivarius SK126] Length = 273 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G + + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSVEVKVPKMIKTSYDSFLHDLPGLTVQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ +H H+ +L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLLFTDQVPAN----KHFHLFFTLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + Y + LGPEP +F +K+ LL QK+VAG+ Sbjct: 111 KFGTFDLLAKNQEEVYFARKKLGPEPTKKAFKYAPFERALMTSAKPIKSLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELS------KAAMKRVHDRTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASTIEKIKLGGRGTHLCPHCQK 272 >gi|253999709|ref|YP_003051772.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] gi|253986388|gb|ACT51245.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. SIP3-4] Length = 272 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L + V + + LR+ P + + ++RRAKY+ Sbjct: 1 MPELPEVETTMRGLAP-LVGQPVAKVVIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +++HLGMSG + A+ +H+H + + + DPR Sbjct: 60 LAQFDTGY-LMLHLGMSGRICL----LAQDEPAAKHDHFDLHFADGQVLR-----LRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + Q+ L LGPEP +++F+ +L QF +++ +KNA+++ +V G+ Sbjct: 110 RFGAV-LWAGAEPEQHALLSVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P L + +L EI+ L DA+ AGGSSLRD+ Sbjct: 169 GNIYASESLFRARIHPQTPANQLSR------QACDRLAAEIKATLTDALAAGGSSLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYFQ + Y +TGE C C I+ + RSTF+C CQ Sbjct: 223 GADGNPGYFQQEYFTYARTGEAC-KICSTPIQNVRLGQRSTFFCPRCQ 269 >gi|167835381|ref|ZP_02462264.1| formamidopyrimidine-DNA glycosylase [Burkholderia thailandensis MSMB43] Length = 276 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVQRVDVRTAMLRWPVPAGFAELLRLREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + + +P L +LG EP +F+ L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFKRTRGRTVSVKQALLAGDIVV 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L AI+ GGS+LRD Sbjct: 173 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLAAAIERGGSTLRD 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAAIRQIVQGQRSTYFCPNCQR 276 >gi|42523639|ref|NP_969019.1| hypothetical protein Bd2176 [Bdellovibrio bacteriovorus HD100] gi|39575845|emb|CAE80012.1| fpg [Bdellovibrio bacteriovorus HD100] Length = 271 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + L RK+LR P + G+ + + RRAKY Sbjct: 2 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + A P H+H+ + + R+ Y DP Sbjct: 62 LLLWTPKG-AMLSHLGMTGTWRV-----AVPGDERLHDHIYLHFS-----GDLRLAYRDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ LK +P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 111 RRFGCFDFVQDPLK--HPKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 169 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 223 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 271 >gi|170016692|ref|YP_001727611.1| formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] gi|169803549|gb|ACA82167.1| Formamidopyrimidine-DNA glycosylase [Leuconostoc citreum KM20] Length = 280 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + + F + RR KYL Sbjct: 1 MPELPEVETVRRGLKKLIIGGHIVQVKLPYPKVISGDSNAFITGVMNASFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E +H + L++N V YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPREATPH----KHTEIIFELSDNR-----AVFYNDTR 111 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T K P L LGPEP + + Y+ F K +K+ LL+Q +AG Sbjct: 112 RFGRMVLATTGHEKIDVPSLAKLGPEPTADDLSLDYMVTAFAKSKKPVKSFLLDQNQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P T SL + +L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPTNSLSRT------VLAVLRQNIIDEMARAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG ++ +I R T +C +CQ Sbjct: 226 SNVFGEVGQFQNELQAYGRVGQPCL-RCGTIMSKIKVGQRGTTFCPFCQ 273 >gi|50083930|ref|YP_045440.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] gi|81695930|sp|Q6FE90|FPG_ACIAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49529906|emb|CAG67618.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ADP1] Length = 272 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ N V + + LR+ P S G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLL-NQRVKSVQVRDSRLRWPIPEDIS-RLAGQRLTSLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + + +H+H+ ++ + T + Y+DPR Sbjct: 59 LAEFETDQ-MLWHLGMSGSFRV----ATAADELRKHDHLILTFDDGTELR-----YHDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + Q L LGPEP FNA YL + K +K AL++ +V G+ Sbjct: 109 RFGCILWL--NEESQSKLLNPLGPEPLSEDFNADYLYQKLKSKQVGIKIALMDNHVVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + SL + + L+QEI+++L AI+ GGS+LRDY Sbjct: 167 GNIYATESLFNLGIHPAQPASSLSKPQ------ILALVQEIKRILKFAIELGGSTLRDYT 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 221 NAMGENGYFQQTLLAYGRAGEMCV-NCETPLENLKLGQRASVFCPQCQ 267 >gi|90101295|sp|Q6ML45|FPG_BDEBA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 270 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 165/290 (56%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV-TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++K+ + + L RK+LR P + G+ + + RRAKY Sbjct: 1 MPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQPLTSIERRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ +++ HLGM+G++ + A P H+H+ + + R+ Y DP Sbjct: 61 LLLWTPKG-AMLSHLGMTGTWRV-----AVPGDERLHDHIYLHFS-----GDLRLAYRDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG D V+ LK +P L LGPEP + FN L + K+ LK AL++QK+V G Sbjct: 110 RRFGCFDFVQDPLK--HPKLADLGPEPLEAEFNGPLLWEKLRGKDVALKVALMDQKVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R L + L+ EI+K+L +I AGGSS+ D+ Sbjct: 168 VGNIYASEALFAAGIKPTLPARKLSLERAS------LLVGEIKKILSQSIKAGGSSISDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYFQ +F VYG+ EPC++ CGQ ++ V GR+TF+C+ CQK Sbjct: 222 AQASGESGYFQTSFRVYGRDKEPCVT-CGQQVKSKVLGGRNTFWCSRCQK 270 >gi|94495382|ref|ZP_01301962.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] gi|94424770|gb|EAT09791.1| formamidopyrimidine-DNA glycosylase [Sphingomonas sp. SKA58] Length = 270 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 118/289 (40%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L V++ +T + R +LRF P G + +SRRAKY Sbjct: 1 MPELPEVETTVAGLRSVLQGSRLTRVEPRRADLRFPIPVDLRQRMTGAIVTGLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + +I HLGMSG + I+ P + H+H+ + + NDPR Sbjct: 61 LIETDRGDMMIFHLGMSGRWRID------PAEIGAHDHLLVETDQGRI-----LSLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV Y P +GPEP + F+ L + +++K ALL+Q+IVAG+ Sbjct: 110 RFGSLDLVRADAWTGYAPFTRMGPEPLGDDFSPAMLATALKGRATSIKAALLDQRIVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A ++P R + L L++ I+ VL AI AGGS+LRDY Sbjct: 170 GNIYVCEALNMAGIAPTRAAGRIGAAR------LALLVEAIRTVLTAAITAGGSTLRDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GEPC CG +RR V GRSTFYC CQK Sbjct: 224 RPDGELGYFSKQWRVYGREGEPCP--CGGTVRRRVDGGRSTFYCPTCQK 270 >gi|226310993|ref|YP_002770887.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|254789429|sp|C0Z7Z0|FPG_BREBN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226093941|dbj|BAH42383.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 276 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 142/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L ++ T+ + +H + D F + G+ I D+ RRAK Sbjct: 1 MPELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++ L ++ HL M G + + +H HV T+ T + Y D Sbjct: 61 FIQFFL-NEDVLVSHLRMEGRYGVYQADDP----VEKHTHVVFHFTDGTELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MDL + PL LG EP D SF L +++ +K LLNQ+ + Sbjct: 111 VRQFGTMDLFPKGKETTIGPLAKLGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E+L++A + P + L + +L + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDESLFKAGIHPEKPAGKLTDKE------VIRLHESIVSTLQEAVEQGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ + VYG+ E C + CG I R V GR T C CQK Sbjct: 225 YVNGQGEMGMFQQSLLVYGRKDEAC-TKCGAEIIRFVVGGRGTHICPDCQK 274 >gi|94993817|ref|YP_601915.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|139474273|ref|YP_001128989.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] gi|94547325|gb|ABF37371.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10750] gi|134272520|emb|CAM30783.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes str. Manfredo] Length = 275 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|212637669|ref|YP_002314194.1| formamidopyrimidine-DNA glycosylase [Shewanella piezotolerans WP3] gi|226706486|sp|B8CVD1|FPG_SHEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|212559153|gb|ACJ31607.1| Formamidopyrimidine-DNA glycolase [Shewanella piezotolerans WP3] Length = 271 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ ++ + + + VTD+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTKQGVSPYLIDNRVTDLIIRNPSLRWPVP-DIAKQIIGQTIRAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + + IVHLGMSGS I +H+H+ + L + + YNDPR Sbjct: 60 LIDTDAGTT-IVHLGMSGSLRI----LPINSPVEKHDHIDLVLASGKILR-----YNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +++FN+ YL K +K L++ IV G+ Sbjct: 110 RFGAWLWNELP-EQAHPLLAKLGPEPLESAFNSSYLLSALANKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + + L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPQAEAGKVD------AERISILVAEVKQILARAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF VYG+ G+ C CGQ++ I R+T +C+ CQ+ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGDTCTH-CGQLLSEIRLGQRATVFCSICQQ 270 >gi|152994665|ref|YP_001339500.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] gi|189044664|sp|A6VSY6|FPG_MARMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150835589|gb|ABR69565.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MWYL1] Length = 272 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + ++ + + + LR+ S+ G++I +SRR KY+ Sbjct: 1 MPELPEVETTLRGIEPKLVGRSLARVDIRQPKLRWLITPELSSEMVGEEITHLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++IVHLGMSGS H+HV ++ + Y DPR Sbjct: 61 GIHTSKG-TLIVHLGMSGSLYFVPAETPPLF----HDHVDFCFADDDVW----LRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T +++ ++ LGPEP + FNA L + + +K +++ K+V G+ Sbjct: 112 RFGAI-LWTTEDWHEHELIKHLGPEPLSDMFNADMLYVRAKGRKVPIKTFIMDSKVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R ++ K L +L++ I+ VL AI GG++L+D+V Sbjct: 171 GNIYANEALFKAGIRPDRLAGNIS------KARLARLVECIKVVLAAAIKQGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ +VYG+ + C+ C + ++ I QA RST +C CQ Sbjct: 225 GGDGKPGYFKQELAVYGRANKACV-ICSKPLKEIRQAQRSTVFCINCQ 271 >gi|300313204|ref|YP_003777296.1| formamidopyrimidine-DNA glycosylase [Herbaspirillum seropedicae SmR1] gi|300075989|gb|ADJ65388.1| formamidopyrimidine-DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ TV+ + + LR+ FP A RG+ I RR KYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++IVHLGMSG I A +H+H + + + DPR Sbjct: 61 LIHFDHG-TLIVHLGMSGHLRILPPGIAPQ----KHDHFDLEV------GGQVMRMTDPR 109 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + ++ LR+LG EP + F A L Q +++ +K LL IV Sbjct: 110 RFGAILWHDLADGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L++A++ P + +L Q I++ L AI+ GGSSLRD Sbjct: 170 GVGNIYASESLFKARIHPKTAAGKISLPR------YERLAQAIRETLAAAIEQGGSSLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ ++G GYFQ + VY +TGE C C IR+I Q RSTFYC CQK Sbjct: 224 FIAVNGQSGYFQQNYFVYNRTGEAC-RICATPIRQIKQGQRSTFYCVSCQK 273 >gi|170744299|ref|YP_001772954.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] gi|229541076|sp|B0UR68|FPG_METS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|168198573|gb|ACA20520.1| formamidopyrimidine-DNA glycosylase [Methylobacterium sp. 4-46] Length = 297 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 169/299 (56%), Gaps = 16/299 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + L R +LRF P F+A G+++ +SRRAKYL Sbjct: 1 MPELPEVETVRRGLEPALVGARFTTVHLARPDLRFPLPARFAARLTGQRVEALSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----------QHNHVTISLTNNTNTK 110 + +L ++I+HLGMSG F + + +H+HV +L+N Sbjct: 61 VADLSSGDALIMHLGMSGRFDVVFPDGRQLSPGEFYLEGAPGQAKHDHVVFALSNGA--- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RV YND RRFGFMDLV + +G EP + + + F + + LK A Sbjct: 118 --RVTYNDVRRFGFMDLVRRAELETCRHFAGMGIEPLGSDLSGEAVARLFRGRRTPLKAA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+++AG+GNIYVCEAL RA+L P +L G P +L Q I+ VL +A+ Sbjct: 176 LLDQRLIAGLGNIYVCEALHRARLHPEAAAGTLADAAGRPTRAAARLAQVIRDVLTEAVA 235 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQ 288 AGGS+LRDY H DG+ G FQ+ F VY + G C + C +RRIVQAGRSTFYC CQ Sbjct: 236 AGGSTLRDYAHTDGTQGAFQHRFRVYDREGLACTARGCRGRVRRIVQAGRSTFYCETCQ 294 >gi|89094942|ref|ZP_01167873.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] gi|89080808|gb|EAR60049.1| formamidopyrimidine-DNA glycosylase [Oceanospirillum sp. MED92] Length = 270 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + TVT++ + NLR+ P + +GK+I V RR KY+ Sbjct: 1 MPELPEVETTCRGISPHTVKKTVTELVIRNPNLRWPVPDFLESRVQGKQINSVGRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++++ +I HLGMSGS + + +H+HV L++ + DPR Sbjct: 61 LLQMDEGDVMI-HLGMSGSLRMVRSDTP----PLKHDHVDFCLSDGN-----ALRLTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L LGPEP FNA YL + +K +++ ++V G+ Sbjct: 111 RFGSVLWQPKGE--HHELLYKLGPEPLSEGFNAEYLKSCCDGRKVAIKQLIMDSQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ + L L+ EI+KVL AI+ GG++L+D+V Sbjct: 169 GNIYATEALFAAAIDPRRAAGNISRAR------LENLVVEIKKVLSAAIEQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ SVYG+ GEPC+ C + + R+T +C +CQ+ Sbjct: 223 GGDGKPGYFKQELSVYGRKGEPCVK-CMAPLTEVRLGQRATVFCKHCQR 270 >gi|312797351|ref|YP_004030273.1| Formamidopyrimidine-DNA glycosylase [Burkholderia rhizoxinica HKI 454] gi|312169126|emb|CBW76129.1| Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) [Burkholderia rhizoxinica HKI 454] Length = 285 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 146/291 (50%), Gaps = 17/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + + I V RR KYL Sbjct: 10 MPELPEVEVTRRGIEPYVAGRRVQRVEVRNFALRWPVPATLARELEQRVIHKVERRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EL+ +IVHLGM+G+ + A P +H+H+ + + + DPR Sbjct: 70 LFELDDG-WLIVHLGMTGTLRVLRNLPALP-PAARHDHIDWVFDE------FVMRFRDPR 121 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + ++P L +LG EP ++F+ L + + ++K AL+ IV Sbjct: 122 RFGAVLWHPRASGDVLEHPLLASLGVEPFSSAFSGALLHRRTRGRTVSIKQALMAGDIVV 181 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + L I+ L AID GGS+LRD Sbjct: 182 GVGNIYASESLFRAGIRPSTPAGRVSLPR------YELLADAIRATLAAAIDKGGSTLRD 235 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V G GYFQ + VY + G PC + CG IR IVQ RST+YCT CQ+ Sbjct: 236 FVGSHGESGYFQLDYFVYDRAGRPCHA-CGVPIRHIVQGQRSTYYCTRCQR 285 >gi|94989918|ref|YP_598018.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] gi|94543426|gb|ABF33474.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10270] Length = 275 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWVAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|71903062|ref|YP_279865.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] gi|90101320|sp|Q48UU6|FPG_STRPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71802157|gb|AAX71510.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS6180] Length = 275 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPGTASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|258515628|ref|YP_003191850.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] gi|257779333|gb|ACV63227.1| formamidopyrimidine-DNA glycosylase [Desulfotomaculum acetoxidans DSM 771] Length = 275 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 148/290 (51%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L + + T+ ++ +R F G+KI +SRR KY Sbjct: 1 MPELPEVETIKRTLEPKLTGQSFTEALIYLPTIIRIPGIEEFKKEIVGQKIKSISRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L NL++I HL M+G I H +H H+ + L + + + D Sbjct: 61 LTINLSNNLALIFHLRMTGRLIYCHADEPI----VKHTHLILKLDSGNELR-----FIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV L+ LGPEP D F +L + ++ + +K LL+Q +AG Sbjct: 112 RQFGRIWLVSVQKLNTVSGLKDLGPEPFDKKFTREFLKKELRRRRTRIKPLLLDQTFIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA++ P + +L + KL I++VL + I+ G++ RDY Sbjct: 172 LGNIYADEALHRARIHPEKLACNLTARETS------KLFITIREVLEEGINNRGTTFRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q +Y + G+PCL C I RI +GRS+++C CQK Sbjct: 226 VDGNGQAGSNQELLQIYNREGQPCLK-CKTTIVRIKISGRSSYFCPSCQK 274 >gi|254448389|ref|ZP_05061850.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] gi|198262002|gb|EDY86286.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium HTCC5015] Length = 270 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V + + R LR+ P F G +I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPHIEGQLVDSVVVRRDQLRYPVPKDF-EQLMGARIHCVERRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HLGMSGS + +H+H+ I+L N + + Y+DPR Sbjct: 60 IVNTDY-KHWLCHLGMSGSLRLVDGDTPYK----KHDHLDIALANGRHLR-----YHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP + F+ +L + + +KN +++ ++V G+ Sbjct: 110 RFGLV-VWAGTTPQAHPLLCKLGPEPLGHHFSGEHLYAKSRGRKGAVKNFIMDSQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R + L Q IQ VL DAI GG++LRD+V Sbjct: 169 GNIYASECLFLAGIHPKRAAGRVGLAR------YQALAQAIQTVLGDAITQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG GYF VYG+ EPC CG I V RS+++C CQ+ Sbjct: 223 NSDGQPGYFAQQLRVYGRAQEPC-PQCGSPIHTQVIGQRSSYFCKQCQR 270 >gi|56459356|ref|YP_154637.1| formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] gi|81678420|sp|Q5QZC1|FPG_IDILO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56178366|gb|AAV81088.1| Formamidopyrimidine DNA glycosylase [Idiomarina loihiensis L2TR] Length = 270 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ T+ + +H K LR+ P G + VSRR+KYL Sbjct: 1 MPELPEVEVSRLGISPHIEGRTIKSVKVHDKRLRWPVPETVHK-VEGHVLRSVSRRSKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + +I+HLGMSG + +H+H+ I N + NDPR Sbjct: 60 LLQTDNGC-LILHLGMSGKLRVVPAETTHY----KHDHIDIEFDNGQTLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L S + L LGPEP ++FN YL + ++ ++K L++ K+V G+ Sbjct: 110 RFGA-LLYSESDVSGHELLSQLGPEPLTDAFNIDYLFERSRGRSQSVKTFLMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A ++P R + K KL+ I++ L AI+ GG++L+D+ Sbjct: 169 GNIYANEALFKAGINPKRAAGKIS------KVRYQKLVPIIKETLASAIELGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF VYG+ G+ C+ C ++ + RST YCT CQ+ Sbjct: 223 QVDGNPGYFAQKLQVYGRGGKLCM-VCSNRLKEVRLGQRSTVYCTQCQR 270 >gi|330831601|ref|YP_004394553.1| formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] gi|328806737|gb|AEB51936.1| Formamidopyrimidine-DNA glycosylase [Aeromonas veronii B565] Length = 270 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I V RRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPIPGEIQE-LVDLTIHRVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + +I+ HLGMSGS + +H+HV I L N + NDPR Sbjct: 60 LLETDFGTAIL-HLGMSGSLRVLDIGTPA----EKHDHVDIELENGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + L LGPEP ++F+A YL + +++ +K L++ ++V G+ Sbjct: 110 RFGA-LLWTREPAEAHALLAKLGPEPLTDAFSADYLQGRAKGRSTAIKQFLMDNQVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ + L L+ EI++VL +AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAVGNIS------AERLGTLVAEIKRVLAEAIRQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC C ++ R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQPCFH-CHTLLTETRMGQRTTVFCSHCQR 270 >gi|319939215|ref|ZP_08013578.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] gi|319811611|gb|EFW07887.1| DNA glycosylase [Streptococcus anginosus 1_2_62CV] Length = 274 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 147/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++K + + + + F G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLERLVKGKEIEKVDVRYAKMIGTGADAFVLDLPGQSIDAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L N +I HL M G ++ +H+HV T+ +N ++Y D R Sbjct: 61 IFYLT-NWVLISHLRMEGKYLFYPEEAQLT----KHSHVIFHFTDGSN-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP ++ F+ K +K LL+Q +VAG+ Sbjct: 111 KFGTMELLRKERLTSYFTERKLGPEPTESDFHLPPFKAALKKSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LWRA++ P R +SL + + L ++I VL I+ GGS++R Y Sbjct: 171 GNIYVDEVLWRAQIHPARVAQSLNRAE------MKHLREQIIAVLQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC + CG I +I AGR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPC-TRCGHEIEKIKLAGRGTHLCPHCQK 272 >gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] Length = 287 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSQIKQVKLPYPKVITGDSQAFVTGVLNATFHAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L +I+ HL M G + +E + +H + L + + + YND R Sbjct: 61 LLRLSNGHTIVSHLRMEGQYSVEPLGA----QPYKHTEIIFELDD-----QRAIFYNDTR 111 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + L LGPEP D S Y+ F + +K+ LL+Q +AG Sbjct: 112 RFGRMVLTTTDHETDEVQSLGKLGPEPTDVSLTLPYMIDIFSRSKKPVKSFLLDQNKIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L Q I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANELSEIE------LATLRQNIISEMKMAIKNHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG+ G+PCL CG+ + +I R T YC CQ Sbjct: 226 SNVFGEVGQFQNKLEAYGRVGQPCL-RCGEPLVKIKVGQRGTTYCPVCQ 273 >gi|325126151|gb|ADY85481.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 273 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTAVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|225870911|ref|YP_002746858.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] gi|225700315|emb|CAW94602.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. equi 4047] Length = 297 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTIPGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ P P+H H + LT ++Y D R Sbjct: 85 LFDF-GQLVMISHLRMEGKYLLF------PDTVPEHKHFHVFLTMTDG---STLVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ + + R LGPEP +F +K LL+Q +VAG+ Sbjct: 135 KFGTFDLLPKAELAAFFQKRQLGPEPTKQTFQLKTFEAALLASKKTIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW A++ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAARVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQK Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGTSIVKLKVGGRGTHVCPRCQK 296 >gi|266618598|pdb|3GPY|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 3 (Lrc3) gi|266618604|pdb|3GQ4|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 5 (Lrc5) Length = 273 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 P+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Y Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|238855719|ref|ZP_04646015.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260665505|ref|ZP_05866352.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|282934758|ref|ZP_06339998.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] gi|238831665|gb|EEQ24006.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 269-3] gi|260560773|gb|EEX26750.1| formamidopyrimidine-DNA glycosylase [Lactobacillus jensenii SJ-7A-US] gi|281301169|gb|EFA93473.1| DNA-formamidopyrimidine glycosylase [Lactobacillus jensenii 208-1] Length = 275 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +R+ L ++ T+ + N+ F + KKII + R AK+L Sbjct: 1 MPEMPEVETVRKTLTELVLGKTIEKAKVWYPNIIIGDSESFCNQLKKKKIIKIDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L N++I+ HL M G + + K +H+HV T+ T+ + YND R Sbjct: 61 LFRLSDNITIVSHLRMEGKYRLATPHEEKN----KHDHVEFIFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + Q ++ LGPE F Y K N+K LL+Q +V+G+ Sbjct: 112 KFGRMQLVETGTEKQKTGIKKLGPEALSEGFTLSYFQRALRNKKKNIKAVLLDQNVVSGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E LW +K++P R SL + T L + I +V+ AI A G+++ ++ Sbjct: 172 GNIYADETLWLSKINPERPGNSLSCDEITS------LYKAINQVISQAIKAHGTTVHSFL 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G +Q VYG+ G+ C CG +++ AGR T +C CQ Sbjct: 226 DAEGQTGGYQKYLKVYGRAGKKCF-RCGATLQKNHIAGRGTTFCPKCQ 272 >gi|120596900|ref|YP_961474.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] gi|166198752|sp|A1RE25|FPG_SHESW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120556993|gb|ABM22920.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. W3-18-1] Length = 271 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPYLVEQTVIDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVKQLAAALTGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|83855139|ref|ZP_00948669.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] gi|83842982|gb|EAP82149.1| formamidopyrimidine-DNA glycosylase [Sulfitobacter sp. NAS-14.1] Length = 266 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 113/277 (40%), Positives = 165/277 (59%), Gaps = 16/277 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + ++R +LR+ FP +A G+++ + RR+KY+L +L S++VHLGMS Sbjct: 1 MEGEVIARAEVNRPDLRWPFPPDMAARLTGQRVTQLRRRSKYILADLSSGESLLVHLGMS 60 Query: 78 GSFIIEHTSCAKPIKN----PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 G +I + + + +H+HV + N RV +NDPRRFG MDL++T+ Sbjct: 61 GRMLISGDPLGQFVHDHPAPEKHDHVVFHMGNGA-----RVTFNDPRRFGAMDLLDTASA 115 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + L ++GPEP N F+ +L KN+ +K ALL+Q+IVAG+GNIYVCE L+RA Sbjct: 116 DSHKLLSSIGPEPLGNDFHEDHLIAALKGKNTPIKTALLDQRIVAGLGNIYVCETLYRAG 175 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P RK + L+ I+ VL +AI AGGS+LRD+ DG +GYFQ++F Sbjct: 176 IHPARKAGRIAAKRVGS------LVPIIRDVLNEAITAGGSTLRDFKRADGELGYFQHSF 229 Query: 254 SVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ EPC S C I RIVQ+GRS+FYC CQ+ Sbjct: 230 DVYGREAEPCRSEGCTHQIARIVQSGRSSFYCPQCQR 266 >gi|281490900|ref|YP_003352880.1| formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] gi|281374658|gb|ADA64178.1| Formamidopyrimidine-DNA glycosylase [Lactococcus lactis subsp. lactis KF147] Length = 272 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + I + GK I +SRR KYL Sbjct: 1 MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E+ +I HL M G + + + + +H+H+ + T+ ++IY D R Sbjct: 61 IFEIGEKDRLISHLRMEGKYRL----ASLNVPMEKHDHLALKFTDE------QLIYADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ T Y + +GPEP +F+ + K +K LL Q +VAG+ Sbjct: 111 KFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW K+ P + L +++ ++ L I ++L AI GGSS+R Y Sbjct: 171 GNIYVDEVLWLEKIHPEKMANQLTESS------IHLLHDSIIEILQKAIKLGGSSIRTY- 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G Q+ VYGKTGE C+ CG I++I AGR T +C +CQ+ Sbjct: 224 SALGSTGKMQDELRVYGKTGEKCV-RCGNEIQKIKVAGRGTHFCPFCQQ 271 >gi|94309238|ref|YP_582448.1| formamidopyrimidine-DNA glycosylase [Cupriavidus metallidurans CH34] gi|166198737|sp|Q1LRP7|FPG_RALME RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|93353090|gb|ABF07179.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Cupriavidus metallidurans CH34] Length = 297 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 152/307 (49%), Gaps = 30/307 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + D+ + + LR+ A G+ I + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIADVIVRHRGLRWPVEPELEARLTGRIIGRIERRGKYL 60 Query: 61 LIEL--------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 L+E ++VHLGM+G+ + P H+H+ + L Sbjct: 61 LLECLPPADATRAGTGEDAAPGWLLVHLGMTGTLRVY----PAPPAPGAHDHLDLLLAAG 116 Query: 107 TNTKKYR---VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFH 161 +T + + + DPRRFG + + +P L LG EP D F+ +L Sbjct: 117 PDTAEAEPVVLRFRDPRRFGAILWTPLAESDLPGHPLLSRLGIEPFDPRFDGAWLHRGMR 176 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ +K ALL +V G+GNIY E+L+RA + P + L KL + Sbjct: 177 GRSMAIKQALLAGDVVVGVGNIYCSESLFRAGIRPTTQAGRLSLAR------CEKLAVAV 230 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++ L +AI GGS+LRD+V DGS GYFQ VY + GEPC CG IR+I+Q RST Sbjct: 231 RETLAEAIARGGSTLRDFVGSDGSSGYFQLDCFVYDRAGEPC-RICGTPIRQILQGQRST 289 Query: 282 FYCTYCQ 288 FYC +CQ Sbjct: 290 FYCPHCQ 296 >gi|317129904|ref|YP_004096186.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] gi|315474852|gb|ADU31455.1| formamidopyrimidine-DNA glycosylase [Bacillus cellulosilyticus DSM 2522] Length = 278 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ N T+ D+ + + D F G+ D+ RR K Sbjct: 1 MPELPEVETVKRTLKKLILNETIKDVRVSWPKIIKEPDDIDEFRLKLIGQTFHDIKRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L+ L+ + ++I HL M G + I ++ + +H HV L +N + Y D Sbjct: 61 FLVFLLD-DYALISHLRMEGRYGIF----SEDEEPDKHTHVRFILESNKELR-----YRD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L +Y + PL LG EP N F L H +K N+K LL+Q V Sbjct: 111 VRKFGTMHLFPKGEEYNHLPLIQLGVEPFSNEFTPERLYHLLNKTTRNIKATLLDQTYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+RA + P + L N+ + KL + I L +A++ GGSS++ Sbjct: 171 GLGNIYVDEALFRANIHPEVASNELNTND------VKKLHKSIVDTLEEAVNMGGSSIKT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G FQ VYG+ G C CG I + V +GR T C CQK Sbjct: 225 YVNGQGEMGMFQQTLYVYGRKGMEC-KVCGDEIVKNVVSGRGTHTCPSCQK 274 >gi|221135337|ref|ZP_03561640.1| Formamidopyrimidine-DNA glycosylase [Glaciecola sp. HTCC2999] Length = 270 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + T+ I + LR+ P + G I V+RRAKYL Sbjct: 1 MPELPEVEVSRQGIEPGLVGQTIESIQIRTPKLRWPVPTEILST-HGHVIRSVTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + S+I+HLGM+G + ++ +H+H+ I+LTN + +ND R Sbjct: 60 FINTDVG-SVILHLGMTGYLRVF----SQNTPLKKHDHLDINLTNGQCLR-----FNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG L + + + LGPEP + F +L + + +K +++ K V G+ Sbjct: 110 KFGAC-LWQGVDDEPHVLISALGPEPLTDDFTIDHLYTRAQGRTCTVKQFIMDNKHVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ AK++P R + K L I++VL AI GG++L+D+ Sbjct: 169 GNIYANEALFLAKIAPKRAAGKVS------KARYATLTGYIKEVLAAAIAQGGTTLKDFS 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ GYF+ +VYG++GEPC C I+ + R+TF+C CQ+ Sbjct: 223 QVDGNPGYFRLHLNVYGRSGEPC-RRCHTPIKSQMIGQRNTFWCPSCQR 270 >gi|325690758|gb|EGD32759.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK115] Length = 274 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDAVPERT----HAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP + F + +K LL Q +V G+ Sbjct: 111 KFGTMELLRKDQLETYFTARKLGPEPTEADFLLAPFAAALGRSKKPIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA++ P R SL +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARIHPARPAASLKPAEA------KRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGQPCA-RCSSPIEKIKLGGRGTHLCPHCQK 272 >gi|172058210|ref|YP_001814670.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] gi|229541071|sp|B1YKA0|FPG_EXIS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171990731|gb|ACB61653.1| formamidopyrimidine-DNA glycosylase [Exiguobacterium sibiricum 255-15] Length = 276 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 150/291 (51%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + T++ + + H K +R F A + ++I V RR K+ Sbjct: 1 MPELPEVETVRRSLERTVSGKTISSVKVFHPKMIRGMEVAPFVDALKQERIERVERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL + ++ HL M G + + I+ +H HV T+ + + YND Sbjct: 61 LLFTFDR-FYLVSHLRMEGKYF----PYPQAIEKDKHTHVIFRFTDGSE-----LHYNDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVA 178 R+FG M+L E PPL L EP D +F A L KK S +K +LL+Q I Sbjct: 111 RKFGTMELREKETAMSVPPLAQLEREPFDPTFTAEVLAENLIRKKRSPIKTSLLDQSIFL 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+ A++ P+ K +L D + ++ VL A+++GGS++R Sbjct: 171 GLGNIYVDETLFAARVHPLTKAGALT------LDDISRIHAAGVDVLAKAVESGGSTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G FQ +VYG+TG PC CG I +I GR T +C CQ+ Sbjct: 225 YVSPTGK-GEFQLQLAVYGQTGAPC-PRCGTAIEKIKVGGRGTHFCPTCQQ 273 >gi|145301060|ref|YP_001143901.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] gi|166215608|sp|A4STD1|FPG_AERS4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|142853832|gb|ABO92153.1| formamidopyrimidine-DNA glycosylase [Aeromonas salmonicida subsp. salmonicida A449] Length = 270 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + + VT + + LR+ P I VSRRAKYL Sbjct: 1 MPELPEVEVSRQGISPWLTGIKVTRVVVRDGRLRWPVPGEIQE-LVDLTIHRVSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + + + HLGMSGS + + +H+HV I L N + NDPR Sbjct: 60 LLETDFGTADL-HLGMSGSLRVLNIGTPA----EKHDHVDIELANGK-----LLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L + L LGPEP ++FNA YL + +++ +K L++ +V G+ Sbjct: 110 RFGA-LLWTREPAEAHALLAKLGPEPLTDAFNAEYLQGRAKGRSTAIKTFLMDNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ + L L+ EI++VL AI GG++L+D+ Sbjct: 169 GNIYANEALYAAGIHPKRAAGNIS------AERLETLVAEIKRVLASAIQQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+ C C ++ I R+T +C++CQ+ Sbjct: 223 SADGKPGYFVQQLQVYGRGGQACFH-CHTLLSEIRLGQRTTVFCSHCQR 270 >gi|50913780|ref|YP_059752.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] gi|73919596|sp|Q5XDE4|FPG_STRP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50902854|gb|AAT86569.1| Formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS10394] Length = 275 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLKALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAVLLSSKKTIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+PC CGQ I ++ GR T C CQK Sbjct: 225 NTLGADGTMQDYLQVYGQTGKPC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|327463080|gb|EGF09401.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1] gi|327474681|gb|EGF20086.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK408] gi|327490239|gb|EGF22027.1| DNA-formamidopyrimidine glycosylase [Streptococcus sanguinis SK1058] Length = 274 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 140/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F + I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGKTIGQVRVRYAKMIGTGVDSFVHDLPSQTIERIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G +I HL M G ++ + + +H HV +T+ ++Y D R Sbjct: 61 LFYLTGG-VLISHLRMEGKYLFYPDA----VPERKHAHVFFEMTDGGT-----LVYEDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+ Y R LGPEP D F + +K LL Q +V G+ Sbjct: 111 KFGTMELLNKDQLEFYFAARKLGPEPTDADFLLSPFAAALSRSKKLIKPYLLEQTLVVGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EALWRA+L P R + SL + +L ++I +VL I+ GS++R Y Sbjct: 171 GNIYVDEALWRARLHPARPSASLKPAE------VKRLREQIIEVLQLGIEKRGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG PC CG I +I +GR T C CQK Sbjct: 225 NALGEDGTMQDFLQVYGKTGHPCA-RCGSPIEKIKLSGRGTHLCPRCQK 272 >gi|55820699|ref|YP_139141.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116627506|ref|YP_820125.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMD-9] gi|81676735|sp|Q5M576|FPG_STRT2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55736684|gb|AAV60326.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus LMG 18311] gi|116100783|gb|ABJ65929.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Streptococcus thermophilus LMD-9] gi|312278025|gb|ADQ62682.1| Formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus ND03] Length = 273 Score = 294 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIIISHLRMEGKYLLFTDQ----VPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLS------KAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|77166106|ref|YP_344631.1| DNA-formamidopyrimidine glycosylase [Nitrosococcus oceani ATCC 19707] gi|254436060|ref|ZP_05049567.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] gi|90101306|sp|Q3J7U5|FPG_NITOC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|76884420|gb|ABA59101.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani ATCC 19707] gi|207089171|gb|EDZ66443.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus oceani AFC27] Length = 271 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLSLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II+HLGMSGS + T+ + +H+H+ I L N + +NDPR Sbjct: 61 LLSCTQG-TIILHLGMSGSLRLVTTNTP----HGKHDHLDIVLNNGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + +P L LGPEP ++ F+ YL + +++K ++N +IVAG+ Sbjct: 111 RFGSVSWTQANPLH-HPLLEILGPEPLESLFDGHYLFKHSRHRRTSVKAFIMNHRIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L + + VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHPRRSASRIGLAR------YQRLAETTKTVLYNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF N +YG++ PC CG IR R+++YCT CQ Sbjct: 224 TSDGKPGYFANQLQIYGRSAHPC-PICGTPIRLERIGQRASYYCTQCQ 270 >gi|21909883|ref|NP_664151.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28896419|ref|NP_802769.1| formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] gi|25090293|sp|Q8K8D0|FPG_STRP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21904070|gb|AAM78954.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes MGAS315] gi|28811670|dbj|BAC64602.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus pyogenes SSI-1] Length = 275 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|219848489|ref|YP_002462922.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] gi|254789432|sp|B8G9X1|FPG_CHLAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|219542748|gb|ACL24486.1| formamidopyrimidine-DNA glycosylase [Chloroflexus aggregans DSM 9485] Length = 275 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L + + T+ + L + P F+A G++I V RRAK+ Sbjct: 1 MPELPEVETVARSLAPQLLSRTIVGLAKLDWPRMLTPPPPEFAALVAGRRIEAVGRRAKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+ ++ +HL MSG ++ + A + H H + L + R+I++D Sbjct: 61 LLLTLDAGWTLAIHLRMSGHLLVAEPAAA----DAPHVHFALDLDDGR-----RLIFDDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L++++ GPEP + F L + + + +K LL+Q+++AG Sbjct: 112 RKFGRVHLLDSTGLLALD--AAHGPEPLTDDFTPAVLAERLRNRQAPIKALLLDQRLIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EALW A + P+ +L D + L I+ VL DAI GSSLR+Y Sbjct: 170 IGNIYANEALWLAGIHPLTPGGTLT------VDQIAALHHAIRLVLADAIANQGSSLRNY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q F+VY + G+PC C I RIV A RSTF+C CQ Sbjct: 224 RDGYGRRGNYQEHFNVYDRVGKPC-PRCQTAIERIVVAQRSTFFCPLCQ 271 >gi|28948974|pdb|1NNJ|A Chain A, Crystal Structure Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna gi|49258485|pdb|1PJJ|A Chain A, Complex Between The Lactococcus Lactis Fpg And An Abasic Site Containing Dna Length = 271 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 100/287 (34%), Positives = 144/287 (50%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I + GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL M G + + + +H+H+T+ + ++IY D R+F Sbjct: 62 EIGDDFRLISHLRMEGKYRLATLDAPR----EKHDHLTMKFADG------QLIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY-SA 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 LGSTGKMQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|251793910|ref|YP_003008642.1| formamidopyrimidine-DNA glycosylase [Aggregatibacter aphrophilus NJ8700] gi|247535309|gb|ACS98555.1| heptosyltransferase family [Aggregatibacter aphrophilus NJ8700] Length = 271 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +K+ + I + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGVSPYLKDYIIEKIVVRQPKLRWAVSPELTEF-HHVKILDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSG+ I +H+H+ I + N + YNDPR Sbjct: 60 IIHSEQGY-IIGHLGMSGTVRIVPHDSPID----KHDHLDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T ++ LGPEP + FNA YL + KK + LK L++ +V G+ Sbjct: 110 RFGA--WLWTKKLDEFHLFLKLGPEPLSDEFNADYLFKKSRKKMTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ L P++ +L +N +L+ I+ VL AI+ GG++L+D++ Sbjct: 168 GNIYANESLFLCSLHPMKLVANLTRNQ------CERLVDTIKSVLAKAIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG +PC CG I ++ R++FYC CQK Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PRCGTKIESLIIGQRNSFYCPMCQK 269 >gi|332534465|ref|ZP_08410304.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] gi|332036118|gb|EGI72594.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas haloplanktis ANT/505] Length = 269 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 142/289 (49%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++N VT + ++ ++R+ P G + + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHVQNQVVTKVNIYNASMRWPVPDDVYQ-LEGLIVTSIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E +I+ HLGMSG+ + S +H+HV N + NDPR Sbjct: 60 LLHCELGSTIL-HLGMSGNLRVVDKSEPLK----KHDHVEFIFGNGK-----ALRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + L LGPEP + F A + Q K +K +++ +V G+ Sbjct: 110 RFGCCLWQEPGEV--HKLLSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L++A + P R+ + LI I+ L AI GG++L+D+ Sbjct: 168 GNIYANESLFKAGIHPKREAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ G+PC++ C + I RST +C+ CQK Sbjct: 222 QSDGKPGYFAQELLVYGRKGKPCMT-CENELEEIRLGQRSTIFCSNCQK 269 >gi|55822590|ref|YP_141031.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] gi|81676585|sp|Q5M0P0|FPG_STRT1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|55738575|gb|AAV62216.1| formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus CNRZ1066] Length = 273 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L II HL M G +++ + + +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIIISHLRMEGKYLLFTDQ----VPDNKHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F + ++K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEAYFTRKELGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L K + ++ + +L I GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLS------KAAMKRVHDQTIAILQLGIAKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G QN VYGKTG+PC C MI +I GR T C +CQK Sbjct: 225 NALGEDGTMQNYLQVYGKTGQPC-PRCASMIVKIKLGGRGTHLCPHCQK 272 >gi|153871079|ref|ZP_02000340.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] gi|152072453|gb|EDN69658.1| formamidopyrimidine-DNA glycosylase [Beggiatoa sp. PS] Length = 272 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + + + K LR+ P + +KI + RR KYL Sbjct: 1 MPELPEVETIRRGIATYTVGKKIKIAIVREKRLRWAVPDILTTILPNQKIQKIHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E I++HLGMSGS + + +H+H+ I T++ + + Y+DPR Sbjct: 61 LLECSNG-HILIHLGMSGSLWVLPSDTPLK----KHDHIDIVFTDD-----FCLRYHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + + +P L LG EP +F YL H K+ +KN +++ IV GI Sbjct: 111 RFGCM-LWTSEPVFDHPLLVKLGIEPLSATFTGKYLHHHAKKRRIVVKNYIMDSHIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P S+ L ++I++VL AI+ GG++LR++ Sbjct: 170 GNIYANEALFLAGIHPTCAAGSISLKR------YQHLAKKIKEVLHKAIEMGGTTLRNFS 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYF+ + VYG+ G C+ C I R+T+YC CQ Sbjct: 224 DSTGKPGYFKQSLCVYGRAGLACV-QCHNTIIVKKIGQRATYYCPMCQ 270 >gi|262368041|pdb|3JR4|A Chain A, Mutm Interrogating An Extrahelical G gi|262368044|pdb|3JR5|A Chain A, Mutm Lesion Recognition Control Complex With N174c Crosslinking Site Length = 273 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 P+LPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 G IYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R Y Sbjct: 171 FGCIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 225 VNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 273 >gi|312114960|ref|YP_004012556.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] gi|311220089|gb|ADP71457.1| formamidopyrimidine-DNA glycosylase [Rhodomicrobium vannielii ATCC 17100] Length = 294 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 127/297 (42%), Positives = 171/297 (57%), Gaps = 15/297 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR L M+ + + L+R +LRF F F RG++I ++RRAKY+ Sbjct: 1 MPELPEVEIIRRGLAPAMEGAAFSAVTLNRADLRFPFEPRFVERLRGQRIARLTRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---------KPIKNPQHNHVTISLTNNTNTKK 111 + E + L + +HLGM+G F IEH + + N H+HV +++N Sbjct: 61 VAEADSGLCLAMHLGMTGRFTIEHKADGAVTPGSFYYEHAANALHDHVVFAMSNGEV--- 117 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + YNDPRRFG+M L +P R LG EP ++ YL + K LK L Sbjct: 118 --IRYNDPRRFGYMTLFGAGEMAAHPLFRALGIEPLSDALTPDYLAARAAGKAQALKAFL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+I+AG+GNIYVCEAL+RA L P + +L K +L I+ VL DA+ A Sbjct: 176 LDQRIIAGLGNIYVCEALFRAGLPPDAEAGALGVGR-RGKAAAARLCAAIKAVLEDALLA 234 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GGSS+RDY H +G G+FQ F VYG+ GEPC + CG I R Q GRSTF+C +CQ Sbjct: 235 GGSSIRDYRHANGDGGHFQEKFDVYGRGGEPCHNKCGSFIERKAQQGRSTFFCPHCQ 291 >gi|306827856|ref|ZP_07461125.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] gi|304429965|gb|EFM33005.1| DNA-formamidopyrimidine glycosylase [Streptococcus pyogenes ATCC 10782] Length = 275 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + L + F+ G+ I V RR KYL Sbjct: 1 MPELPEVETVRRGLEALVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L G L ++ HL M G +++ + + +H HV L N + ++Y D R Sbjct: 61 LIDL-GQLVLVSHLRMEGKYLLFPDE----VPDNKHFHVFFELKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIAKSQLLAFFAKRKLGPEPKKETFKLKTFETALLSSQKPIKPHLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P + L + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETASSRLNKAE------IKRLHDETIRILALGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+TG+ C CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQDYLQVYGQTGKSC-PRCGQAIVKLKVGGRGTHICPKCQK 272 >gi|332139465|ref|YP_004425203.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693292|sp|B4S2C6|FPG_ALTMD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|327549487|gb|AEA96205.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Alteromonas macleodii str. 'Deep ecotype'] Length = 269 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 152/289 (52%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + T+T + + + +R+ P + G+K+ V RRAKYL Sbjct: 1 MPELPEVEVSRLGVSPHLIGNTITRVVVRERRMRWPIPQEVAK-VEGQKVTAVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE ++I+HLGMSG + S +H+HV I L+ + +NDPR Sbjct: 60 LIETAQG-TLILHLGMSGKLRVIDASTPVI----KHDHVDIVLSTGKCLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ + P L LGPEP + F+ L + +KN +++ IV G+ Sbjct: 110 RFGA--VLYQAPDTHIPMLDNLGPEPLTDDFDDTRLFTLSRNRKGPVKNFIMDNAIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R ++ L I++VL AI+ GG++L+D+ Sbjct: 168 GNIYANEALFLAGIDPRRAAGNISAARYKS------LTATIKQVLAKAIEQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF +VYG+ GEPC + CG+ I V R+TF+CT CQ+ Sbjct: 222 QTDGKPGYFAQHLNVYGRKGEPCEA-CGKAIESKVIGQRNTFFCTRCQR 269 >gi|116514451|ref|YP_813357.1| formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274817|sp|Q049F3|FPG_LACDB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116093766|gb|ABJ58919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 273 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++ T+ + + + P F +GK V R AK+L Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYDKVITGDPETFKRELKGKTFTVVDRYAKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G+L+++ HL M G + + +H H+ + T+ ++ + Y D R Sbjct: 61 LFRL-GDLTVVSHLRMEGKYHLTTWDAPVD----KHEHLQFAFTDGSSLR-----YADVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + LVET ++Q L+ LG E F Y K++ N+K+ L++Q +VAG+ Sbjct: 111 KFGRLQLVETGTEFQVTGLKNLGVEANSPEFRLDYFEKGLKKRSMNIKSLLMSQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW+++++P+ L KD + +L I + + +A GG+++ ++ Sbjct: 171 GNIYVDEVLWQSRINPLTPANELT------KDQVKQLHSAINETIEEATKYGGTTVHSFL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G G++Q VYGK G+PC CG+ +I GR T YC +CQK Sbjct: 225 NAEGGAGHYQEKLKVYGKEGQPC-PRCGEDFVKIKICGRGTTYCLHCQK 272 >gi|254515835|ref|ZP_05127895.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] gi|219675557|gb|EED31923.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR5-3] Length = 270 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + V + L LR+ P RG+ I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHSEGRQVVAVTLRDTRLRWPVPTSLPQMLRGQSILALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ +++VHLGMSGS + +P+ +H+H+ I L + + YNDPR Sbjct: 61 LFRMDRG-TLLVHLGMSGSLRV----LLEPLAPAKHDHIDIELDSGA-----LLRYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG T PL LGPEP + F+ L + +K +++ V G+ Sbjct: 111 RFGSFQWFATGEPLA--PLGKLGPEPLSDDFHGGRLFDLSRGRKIAIKPFIMDGATVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + L I++VL +AI+ GG++LRD+V Sbjct: 169 GNIYASEALYLAGIRPDRAASRVSRVR------YELLAGHIKQVLTNAIEQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC + CG +R V R++ YC CQ+ Sbjct: 223 GGDGKPGYFAQQLYVYGRSGEPCKA-CGTTLRDKVIGQRASVYCIACQR 270 >gi|257869279|ref|ZP_05648932.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] gi|257803443|gb|EEV32265.1| formamidopyrimidine-DNA glycosylase [Enterococcus gallinarum EG2] Length = 280 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 148/290 (51%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L ++ N T+ ++ + + F+A +G++ RR K+ Sbjct: 1 MPELPEVETVRRGLEKLILNKTIKEMEIRWPRIIESPEVPIFAAMLKGQQFQAFDRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L + +I HL M G + K +H HV T+ + + Y D Sbjct: 61 LIFKLT-DYDLISHLRMEGKYEFF----EKEGVPDKHTHVIFQFTDGSE-----LHYRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LVE Y + LGPEP F T K +K LL+QK+V G Sbjct: 111 RKFGRMTLVEKDQSSTYKGIMQLGPEPLPELFLLTDFTRDLKKSKKAIKPLLLDQKLVTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EALW AK+ P + +L + + L + I VL A++AGG+++R Y Sbjct: 171 LGNIYVDEALWEAKIHPEQSAATLNEAE------INLLHRAIIDVLARAVEAGGTTIRTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G G+FQ + VYG+TG PC+ CG I + A R T YC +CQ+ Sbjct: 225 LNALGEAGHFQVSLHVYGQTGNPCV-RCGTPIVKTKVAQRGTHYCPFCQQ 273 >gi|238028664|ref|YP_002912895.1| formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] gi|237877858|gb|ACR30191.1| Formamidopyrimidine-DNA glycosylase [Burkholderia glumae BGR1] Length = 275 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P + +AA ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVTGRRVRRVDVRTATLRWPVPDNLAAALEAREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + +P + +H+H+ + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPGG--EPPEARKHDHIDWVFDECV------LRFRDPR 111 Query: 121 RFGF--MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG E+ +++P L +LG EP F L + + ++K ALL IV Sbjct: 112 RFGAVLWHARESGDIHRHPLLTSLGVEPFSPLFTPELLFRRTRGRTVSVKQALLAGDIVV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L + ++ L DAI+ GGS+LRD Sbjct: 172 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YQRLAEAVRATLADAIERGGSTLRD 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 226 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGTPIRQIVQGQRSTYFCPNCQR 275 >gi|144898444|emb|CAM75308.1| formamidopyrimidine-DNA glycosylase [Magnetospirillum gryphiswaldense MSR-1] Length = 314 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 121/295 (41%), Positives = 163/295 (55%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L V + R +LR P F+A G+++ V RRAKYL Sbjct: 37 MPELPEVETVARGLAAVWPGHRFIRVEARRPDLRKPLPADFAARLTGRRVESVGRRAKYL 96 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ L+++ HLGMSG+ +I P H+HV + T V Y DPR Sbjct: 97 LVHLDDGLTLLGHLGMSGAMVISKGRNEPPGP---HDHVEFVSDDGTM-----VTYRDPR 148 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG MDL T +P L LGPEP F+ L K +++K ALL+Q +VAG+ Sbjct: 149 RFGLMDL--TLDPSTHPLLAHLGPEPLGPDFHEKALAQTLDGKGASIKAALLDQNVVAGL 206 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E+L+ + + P R SL + KL+ I+ VL AI AGGSSL+D+V Sbjct: 207 GNIYVSESLFLSGIDPTRAAGSLKPRE------INKLVPAIRAVLERAIAAGGSSLKDHV 260 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG------QMIRRIVQAGRSTFYCTYCQK 289 +G +GYFQ++F+VY + GE C C I+RIVQ+GRSTFYC Q+ Sbjct: 261 QPNGELGYFQHSFTVYDRAGEAC-PGCDCDIARTGGIQRIVQSGRSTFYCAKKQR 314 >gi|315499380|ref|YP_004088184.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] gi|315417392|gb|ADU14033.1| formamidopyrimidine-DNA glycosylase [Asticcacaulis excentricus CB 48] Length = 293 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 115/300 (38%), Positives = 163/300 (54%), Gaps = 19/300 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L+ +++ ++ + LHR NLR+ FP F+ G +I+ + RRAKYL Sbjct: 1 MPELPEVETVRRGLIPALEHAQLSGLRLHRPNLRYAFPERFAEQLEGAEILRLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSF----------IIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L L+ + HLGM+G F ++ +P+H HV + T T+ Sbjct: 61 LFHLDTQAVWVTHLGMTGRFQVTDMNGHSLRLDGDYYHAVRPDPRHLHVQVLATKEGVTR 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + DPRRFGFM L+ Y + LG EP ++ N L F + + LK+ Sbjct: 121 --LIDFYDPRRFGFMLLLRPDDLYTQRWYKGLGLEPLSDALNTDALHALFSVRRTPLKSL 178 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L++Q +++G+GNIYVCEALWRA LSP L L +++VL +A+ Sbjct: 179 LMDQTLISGLGNIYVCEALWRAGLSPDLPGNRLSHAKA------ALLTHAVREVLEEAVA 232 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGSS+ D+ G +GYFQ+ F VY + EPCL C I R +GRSTFYC CQK Sbjct: 233 AGGSSISDFTSASGELGYFQHRFRVYDREDEPCLRPGCAGTIARKTHSGRSTFYCPACQK 292 >gi|260892909|ref|YP_003239006.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] gi|260865050|gb|ACX52156.1| formamidopyrimidine-DNA glycosylase [Ammonifex degensii KC4] Length = 269 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR L + + + + R + P GK I VSRR K+ Sbjct: 1 MPELPEVETIRRQLAEKVIGARIKRVEVRRAAVMTNPIPGL--DLLSGKTITGVSRRGKW 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + LEG+L+++ HLGM+G + E + P H H+ I L R+ + D Sbjct: 59 LWLSLEGDLALLFHLGMTGQLVWEEEG-----ELPPHTHLLIELDRG------RLRFTDF 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L ++ Y LGPEP +F+ YL + + +K LL QK VAG Sbjct: 108 RRFGRVRLGKSEEIRDY-LEEKLGPEPLSPAFSVSYLKNALARSRRPIKALLLEQKAVAG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R +L + D + +L + I+ VL + I G+S+R+Y Sbjct: 167 LGNIYTDEALFLAGIDPRRPACTLTE------DEVKRLHEAIKGVLAEGIRHRGTSIRNY 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V +G+ G VYG+ G+PC CG I++I +GR T +C +CQ Sbjct: 221 VDAEGTPGEHSLFLRVYGREGQPC-PRCGTPIKKIKLSGRGTHFCPHCQ 268 >gi|323126769|gb|ADX24066.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 275 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 VFDF-GQTVLVSHLRMEGKYLLFPDEVPEQ----KHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERPSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC +CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PSCGQAISKLKVGGRGTHICPKCQK 272 >gi|39996100|ref|NP_952051.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|81702906|sp|Q74EG5|FPG_GEOSL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|39982865|gb|AAR34324.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens PCA] gi|298505115|gb|ADI83838.1| formamidopyrimidine-DNA glycosylase [Geobacter sulfurreducens KN400] Length = 271 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + VT + LR P G+ I V RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHVTGRRVTAVTARAAKLRLPIPPELGERLTGRVIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+ + I+HLGM+G+ + +++H+ + L + + + DPR Sbjct: 61 LLRC-GDGTAIIHLGMTGTLRVAPAGSP----PGKYDHLDLVLDDGRTLR-----FRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + L S +P L LGPEP FN YL + K+N+ +K L++ +IV G+ Sbjct: 111 KFGLV-LWTGSDPLAHPLLAQLGPEPFPPLFNGSYLFSRSRKRNAAIKLLLMDNRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA++ P R SL + + L + VL DAI G ++L +++ Sbjct: 170 GNIYANEALFRARIHPERAAGSLSEED------CATLATAVGDVLRDAIAEGDTTLHEFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GYF+ +VYG+TG+PC + CG I RI RST++C CQK Sbjct: 224 ATEVPSGYFRINPAVYGQTGKPC-TVCGTPIARIRLGNRSTWFCPVCQK 271 >gi|83595128|ref|YP_428880.1| formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] gi|123525348|sp|Q2RMQ2|FPG_RHORT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83578042|gb|ABC24593.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rhodospirillum rubrum ATCC 11170] Length = 281 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 113/295 (38%), Positives = 159/295 (53%), Gaps = 20/295 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + ++ + R LR P GK + + RRAKYL Sbjct: 1 MPELPEVETVRLGLTPALVGERLSRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++HLGMSGS + A + H+H+ RV + DPR Sbjct: 61 LLRMIDGPVALIHLGMSGSMTV--GPLAGHAEPGPHDHILFETEAG-----LRVTFRDPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L E +P L LGPEP +F+A L + + + + +K ALL+Q +VAG+ Sbjct: 114 RFGLITLAEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLDQGVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA +SP+R S+ L+ I+ VL +AI AGGSSLRD+ Sbjct: 174 GNIYVSEALFRAGISPLRPAASVTGAWA------EALVAAIRAVLGEAIAAGGSSLRDHR 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCG------QMIRRIVQAGRSTFYCTYCQK 289 DG++GYFQ+ F+VY + G+PC C I R+VQ+GRSTF+C Q+ Sbjct: 228 QTDGALGYFQHRFAVYDRVGQPC-PGCDCDVARTGGIERMVQSGRSTFFCGRRQR 281 >gi|88859719|ref|ZP_01134359.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] gi|88818736|gb|EAR28551.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas tunicata D2] Length = 271 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 141/288 (48%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + M T+ + +H LR+ P G+ I + RRAKYL Sbjct: 1 MPELPEVEVSRMGITPHMLLKTIRTVRVHHWQLRWPVPKEM-EQLAGQTITAIERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++I+HLGMSG+ I + A +H+H+ I L + + NDPR Sbjct: 60 QLVTPIG-TVILHLGMSGNLRIVDKAVALK----KHDHIEIELESG-----LVLRLNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LGPEP ++FN L Q K + +K +++ K V G+ Sbjct: 110 RFGACLWQAPGE--THSVFAKLGPEPLTDAFNPEQLFEQAKNKKTAIKQFIMDNKFVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++AK+ P L + L+ I++ L AI GG++L+D+ Sbjct: 168 GNIYANEALFKAKIHPQTPAGQLQLADFV------ALVPIIKQTLAQAITQGGTTLKDFA 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ G+PC+ C ++ I RST +C CQ Sbjct: 222 QTDGKPGYFAQELQVYGRKGKPCV-QCDTVLLEIRLGQRSTVFCPSCQ 268 >gi|89894087|ref|YP_517574.1| hypothetical protein DSY1341 [Desulfitobacterium hafniense Y51] gi|219668498|ref|YP_002458933.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|122483280|sp|Q24XW2|FPG_DESHY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789434|sp|B8FU83|FPG_DESHD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89333535|dbj|BAE83130.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538758|gb|ACL20497.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 273 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 112/289 (38%), Positives = 153/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE IRR+L + + +I + + F+ A RG K + RR KY Sbjct: 1 MPELPEVETIRRSLSQHILERRIEEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL LE S I H+ M+G + A+ + +H HV + L++ + + D Sbjct: 61 LLFTLEEGWSFIAHMRMTGRMVYH----AQSQEPEKHTHVVLKLSSG------EIHFTDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LV T + Q P L LGPEP + F+A L + + +K ALL+Q +VAG Sbjct: 111 RKFGRLQLVRTEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQTLVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+RA ++P R SL K+ + KL I +VL + I A G+S RDY Sbjct: 171 IGNIYADEALFRAGIAPERCANSLT------KEEIEKLYPAICQVLEEGIAANGTSFRDY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G G FQ VYG+ GEPC CG + RI AGRST +C CQ Sbjct: 225 QDANGERGDFQKELKVYGRGGEPCKE-CGHTLVRIRLAGRSTVFCPCCQ 272 >gi|53724080|ref|YP_104600.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121599146|ref|YP_991435.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124384583|ref|YP_001027489.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10229] gi|167001041|ref|ZP_02266842.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|238561326|ref|ZP_00442180.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|254175289|ref|ZP_04881950.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|254201689|ref|ZP_04908053.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|254207021|ref|ZP_04913372.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|254357500|ref|ZP_04973774.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|262193291|ref|YP_001082455.2| formamidopyrimidine-DNA glycosylase [Burkholderia mallei NCTC 10247] gi|81684913|sp|Q62FC7|FPG_BURMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215615|sp|A2S6C0|FPG_BURM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215616|sp|A1UZN2|FPG_BURMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|52427503|gb|AAU48096.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 23344] gi|121227956|gb|ABM50474.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei SAVP1] gi|124292603|gb|ABN01872.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10229] gi|147747583|gb|EDK54659.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei FMH] gi|147752563|gb|EDK59629.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei JHU] gi|148026564|gb|EDK84649.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei 2002721280] gi|160696334|gb|EDP86304.1| formamidopyrimidine-DNA glycosylase [Burkholderia mallei ATCC 10399] gi|238524786|gb|EEP88217.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei GB8 horse 4] gi|243063112|gb|EES45298.1| DNA-formamidopyrimidine glycosylase [Burkholderia mallei PRL-20] gi|261835059|gb|ABO05590.2| DNA-formamidopyrimidine glycosylase [Burkholderia mallei NCTC 10247] Length = 272 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 149/291 (51%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E++ IVHLGM+G+ + P +H+HV + + + DPR Sbjct: 61 LFEVDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPR 112 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + + +P L +LG EP F+A L + + ++K ALL IV Sbjct: 113 RFGAVLWHPRDAGDVHAHPLLASLGVEP----FSAALLFGRTRGRTVSVKQALLAGDIVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + +L ++ L DAI+ GGS+LRD Sbjct: 169 GVGNIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRD 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 223 FVGSNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 272 >gi|145590096|ref|YP_001156693.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048502|gb|ABP35129.1| DNA-(apurinic or apyrimidinic site) lyase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 278 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 149/295 (50%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ + + ++ T++ I + LR+ P G+KI ++RR KYL Sbjct: 1 MPELPEVEVTKLGIAPHLQGRTISAIKVIDGRLRWPVPKSLPQILPGQKIQSIARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE +++HLGM+G+ + +S + H+ VT + + +DPR Sbjct: 61 LLELEKGC-LLIHLGMTGTLRVLPSSEPLKL----HDRVTFEF------GRLSLRLHDPR 109 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIY----LTHQFHKKNSNLKNALLNQ 174 +FG + P L LG EP ++F L K++ +K LL Sbjct: 110 KFGAVLWHPKIKGPVESNPLLLKLGVEPFSSAFEGELGTGILYQASRKRSVAVKQFLLAG 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V G+GNIY E+L+ A + P + L + + +L ++ +L AIDAGGS Sbjct: 170 QAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQCS------RLASAVRSILKKAIDAGGS 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +L+D+V+ DG G+F VY + G PC C I++IVQ RST++C CQK Sbjct: 224 TLKDFVNSDGDPGHFTVQSKVYDRKGLPC-KVCKTPIQQIVQGQRSTYFCPVCQK 277 >gi|119897050|ref|YP_932263.1| formamidopyrimidine-DNA glycosylase [Azoarcus sp. BH72] gi|119669463|emb|CAL93376.1| MutM protein [Azoarcus sp. BH72] Length = 272 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ ++ + + LR P + + G+ + VSRRAKYL Sbjct: 1 MPELPEVETTCRGVRPHVEGRRLSAVVVRNPRLRVPVPDNLAQLAAGQVLASVSRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++VHLGMSGS + +H+H+ + + + DPR Sbjct: 61 LLDFDRGG-LVVHLGMSGSLRVVAAGEPA----GKHDHLDLVFGETS------LRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L LGPEP D++F+A Y + +K+ L++ + V G+ Sbjct: 110 RFGMVLWQEGGAV-AHPLLAGLGPEPLDDAFDARYWVAATRGLRAPIKHVLMDGRRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+++ P+ ++ +L+ +++ L +AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRSRIHPLEPAGAIGPQRA------ARLVLAVKETLTEAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + Y + GE C CG +IRR V R+TF+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFAYDREGEAC-RVCGSVIRRFVSGQRATFFCPRCQR 270 >gi|319788474|ref|YP_004147949.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] gi|317466986|gb|ADV28718.1| formamidopyrimidine-DNA glycosylase [Pseudoxanthomonas suwonensis 11-1] Length = 271 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ VT + L R +LR+ P G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGLAPHVEGRRVTTVTLRRPDLRWPIPREVVEELPGRRIAAVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + S ++HLGMSG + H+HV ISL + + + DPR Sbjct: 61 LLDTDRGDSALLHLGMSGMLRVLPPETPVNT----HDHVDISLDSGRVLR-----FTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ L+ LGPEP F+ +L + +++ +K L++Q+IV G+ Sbjct: 112 RFGCLLWQPAGTVHE--LLQDLGPEPLSGDFDGDWLYARSRGRSAPVKAFLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP+R + + L ++++L AI GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISPLRAAGKVSRAR------YIALADAVKEILGYAITRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG+ GYF+ +VYG+ G PC CG +R R++ +C CQ+ Sbjct: 224 NPDGAPGYFEQELAVYGRGGLPC-PACGTPLREASIGQRTSAWCPRCQR 271 >gi|300113180|ref|YP_003759755.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] gi|299539117|gb|ADJ27434.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus watsonii C-113] Length = 271 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + + + + LR+ P + G+ + V RR KYL Sbjct: 1 MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLFLTQNLIGQSFLAVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +II HLGMSGS + + +H+H+ I L + + +NDPR Sbjct: 61 LLNCTQG-TIIFHLGMSGSLRLVTNNTP----PAKHDHLDILLNSGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + +P L LGPEP ++ F+ YL + + +K ++N +IV GI Sbjct: 111 RFGSVSWTQANPVH-HPLLEILGPEPLESLFDGHYLFKHSRHRRAPVKVFIMNHRIVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L I+ VL +AI AGG++LR+++ Sbjct: 170 GNIYANEALFLAGIHPRRSAGRIGLAR------YQRLADTIKTVLDNAIQAGGTTLRNFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +Y + PC CG IR R+++YC CQ Sbjct: 224 TSDGKPGYFVHQLQIYNRNAHPC-PVCGTPIRLERIGQRASYYCPRCQ 270 >gi|262377505|ref|ZP_06070727.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] gi|262307561|gb|EEY88702.1| formamidopyrimidine-DNA glycosylase [Acinetobacter lwoffii SH145] Length = 286 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 160/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V + + + +LR+ P + G+K++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLE-QRVKRVEVRQSSLRWPIPENIEK-LVGQKLLKLTRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + +++ HLGMSGSF + C + +H+H+ I + + Y+DPR Sbjct: 59 LAEFEHD-TMLWHLGMSGSFRL----CESNEELRKHDHLIIQFED------IELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + Q + TLGPEP +FNA YL + KN K A+++ IV G+ Sbjct: 108 RFGCILWLD--AQSQSKLIDTLGPEPLSENFNAKYLFEKLKNKNVGTKVAIMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNLGIHPAQPASTLSLVQ------IEKLVLEIKRILKQAIDLGGSTLRDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|251781944|ref|YP_002996246.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390573|dbj|BAH81032.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 275 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPKMVKSDLRIFLQTLPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 VFDF-GQTVLVSHLRMEGKYLLFPDEVPEQ----KHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLSDFFAQRKLGPEPKKETFKLKPFEVALQSSKKLIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|317405473|gb|EFV85782.1| DNA glycosylase [Achromobacter xylosoxidans C54] Length = 281 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 145/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ +T + +H +R+ P A G + + RR KYL Sbjct: 7 MPELPEVETTRRGIDAVITGRPLTRLVVHESRMRWPIPAELPALVGGHTVRECGRRGKYL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + IVHLGMSGS S A +H+HV + +DPR Sbjct: 67 LLRFDHGTQ-IVHLGMSGSLR----SVAPGEFLRKHDHVEWIFDQAV------LRLHDPR 115 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L H F + +K LL V Sbjct: 116 RFGAVLWHPDADGPVENHPLLAKLGIEPFDPRFDGAWLHHHFKNHGAAIKQVLLAGMAVV 175 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L + +L ++ L DA+ +GGS+LRD Sbjct: 176 GVGNIYASESLFRARINPKTPANKLSRAR------CDRLADMVRATLADALTSGGSTLRD 229 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC CG I+RIVQ R+T+YC CQK Sbjct: 230 YVGATGEPGAYFEIHAAVYERAGQPC-RVCGTPIKRIVQGQRATYYCPKCQK 280 >gi|148265694|ref|YP_001232400.1| formamidopyrimidine-DNA glycosylase [Geobacter uraniireducens Rf4] gi|189044594|sp|A5G7Q9|FPG_GEOUR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146399194|gb|ABQ27827.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens Rf4] Length = 271 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR + G+ I V RR KYL Sbjct: 1 MPELPEVETTRRGIAPYLVGKRICRVTVRTAKLRLPLQPDLDSILSGRIISAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++I+HLGM+G+ + +H+H+ + L + + DPR Sbjct: 61 LVRFTAG-TLILHLGMTGNLRLVQADTP----PGRHDHLDLVLNSG-----LCLRLTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF + ++ L GPEP F+ YL + + +K +++ +++AG+ Sbjct: 111 RFSTIVWTHDDPL-RHTLLAKHGPEPLTGDFSGDYLYTKSRGRRITVKQFIMDSRVLAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CEAL+RA + P +L +L I++VL DAI +GGS+L D++ Sbjct: 170 GNIYACEALFRAGIHPETPAGALSTT------HCLRLADTIKEVLTDAIASGGSTLGDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G GYF +FSVYG+ PC CG IRR Q GRST++C CQ Sbjct: 224 VSEGKPGYFPMSFSVYGRNDAPC-PGCGAPIRRSRQGGRSTYFCDRCQ 270 >gi|328545945|ref|YP_004306054.1| formamidopyrimidine-DNA glycosylase [polymorphum gilvum SL003B-26A1] gi|326415685|gb|ADZ72748.1| Formamidopyrimidine-DNA glycosylase [Polymorphum gilvum SL003B-26A1] Length = 280 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 126/281 (44%), Positives = 169/281 (60%), Gaps = 10/281 (3%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ + + +R +LRF FP F A G+ + +SRRAKYLL +L+ +++HLGMS Sbjct: 1 MEGARIRAVDRNRPDLRFPFPEDFEARLTGRNVTALSRRAKYLLADLDDGTVLVMHLGMS 60 Query: 78 GSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF IE S A K+P+H+HV L + T R+ YNDPRRFGFM L E Sbjct: 61 GSFRIEAGSGADMPGDFVHARSKDPRHDHVVFHLERSEGTA-VRITYNDPRRFGFMLLAE 119 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + +P +G EP N+ + L F K + LK ALL+Q ++AG+GNIYVCEAL Sbjct: 120 RAGLADHPLFARMGLEPLGNALDGAVLAQLFAGKRAPLKAALLDQGLIAGLGNIYVCEAL 179 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WRA LSP R+ S+ + KL I+ VL +AI+AGGSSLRD+ DGS+GYF Sbjct: 180 WRAGLSPTREAGSIAGGSPRGGARCEKLADAIRNVLEEAIEAGGSSLRDHARTDGSLGYF 239 Query: 250 QNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ F+VYG+ GEPC C + RIVQ+ RSTF+C CQ+ Sbjct: 240 QHTFAVYGREGEPCRTPGCPGTVERIVQSNRSTFFCRRCQR 280 >gi|310641224|ref|YP_003945982.1| formamidopyrimidine-DNA glycosylase (fapy-DNA glycosylase) [Paenibacillus polymyxa SC2] gi|309246174|gb|ADO55741.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa SC2] Length = 276 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++ + + + ++ + R D F+ G +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIDAFAMELAGHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ L ++ HL M G + + ++ +H HV + T + Y D Sbjct: 61 FLRILLD-GLVLVSHLRMEGRYGLY----SQDDPVEKHTHVIFHFKDGTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQSYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV E+L++A + P + +SL + L + I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSLTDSQFRV------LHEAIVSTLGASIQVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 225 FVNGQGKTGDFQHQLQIYGRNAKPCM-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc fallax KCTC 3537] Length = 275 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L ++ + +I + + F T + + RR KYL Sbjct: 1 MPELPEVETVRSGLEKLIVGGEIANIRVPYPKVIMGDAPAFIQGTLASQFTAIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +I+ HL M G + +E P+ P H H I + YND R Sbjct: 61 FLRLSNQRTIVSHLRMEGQYSVE------PLDAPLHKHTEIVFELADG---RALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L ET L+ P L LGPEP + Y+ F K +K+ LL+Q +AG Sbjct: 112 RFGRMTLAETGLEQIAVPTLAKLGPEPITTDLHLEYMIQIFAKSKKPVKSFLLDQTKIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPETPANELDPSQ------LAILRDSIISEIALAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN VYG++G PCL CG + +I R T +C CQ Sbjct: 226 SNVFGEVGQFQNQLEVYGRSGLPCL-RCGTPLVKIRVGQRGTTFCPKCQ 273 >gi|255658137|ref|ZP_05403546.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] gi|260849444|gb|EEX69451.1| DNA-formamidopyrimidine glycosylase [Mitsuokella multacida DSM 20544] Length = 274 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEIIR+ L + T+ L + L++ P F + GK++ + RR KY Sbjct: 1 MPELPEVEIIRQYLDEQLPGRTIACADILLTRQLKYPEPEAFQSLVAGKRMKGMRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL++L+ +I+ HL M+GS + + + + + + L +++ D Sbjct: 61 LLLDLQDGSTIVFHLRMTGSLVYDPSGNQRD----AYARMVFHLAGGG-----ALVFADV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + L++LGPEP +F YL + +K+ LL+Q+ +AG Sbjct: 112 RTFGCVYGFAAGEEIAVSGLQSLGPEPLSEAFTPAYLAQAIRGRKQPIKSFLLDQRRIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P R+ SL Q KL IQ VL D + GG++ R+Y Sbjct: 172 LGNIYADESLFLAGIHPRREAGSLTQAE------CKKLAAAIQHVLRDGLADGGTTFRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G G Q VY + G+PC CG+ I +I GR T +C YCQ Sbjct: 226 RNGEGGYGRHQEHLCVYHRAGKPC-PTCGRPIEKITVGGRGTHFCPYCQ 273 >gi|257094300|ref|YP_003167941.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046824|gb|ACV36012.1| formamidopyrimidine-DNA glycosylase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 275 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 149/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L+ +++ + + LR + P ++ G ++ + RR KYL Sbjct: 1 MPELPEVEVSRQGLLPLLRGQRILGAVVRTPRLRHEIPPDLASRLTGLRLDGILRRGKYL 60 Query: 61 LIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L++ E II+HLGMSGS + +H+HV + + + Sbjct: 61 LLDCESSARGGWIILHLGMSGSLRLVPPETP----PRKHDHVDLVF------GQSVLRLR 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + +P L LG EP F+ +L ++ +K L++ + Sbjct: 111 DPRRFGAVLWHAGGDVESHPLLAALGVEPLSEGFSGDWLYAATRRRRVAIKPLLMDSHFL 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+RA +SP+R + +L+ I+ L AI AGGSS+R Sbjct: 171 VGVGNIYAAESLFRAGISPLRTADRISLAR------YRRLVTAIRATLEAAIAAGGSSVR 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DYVH DG G FQ + +VY + G+PC C +R I Q+GRSTFYC CQ+ Sbjct: 225 DYVHSDGGAGCFQLSCAVYDRAGQPC-PACAGEVRTIRQSGRSTFYCPRCQR 275 >gi|78212042|ref|YP_380821.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9605] gi|78196501|gb|ABB34266.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9605] Length = 278 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 137/293 (46%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRPRAIASPGGPDEFVAGLCGTTVGQWHRRGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE VHL M+G F +P + +H V + N+K+ + + Sbjct: 61 YLMTALEPESGVWGVHLRMTGQFQWH----EQPSEPCKHTRVRL-----WNSKEEELRFV 111 Query: 118 DPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSADFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG GNIY E+L+ + ++P L L +L + VL +I AGG++ Sbjct: 172 LVAGAGNIYADESLFASGIAPFTPAGQLNLQQ------LERLRDALVNVLTISIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + GEPC NCG I+R +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGEPC-RNCGTTIQREKLSGRSTHWCPTCQ 277 >gi|167464952|ref|ZP_02330041.1| formamidopyrimidine-DNA glycosylase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382877|ref|ZP_08056712.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153146|gb|EFX45601.1| formamidopyrimidine-DNA glycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 286 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L ++ T+ + + + F+ G+ I + RR K Sbjct: 1 MPELPEVETVKRTLNELVVGKTIEQVEVRLSRIIQKPLNIEEFALLLEGQTIERIDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + ++ HL M G + + ++ H HV T+ T+ + Y D Sbjct: 61 FLKFIFT-DYVLVSHLRMEGRYGVYLSNDPVEN----HTHVLFHFTDGTDLR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + PPL LG EP D +F H K + +K LLNQ+ + Sbjct: 111 VRQFGTMHLFPKGQEELDPPLNKLGLEPLDETFTFERFYQTIHHKTTRIKPLLLNQEYIV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EAL+ A + P +T L + L KL + I L ++D GGSS++ Sbjct: 171 GVGNIYVDEALYTAGIHPETETHLLTKKE------LRKLHEAIVHTLQSSVDVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+ +YG+T E C + CG +I ++V GR T C CQ Sbjct: 225 YVNGQGEMGMFQHQLKIYGRTSELC-TQCGGVIVKMVVGGRGTHICPTCQ 273 >gi|226951692|ref|ZP_03822156.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] gi|226837557|gb|EEH69940.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. ATCC 27244] Length = 273 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLT-QRVQSVKVLNASLRWPIPDNLEK-LVGQRLTALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + + A +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRLCEPNDAL----RKHDHLIIDFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q + TLGPEP FNA YL + KKN +K AL++ IV G+ Sbjct: 108 RFGCILWLDPDN--QSKLIDTLGPEPLSEDFNANYLREKLSKKNVGIKIALMDNHIVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + + KL+ E++++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNIGVHPAQPASTLTKVQ------VEKLVIEVKRILKHAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|113866406|ref|YP_724895.1| formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] gi|123134465|sp|Q0KEP4|FPG_RALEH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113525182|emb|CAJ91527.1| Formamidopyrimidine-DNA glycosylase [Ralstonia eutropha H16] Length = 292 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 152/302 (50%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPQLEMRLAQRVVRRIERRGKYL 60 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN------NTN 108 L+E E ++VHLGM+G+ + + + H+H+ + L T Sbjct: 61 LLECVSEAAGEPAGWLLVHLGMTGTLRVLPEAPS----PGAHDHLDLVLAPGPGAALGTK 116 Query: 109 TKKYRVIYNDPRRFGFMDL--VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + DPRRFG + + + +P LRTLG EP D +F+ +L +++ Sbjct: 117 PGTIVLRFRDPRRFGAILWSTLPEAELPSHPLLRTLGIEPFDPAFDGAWLHRHTRGRSAA 176 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL IV G+GNIY E+L+RA + P L + +L Q +++ L Sbjct: 177 IKTVLLAGGIVVGVGNIYASESLFRAGIRPTTPAGRLSRAR------CDRLAQAVRETLA 230 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI+ GGS+LRD+V DG+ GYFQ VY + G+PC C +R+IVQ RSTFYC Sbjct: 231 QAIERGGSTLRDFVGSDGASGYFQLDCLVYDRAGQPC-RVCATPVRQIVQGQRSTFYCPN 289 Query: 287 CQ 288 CQ Sbjct: 290 CQ 291 >gi|149195827|ref|ZP_01872884.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] gi|149141289|gb|EDM29685.1| formamidopyrimidine-DNA glycosylase [Lentisphaera araneosa HTCC2155] Length = 276 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 162/292 (55%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L ++ T+ + LR + F+ GKKI + RR+KY Sbjct: 1 MPELPEVETVKNALAPYIEGETIKSFHFYTPRLRQELDAALFNKTFSGKKITRLKRRSKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL E + I+ HLGM+GS+ I + + +H H++I L N+ + Y DP Sbjct: 61 LLFEFDDQKWILSHLGMTGSWRICKLTEERK----KHEHISIRLDNDQELR-----YCDP 111 Query: 120 RRFGFMDLVETSLKYQYPP--LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG ++ L P L LGPEP D S++ YL K +KN +++ + V Sbjct: 112 RRFGEFRVITAPLDSTTDPQALSHLGPEPFDESYSQEYLWDLSRSKTKPIKNFIMDPRTV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+R +SP+RKT+ L + + LI Q VL AIDAGG+++ Sbjct: 172 CGIGNIYASETLFRCGISPLRKTQKLRKKD------CLNLINHSQSVLQSAIDAGGTTII 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ DGS G+F +VYG+ GE C+ C ++I+RIVQAGRS+FYC CQK Sbjct: 226 DFQAPDGSEGWFHQQLNVYGREGEDCV-QCDKIIKRIVQAGRSSFYCPGCQK 276 >gi|294651377|ref|ZP_06728695.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] gi|292822732|gb|EFF81617.1| DNA-formamidopyrimidine glycosylase [Acinetobacter haemolyticus ATCC 19194] Length = 281 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ ++ V + + +LR+ P + G+++ + RR+KY+ Sbjct: 9 MPELPEVETTKTSLLPLLT-QRVQSVKVLNASLRWPIPDNLEK-LVGQRLTALKRRSKYI 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + + A +H+H+ I + ++ Y+DPR Sbjct: 67 LAEFEQDQ-MLWHLGMSGSFRLCEPNDAL----RKHDHLIIDFEDQ------QLRYHDPR 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q + TLGPEP FNA YL + KKN +K AL++ +V G+ Sbjct: 116 RFGCILWLD--QVNQSKLIDTLGPEPLSEDFNARYLLEKLQKKNVGIKIALMDNHVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + + KL+ E++++L AID GGS+LRDY Sbjct: 174 GNIYATESLFNIGVHPAQPASTLTKAQ------VEKLVIEVKRILKHAIDLGGSTLRDYS 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 228 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 274 >gi|83595877|gb|ABC25239.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium Ant4D3] Length = 270 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +M ++ + + + LR+ P +A GK + V RR KYL Sbjct: 1 MPELPEVETTRAGIMPHIQGQILQHVVVRDTRLRWPVPIDLAAKVEGKCLRQVVRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +II HLGM+GS I H+HV + + T + Y DPR Sbjct: 61 LFEFDHG-AIIGHLGMTGSMRIVVHKEPPAY----HDHVDLVFSEVT------LRYRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + + ++P L +LGPEP + F+ ++L K +K+ +++ K V G+ Sbjct: 110 RFGCV-LWQDNPVMEHPLLASLGPEPLSDEFDMVHLLQVCKGKKQAIKSVIMDAKQVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + L KL++ ++VL AI+ GG++LRD+V Sbjct: 169 GNIYANEALFMAGIHPHRQAGRISAAR------LGKLVESCKQVLCAAIEQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYF+ VYG+ G+ C+ NC Q + RST YC +CQ+ Sbjct: 223 DSEGKPGYFKQQLQVYGRAGQACV-NCDQALTESRIGQRSTVYCKHCQR 270 >gi|329903035|ref|ZP_08273347.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gi|327548513|gb|EGF33179.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 316 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 152/291 (52%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + TV D+ L R LR+ FP + G+ + RR KYL Sbjct: 44 MPELPEVEVTRMGIAPHLDGRTVADVVLRRSGLRWPFPPDLAVTLAGRTVRSTGRRGKYL 103 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + ++++HLGMSG I S + +H+H + + + + DPR Sbjct: 104 LIGFDHG-TLLIHLGMSGHLRILPLSTP----SEKHDHFDLVVGDQ------LMRLTDPR 152 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + E + LR LG EP + A L HQ +++ +K LL +V Sbjct: 153 RFGAVLWHAQEDGPLEHHVLLRGLGIEPLGATLLAQTLFHQTRGRSAAIKQVLLAGDVVV 212 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P + +L EIQ L AI GGS+LRD Sbjct: 213 GVGNIYASESLFRARINPKTPAGRIALAR------YERLASEIQDTLSAAIAQGGSTLRD 266 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V +G GYFQ ++ VY +TGEPC CG +R+I Q RSTFYC +CQK Sbjct: 267 FVGANGQSGYFQQSYFVYDRTGEPC-RVCGLAVRQIKQGQRSTFYCVHCQK 316 >gi|119503521|ref|ZP_01625604.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] gi|119460583|gb|EAW41675.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2080] Length = 269 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + + LR+ A G++I+ RRAKYL Sbjct: 1 MPELPEVETTRRGIDPHAVDRCIERVVIRNAQLRWPIEDGLPALAAGQRILRTRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+LE + +++VHLGMSGS I S H+HV I L + + YNDPR Sbjct: 61 LIDLEHH-TLMVHLGMSGSLRIMPASTPPMF----HDHVDIVLNDGNCLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + + LR LGPEP N F+ ++L + + +K L++ +IV G+ Sbjct: 111 RFGSLHILTSD---DHALLRHLGPEPLSNDFDGVWLYEAARGRKAAVKQFLMDGRIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + +L + ++ +L AI+ GG++LRD+V Sbjct: 168 GNIYANEALFMAGIRPTRSAGKIS------LIRYQRLAEAVKVLLAAAIERGGTTLRDFV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG+ + C C ++ I RS+ +C CQ+ Sbjct: 222 GGDGKPGYFAQELRVYGRGNQLC-RACSGRLQEIRLGNRSSVFCPACQR 269 >gi|119713349|gb|ABL97413.1| formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB80_02D08] Length = 270 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 164/288 (56%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +++ + ++ ++ +NLR+ F + T G+ + + RRAKYL Sbjct: 1 MPELPEVETTLRAIEKF-QSLKIHEVKIYNRNLRWKISKDFESLTIGQTVESIKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +II+HLGMSGS I + I +H+HV + + R+IYNDPR Sbjct: 60 IFHLSNGQNIILHLGMSGSLRIAKNNENFFI---KHDHVELIFDDE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + TS ++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHV--TSNYKKHKLIKNLGPEPLSKNFNAESFYAACKTSKTNIKSFLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP+R + L N KL+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLSSISPLRDAKDLDLNE------CKKLVASGKKILKKAINVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ E C + C + I +IV R+TF+C CQ Sbjct: 223 SADGSPGYFKFELNVYGRENESCNNCC-ENISKIVINQRATFFCKSCQ 269 >gi|332304442|ref|YP_004432293.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171771|gb|AEE21025.1| formamidopyrimidine-DNA glycosylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 270 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 144/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + K LR+ P G ++ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQQIKRVVVRHKQLRWLVPDE-VHLAEGLRVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + SII+HLGMSG I ++ +H+H+ I L N + +ND R Sbjct: 60 FIDTDAG-SIILHLGMSGKLRIVNSDTPVI----KHDHLDIVLANGVCLR-----FNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + S + + LGPEP F+ L K+ +KN +++ K+V G+ Sbjct: 110 RFGACLWQDVSEP-EIGMIAALGPEPLTADFDGQRLYDLSRTKSVAVKNFIMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + K L I+ VL AI+ GG++L+D+ Sbjct: 169 GNIYANEALFIAGIDPRKAAKKVS------KKTYLALGDIIKDVLAKAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF VYG+ GE C C I+ + R+TF+C CQ Sbjct: 223 QADGNPGYFAQHLRVYGRKGEAC-EVCASEIQSVTLGQRNTFFCEQCQ 269 >gi|195978526|ref|YP_002123770.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975231|gb|ACG62757.1| formamidopyrimidine-DNA glycosylase MutM [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 296 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 25 MPELPEVETVRRGLERLVVGKQIAAVTVRVPKMVKTDLEHFVMTILGQQVQGVDRRGKYL 84 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ + + + +H HV +++T+ + ++Y D R Sbjct: 85 LFDF-GQLVMISHLRMEGKYLLFSDT----VPDQKHFHVFLTMTDGST-----LVYQDVR 134 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S + R LGPEP +F ++K LL+Q +VAG+ Sbjct: 135 KFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVAGL 194 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 195 GNIYVDEVLWAAKVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 248 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 249 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGAAIVKLKVGGRGTHVCPRCQR 296 >gi|262369235|ref|ZP_06062563.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] gi|262315303|gb|EEY96342.1| formamidopyrimidine-DNA glycosylase [Acinetobacter johnsonii SH046] Length = 284 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ + V I + + +LR+ P S G+++I + RR+KY+ Sbjct: 1 MPELPEVETTKASLAPLL-DQQVLSIEVRQSSLRWPIPADLSK-LVGQRLIQLKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E + +++ HLGMSGSF I +H+H+ I + + Y+DPR Sbjct: 59 LAVFEQD-TMLWHLGMSGSFRICEVGETL----RKHDHLIIRFED------VELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ Q + TLGPEP FNA YL+ + K +K A+++ +V G+ Sbjct: 108 RFGCILWLD--EYSQTKLIDTLGPEPLSADFNAEYLSQKLKNKQVGIKVAIMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + SL D + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNLGIHPAQVASSLTH------DQIEKLVVEIKRILQQAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + I R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENIKLGQRASVFCPECQ 266 >gi|325273726|ref|ZP_08139926.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] gi|324101146|gb|EGB98792.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas sp. TJI-51] Length = 270 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVTVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEQGLPAA----KHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + L ++ L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSQDPL--RHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYASEALFAAGIDPRRAAGGISRAR------YLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQTLFVYGRAGQPC-KVCGTELREVKLGQRASVFCPRCQR 270 >gi|167629831|ref|YP_001680330.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] gi|238687886|sp|B0TER7|FPG_HELMI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|167592571|gb|ABZ84319.1| formamidopyrimidine-dna glycosylase [Heliobacterium modesticaldum Ice1] Length = 277 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 153/290 (52%), Gaps = 14/290 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + +T+ + L + F P F+ A RG++II++ RR KY Sbjct: 1 MPELPEVETVRRSLAGRITGLTIEKVELRLPKIAFALPGTLFTDALRGRRIIELGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+G+ ++++HL M+G I + H H L + + + Y D Sbjct: 61 LLLHLDGDETLVIHLRMTGRL-IHLRPEEREEPEAAHTHAVFFLDDGS-----LLRYTDV 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + L+ + P LGPEP F+ + + K+ + LK LL+Q +AG Sbjct: 115 RQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQSFLAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA+L P R SL +L I+ VL + IDA G+S RDY Sbjct: 175 LGNIYADEALARARLHPDRTADSLDDEES------RRLYDCIRTVLQEGIDAKGTSFRDY 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G FQ VYG+ G PC CG I R +AGRST +C CQK Sbjct: 229 VDGEGRKGEFQEKLWVYGRGGNPC-RRCGGEILREKRAGRSTHFCPRCQK 277 >gi|167626455|ref|YP_001676955.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596456|gb|ABZ86454.1| DNA-formamidopyrimidine glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 289 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 161/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS I +H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGVVKIINTSEYNKI---KHDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FN YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNKMPLEHRVLATHGVEPLTDDFNTEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKEA------ERLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQ+ Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNCY-VCSTKIESLVIAQRNTFFCKKCQR 289 >gi|88813702|ref|ZP_01128929.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] gi|88789056|gb|EAR20196.1| formamidopyrimidine DNA glycosylase [Nitrococcus mobilis Nb-231] Length = 272 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + I + LR+ + ++II + RRAKYL Sbjct: 1 MPELPEVETTRRGIEPHVRGRRIAKIIIRDARLRWPIAENLPRQAEDRRIIGIQRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LE + ++I+HLGMSGS + A H H+ I L + + Y DPR Sbjct: 61 LFRLEADATLILHLGMSGSLRLV----AAQDPPLAHAHLDIILASGQ-----ALRYTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T Q+ L +LGPEP ++F+A YL + K L++ + V GI Sbjct: 112 RFGSLHWC-TGDPAQHHLLASLGPEPLSSAFHADYLYGLSRGRRICAKALLMDSRAVVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P+R + +N +L+Q ++ VL +AI+AGG++LRD+ Sbjct: 171 GNIYANEALYRAAIRPMRSAGCIGRNR------YARLVQAVKSVLAEAIEAGGTTLRDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G GYF VYG+ G C C +IR R+T+YC CQ Sbjct: 225 DSTGQPGYFHRRLEVYGRGGAACQ-RCAGIIRMERLGQRATYYCPGCQ 271 >gi|251795551|ref|YP_003010282.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] gi|247543177|gb|ACT00196.1| formamidopyrimidine-DNA glycosylase [Paenibacillus sp. JDR-2] Length = 287 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 148/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L+ ++ + + + + R P F A G+ I V RR K Sbjct: 1 MPELPEVETVRRTLIELVAGKRIASVEVKLPRIIQRPAEPEAFEMALAGRTIQTVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + ++ L ++ HL M G + + + + H HV + T+ + Y D Sbjct: 61 FLRVVMD-GLVLVSHLRMEGRYGVFPSDEPVEL----HTHVLFHFDDGTDLR-----YKD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-NSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+FG M L E +++ PL LG EP + +F A L KK +K LLNQ+ V Sbjct: 111 VRQFGTMHLFEPGTEFEMKPLSKLGLEPLENEAFTADALKGLLGKKTGLIKPLLLNQEYV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIYV EAL+ A + P R SL + +L + I L A+ AGGSS++ Sbjct: 171 VGLGNIYVDEALFLAGIHPERTADSLKKAEWI------RLHEAIVSTLAKAVAAGGSSIK 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ G +G FQ+ VYG+ EPC S CG++I + V GR T C CQ Sbjct: 225 SYVNGQGEMGMFQHQLLVYGRKDEPCAS-CGRLIEKSVVGGRGTHTCASCQ 274 >gi|311108753|ref|YP_003981606.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] gi|310763442|gb|ADP18891.1| formamidopyrimidine-DNA glycosylase [Achromobacter xylosoxidans A8] Length = 275 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 147/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+T + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLTRLVIHESRMRWPIPPDLPATIAGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E IVHLGMSGS S A +H+HV + +DPR Sbjct: 61 LLRFEHGTQ-IVHLGMSGSLR----SVAPGEFLRKHDHVEWIFEEAV------LRLHDPR 109 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L F ++ +K LL V Sbjct: 110 RFGAVLWHPASDGPVDVHPLLAKLGIEPFDPRFDGAWLHRHFKNHSAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRARINPKTPANKLSPAR------CERLADMVRATLADALTSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G+PC C IRRIVQ R+T+YC CQ+ Sbjct: 224 YVGATGEPGAYFEIHAAVYEREGQPC-RVCSTPIRRIVQGQRATYYCPKCQR 274 >gi|299768861|ref|YP_003730887.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] gi|298698949|gb|ADI89514.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. DR1] Length = 274 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 154/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDIQK-LIGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSADFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCI-NCETTLENLKLGQRASVFCPQCQ 266 >gi|292490686|ref|YP_003526125.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] gi|291579281|gb|ADE13738.1| formamidopyrimidine-DNA glycosylase [Nitrosococcus halophilus Nc4] Length = 271 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 152/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + V + + LR+ P S G+ + V RR KYL Sbjct: 1 MPELPEVETVRCGIEPHLVGCQVRTVIVREPRLRWPVPLSLSENLTGQSFLTVQRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++ HLGMSGS + ++ + +H+H+ I L+N + +NDPR Sbjct: 61 LLNCPRGTVLL-HLGMSGSLRLVPSN----LPPKKHDHLDIVLSNGRCLR-----FNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +++P L+TLGPEP D F+ YL + + + +K ++N ++V GI Sbjct: 111 RFGSV-LWTQENPWRHPLLKTLGPEPLDPLFDGPYLFKRSRHRQAPVKVFIMNPRVVVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P R + +L + I+ VL AI AGG++LRD+V Sbjct: 170 GNIYASEALFQAGIHPRRAAGRISLAR------YQRLAEAIKTVLYQAIQAGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF + +YG+T PC CG I R+++YCT CQ Sbjct: 224 ASDGKPGYFSHQLQIYGRTAHPC-PTCGNPIHLDHIGQRASYYCTQCQ 270 >gi|325123355|gb|ADY82878.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++ ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQK-LVGQRLTGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + + + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRLTEPND----ELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + Q + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWL--NRETQGKLIDTLGPEPLSDDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLSMRQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|26991801|ref|NP_747226.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148550201|ref|YP_001270303.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida F1] gi|37999400|sp|Q88CQ5|FPG_PSEPK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198734|sp|A5WAF9|FPG_PSEP1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|24986913|gb|AAN70690.1|AE016712_8 formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440] gi|148514259|gb|ABQ81119.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudomonas putida F1] gi|313501101|gb|ADR62467.1| MutM [Pseudomonas putida BIRD-1] Length = 270 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELGLPAA----KHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPL--NHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVYCPRCQR 270 >gi|254877419|ref|ZP_05250129.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843440|gb|EET21854.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 289 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 16 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 75 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS I +H+H+ + L+++ N ++YNDPR Sbjct: 76 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKI---KHDHIILELSDDLN-----LVYNDPR 127 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 128 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 188 GNIYASEALFDSNILPTRASNTITKKEA------ERLVTSIKKILDKAIAEGGTTLKDYK 241 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 242 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 289 >gi|241668887|ref|ZP_04756465.1| formamidopyrimidine-DNA glycosylase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 274 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 162/289 (56%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L + + + + ++ LR+ + + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLTKNIISKKIKSVQINTDKLRYPVDKAQLLSLKNKVVKNIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LE NL +I+HLGMSG I +TS I +H+H+ + L+++ N ++YNDPR Sbjct: 61 IIYLEDNLQLIIHLGMSGIVKIINTSEYNKI---KHDHIILELSDDLN-----LVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + + ++ L T G EP + FNA YL + K + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNMMPLEHRVLATHGVEPLTDDFNAEYLISKLKKTSRKIKQTIMDNSIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + +L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ERLVTSIKKILDKAIAEGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRANQNC-HICNTKIESLVIAQRNTFFCKKCQK 274 >gi|167036164|ref|YP_001671395.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] gi|189044669|sp|B0KN79|FPG_PSEPG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166862652|gb|ABZ01060.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida GB-1] Length = 270 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELGLPAA----KHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPL--NHELLLRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTALREVKLGQRASVYCPRCQR 270 >gi|322411307|gb|EFY02215.1| formamidopyrimidine-DNA glycosylase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 275 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 142/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + N+ F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLESLVLGQEIVAVKVEVPNMVKSDLRIFLQILPGQTIQTIGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G ++ HL M G +++ + +H HV +L N + ++Y D R Sbjct: 61 MFDF-GQTVLVSHLRMEGKYLLFPDEVPEQ----KHFHVFFTLKNGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL+ S + R LGPEP +F +K LL+Q +VAG+ Sbjct: 111 KFGTFDLIPKSQLPDFFAQRKLGPEPRKETFKLKPFEVALQSSKKRIKPYLLDQTLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R + SL + + +L E ++L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPERLSFSLKKAE------IKRLHDETIRILQLGIEKGGSTVRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G Q+ VYG+ G+PC CGQ I ++ GR T C CQK Sbjct: 225 NALGADGTMQHYLQVYGQAGKPC-PRCGQAISKLKVGGRGTHICPKCQK 272 >gi|92115085|ref|YP_575013.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Chromohalobacter salexigens DSM 3043] gi|91798175|gb|ABE60314.1| DNA-(apurinic or apyrimidinic site) lyase [Chromohalobacter salexigens DSM 3043] Length = 281 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I + + LR P + G +I ++ RRAKYL Sbjct: 11 MPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRIGELGRRAKYL 70 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +++ HLGMSGS + +H+HV + L + Y+DPR Sbjct: 71 LMPVGAG-TLLWHLGMSGSLRLARLGDL----PRKHDHVDLVLEGGAILR-----YHDPR 120 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFGF+D ++ S P L LGPEP F+ L K+ +K L++ +V G+ Sbjct: 121 RFGFVDWLQGSPLDD-PRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGV 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + + +L + + VL AI GG++LRD+V Sbjct: 180 GNIYASEALFLAGIDPRRAAGRISR------ERYERLAEAARDVLAAAITQGGTTLRDFV 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF +VYG+ PC CG+++R + R++ +C +CQ+ Sbjct: 234 SGTGEPGYFAQRLNVYGRHDAPC-RRCGELLRLVTLGQRASVFCPHCQR 281 >gi|188591113|ref|YP_001795713.1| formamidopyrimidine-DNA glycosylase [Cupriavidus taiwanensis LMG 19424] gi|238692929|sp|B2AGU2|FPG_CUPTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170938007|emb|CAP62991.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase/ DNA lyase [Cupriavidus taiwanensis LMG 19424] Length = 290 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L+ + + + + + LR+ A + + + RR KYL Sbjct: 1 MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPGLEACLAHRLVRRIERRGKYL 60 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR- 113 L+E + ++VHLGM+G+ + + + H+H + L Sbjct: 61 LLECISADAAQPPGWLLVHLGMTGTLRVLPEAPPPGM----HDHFDLLLDAGPAPGMLAD 116 Query: 114 ---VIYNDPRRFGFMDL--VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + DPRRFG + + + +P L TLG EP D +F+ +L +++ +K Sbjct: 117 TIVLRFRDPRRFGAILWTTLPEAELASHPLLSTLGIEPFDPAFDGAWLHRHTRGRSAAIK 176 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+ IV G+GNIY E+L+RA + P L + +L Q ++ L A Sbjct: 177 TVLLSGAIVVGVGNIYASESLFRAGIRPTTAAGRLSRAR------CDRLAQAVRDTLAQA 230 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I+ GGS+LRD+V DG+ GYFQ VY + G PC C +R+IVQ RSTFYC CQ Sbjct: 231 IERGGSTLRDFVGSDGASGYFQLDCFVYDRAGLPC-RVCATPVRQIVQGQRSTFYCPKCQ 289 >gi|17545118|ref|NP_518520.1| formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum GMI1000] gi|24211708|sp|Q8Y2D7|FPG_RALSO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17427409|emb|CAD13927.1| probable formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum GMI1000] Length = 288 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE G ++VHLGM+G+ + T A H+H+ I L + + Sbjct: 61 LIECVPDIAHGPQAGAGWLLVHLGMTGTLRVLETPAA----PGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALSAHPLLRNLGIEPFDTRFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|329896521|ref|ZP_08271579.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] gi|328921738|gb|EGG29111.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium IMCC3088] Length = 271 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 151/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + N + ++ + LR+ P ++A G + + V RRAKY+ Sbjct: 1 MPELPEVETTCRGIEPHVLNKPICNVLVRDTRLRWPVPADLASALVGGQFLRVERRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + HLGM+GS I + +P+K H+HV I + + Y+DPR Sbjct: 61 VLHHTDGFVL-AHLGMTGSMRIV--AAGEPVKT--HDHVDICFDDGAILR-----YHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L TLGPEP + F+ L + K +K +++ K+V G+ Sbjct: 111 RFGSIHWI-AGQDLGHPLLDTLGPEPLSDDFSGRALYARSRGKTQAVKLFIMDAKVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L Q I+++L AI GG++LRD+V Sbjct: 170 GNIYANEALFAAGIDPRRAAGKVSLAR------YQDLAQHIKRILSYAIARGGTTLRDFV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ +VYG+ G PC++ C + + + R+T +CT CQ+ Sbjct: 224 GGDGKPGYFKQELTVYGRAGLPCVT-CSKPLHEVRLGQRTTVFCTACQR 271 >gi|90408782|ref|ZP_01216927.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] gi|90310126|gb|EAS38266.1| formamidopyrimidine-DNA glycosylase [Psychromonas sp. CNPT3] Length = 270 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + +T I + ++ LR++ P S K+++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLSKYILAKKITRIDIRQRQLRWEIPTDLSVHLVQKELLSIDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSGS + C +H+H + Y DPR Sbjct: 61 LLNFNSG-TLLIHLGMSGSLRV----CNLNTPPEKHDHADFIFD------SCLLRYTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + S Y + L LG EP F+ YL H ++ +K +++QK+V G+ Sbjct: 110 RFGAILWL-GSDPYAHKLLSHLGVEPLTEQFSGEYLHHLSKRRKLPVKQFIMDQKVVTGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + L P R + +L+ EI+KVLI AI+ GG++L+D+V Sbjct: 169 GNIYATEALFLSALRPTRSASQISLAR------YQRLVLEIKKVLILAIEQGGTTLKDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ +YGK G PC +C + + I AGR++ +C +CQ Sbjct: 223 GGDGKPGYFQQTLHIYGKAGAPC-PSCQKPLDAIKLAGRNSVFCAHCQ 269 >gi|262281147|ref|ZP_06058929.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] gi|262257378|gb|EEY76114.1| formamidopyrimidine-DNA glycosylase [Acinetobacter calcoaceticus RUH2202] Length = 274 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWAIPDDVHK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H I + + Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHFIIRFEEH------ELRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP N FNA YL + K+ K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSNDFNAEYLASKLKNKSVGTKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAADLSLEQ------IEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ G+ C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGQMCV-NCETTLENLKLGQRASVFCPECQ 266 >gi|239501755|ref|ZP_04661065.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB900] Length = 274 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NKKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLTP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|312863118|ref|ZP_07723356.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] gi|311100654|gb|EFQ58859.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis F0396] Length = 273 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKVPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLLFTDQVPTN----KHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P L K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPANKLS------KAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|237654279|ref|YP_002890593.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] gi|237625526|gb|ACR02216.1| formamidopyrimidine-DNA glycosylase [Thauera sp. MZ1T] Length = 272 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +++ + + LR P A G ++ V RRAKYL Sbjct: 1 MPELPEVETTCRGIRPHVQGRSLSRLVVRNPRLRVAVPADLPAHIEGARLEAVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++IVHLGMSGS + A H+HV + DPR Sbjct: 61 LLRFPAG-TVIVHLGMSGSLRVV----AAAEPAGAHDHVDFVFGEC------ALRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP + F+A +L + +K+ L++ + + G+ Sbjct: 110 RFGMV-VWQPGDVAAHPLLAGLGPEPLGDGFDADWLLRITRGLRAPIKHVLMDSRKLVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ L +L+ +++ L AI AGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLEPAGRLGPRR------CARLVDCVRETLAAAIAAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ GE C CG +RRIV A R++F+C CQ+ Sbjct: 223 GGDGRPGYFQQQYFVYGRDGESC-RVCGTPVRRIVSAQRASFFCPRCQR 270 >gi|193078273|gb|ABO13237.2| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 274 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|103488662|ref|YP_618223.1| formamidopyrimidine-DNA glycosylase [Sphingopyxis alaskensis RB2256] gi|123077974|sp|Q1GN82|FPG_SPHAL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|98978739|gb|ABF54890.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Sphingopyxis alaskensis RB2256] Length = 270 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 160/289 (55%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ ++ + + R +LR FP + G + +SRRAKY Sbjct: 1 MPELPEVETTVRGLVPFLEGQRLAAVTTFRPDLRRPFPVDLAQRLTGATVTRLSRRAKYG 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + +I HLGMSG + E +H+H+ + +R+ +DPR Sbjct: 61 IVSTDRDDHMIFHLGMSGRWRTEGGEPG------KHDHLLLE-----TGAGHRLFLHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV + TLGPEP + F+A L F + + +K LL+Q +VAG+ Sbjct: 110 RFGSIDLVAGDPLASFAAFVTLGPEPLSDDFDAALLARAFAARRAPVKAMLLDQNVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYVCEAL A++SP+ G PK L L+ I+ VL AI AGGS+LRD++ Sbjct: 170 GNIYVCEALNMARISPLMPAA------GVPKAKLAALVSAIRAVLTAAIAAGGSTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +GYF + VYG+ GE C CG I R+VQ+GRSTFYC CQ+ Sbjct: 224 SPDGDLGYFAKDWRVYGREGEACE--CGGAIVRVVQSGRSTFYCRKCQR 270 >gi|83590674|ref|YP_430683.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] gi|123524146|sp|Q2RHE9|FPG_MOOTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83573588|gb|ABC20140.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] Length = 274 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L ++ + + ++ + P FS G+ I + RR KY Sbjct: 1 MPELPEVETIKRTLTPCLREQKIARVEVYHPGVIAAPDPETFSRLLAGRIITGLDRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L G ++VHL M+G + + H HV SL + + + D Sbjct: 61 LLVHLSGEYCLVVHLRMTGRLVFTEGAAPLA----PHTHVVFSLAGGPSLR-----FVDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L + P LR LGPEP D +F+A+ L + +K LL+Q++VAG Sbjct: 112 RRFGRLYLAAKAEVETLPGLRDLGPEPLDPAFDALALAAILAGRRRPIKQVLLDQRLVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A + P R SL + +L +Q+VL I G+S+RDY Sbjct: 172 IGNIYADEMLFAAGIDPRRPAASLNHEE------VARLRGAMQRVLEQGIANRGTSIRDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G Q VYG+TG PC CGQ + R+ GRST +C CQ Sbjct: 226 VDGSGRQGSNQEHLQVYGRTGRPC-PRCGQPLERVRLGGRSTHFCPRCQ 273 >gi|169794826|ref|YP_001712619.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|215482373|ref|YP_002324555.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|301510336|ref|ZP_07235573.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB058] gi|332852280|ref|ZP_08434085.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332870503|ref|ZP_08439267.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] gi|169147753|emb|CAM85616.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|213988590|gb|ACJ58889.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|332729410|gb|EGJ60750.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013150] gi|332732240|gb|EGJ63508.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6013113] Length = 274 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP + F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|300692626|ref|YP_003753621.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] gi|299079686|emb|CBJ52363.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum PSI07] Length = 288 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVTRVLRRGKYL 60 Query: 61 LIE---------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE L ++VHLGM+G+ + T P+ H+H+ I L + + Sbjct: 61 LIECVPDAAREPLAVAGWLLVHLGMTGTLRVLET----PVAPGTHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSAHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|159030210|emb|CAO91102.1| mutM [Microcystis aeruginosa PCC 7806] Length = 285 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 135/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + ++ L R + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGKKIIGGEVLLQRTLAYPNCEATFLQGITQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + PI H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPLPI----HTRLRFFFANQQELR-----FVD 111 Query: 119 PRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + + L+ LG EP D +F YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTPDYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P L + L + I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHPQTAANLLKIEQ------IDLLTKNIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + + VYG+TGE C CG I RI +GRS+ +C CQ Sbjct: 226 SDFLHVTGVNGNYGSMAWVYGRTGENC-RLCGATIARIKLSGRSSHFCPQCQ 276 >gi|226199567|ref|ZP_03795124.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] gi|254296087|ref|ZP_04963544.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|157806100|gb|EDO83270.1| formamidopyrimidine-DNA glycosylase [Burkholderia pseudomallei 406e] gi|225928448|gb|EEH24478.1| DNA-formamidopyrimidine glycosylase [Burkholderia pseudomallei Pakistan 9] Length = 273 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 17/288 (5%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P F+ R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + P +H+HV + + + DPRRFG Sbjct: 61 VDAGWF-IVHLGMTGTLRVLPNDAPPPAPA-KHDHVDWIFDE------FVLRFRDPRRFG 112 Query: 124 FMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 + + + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 113 AVLWHPRDAGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVVGVG 172 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E+L+RA + P + +L ++ L DAI+ GGS+LRD+V Sbjct: 173 NIYASESLFRAGIRPTTAAGRVSLPR------YERLADAVRATLADAIERGGSTLRDFVG 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G GYFQ VY + GEPC CG IR+IVQ RST++C CQ+ Sbjct: 227 SNGESGYFQLDCFVYDRAGEPC-RVCGAPIRQIVQGQRSTYFCPNCQR 273 >gi|229823044|ref|ZP_04449113.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] gi|229787483|gb|EEP23597.1| hypothetical protein GCWU000282_00339 [Catonella morbi ATCC 51271] Length = 292 Score = 287 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----FSAATRGKKIIDVSRR 56 MPELPEVE +RR L +++ + ++ + L P + RG+ I V RR Sbjct: 1 MPELPEVETVRRGLTSLIEGKIIAEVQVFWPKLIDLRPQETLAQWQDYLRGQTIQAVGRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL ++ G ++ HL M G + + +P P+H H+ ++ + ++ Y Sbjct: 61 GKYLWLDF-GPQVLVFHLRMEGKCHV-YPPGQEPKTKPKHVHLIMTFKDGSH-----FYY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG + Y + LGPEP +F+ + Q LK LL+Q + Sbjct: 114 EDVRKFGRFSYMAKDQLESYFASKKLGPEPTQEAFDLAHFRAQLASSKRALKPLLLDQTL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIYV E ++A++ P R L + + +L I ++L A+ AGGS++ Sbjct: 174 VAGLGNIYVDEVCFKAQIHPARPACDLTVHE------VKRLHAAIIEILAAAVQAGGSTI 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R Y + G+ G +Q + +VYG+ EPC CG++I ++ GR T +C +CQ Sbjct: 228 RTYRNSLGAAGTYQESLAVYGRVDEPC-ERCGRLIHKVQLGGRGTHFCPHCQ 278 >gi|308068369|ref|YP_003869974.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305857648|gb|ADM69436.1| Formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) [Paenibacillus polymyxa E681] Length = 276 Score = 287 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R L ++ + + + ++ + R D F+ +I V RR K Sbjct: 1 MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIQAFAMELADHRITGVERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L I L+ L ++ HL M G + + ++ +H HV + T + Y D Sbjct: 61 FLRILLD-GLVLVSHLRMEGRYGLY----SQHDPVEKHTHVIFHFKDGTELR-----YQD 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L PL LG EP D +F L +++++K ALLNQ V Sbjct: 111 VRQFGTMHLFPAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQAYVV 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIYV E+L++A + P + +SL + + L + I L +I GGSS++ Sbjct: 171 GIGNIYVDESLFKAGIHPAQPAKSLTDSQ------FHVLHEAIVSTLGASIQVGGSSIKS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +V+ G G FQ+ +YG+ +PC+ NCG +I + V AGR T +C CQ Sbjct: 225 FVNGQGKTGDFQHQLQIYGRNAKPCI-NCGTLIEKSVVAGRGTHHCPVCQ 273 >gi|293611034|ref|ZP_06693333.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826686|gb|EFF85052.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 274 Score = 287 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + ++ HLGMSGSF + + + +H+H+ I + ++ Y+DPR Sbjct: 59 LAKFEQDQ-MLWHLGMSGSFRLTEPND----ELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|322509311|gb|ADX04765.1| mutM [Acinetobacter baumannii 1656-2] Length = 274 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVQSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|260557193|ref|ZP_05829409.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] gi|260409299|gb|EEX02601.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] Length = 274 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|289209161|ref|YP_003461227.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] gi|288944792|gb|ADC72491.1| formamidopyrimidine-DNA glycosylase [Thioalkalivibrio sp. K90mix] Length = 271 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L +++ T+ + + LR+ P G +I ++RRAKYL Sbjct: 1 MPELPEVETTRRGLSPLLEGQTIEWLEVRNGRLRWPVPEELPGRLAGARITTLARRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + +++ HLGMSGS C + H+H+ + LTN +V ++DPR Sbjct: 61 LLNTDRGGALL-HLGMSGSLR----HCMPGVPLRTHDHLILHLTNGA-----QVRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + +P L LGPEP D +FN +L + + +K +++Q +V G+ Sbjct: 111 RFGCCLPLPETGEP-HPLLAALGPEPLDATFNGDHLFRRSRGRRGPIKAFIMDQDVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L I+ VL AI+ GG++LRD++ Sbjct: 170 GNIYATEALFLAGIRPGRAAGRVTRAE------YERLAGFIRTVLGAAIEQGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF+ + VYG+ GEPCL C +R R++ YC CQ+ Sbjct: 224 REDGTHGYFRQSLRVYGRAGEPCLE-CATPLRNRRIGQRASAYCPTCQR 271 >gi|226942502|ref|YP_002797575.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] gi|226717429|gb|ACO76600.1| formamidopyrimidine-DNA glycosylase [Azotobacter vinelandii DJ] Length = 282 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 149/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V + + + LR+ P G++I V RRAKYL Sbjct: 13 MPELPEVETTRRGIAPHLVGQRVERVVVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL 72 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSGS + + +H HV I L + + Y DPR Sbjct: 73 LIRAEAG-TLIGHLGMSGSLRLVEAG----LPAVRHEHVDILLESG-----LALRYTDPR 122 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ ++ ++ LR LGPEP F+ L K+ +K +++ +V G+ Sbjct: 123 RFGA--LLWSADPLEHELLRRLGPEPLGEDFDGERLYRLSRGKSVAVKPFIMDNAVVVGV 180 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R S+ + +L +EI+++L AI+ GG++LRD+V Sbjct: 181 GNIYASEALFAAGIDPRRAAGSVSRAR------YRRLAEEIRRILAQAIECGGTTLRDFV 234 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG + + R++ YC CQ+ Sbjct: 235 GGDGKPGYFQQTLLVYGRGGEFC-KVCGSTLHEVRLGQRASVYCGRCQR 282 >gi|318042468|ref|ZP_07974424.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0101] Length = 294 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 144/295 (48%), Gaps = 24/295 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L + + + + R P F +A G + RR KY Sbjct: 14 PELPEVETVRRGLEQQVSGFEIARVEVLRARAIASPPLPELFCSALEGCTVQQWLRRGKY 73 Query: 60 LLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+ L+ VHL M+G F+ +T P + +H V I NT++ + Sbjct: 74 LMATLQRGGADAGHWGVHLRMTGQFLWMNT----PAEPCRHTRVRI-----WNTQEQELR 124 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + LR LGPEP F+A +L + ++K ALL+ Sbjct: 125 FVDLRSFGEMWWVPPGEPLESVMTGLRRLGPEPFSTDFSAEHLAAKLAGSTRSIKTALLD 184 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY E+L+ ++++P + L L +L + +VL +I AGG Sbjct: 185 QALVAGVGNIYADESLFMSRIAPQTPSGQLAPAQ------LKRLHSALVEVLEASIGAGG 238 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G+ G + NA VY ++GEPC CG I+R GRS+ +C CQ Sbjct: 239 TTFSDFRDLTGTNGNYGNAAWVYRRSGEPC-RVCGTPIQRDKLGGRSSHWCPNCQ 292 >gi|260548865|ref|ZP_05823087.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] gi|260408033|gb|EEX01504.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] Length = 274 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDDI-QRLVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDEFRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVIEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ Y + GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYSRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|325290276|ref|YP_004266457.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] gi|324965677|gb|ADY56456.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Syntrophobotulus glycolicus DSM 8271] Length = 273 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE IR +L + + + L ++ + + GKK+ + RR KY Sbjct: 1 MPELPEVENIRLSLAKNIIGQEIKEFKLFWPDVFVNATDLDPNDLLIGKKVESLGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L G++++I+H M+G I + +H H L N ++ ++D Sbjct: 61 LFIHLAGSVTLILHFRMTGKLIYYQGE----HEPEKHTHAVFYLENG------QIHHSDM 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + LVET+L + P + LGPEP D F+ + K S +K+ALL+Q+ VAG Sbjct: 111 RKFGRIQLVETALLGKVPAIAKLGPEPFDERFSIEVFGQRLSGKKSTIKSALLDQETVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A + P R+T SL + + L IQ L I+AGG+S RDY Sbjct: 171 IGNIYADEALFMAGIRPERRTASLKISE------VILLYDAIQGALKAGIEAGGTSFRDY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ G FQ VYG+ G+ C CG ++ + AGR+T +C CQ Sbjct: 225 RDGDGNKGLFQENLYVYGRAGQNC-KVCGSVLGKTKTAGRTTVFCPVCQ 272 >gi|299068042|emb|CBJ39256.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CMR15] Length = 288 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVARVLRRGKYL 60 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE G ++VHLGM+G+ + T A H+H+ I L + + Sbjct: 61 LIECVPDVARGPQAGAGWLLVHLGMTGTLRVLETPAA----PGTHDHLDIELADADG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + + +P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHDGDEAALSAHPLLRNLGIEPFDARFDGNWMHARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPACQR 288 >gi|322517150|ref|ZP_08070034.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] gi|322124300|gb|EFX95811.1| DNA-formamidopyrimidine glycosylase [Streptococcus vestibularis ATCC 49124] Length = 273 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ T+ + + + F G+ I + RR KYL Sbjct: 1 MPELPEVETVRRGLERLVVGRTILSLEVKIPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G L +I HL M G +++ +H H+ L + + ++Y D R Sbjct: 61 IFDF-GQLIMISHLRMEGKYLLFTDQVPTN----KHFHLFFKLDDGST-----LVYQDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG DL++ + Y + LGPEP +F +K LL QK+VAG+ Sbjct: 111 KFGTFDLLDRKQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGL 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R L K + ++ + +L I+ GGS++R Y Sbjct: 171 GNIYVDEVLWAAKVHPETPARELS------KAAMKRVHDQTIAILQLGIEKGGSTIRTYR 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYGKTG+PC C I +I GR T C +CQK Sbjct: 225 NALGEDGTMQDYLRVYGKTGQPC-PRCASTIEKIRLGGRGTHLCPHCQK 272 >gi|71279847|ref|YP_266979.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] gi|90101300|sp|Q48AD4|FPG_COLP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71145587|gb|AAZ26060.1| formamidopyrimidine-DNA glycosylase [Colwellia psychrerythraea 34H] Length = 271 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V+++ + K LR+ P +A G ++ V RRAKYL Sbjct: 1 MPELPEVEVCRLGISPHVIAQEVSEVIIRNKRLRWPIPDEVCSAV-GLPVLKVERRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++++HLGMSG+ + +H+H + + + + NDPR Sbjct: 60 LLRFSTG-TLLLHLGMSGTIRVIEQDTP----VAKHDHFDLVFKHGKSLR-----LNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + L LGPEP + F YL + + +K L+N +V G+ Sbjct: 110 RFGAVLWLAND-EDELGLLAKLGPEPLSDDFAEGYLFSKAKNRKVPIKTFLMNNHVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL++A + P K + + ++ L I+KVL AI GG++L+D+ Sbjct: 169 GNIYANEALFQAGILPTAKAKDIDEHRMNS------LTAIIKKVLSAAIAQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + VYG+ GE C++ C ++ I Q+ RS+ +C CQ+ Sbjct: 223 QADGRPGYFAQSLMVYGRAGEACVT-CKTKLQEIRQSNRSSVFCPSCQQ 270 >gi|85714159|ref|ZP_01045148.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] gi|85699285|gb|EAQ37153.1| formamidopyrimidine-DNA glycolase [Nitrobacter sp. Nb-311A] Length = 276 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 115/280 (41%), Positives = 165/280 (58%), Gaps = 14/280 (5%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ T+ + RK+LRF F F A G+ +I + RRAKYLL++L +++HLGMS Sbjct: 1 MEGATIIRAEIRRKDLRFPFQTDFVARLEGQTVIGIGRRAKYLLVDLASGDVLLMHLGMS 60 Query: 78 GSFIIEHTSC--------AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 GSF + + + + H+HV ++++ +++NDPRRFG+M +V Sbjct: 61 GSFRVIDAAGVAAPGDFHQRRNEARAHDHVRFTMSSGAE-----IVFNDPRRFGYMKVVA 115 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L+ LGPEP N F+A L K ++LK ALL+Q++VAG+GNIYVCEAL Sbjct: 116 RAALGDEPLLKGLGPEPLGNEFDAAMLAQSCRNKKTSLKAALLDQRVVAGLGNIYVCEAL 175 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 +RA+LSP R +L G P + +L+ I VL AI AGGSSLRD+ G +GYF Sbjct: 176 FRARLSPRRLAATLALKTGAPSERAERLVAAIHDVLNQAIKAGGSSLRDHRRTTGELGYF 235 Query: 250 QNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q++F VY + G+ C + C +RR Q GRSTF+C CQ Sbjct: 236 QHSFQVYDREGDTCRMPACKGTVRRFTQNGRSTFWCPGCQ 275 >gi|260435903|ref|ZP_05789873.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] gi|260413777|gb|EEX07073.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8109] Length = 278 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R P F A G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFKIAQVEVCRSRAIASPGGPEAFVAGLCGMTVGQWQRRGK 60 Query: 59 YLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE VHL M+G F +P + +H V + N+K+ + + Sbjct: 61 YLMAALEPEGGVWGVHLRMTGQFQWH----EQPSEPCKHTRVRL-----WNSKEQELRFV 111 Query: 118 DPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + L LGPEP F+A YL + + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPGQAIEEVITGLTRLGPEPFSTDFSASYLKQKLKGSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG GNIY E+L+ + ++P L L +L + VL +I AGG++ Sbjct: 172 LVAGAGNIYADESLFASGIAPYTPAGQLELKQ------LERLRDALVNVLTISIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + G+PC +CG I+R +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGDPC-RSCGTPIQREKLSGRSTHWCPTCQ 277 >gi|225868141|ref|YP_002744089.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] gi|225701417|emb|CAW98513.1| formamidopyrimidine-DNA glycosylase [Streptococcus equi subsp. zooepidemicus] Length = 281 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + + + + HF G+++ V RR KYL Sbjct: 10 MPELPEVETVRRGLERLVVGKQIAAVTVKVPKMVKTDLEHFVMTIPGQQVQGVDRRGKYL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L +I HL M G +++ A + + +H HV +++T+ + ++Y D R Sbjct: 70 LFDF-GQLVMISHLRMEGKYLLF----ADTVPDHKHFHVFLTMTDGST-----LVYQDVR 119 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +L+ S + R LGPEP +F ++K LL+Q +VAG+ Sbjct: 120 KFGTFELLPKSELAAFFQKRQLGPEPTKQAFRLKPFEAALLASRKSIKPHLLDQTLVAGL 179 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW AK+ P R++ SL + + ++ E ++L I+ GGS++R Y Sbjct: 180 GNIYVDEVLWAAKVHPERRSASLKKAE------IKRIHDETIRILQLGIEKGGSTVRTYQ 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ VYG+TG+PC CG I ++ GR T C CQ+ Sbjct: 234 NTLGMNGSMQHYLMVYGQTGKPCQ-RCGAAIVKLKVGGRGTHVCPRCQR 281 >gi|86604927|ref|YP_473690.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] gi|86553469|gb|ABC98427.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-3-3Ab] Length = 283 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L + + + + + + + + F+ G + RR KY Sbjct: 1 MPELPEVETVRRDLQRLTLGLCILSVEVLLPRTVAYPGKDEFAQGLAGSCLTQWQRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ + VHL M+G + S PI H V + L + + + D Sbjct: 61 LLGSLDSGAVLGVHLRMTGQLLWVQGSAPLPI----HTRVRLHLEQG-----WELRFVDL 111 Query: 120 RRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG M LV ++ + P L++LGPEP +F+ Y K +K ALL+Q +V Sbjct: 112 RTFGQMWLVPAGVEPETVIPALQSLGPEPLSPAFSEAYFQAALQKSRRPIKAALLDQSLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+ + + P L + +L + + +VL ++ G++LR Sbjct: 172 AGVGNIYADEALFLSGIHPSTPAAQLSDAAKS------RLRESLIQVLRAGLEQRGTTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G G +Q VYG+ G+PC CG I+R +GRS +C CQ Sbjct: 226 DYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRSKLSGRSAHFCPRCQ 275 >gi|116490733|ref|YP_810277.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290890153|ref|ZP_06553235.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] gi|116091458|gb|ABJ56612.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Oenococcus oeni PSU-1] gi|290480197|gb|EFD88839.1| hypothetical protein AWRIB429_0625 [Oenococcus oeni AWRIB429] Length = 274 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L +N + D+ + L F G + + RR K+L Sbjct: 1 MPELPEVETVRRGLKKYFENEKIKDLKIIYPKLLDSDRTEFIEKVVGSTVSRIDRRGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ NL+I+ HL M G + +E A +H + L N +V Y+D R Sbjct: 61 LFRLDNNLTIVSHLRMEGRYSVEAAQEAPH----KHTEMIFELENGK-----QVFYDDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M LV++ + + + ++GPEP ++ Y ++ K +K LL+Q VAG Sbjct: 112 KFGKMKLVKSGNEAVEVKSIGSMGPEPVESDLTFDYFYNRLQKSKKAVKALLLDQNNVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW +++SP+R T + + L + I + L AI+ GGS++ + Sbjct: 172 IGNIYADEVLWLSEISPLRPTNEISEEEADN------LRENIIRELAFAIENGGSTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G Q+ YG+ G+PC + G++I +I A R T YC CQK Sbjct: 226 IDASGHTGRMQDKLHAYGRAGQPCERDGGELI-KIRVAQRGTTYCPKCQK 274 >gi|184159399|ref|YP_001847738.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|332876239|ref|ZP_08444014.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] gi|183210993|gb|ACC58391.1| Formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|323519338|gb|ADX93719.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii TCDC-AB0715] gi|332735511|gb|EGJ66563.1| DNA-formamidopyrimidine glycosylase [Acinetobacter baumannii 6014059] Length = 274 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 156/288 (54%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|198284465|ref|YP_002220786.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665209|ref|YP_002427132.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226704425|sp|B7J8I7|FPG_ACIF2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238689974|sp|B5ENT6|FPG_ACIF5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|198248986|gb|ACH84579.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517422|gb|ACK78008.1| formamidopyrimidine-DNA glycosylase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 270 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ + + LR +A G++++++ RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLRGRRLEGAVVRDSRLRLPVNDDLAARVSGQRLLNLRRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++LE +I++HLGMSG + S +H+HV + ++ + ++DPR Sbjct: 61 LLDLERG-TILIHLGMSGHLRVLPQSAPVQ----KHDHVDLLFADD-----LCLRFHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + +P L+ LGPEP + F A YL + + +K+ L++ IV G+ Sbjct: 111 RFGAVLWLDDA--DHHPLLQHLGPEPLGDVFGAEYLYQRGRNRQIPVKSFLMDAHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + KL+Q ++ VL AI GG++LRD+ Sbjct: 169 GNIYANESLFAAGIDPRRPAGRIALPR------YMKLVQAVRTVLEAAIAQGGTTLRDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF+ + +VYG+ GEPC CG ++ + GR+T YC+ CQ+ Sbjct: 223 RPDGGNGYFRLSLAVYGREGEPCTH-CGAPLQGVRIGGRATIYCSQCQR 270 >gi|71909338|ref|YP_286925.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] gi|90101302|sp|Q479M6|FPG_DECAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71848959|gb|AAZ48455.1| DNA-(apurinic or apyrimidinic site) lyase [Dechloromonas aromatica RCB] Length = 277 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 153/293 (52%), Gaps = 22/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LR + P + G +++ V RR KYL Sbjct: 1 MPELPEVEVCRRGLEPELAGQVIQGVVIRAPKLRHEIPPALATLLPGCRVVAVRRRGKYL 60 Query: 61 LIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L++ E ++I+HLGMSG+ + +H+H + L + + Sbjct: 61 LLDCERRGVQGTLIIHLGMSGNLRFVPFD----LPPAKHDHFELVL------AGQILRFA 110 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + +P L T G EP F A +L +++ +K L++ Sbjct: 111 DPRRFGVVLWQPGPPASAECHPLLATQGIEPLSEMFTAEWLYEAIARRSGPIKPTLMDSH 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V GIGNIY E+L+RA +SP+R + + L+ I++ L DAI AGGSS Sbjct: 171 LVVGIGNIYASESLFRAGISPLRAANRVSRAR------YEILVPAIRETLSDAIAAGGSS 224 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +RDYVH DG G FQ VY + +PCL CG ++R+I QAGRST+YCT CQ Sbjct: 225 IRDYVHSDGGAGCFQIQAGVYDRANQPCL-RCGGVVRQIRQAGRSTYYCTGCQ 276 >gi|315178473|gb|ADT85387.1| formamidopyrimidine-DNA glycosylase [Vibrio furnissii NCTC 11218] Length = 267 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 100/276 (36%), Positives = 143/276 (51%), Gaps = 20/276 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + TV + LR+D P G+ I +SRRAKYL+IE + IV Sbjct: 2 GISPHLVGETVRSLTFRTPKLRWDIPAEL-KQMEGQVITAISRRAKYLMIETSVGSA-IV 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS + +H+HV ++LTN + YNDPRRFG Sbjct: 60 HLGMSGSLRVLDGD----FPPAKHDHVDLTLTNGKVLR-----YNDPRRFGAWLWCPAGE 110 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 ++ L +GPEP + FNA YL H+ KK +K+ +++ KIV G+GNIY E+L+ A Sbjct: 111 HHEV--LGHMGPEPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGVGNIYANESLFSA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P+R SL + T L+ +I+ VL AI GG++L+D+ DG GYF Sbjct: 169 HIHPLRPAHSLSEAEWTS------LVADIKAVLTTAIAQGGTTLKDFAQADGKPGYFAQE 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VYGK G+PC CG+ I + R++F+C CQ Sbjct: 223 LQVYGKKGQPC-PRCGEPIAELKIGQRNSFFCLQCQ 257 >gi|15836676|ref|NP_297364.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|15836775|ref|NP_297463.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa 9a5c] gi|28197991|ref|NP_778305.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|28198069|ref|NP_778383.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa Temecula1] gi|71275496|ref|ZP_00651782.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71898603|ref|ZP_00680773.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|170729297|ref|YP_001774730.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|170729377|ref|YP_001774810.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M12] gi|182680617|ref|YP_001828777.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182680697|ref|YP_001828857.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|54037120|sp|P64155|FPG_XYLFT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040774|sp|P64154|FPG_XYLFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|9104844|gb|AAF82884.1|AE003861_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|9104967|gb|AAF82983.1|AE003871_1 formamidopyrimidine DNA glycosylase [Xylella fastidiosa 9a5c] gi|28056051|gb|AAO27954.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|28056129|gb|AAO28032.1| formamidopyrimidine DNA glycosylase [Xylella fastidiosa Temecula1] gi|71163796|gb|EAO13512.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Dixon] gi|71731550|gb|EAO33611.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|167964090|gb|ACA11100.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|167964170|gb|ACA11180.1| DNA-formamidopyrimidine glycosylase [Xylella fastidiosa M12] gi|182630727|gb|ACB91503.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|182630807|gb|ACB91583.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa M23] gi|307579076|gb|ADN63045.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] gi|307579162|gb|ADN63131.1| formamidopyrimidine-DNA glycosylase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 271 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 160/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR+D P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ S+I+HLGMSG+ + A H+HV I L N + +NDPR Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRL----LAPETPLRPHDHVDIMLNNRRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV G+ Sbjct: 112 RFGCLLWQEDGQI--HPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTFLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP L + + +L + ++ +L+ AI+ GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISP------LCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 224 SPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|110835444|ref|YP_694303.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] gi|122959249|sp|Q0VLB7|FPG_ALCBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110648555|emb|CAL18031.1| formamidopyrimidine-DNA glycosylase [Alcanivorax borkumensis SK2] Length = 269 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ + + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHLQGRILKSVTVREPRLRWPVSEAIYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE +++HLGMSG+ + + +H+HV + L + + +NDPR Sbjct: 60 LIELEHGQ-LLIHLGMSGTLRVVDMD----LPLRKHDHVDLLLDSGKVLR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + L++LGPEP +SFN +L + + +K+ +++ V G+ Sbjct: 110 RFGSVLF--QGGDQPHSLLQSLGPEPLSDSFNGQWLFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + L + I++VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAAGRISLAR------YQALAEAIKRVLAQAIEAGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PC+ C +++ RST YC CQ+ Sbjct: 222 RADGQPGYFAQSLNVYGRAGQPCV-QCDAILKADRHGQRSTAYCPQCQR 269 >gi|207727840|ref|YP_002256234.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] gi|206591081|emb|CAQ56693.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum MolK2] Length = 288 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 146/300 (48%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + A H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEVPAA----PGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMHARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|171464197|ref|YP_001798310.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692824|sp|B1XS61|FPG_POLNS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171193735|gb|ACB44696.1| formamidopyrimidine-DNA glycosylase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 278 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + ++ V+ + + LR+ P + + G+ + + RR KYL Sbjct: 1 MPELPEVEVTRLGIAPHLEGRKVSAVKIIDGRLRWPVPANLTKTLPGQTVNGIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E++ +++HLGM+G+ + +S H+ VT+ K + +DPR Sbjct: 61 LLEMDTGY-LLIHLGMTGTLRVLPSSDPLKT----HDRVTLEF------GKLSLRLHDPR 109 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIY----LTHQFHKKNSNLKNALLNQ 174 +FG + ++ L+ LG EP + F+ L K++ +K LL Sbjct: 110 KFGAVLWHPKSKGPIKKFILLQKLGVEPFSSEFSGELGAEILYQTSRKRSVAVKQFLLAG 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V G+GNIY E+L+ A + P + L + + +L + ++ +L AI+AGGS Sbjct: 170 QAVVGVGNIYCSESLFEAGIHPAKAAGKLTRPQCS------RLAKAVRSILKKAIEAGGS 223 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SL+D+V+ DG G+F VY + G PC C I ++VQ R+T++C+ CQK Sbjct: 224 SLKDFVNSDGDPGHFMVQTKVYDRKGLPC-KVCKTPISQMVQGQRTTYFCSQCQK 277 >gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 277 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E +H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETVPY----KHTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPKTPANVLDEVQ------LSVLRANIISEIKRAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|34581344|ref|ZP_00142824.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] gi|28262729|gb|EAA26233.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] Length = 273 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKHSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDLLEKE-FFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRD------DEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 134/289 (46%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ + D+ L + F + + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L N +I+ HL M G + +E +H + L++ K + YND R Sbjct: 61 LLRLANNHTIVSHLRMEGQYSVESLETVPY----KHTEIVFELSD-----KRALFYNDTR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M L T + + P L LGPEP + Y+ F K +K LL+Q +AG Sbjct: 112 RFGRMALTTTGFENTEVPSLSKLGPEPTEEQLTLPYMKAVFSKSRRPVKTFLLDQTQIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E LW++K+ P L + L L I + AI G+++ + Sbjct: 172 IGNIYADEVLWQSKIHPKTPANVLDEVQ------LSVLRANIISEIKRAIKHHGTTVHSF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +G FQN YG GEPCL C + +I R T +C +CQ Sbjct: 226 SNVFGEVGKFQNELQAYGHAGEPCL-RCNTPMVKIKVGQRGTTFCPFCQ 273 >gi|262371760|ref|ZP_06065039.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] gi|262311785|gb|EEY92870.1| formamidopyrimidine-DNA glycosylase [Acinetobacter junii SH205] Length = 273 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 161/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L+ +++ V I ++ +LR+ P+ + G++++ + RR+KY+ Sbjct: 1 MPELPEVETTKTSLLPLLE-QRVQSIQVYNSSLRWPIPNDLNK-LIGQRLMALKRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFERDQ-MLWHLGMSGSFRL----CEANEELRKHDHLVIDFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + Q + TLGPEP ++FNA+YL + KN +K AL++ V G+ Sbjct: 108 RFGCILWLDQNN--QEKLIDTLGPEPLSDAFNAVYLFEKLSNKNVGIKIALMDNHNVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + +L + L+ E++++L AI+ GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPASTLSLVQ------IESLVIEVKRILKHAIELGGSTLRDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|163858324|ref|YP_001632622.1| formamidopyrimidine-DNA glycosylase [Bordetella petrii DSM 12804] gi|229541069|sp|A9I6Y3|FPG_BORPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|163262052|emb|CAP44354.1| fpg [Bordetella petrii] Length = 275 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 147/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGKTLRRLLVRESRMRWPIPADLPGLLSGRAVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + IVHLGMSGS A +H+HV + T + +DPR Sbjct: 61 LLRFEHG-TQIVHLGMSGSLRSVPAGEA----PRKHDHVDWIFDHAT------LRLHDPR 109 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L QF + +K ALL V Sbjct: 110 RFGAVLWHPDTAGPIAAHPLLARLGIEPFDPRFDGAWLHSQFRNRAIAVKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P R + + +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTPARRISRAR------CARLADMVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF+ +VY + G PC CG IRR+VQ R+T+YC CQK Sbjct: 224 YVGASGQPGSYFEIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYYCPSCQK 274 >gi|157828891|ref|YP_001495133.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933617|ref|YP_001650406.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rickettsia rickettsii str. Iowa] gi|166198743|sp|A8GTA0|FPG_RICRS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|189044670|sp|B0BUU0|FPG_RICRO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157801372|gb|ABV76625.1| formamidopyrimidine-DNA glycosidase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908704|gb|ABY73000.1| formamidopyrimidine-DNA glycosylase [Rickettsia rickettsii str. Iowa] Length = 273 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKE-FFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRD------DEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|262379123|ref|ZP_06072279.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] gi|262298580|gb|EEY86493.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SH164] Length = 276 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 161/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 5 MPELPEVETTKKSLEPLLQ-QKVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 63 LAQFEHD-TMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + Q + LGPEP +FN YL ++ K +K AL++ +V G+ Sbjct: 112 RFGCILWL--NHETQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++ P + SL + +L+ EI+++L AI+ GGS+LRDY Sbjct: 170 GNIYATESLFNTRIHPAQPASSLSYEQ------IDQLVIEIKRILKFAIELGGSTLRDYS 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 224 NAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 270 >gi|83746559|ref|ZP_00943609.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|207742244|ref|YP_002258636.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] gi|83726693|gb|EAP73821.1| Formamidopyrimidine-DNA glycosylase [Ralstonia solanacearum UW551] gi|206593632|emb|CAQ60559.1| formamidopyrimidine-dna glycosylase (fapy-dnaglycosylase) (dna-(apurinic or apyrimidinic site) lyase mutm) (ap lyase mutm) protein [Ralstonia solanacearum IPO1609] Length = 288 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + A H+H+ I L + + Sbjct: 61 LIECVPDAAREPQAVAGWLLVHLGMTGTLRVLEVPAA----PGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------CAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG +IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTLIRQIVQGQRSTFYCPVCQR 288 >gi|255318652|ref|ZP_05359883.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] gi|255304334|gb|EET83520.1| formamidopyrimidine-DNA glycosylase [Acinetobacter radioresistens SK82] Length = 272 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 161/288 (55%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +++L +++ V + + LR+ P +G+K+I ++RR+KY+ Sbjct: 1 MPELPEVETTKKSLEPLLQ-QKVMSVEVREPRLRWAIPQDIQK-LQGQKLIRLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E + +++ HLGMSGSF + C + +H+H+ IS N ++ Y+DPR Sbjct: 59 LAQFEHD-TMLWHLGMSGSFRL----CEPATELRKHDHLIISFEN------IQLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + Q + LGPEP +FN YL ++ K +K AL++ +V G+ Sbjct: 108 RFGCILWL--NHETQNKLIDPLGPEPLSEAFNTEYLVNKLKNKQVGIKVALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ ++ P + SL + +L+ EI+++L AI+ GGS+LRDY Sbjct: 166 GNIYATESLFNTRIHPAQPASSLSYEQ------IDQLVIEIKRILKFAIELGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ GE C+ NC ++ I R++ +C CQ Sbjct: 220 NAAGENGYFQQTLLAYGREGEMCI-NCETPLQNIRLGQRASVFCPECQ 266 >gi|229587037|ref|YP_002845538.1| formamidopyrimidine-DNA glycosylase [Rickettsia africae ESF-5] gi|259647149|sp|C3PLF5|FPG_RICAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|228022087|gb|ACP53795.1| Formamidopyrimidine-DNA glycosidase [Rickettsia africae ESF-5] Length = 273 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLTTEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ GI Sbjct: 112 RFGMIYSFKTDLLEKE-FFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRD------DEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|254284042|ref|ZP_04959010.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] gi|219680245|gb|EED36594.1| formamidopyrimidine-DNA glycosylase [gamma proteobacterium NOR51-B] Length = 268 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + +V + + LR+ P G + V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHVIGQSVVAVDVRDSRLRWPVPDDL-DRLVGGRFTAVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + +++HLGMSGS + H+HV I L++ + Y+DPR Sbjct: 60 LLDHDHG-VLMIHLGMSGSLRLVSADTPVMF----HDHVDIGLSSG-----LTLRYHDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG V+ + L LGPEP F+ L + + + +K +++ +IV G+ Sbjct: 110 RFGSFHWVDDD---HHALLDHLGPEPLSGDFDGALLYRRSRGRKTAVKQFVMDGRIVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + L I++VL AI+ GG++LRD+V Sbjct: 167 GNIYANEALFMAGIRPDRAAGRVALKR------YETLGDAIKQVLGGAIEQGGTTLRDFV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS GYF +VYG+ +PC C + GRST +C CQ+ Sbjct: 221 GGDGSPGYFAQQLAVYGRARQPC-RRCESALTETRLGGRSTVFCKTCQR 268 >gi|15892961|ref|NP_360675.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] gi|21362545|sp|Q92GT4|FPG_RICCN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|15620156|gb|AAL03576.1| formamidopyrimidine-DNA glycosidase [Rickettsia conorii str. Malish 7] Length = 273 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 161/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + T I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATETLNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + L LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKE-FLNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + +L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNNLRD------DEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|88705463|ref|ZP_01103174.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88700553|gb|EAQ97661.1| Formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 270 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + VT + L LR+ G++I+ + RRAKYL Sbjct: 1 MPELPEVETTRRGLRAHCEGRCVTAVVLRDTRLRWPVTPLLPEILNGQRILKLERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +E +++VHLGMSGS + KP +H+H+ I L + + YNDPR Sbjct: 61 LFRMERG-TLLVHLGMSGSLRV----LLKPQPAAKHDHIDIELESGAVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + PL LGPEP ++F L + +K +++ V G+ Sbjct: 111 RFGSFQWFVAGEE--FTPLSRLGPEPLSDAFGGKRLFELSRGRKVAVKPFIMDGATVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + +L + I++VL +AID GG++LRD+V Sbjct: 169 GNIYASEALYLAGIRPDRAAQRVSLAR------YQRLSEHIKQVLTNAIDQGGTTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF VYG++GEPC CG+++R V R++ YC CQ+ Sbjct: 223 GGDGKPGYFAQQLFVYGRSGEPC-KGCGRVLRDKVIGQRASVYCIACQR 270 >gi|71901945|ref|ZP_00683998.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] gi|71728286|gb|EAO30464.1| Formamidopyrimidine-DNA glycolase [Xylella fastidiosa Ann-1] Length = 271 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 160/288 (55%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R L+ + N + + L R+ LR++ P H + G +I V RRAKYL Sbjct: 1 MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWNIPSHIESRLPGHRITTVCRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ S+I+HLGMSG+ + A H+HV I L N + +NDPR Sbjct: 61 LIDTNAGGSLIIHLGMSGTLRL----LAPETPLRPHDHVDIMLNNRRVLR-----FNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + E +P L+ LG EP +SFN YL +N ++K L++Q+IV G+ Sbjct: 112 RFGCLLWQEDGQI--HPLLQRLGCEPLSDSFNGDYLYQCSRARNVSVKTLLMDQRIVVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA +SP L + + +L + ++ +L+ AI+ GG++LRD++ Sbjct: 170 GNIYAAESLFRAGISP------LCEADKISLQRYRRLAEVVKDILLYAINRGGTTLRDFL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ VYG+ +PC CG ++R+ R+T +C +CQ Sbjct: 224 SPDGRPGYFKQELFVYGRQQQPC-KQCGSLLRQTTIRQRTTVWCGHCQ 270 >gi|294338795|emb|CAZ87129.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Thiomonas sp. 3As] Length = 291 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 148/296 (50%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L + +T + L + LR+ G +I + RR KYL Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLGKP-LRWPLNID-PQTLVGLRIKALERRGKYL 58 Query: 61 LIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ L +IVHLGMSGS + A P H HV T + Sbjct: 59 LLRLSQTAAAPNTAGVLIVHLGMSGSLRWTPAAQA-PAPLSPHEHV------EWLTDRGV 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + ++P LR LGPEP F+ L + + +K LL+ Sbjct: 112 LRLRDPRRFGAVLWHAGDEVQRHPLLRVLGPEPLGADFDGATLCRALAGRKAAIKPLLLS 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAGIGNIY CEAL+RA++ P L +L +++ L A+ GG Sbjct: 172 QHIVAGIGNIYACEALFRAQIDPRTPASHLRPV------HCDRLAAAVRETLRQAVALGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C CQK Sbjct: 226 SSLRDFAHSDGELGYFQMQALVYGRAGQPC-RVCATPIRQIVQGQRSTYFCPKCQK 280 >gi|9971915|gb|AAG10477.1|AF279106_39 predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC31A08] Length = 270 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + K + + +H +NLR+ F + + + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIKKF-KGSLLKEARIHNRNLRWKVVDSFETSVKDQVVESLERRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L + II+HLGMSGS I + I +H+H+ + R+IYNDPR Sbjct: 60 IFKLSNDKKIILHLGMSGSLRIAKNNENFFI---KHDHIELIFDEE------RIIYNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L TS ++ ++ LGPEP +FNA +N+K+ L+NQK V GI Sbjct: 111 RFGSMHL--TSDIDKHKLIKNLGPEPLSKNFNAKDFFSGCSHSKTNIKSYLMNQKNVVGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P++ L D +L+ +K+L AI+ GG++L+D+ Sbjct: 169 GNIYASESLFLAKIHPLKNANELD------LDACKRLVAAGKKILEQAIEVGGTTLKDFY 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ GEPC C I + + R+TF+C CQ Sbjct: 223 SADGSPGYFKFKLNVYGREGEPCNK-CKGTICKTIVNQRATFFCEACQ 269 >gi|258652106|ref|YP_003201262.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] gi|258555331|gb|ACV78273.1| formamidopyrimidine-DNA glycosylase [Nakamurella multipartita DSM 44233] Length = 285 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 16/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L+ + + + +H P F A G+ + DV RR Sbjct: 1 MPELPEVETVRRGLLTHLAGRRIRTVRVHHDRAVRRHPGGPDDFQAVLAGRLVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++ HLGMSG F + A PI P H H+ I + + + Sbjct: 61 KYLWWALDDGDAVLAHLGMSGQFRV--AGPAGPIPEPLHPHLRIRFDFDD--AGPSLDFL 116 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M + + + +P D F+A K + +K ALL+Q +V Sbjct: 117 DQRTFGGMTYAPGGAEL-PAAIAHIARDPLDPEFSAAGAVAALRHKRTGIKRALLDQTVV 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R T L + ++ +V+ DA+ GG+S Sbjct: 176 SGVGNIYADEALWRARMHFDRPTERLTRPQA------ATVLAAATEVMTDALAVGGTSFD 229 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + +VYG+ PC CG IRR RS+++C CQ+ Sbjct: 230 ALYVNVNGESGYFDRSLNVYGRADRPC-PRCGTPIRRSAFMNRSSYWCPRCQR 281 >gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] gi|90101299|sp|Q3ABL4|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] Length = 263 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 149/290 (51%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+R L + T+ + ++ + + F+ GK+I+ + RR KY Sbjct: 1 MPELPEVETIKRTLAPKILGKTIYRVEVYLPKIIKNVSVEEFTRRVVGKEIVALKRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LLI+L G ++ VHL M+G +I K +H H L + + +ND Sbjct: 61 LLIDLSGKETVTVHLRMTGKLLILPKGSPKD----KHTHAIFDLGD------LELHFNDI 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG ++ P +GPEP ++ F YL + NLK LL+QKI+AG Sbjct: 111 RQFG-------GFSFEMP---EIGPEPLEDEFTPEYLKTKLKASQKNLKAVLLDQKIIAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A LSP R SL ++ +L + I+K+L I+ G+S+RDY Sbjct: 161 IGNIYADEILFEAGLSPKRIAASLSEDEA------EELFKAIRKILALGIEYRGTSIRDY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G FQ VYGK G C+ C ++ R AGRST YC +CQK Sbjct: 215 VDAENQQGSFQRLLKVYGKNGSLCV-RCNNVLIRERHAGRSTHYCPHCQK 263 >gi|187927361|ref|YP_001897848.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|309779938|ref|ZP_07674692.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] gi|229541081|sp|B2UES0|FPG_RALPJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|187724251|gb|ACD25416.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12J] gi|308921297|gb|EFP66940.1| DNA-formamidopyrimidine glycosylase [Ralstonia sp. 5_7_47FAA] Length = 291 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 143/303 (47%), Gaps = 26/303 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLLPHITGRRIVRAVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIEL------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LIE +++HLGM+G+ + T P+ H+HV I L T Sbjct: 61 LIECVPEVEQSGRAADTVGGWLLIHLGMTGTLRVLET----PVPPGLHDHVDIELAGATG 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + Y DPRRFG + ++P LR LG EP D F+ ++ + + Sbjct: 117 -VHVTLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL IV G+GNIY E+L+RA + P + + L I+ L Sbjct: 176 IKSALLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPR------YAALADAIRATLA 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DAI GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTF C Sbjct: 230 DAIARGGSTLRDFVGSDGQSGYFQLEAFVYDRAGLPC-RACGTPIRQIVQGQRSTFCCPT 288 Query: 287 CQK 289 CQ+ Sbjct: 289 CQR 291 >gi|90415302|ref|ZP_01223236.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] gi|90332625|gb|EAS47795.1| formamidopyrimidine-DNA glycosylase [marine gamma proteobacterium HTCC2207] Length = 268 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 155/289 (53%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + + ++ +LR+ S T+G+ ++ ++RRAKYL Sbjct: 1 MPELPEVETTLRGVAPHIVDQVIDQLRVYNGSLRWPVTQGISELTQGQLVVAITRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ELE ++++HLGMSGS + S + +H+H+ + + N + Y+DPR Sbjct: 61 LVELERG-TMMIHLGMSGSLRLVDRSEPR----RKHDHIEMLMANGACLR-----YHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG ++ YP L LGPEP + F L K+ +K +++ + V G+ Sbjct: 111 RFGAWLWSDSG----YPQLDHLGPEPLTDDFTGKRLFELSRKRKMAIKPFIMDNRTVVGV 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+R + P R + +L I++VL AI GG++LRD+V Sbjct: 167 GNIYASEALFRGGIRPDRAAGRVS------LQRYEELAGHIKEVLASAITQGGTTLRDFV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ VYG+ GEPC+ C + ++ I RS+ +C CQ+ Sbjct: 221 NGNGEPGYFQQTLMVYGRGGEPCVH-CDKPLKDIRLGQRSSVFCPACQR 268 >gi|312963651|ref|ZP_07778132.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] gi|311282160|gb|EFQ60760.1| Formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens WH6] Length = 270 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + T + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVETG----MPAAKHEHVDIELESG-----LSLRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SQDPHNHELLIRLGPEPLTDLFDGERLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRGR------YLKLAVEIKRILAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQ 269 >gi|229593163|ref|YP_002875282.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] gi|259647147|sp|C3K3N6|FPG_PSEFS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|229365029|emb|CAY53194.1| formamidopyrimidine-DNA glycosylase [Pseudomonas fluorescens SBW25] Length = 270 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 148/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVGLPAA----KHEHVDIELESG-----MALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP F+ L K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SQDPHNHELLLRLGPEPLTELFDGDRLFQLSRGKSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRGR------YLKLAIEIKRVLAAAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ GE C CG +R +V R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGEAC-KVCGTELRNVVLGQRASVFCPRCQR 270 >gi|21730465|pdb|1KFV|A Chain A, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna. gi|21730466|pdb|1KFV|B Chain B, Crystal Structure Of Lactococcus Lactis Formamido- Pyrimidine Dna Glycosylase (Alias Fpg Or Mutm) Non Covalently Bound To An Ap Site Containing Dna Length = 271 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 99/287 (34%), Positives = 141/287 (49%), Gaps = 18/287 (6%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 ELPEVE +RR L + + I GK I +SRR KYL+ Sbjct: 2 ELPEVETVRRELEKRIVGQKIISIEATYPRXVLTGFEQLKKELTGKTIQGISRRGKYLIF 61 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 E+ + +I HL G + + + +H+H+T + ++IY D R+F Sbjct: 62 EIGDDFRLISHLRXEGKYRLATLDAPR----EKHDHLTXKFADG------QLIYADVRKF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G +L+ T Y + +GPEP F+ + K +K LL Q +VAG+GN Sbjct: 112 GTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGN 171 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IYV E LW AK+ P ++T LI+++ ++ L I ++L AI GGSS+R Y Sbjct: 172 IYVDEVLWLAKIHPEKETNQLIESS------IHLLHDSIIEILQKAIKLGGSSIRTY-SA 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS G QN VYGKTGE C S CG I++I AGR T +C CQ+ Sbjct: 225 LGSTGKXQNELQVYGKTGEKC-SRCGAEIQKIKVAGRGTHFCPVCQQ 270 >gi|254426970|ref|ZP_05040677.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] gi|196193139|gb|EDX88098.1| formamidopyrimidine-DNA glycosylase [Alcanivorax sp. DG881] Length = 269 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ +T + + LR+ A R ++ + RRAKYL Sbjct: 1 MPELPEVETTLRGIRPHVQGRILTSVTVREPRLRWPVSEALYA-LRDCPVVALRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE +I HLGMSG+ + + +H+HV + L + + +NDPR Sbjct: 60 LIELEHGQVLI-HLGMSGTLRVVDATLPL----RKHDHVDLLLDSGK-----ALRFNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + + L++LGPEP +FN + + + +K+ +++ V G+ Sbjct: 110 RFGTVLF--QAGEEPHSLLQSLGPEPLSEAFNGERMFARSRGRKVAVKSFIMDNATVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R + L + I+ VL AI+AGG++L+D+ Sbjct: 168 GNIYAQESLFMAGIHPSRAAGRISLAR------YQALAEAIKVVLARAIEAGGTTLKDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYF + +VYG+ G+PCL C +++ RST YC CQ+ Sbjct: 222 RADGQPGYFAQSLNVYGRAGQPCL-QCEAILKADRHGQRSTAYCPQCQR 269 >gi|170719527|ref|YP_001747215.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] gi|229541079|sp|B1J2M4|FPG_PSEPW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169757530|gb|ACA70846.1| formamidopyrimidine-DNA glycosylase [Pseudomonas putida W619] Length = 270 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRILSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVQLGLPAA----KHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + L LGPEP + F+ L + +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPL--NHELLLRLGPEPLTDLFDGERLFQLSRGRTMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRTR------YLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G PC CG +R R++ YC CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGMPC-KLCGTTLREAKLGQRASVYCPRCQR 270 >gi|6016043|sp|P95744|FPG_SYNEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1781316|emb|CAA71333.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus] Length = 284 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 137/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ + R P F R ++I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRRIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T P H V + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTT----PQPPCPHTRVRWFFP-----TRAELRFVD 111 Query: 119 PRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTLTPEQ------VQRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|56476195|ref|YP_157784.1| formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] gi|81677551|sp|Q5P728|FPG_AZOSE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56312238|emb|CAI06883.1| Formamidopyrimidine-DNA glycosylase [Aromatoleum aromaticum EbN1] Length = 271 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R + ++ T+T + + LR P + G+++ V RRAKYL Sbjct: 1 MPELPEVEITCRGIRPLVAGRTLTALEVRNPRLRQPVPADLAQTLVGERLQGVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ ++ HLGMSGS + + H+HV + + DPR Sbjct: 61 LLDFPHGSVLV-HLGMSGSLRVVSADEPAGV----HDHVDLVF------GAEALRLRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L +P L LG EP + F +L ++K L++ V G+ Sbjct: 110 RFGLV-LWHAGDGLSHPLLAALGREPLERGFTGAWLHEATRGVRLSIKQTLMDAHRVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++ P+ ++ L +L+ +++ L+ AIDAGGS+LRD+V Sbjct: 169 GNIYASESLFRARIHPLAPAGAIGPQR------LARLVASVRETLLAAIDAGGSTLRDFV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ + VYG+ G C C +RR+V RSTF+C CQ+ Sbjct: 223 GGDGRAGYFQQQYFVYGREGLAC-RVCATPVRRVVIGQRSTFFCPRCQR 270 >gi|300705247|ref|YP_003746850.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] gi|299072911|emb|CBJ44267.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Ralstonia solanacearum CFBP2957] Length = 288 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 147/300 (49%), Gaps = 23/300 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVSRVLRRGKYL 60 Query: 61 LIELEGN---------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 LIE + ++VHLGM+G+ + P+ H+H+ I L + + Sbjct: 61 LIECVPDAAREPRAVAGWLLVHLGMTGTLRV----LEVPVAPGAHDHLDIELADAAG-RP 115 Query: 112 YRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + Y DPRRFG + ++P LR LG EP D F+ ++ + +++ +K Sbjct: 116 ITLRYRDPRRFGAVLWHAGDEAGLSEHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKT 175 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL IV G+GNIY E+L+RA + P + + L + I+ L DAI Sbjct: 176 VLLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRIGRPR------YAALAEAIRATLADAI 229 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+LRD+V DG GYFQ VY + G PC CG IR+IVQ RSTFYC CQ+ Sbjct: 230 ARGGSTLRDFVGSDGQSGYFQLDALVYDRAGLPC-RVCGTPIRQIVQGQRSTFYCPVCQR 288 >gi|94676562|ref|YP_588638.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166215610|sp|Q1LTS6|FPG_BAUCH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|94219712|gb|ABF13871.1| formamidopyrimidine-DNA glycosylase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 269 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEIIRR + + + + LR+ + +++I + RRAKYL Sbjct: 1 MPELPEVEIIRRGIEPWVVGHIIQRAEIRNNQLRWPIDQEIIS-IHQRRVISLKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L II+H GMSG I A + +H+H+ + ++NN + Y DPR Sbjct: 60 LMQLHHG-WIIIHFGMSGRLRI----LAHMLPPEKHDHIDLIMSNNCILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + L LG EP + F+ +L + K+ +K L+ K+V GI Sbjct: 110 RFGA--WLWSNNLDKMSILNNLGVEPLSDQFDGHWLFTKSRNKSLLIKQFLMTNKLVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + SL + L + I+ +L+ +I+ GG++LRD++ Sbjct: 168 GNIYANEALFAAGILPSRASCSLKEQEAL------LLARSIKAILLSSIEEGGTTLRDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G F VYG+ GEPC + CG+ I+ RS+F+C CQ Sbjct: 222 QSDGRDGLFAKKLQVYGRHGEPCYT-CGEFIQIAKYGQRSSFFCPSCQ 268 >gi|169632504|ref|YP_001706240.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii SDF] gi|229464467|sp|B0VRV3|FPG_ACIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169151296|emb|CAO99994.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii] Length = 274 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E E + ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPR Sbjct: 59 LAEFEQDQ-MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPR 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + Q + TLGPEP F+A YL + K+ +K AL++ +V G+ Sbjct: 108 RFGCILWLNP--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P + L + KL+ EI+++L AID GGS+LRDY Sbjct: 166 GNIYATESLFNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYS 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G GYFQ YG+ E C+ NC + + R++ +C CQ Sbjct: 220 NAMGENGYFQQTLLAYGRAREMCV-NCETTLENLKLGQRASVFCPQCQ 266 >gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] Length = 285 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPE+PEVE +RR L ++ V+ + + + F G+++ V R K Sbjct: 2 MPEMPEVETVRRGLEEIVIGKIVSSVTVTWPRIIQAEGGVEAFETRMPGQQLEKVGRVGK 61 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL ++ I HL M G ++ E T Q+ HV LT+ + + Y D Sbjct: 62 FLLFYWT-EVTWIAHLRMEGKYLYESTESPVD----QYTHVICHLTDGHDLR-----YRD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + +VE + LGPEP D +F+ YL +F K ++K LL+Q ++A Sbjct: 112 VRKFGRIHMVEKADTEAEIAKLKLGPEPNDLTFD--YLQKRFDKTTRSIKAVLLDQGVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ AK+ P + RSL + +I E ++++ AI+ GG+++R Sbjct: 170 GIGNIYADEILFAAKIHPEQSARSLYDEE------IQAIITESRRIMASAIEVGGTTIRT 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G F + YGK G+PC CG I +I A R T +C YCQ+ Sbjct: 224 YTNTFGENGQFADYLKAYGKKGQPC-PRCGTEIEKISVAKRGTHFCPYCQR 273 >gi|58696959|ref|ZP_00372449.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225630828|ref|YP_002727619.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] gi|254789456|sp|C0R4I6|FPG_WOLWR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58536803|gb|EAL60033.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila simulans] gi|225592809|gb|ACN95828.1| formamidopyrimidine-DNA glycosylase [Wolbachia sp. wRi] Length = 271 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 166/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I A+ +H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSMAVIIHLGMSGKLIYAEHDQAQN----KHDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + G EP + F+ YL K +N+K+AL++ K++ G+ Sbjct: 112 RFGLVIVLNKEQEIN--FFDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|190571281|ref|YP_001975639.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018676|ref|ZP_03334484.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238066647|sp|B3CM71|FPG_WOLPP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|190357553|emb|CAQ54990.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995627|gb|EEB56267.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 271 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 166/288 (57%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L +KN ++++ ++ NLR + +GK I D+ RR KY+ Sbjct: 1 MPELPEVEVISNFLFDKIKNKKISNVTVNNWNLRVPITKNIDDLLKGKVINDIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++++I+HLGMSG I + A+ +H+HV ++NT+ +I+NDPR Sbjct: 61 ISNIDASMAVIIHLGMSGKLIYVEDNQAQN----KHDHVIFLFSDNTS-----LIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + LG EP + F+ YL + +N+K+ L+N K++ G+ Sbjct: 112 RFGLVIVLNREQELN--FFNNLGIEPLTDEFDGHYLQKLLKNRKANIKSVLMNNKLIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R + L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRLAQDLTYIE------CEKLAIEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-RICNNIITLIRQNGRSTYFCNACQ 270 >gi|307546413|ref|YP_003898892.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] gi|307218437|emb|CBV43707.1| formamidopyrimidine-DNA glycosylase [Halomonas elongata DSM 2581] Length = 305 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + ++ + + LR P + G + + RRAKYL Sbjct: 32 MPELPEVETTRRGIAPHVEAREIREVIVRQSRLRHPVPEDLADRLVGAHLGRLDRRAKYL 91 Query: 61 LIEL--EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L+ + E +++ HLGMSGS I +H+HV + L + + Y+D Sbjct: 92 LMPVVGERGGTLLCHLGMSGSLRIARLGEL----PKKHDHVDLVLDDGAILR-----YHD 142 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFGF+D ++ + L LGPEP +F+ L K+ +K L++ +V Sbjct: 143 PRRFGFIDWLD-GDVARDRRLAKLGPEPLSEAFDGERLYAMSRKRRLAVKPFLMDNAVVV 201 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A + P R+ + + T +L + I++VL AI GG++LRD Sbjct: 202 GVGNIYAAEALFLAGIDPRREAGRISRERYT------RLAEAIREVLAAAITQGGTTLRD 255 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +V G GYF +VYG+ GEPC CG +R + R++ +C CQ+ Sbjct: 256 FVSGTGEPGYFAQRLNVYGRDGEPC-RRCGAELRLVTLGQRASVFCAACQR 305 >gi|238650997|ref|YP_002916853.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] gi|259647150|sp|C4K2K4|FPG_RICPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|238625095|gb|ACR47801.1| formamidopyrimidine-DNA glycosylase [Rickettsia peacockii str. Rustic] Length = 273 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGM+G F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMNGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L + LG EP + YL + K +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEKE-FFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGNDLRD------DEIENLIKAIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ CLS C I +I +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTKQLKVYGREGQSCLS-CSSTIIKIKHSGRSTFYCKTCQ 271 >gi|22299109|ref|NP_682356.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] gi|24636849|sp|P59065|FPG_THEEB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|22295291|dbj|BAC09118.1| formamidopyrimidine-DNA glycosylase [Thermosynechococcus elongatus BP-1] Length = 284 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 136/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +V + D+ + R P F R + I RR K Sbjct: 1 MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRAIEQWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ +++HL MSG + T P H V + + + D Sbjct: 61 YLLATLDDGSRLVIHLRMSGQLLWLTT----PQPPCPHTRVRWFFP-----TRAELRFVD 111 Query: 119 PRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + P L TL PEP +F +L + ++K ALL+Q I Sbjct: 112 QRTFGRCWWLPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY E+L+ + L P + +L + +L I +VL + I AGG+++ Sbjct: 172 VAGMGNIYADESLFLSGLHPTQSAHTLTPEQ------VQRLHGVICQVLREGIAAGGTTI 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 R ++ G G++ VYG+ GE C CG I R+ AGRS+ YC CQ Sbjct: 226 RTFMSPAGVNGHYGGQAWVYGRKGEAC-RVCGTTIERLRLAGRSSHYCPQCQ 276 >gi|109896382|ref|YP_659637.1| formamidopyrimidine-DNA glycosylase [Pseudoalteromonas atlantica T6c] gi|123361457|sp|Q15ZV5|FPG_PSEA6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|109698663|gb|ABG38583.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pseudoalteromonas atlantica T6c] Length = 270 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 143/289 (49%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + I + K LR+ P G K+ DV RRAKYL Sbjct: 1 MPELPEVEVSRLGISPHLIGQHIEQIIVRHKQLRWWVPDD-VHLAEGHKVNDVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ + SII+HLGMSG I ++ +H+H+ I LTN + +ND R Sbjct: 60 FIDTDAG-SIILHLGMSGKLRIVNSETPVI----KHDHIDIVLTNGVCLR-----FNDAR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + LGPEP + F+ L KN +KN +++ K+V G+ Sbjct: 110 RFGACLWQRVGDP-EIGMIAALGPEPLTSDFDGQRLYDLSRTKNVPVKNFIMDNKVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P K L I++VL AI+ GG++L+D+ Sbjct: 169 GNIYANESLFIAGIDPR------KAAKKVSKKSYLALGDIIKQVLAKAIEQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG+ GYF VYG+ G+ C C I+ + R+TF+C CQK Sbjct: 223 QADGNPGYFAQHLRVYGRKGQAC-EVCESEIQSVTLGQRNTFFCEQCQK 270 >gi|293607619|ref|ZP_06689953.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] gi|292814052|gb|EFF73199.1| DNA-formamidopyrimidine glycosylase [Achromobacter piechaudii ATCC 43553] Length = 275 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 144/292 (49%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + +H +R+ P A G+ +++ +RR KYL Sbjct: 1 MPELPEVETTRRGIDAVITGRTLKRLVIHEARMRWPIPTDLPALIGGRDVLECARRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E IVHLGMSGS S A +H+HV N + +DPR Sbjct: 61 LLRFEHGTQ-IVHLGMSGSLR----SVAPGEFLRKHDHVEWIFENAV------LRLHDPR 109 Query: 121 RFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L F + +K LL V Sbjct: 110 RFGAVLWHADADGPIDAHPLLAKLGIEPFDPRFDGAWLHRHFKNHGAAIKQVLLAGMAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA+++P L +L ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASESLFRARINPKTPANKLSLAR------CERLADMVRATLADALTSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G+PC C IRR VQ R+T+YC CQ+ Sbjct: 224 YVGATGEPGAYFDIHAAVYEREGKPC-RVCETPIRRFVQGQRATYYCPKCQR 274 >gi|284047823|ref|YP_003398162.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] gi|283952044|gb|ADB46847.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] Length = 273 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L+ + T+ + + K + P F+ +G + V RR KY Sbjct: 1 MPELPEVEQVRISLLPHIVGKTIEKVRVDLPKMILHPDPDAFARRLQGARFTGVRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +ELEG ++VHL M+G+ + + K + P + + L+ N + + D Sbjct: 61 LGLELEGGDWLLVHLRMTGALL----ALPKDQQEPPYTRMAFFLSGREN-----LYFTDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG LV ++ +LGPEP + + A YL + K + +K +L+Q ++AG Sbjct: 112 RTFGVAALV-GEDGWRDKGYESLGPEPLEPALTAEYLRARAKGKTTVVKGFILDQSVIAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P R+ L + L ++ V+ ++ G++ R+Y Sbjct: 171 LGNIYADEALFAAGIRPTRRVNRLTRKE------WEALTLGVRAVIHQGLEHHGTTFRNY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +G VY + G PC CG ++++I AGR + YC +CQK Sbjct: 225 QDADGKMGDNSRYLQVYHRKGLPC-RRCGTLLKQIKVAGRGSVYCPHCQK 273 >gi|296112372|ref|YP_003626310.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|295920066|gb|ADG60417.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis RH4] gi|326571870|gb|EGE21875.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC8] Length = 302 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L++ ++++HLGMSGS + +H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPR-----KHDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYP-----PLRTLGPEPADNSFNAIYLTHQFHKKNSN---- 166 Y+DPRRFG + V P L LGPEP F+A YL + S+ Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 167 ---LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|330812395|ref|YP_004356857.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380503|gb|AEA71853.1| formamidopyrimidine-DNA glycosylase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVEVG----MPAAKHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPFNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRRAAGGISRAR------YLKLAIEIKRILAHAIERGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYFQ VYG+ GE C CG +R I R++ +C CQ Sbjct: 223 GGDGQPGYFQQELFVYGRGGELC-KVCGTGLREIRLGQRASVWCPRCQ 269 >gi|94265145|ref|ZP_01288909.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|94267032|ref|ZP_01290675.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452266|gb|EAT02912.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93454384|gb|EAT04685.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 343 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 55/333 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + +I +LR P G I V RRAKY Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDNIETSGLSLRRPVPLAALRELAVGAVITGVERRAKY 81 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS----------------- 102 LL+ L+ +++HLGM+G A +H+H+ I Sbjct: 82 LLLHLDNGALLVIHLGMTGKLY----PAATTEPPRKHDHLVIKMGTDLFFTSATPETTPG 137 Query: 103 -LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS-FNAIYLTHQF 160 L N + + V +ND RRFG + + + P L LGPEP D F A YL Sbjct: 138 MLVKNKSVPIFEVRFNDCRRFGLVAVYGSEEAVAPPLLVGLGPEPLDKRQFTAAYLHRCC 197 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ + +KN L++ ++V GIGNIY E L+ A +SP L + +L+ Sbjct: 198 RQRRTPIKNLLMDNRVVVGIGNIYANEILFAAGISPFAPAARLGRLRAG------RLVAA 251 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG------------ 268 +++L AI AGG+++ D+ + G GYFQ +VYG+ G PC C Sbjct: 252 ARQILTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPDDGADQPPAAG 310 Query: 269 ------------QMIRRIVQAGRSTFYCTYCQK 289 MI R +QAGR+TF+C CQK Sbjct: 311 ATAAKKVAKGAAPMIERRMQAGRATFFCPRCQK 343 >gi|157964829|ref|YP_001499653.1| formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] gi|166988463|sp|A8F2H0|FPG_RICM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157844605|gb|ABV85106.1| Formamidopyrimidine-DNA glycosidase [Rickettsia massiliae MTU5] Length = 279 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + V ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIVENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T L Q LG EP + YL + + +KN +++ +++ G+ Sbjct: 112 RFGMIYSFKTDLLEQE-FFNDLGIEPFSDLLTLEYLKDKLQTRKRPIKNLIMDNRVIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I+ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKSGSDLRD------DEIENLIKSIRDVLTKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYGK G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGKEGQSCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|187477042|ref|YP_785066.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] gi|123514466|sp|Q2KYB7|FPG_BORA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|115421628|emb|CAJ48138.1| formamidopyrimidine-DNA glycosylase [Bordetella avium 197N] Length = 275 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 141/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P + + ++ RR KYL Sbjct: 1 MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ E + IVHLGMSGS A +H+HV + + +DPR Sbjct: 61 LLRFEHGVQ-IVHLGMSGSLR----RVAMDEAPRKHDHVDWVFDHA------ILRLHDPR 109 Query: 121 RFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L F K +K ALL V Sbjct: 110 RFGAVLWHPNTDGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+RA + P L + +L Q ++ L DA+ +GGS+LRD Sbjct: 170 GVGNIYASECLFRAGIDPRTPAGKLSRPR------CERLAQAVRATLADALASGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G C CG IRR+VQ R+T++C +CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLAC-RVCGTPIRRLVQGQRATYFCPHCQK 274 >gi|326561880|gb|EGE12215.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 7169] Length = 302 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 153/305 (50%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L++ ++++HLGMSGS + +H+HV I N ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPR-----KHDHVLIDFAN-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYP-----PLRTLGPEPADNSFNAIYLTHQFHKKNSN---- 166 Y+DPRRFG + V P L LGPEP F+A YL + S+ Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 167 ---LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|312898330|ref|ZP_07757720.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] gi|310620249|gb|EFQ03819.1| formamidopyrimidine-DNA glycosylase [Megasphaera micronuciformis F0359] Length = 273 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L V+ T+T I + L + FS A G V R+ KY Sbjct: 1 MPELPEVETVRATLEPVLTGRTITHIDITLPRLIKNATVEAFSKALSGCTFTAVGRKGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + +G+ ++VHL M+GS I + + P+ H+ L + Y D Sbjct: 61 LRLCTDGSSDLLVHLRMTGSLIYDAAGNNR----PKTAHIVFHLDKG------LLYYCDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L + K LGP+ ++ A YL + + +K+ LL+Q ++AG Sbjct: 111 RTFGCLWLAKPGEKTGISGYDDLGPDANSSAVTADYLREKMKASSRTVKSFLLDQTVLAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P R+ + K+ +L + I VL + I+ GG+++RD+ Sbjct: 171 LGNIYVDEALFLAGIRPSRRCNHIG------KERTQRLAKAIHTVLAEGIEYGGTTIRDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ G G Q +VYG+ G PC + CG +I+ + Q GR T YC +CQ Sbjct: 225 VNGSGREGENQENLAVYGREGTPCKT-CGTLIKYVKQGGRGTHYCPHCQ 272 >gi|254430782|ref|ZP_05044485.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] gi|197625235|gb|EDY37794.1| formamidopyrimidine-DNA glycosylase [Cyanobium sp. PCC 7001] Length = 282 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 145/297 (48%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + +HR D P F+AA +G + RR K Sbjct: 1 MPELPEVETVRRGLEQRTQGFAIARVQVHRPRAVASPDDPEAFAAALQGCTVQHWRRRGK 60 Query: 59 YLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YL+ +L+ VHL M+G F+ P + H V + N + Sbjct: 61 YLISQLQRGDGRDGGHWGVHLRMTGQFLW----LEAPRPSCAHTRVQL-----WNDQGQE 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG M + + LR LGPEP +F A YL + + + +KNAL Sbjct: 112 LRFVDTRSFGQMWWIPPGEPPEMVMGGLRHLGPEPLGPAFTASYLEGRLNGSSRPIKNAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY E+L+ A + P L + L +L++ + +VL +I A Sbjct: 172 LDQAVVAGVGNIYADESLFAAGIRPHTPAGQLRPHQ------LDRLVKALVEVLEISIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G+ G + VY + GEPC CG I+R AGRS+ +C CQ Sbjct: 226 GGTTFSDFRDLTGTNGNYGGVALVYRRGGEPC-RRCGTPIQRHKLAGRSSHWCPNCQ 281 >gi|104779568|ref|YP_606066.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] gi|166198732|sp|Q1IGF3|FPG_PSEE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|95108555|emb|CAK13249.1| formamidopyrimidine-DNA glycosylase [Pseudomonas entomophila L48] Length = 270 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + V+ + + + LR+ P G+ I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLVGQRVSRVVVRDRRLRWPIPEDLDVRLSGQCIVSVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LINAEVG-TLISHLGMSGNLRLVELGLPAA----KHEHVDIELESGLMLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M L + L LGPEP + F+ L ++ +K +++ +V G+ Sbjct: 111 RFGAMLWSLDPL--NHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI++VL AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGISRAR------YLKLAIEIKRVLAAAIEQGGTTLRDFI 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYG+ G+PC CG +R + R++ +C CQ+ Sbjct: 223 GGDGQPGYFQQELFVYGRGGQPC-KVCGTELREVKLGQRASVFCPKCQR 270 >gi|326563315|gb|EGE13582.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 46P47B1] gi|326563430|gb|EGE13695.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 12P80B1] gi|326565969|gb|EGE16130.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 103P14B1] gi|326568897|gb|EGE18966.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC1] gi|326575382|gb|EGE25307.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis 101P30B1] gi|326576529|gb|EGE26437.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis CO72] gi|326578000|gb|EGE27864.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis O35E] Length = 302 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVRHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L++ ++++HLGMSGS + +H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPR-----KHDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYP-----PLRTLGPEPADNSFNAIYLTHQFHKKNSN---- 166 Y+DPRRFG + V P L LGPEP F+A YL + S+ Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 167 ---LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|296134842|ref|YP_003642084.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] gi|295794964|gb|ADG29754.1| formamidopyrimidine-DNA glycosylase [Thiomonas intermedia K12] Length = 291 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 145/296 (48%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ L + +T + L + LR+ G +I + RR KYL Sbjct: 1 MPELPEVEVTRQGLEPALLGARLTGLRLGKP-LRWPLNID-PQTLVGLRIKALERRGKYL 58 Query: 61 LIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L+ L +IVHLGMSGS P H HV T + Sbjct: 59 LLRLSQTAASPNTAGVLIVHLGMSGSLRWTPA-AQVPAPLSPHEHV------EWLTDRGV 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + DPRRFG + ++P LR LGPEP F L + + +K LL+ Sbjct: 112 LRLRDPRRFGAVLWHAGEEVQRHPLLRVLGPEPLGADFKGATLCRALAGRKAAIKPLLLS 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q IVAGIGNIY CEAL+RA++ P L +L +++ L A+ GG Sbjct: 172 QHIVAGIGNIYACEALFRARIDPRTPASHLRPV------HCDRLAAAVRETLQQAVALGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SSLRD+ H DG +GYFQ VYG+ G+PC C IR+IVQ RST++C CQK Sbjct: 226 SSLRDFAHSDGELGYFQMQALVYGRVGQPC-RVCATPIRQIVQGQRSTYFCPKCQK 280 >gi|323143805|ref|ZP_08078472.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] gi|322416397|gb|EFY07064.1| DNA-formamidopyrimidine glycosylase [Succinatimonas hippei YIT 12066] Length = 272 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + +K+ + + K LR +G K++ + RR KY+ Sbjct: 1 MPELPEVEVTMRGVSPALKDSVIKSVFKGEKKLRIPLSDDLYQ-LQGAKVLSLQRRGKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ SIIVHLGMSG + + H+H ++L N + V NDPR Sbjct: 60 IVTTTKG-SIIVHLGMSGHLKVVDHEAPFIL----HDHFALALDNGKD-----VRLNDPR 109 Query: 121 RFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V E + L+ LGPEP ++FNA YL + K++ +K A+++ K+V G Sbjct: 110 RFGLVAYVKEGNDPLASEVLKNLGPEPFSDAFNADYLYNTLKKRHIAVKQAIMDSKVVVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A++SP+R ++ + KL++ I+K+L ++I GG+++RD+ Sbjct: 170 VGNIYASESLFLAEISPLRSASTITREE------CEKLVEVIRKLLHESIKKGGTTIRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF +VYG GE C CG I VQ R T++C +CQ Sbjct: 224 SGADGKPGYFVQNLNVYGHEGEKC-PRCGHPILGTVQGQRHTYFCGHCQ 271 >gi|33594050|ref|NP_881694.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|161609281|ref|NP_887446.2| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] gi|39931242|sp|Q7VUG7|FPG_BORPE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33564124|emb|CAE43396.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis Tohama I] gi|332383467|gb|AEE68314.1| formamidopyrimidine-DNA glycosylase [Bordetella pertussis CS] Length = 275 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 143/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS + +H+HV + + +DPR Sbjct: 61 LLRFDHGVQ-IVHLGMSGSLR----RVPEQEAPRKHDHVDWVFDHAV------LRLHDPR 109 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L F + +K ALL V Sbjct: 110 RFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + + +L I+ L DA+D+GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTAAQRVSAAR------CDRLAAAIRATLSDALDSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLPC-RVCGTPIRRLVQGQRATYFCPSCQK 274 >gi|326569197|gb|EGE19258.1| formamidopyrimidine-DNA glycosylase [Moraxella catarrhalis BC7] Length = 302 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ TVT + + LR+D + G + + RRAKYL Sbjct: 1 MPELPEVETTKLSLEPLI-GQTVTCVQVKHPRLRYDIAKDLDS-LVGFVLTKLQRRAKYL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L++ ++++HLGMSGS + +H+HV I + ++ K + Sbjct: 59 LLDFYHAHDSRQKTLLIHLGMSGSLQQHINEPPR-----KHDHVLIDFAD-SHGKIITLH 112 Query: 116 YNDPRRFGFMDLVETSLKYQYP-----PLRTLGPEPADNSFNAIYLTHQFHKKNSN---- 166 Y+DPRRFG + V P L LGPEP F+A YL + S+ Sbjct: 113 YHDPRRFGMILWVVNDDYIDQPNTYARFLAHLGPEPLSEDFDANYLIRYIMRPKSHQKPL 172 Query: 167 ---LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K+ +++Q +V G+GNIY E+L+ + + P+ +D L +L I++ Sbjct: 173 NKPIKSLIMDQSVVVGVGNIYAAESLFLSGIHPLTPAY------LVHEDKLVRLTHHIKQ 226 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L AI GGS+LRD+ G GYFQ VYG+ GE C + CG ++ I +GR++ Y Sbjct: 227 ILARAITQGGSTLRDFTVGSGKTGYFQQTLLVYGRQGESCAT-CGSLLENIKISGRASVY 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPNCQ 290 >gi|296533913|ref|ZP_06896439.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] gi|296265767|gb|EFH11866.1| DNA-(apurinic or apyrimidinic site) lyase [Roseomonas cervicalis ATCC 49957] Length = 280 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 120/293 (40%), Positives = 167/293 (56%), Gaps = 17/293 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ T+T +R+ +R+ FP +A G ++ RR KY+ Sbjct: 1 MPELPEVETVMRGLSRLLLGRTLTLAATNREGMRWPFPPGLAARLTGARVESFRRRGKYM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G S+++HLGMSG + P P H H+ + + RV + DPR Sbjct: 61 LMRLSGGDSVLIHLGMSGRMVARPVGSNLP--PPPHEHLVMQTDDGQ-----RVGFADPR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +DLV T+ + + L +GPEP + F L K + +K ALL+Q++VAG+ Sbjct: 114 RFGSVDLVPTAAEDGHKLLAGMGPEPLEEGFTPGILASALTGKKTPIKAALLDQRVVAGL 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV EAL+RA LSP R ++ P KL+ I+ VL +AI+AGGSSLRDYV Sbjct: 174 GNIYVAEALFRAGLSPRRLAHTI------PGARAEKLVPAIKAVLEEAIEAGGSSLRDYV 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM----IRRIVQAGRSTFYCTYCQK 289 DG +G+FQ+ F VY + G PC G + RIVQ+GRSTFYC Q+ Sbjct: 228 QADGELGHFQDRFHVYDREGAPCPLCPGPPTCRGVSRIVQSGRSTFYCARTQR 280 >gi|218441992|ref|YP_002380321.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] gi|218174720|gb|ACK73453.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] Length = 277 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 136/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + + + L + F F G KI RR K Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLPRTLAYPFSIAEFWEGITGTKINLWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ + VHL M+G + + I P+H + + L + + + D Sbjct: 61 YLLALLDCGGYLGVHLRMTGQLLWVK----RDISYPKHTRLRLFLGEDQELR-----FVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + L+ LG EP +F+ YL H+ +K+ LL+Q++ Sbjct: 112 TRTFGKVWWIPPDQSPEKIITGLQKLGVEPFSQAFSVEYLQHKLKTSRRKIKSVLLDQEV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY EAL+++ + P SL L KL I VL +ID GG++ Sbjct: 172 VAGIGNIYADEALFKSGIRPDAIACSLTPQQ------LEKLRWAICDVLQTSIDKGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G G + VYG+ GE C CG I R+ GRS+ +C CQ Sbjct: 226 SDFLSVTGVNGNYGGVAWVYGRGGESC-RVCGTPIERVKLGGRSSHFCPSCQ 276 >gi|239947088|ref|ZP_04698841.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921364|gb|EER21388.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] Length = 273 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 160/288 (55%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ + I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSSLLATEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQ----SANYKTQKHDHVIFDLNNCE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL ++ + +KN +++ KI+ G+ Sbjct: 112 RFGMVYSFKTNFLEKE-FFNDLGIEPLSDSLTLEYLKNKLKIRKIPIKNLIMDNKIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L A++ P + L D + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLARIHPDKLGNDLND------DEIESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ G+ CLS C I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFIQQLTVYGREGQNCLS-CSSTIIKTKHSGRSTFYCKTCQ 271 >gi|78185409|ref|YP_377844.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9902] gi|78169703|gb|ABB26800.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9902] Length = 278 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 139/294 (47%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I + R HF A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVDHFVAGLKGATVGAWSRRGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ +LE N S VHL M+G F A P H V N + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQWH----ATPAAPCSHTRVRF-----WNQHNEELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGDDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LIAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LIRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPISREKLSGRSTHWCPSCQR 278 >gi|317968874|ref|ZP_07970264.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CB0205] Length = 294 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 140/295 (47%), Gaps = 24/295 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAKY 59 PELPEVE +RR L + T+ + + R P F +A +G + RR KY Sbjct: 11 PELPEVETVRRGLERQTRGFTIERVEVLRARAIAAPPVPAQFCSALQGCSVDQWMRRGKY 70 Query: 60 LLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L+ L E VHL M+G F+ T+ + H V N + + Sbjct: 71 LMASLKRSEEDAGHWGVHLRMTGQFLWMETA----KEPCSHTRVRF-----WNPEGQELR 121 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + L+ LGPEP +F Y+ + + +K ALL+ Sbjct: 122 FVDLRSFGEMWWVPPGKPLESVMTGLKRLGPEPFSAAFTPQYMRQKLKGSSRAIKTALLD 181 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY E+L+ + ++P + SL L +L + +VL +I AGG Sbjct: 182 QALVAGVGNIYADESLFMSGIAPEERAGSLKLKQ------LERLHSALVEVLTTSIGAGG 235 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G+ G + NA VY +TGEPC CG IRR GRS+ +C CQ Sbjct: 236 TTFSDFRDLSGTNGNYGNAAWVYRRTGEPC-RVCGTPIRRDKLGGRSSHWCPSCQ 289 >gi|306836416|ref|ZP_07469393.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304567697|gb|EFM43285.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR + + +T + + + GK+I V+RR K++ Sbjct: 1 MPELPEVESVRRGVESYVVGKEITSVDIAHPRANRGQDEPLAGLVVGKEIAAVARRGKFM 60 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I HT H +T+ L++ T Sbjct: 61 WLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHTDSP-------HRRITVVLSDATE----- 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ S + +G +P + F+ + KK + +K ALL+ Sbjct: 109 LHFVDQRTFGYWLYAPWST------ISHIGLDPLEPDFDIASAARRLRKKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A+ AGG Sbjct: 163 QTLVSGIGNIYADEALWTARISPRKKASALRQKDAV------ALLSAAQTVMSAALKAGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +CQ Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHCQ 271 >gi|99034656|ref|ZP_01314602.1| hypothetical protein Wendoof_01000584 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 349 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 163/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 79 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 138 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + +H+HV ++NT+ +I+NDPR Sbjct: 139 IWNTDGSVAVIIHLGMSGKLIYADHDQMRN----KHDHVVFLFSDNTS-----IIFNDPR 189 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + G EP + F+ YL K N+K+AL++ K + G+ Sbjct: 190 RFGLVIVLNKEQETD--FFSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGV 247 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 248 GNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYA 301 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 302 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 348 >gi|42520959|ref|NP_966874.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652197|sp|Q73G10|FPG_WOLPM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|42410700|gb|AAS14808.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 271 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 163/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + +H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQMRN----KHDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + ++ + G EP + F+ YL K N+K+AL++ K + G+ Sbjct: 112 RFGLVIVLNKEQETD--FFSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 QPSGSAGYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 270 >gi|166365259|ref|YP_001657532.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] gi|166087632|dbj|BAG02340.1| formamidopyrimidine-DNA glycosylase [Microcystis aeruginosa NIES-843] Length = 285 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 133/292 (45%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V + + ++ L R + F I + RR K Sbjct: 1 MPELPEVETVRRGLNQVTQGQKIIGGEVLLQRTLAYPNCEATFLQGIAQTTITNWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL L+ SI VHL M+G + + PI H + N + + D Sbjct: 61 YLLANLDNGSSIGVHLRMTGQLLWVKDTTPLPI----HTRLRFFFANQQELR-----FVD 111 Query: 119 PRRFGFMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + + L+ LG EP D +F A YL K +K LL+Q + Sbjct: 112 TRTFGKIWWIAADKTPESVITGLKKLGLEPFDRNFTADYLYSHCQKSRRPIKTFLLDQNV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY E L+++ + P L + L + I VL AI GG+S Sbjct: 172 VAGIGNIYADEVLFKSGIHPQTAANLLKIEQ------IDLLTKNIISVLETAIAEGGTSF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++H+ G G + VYG+ GE C CG I RI +GRS +C CQ Sbjct: 226 SDFLHVTGVNGNYGAMAWVYGRNGENC-RLCGATIARIKLSGRSAHFCPQCQ 276 >gi|67925991|ref|ZP_00519260.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] gi|67852167|gb|EAM47657.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] Length = 278 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ ++ L R F + RR K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIEGAEVLLDRTLAYPPSSQEFLDQIQNATFDKWQRRGK 60 Query: 59 YLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ L E + VHL M+G + + P H + L N + + + Sbjct: 61 YLLVPLQEKKGCLGVHLRMTGQLLWVKEN------EPLSRHTRLRLFCN---QSQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V + + L+ LGPEP F+ Y + ++ N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPNQPPENIITGLQKLGPEPFAKEFSIDYFIDRLKRRQRNIKTILLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P + L + +L + + +VL AID GG++ Sbjct: 172 IVAGMGNIYADEALFKSGILPTTLGKDLTPQQ------VKRLREAMIEVLKTAIDQGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G + VYG+ +PC CG I +I GRS+ +C CQ Sbjct: 226 FSDFRGVTGINGNYGGVAWVYGRHKQPC-RVCGTPIEKIKLGGRSSHFCPQCQ 277 >gi|222054672|ref|YP_002537034.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] gi|254789439|sp|B9M5V2|FPG_GEOSF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221563961|gb|ACM19933.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. FRC-32] Length = 271 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 155/289 (53%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR + ++ + + LR P G+ I+ + RR KYL Sbjct: 1 MPELPEVETIRRAVGPQVRGKRIIHTNVRATKLRHPLPPELDRLLVGQLIVAMDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +G +II HLGM+G + S + +H+H+ + L Y + + DPR Sbjct: 61 LLRCKGG-TIIFHLGMTGMLYLVKASSP----HGKHDHLDLVLD-----GSYILRFTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+P L GPEP + F+A YL + H++ +K +++ ++VAGI Sbjct: 111 RFGTIIWTDNDPL-QHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSRVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA ++P L + KD+L L+ I+ VL DA++AG S++ + Sbjct: 170 GNIYANESLFRAGIAPQTSASDLSPD----KDLL--LVDAIKGVLTDAVEAGTSNIESAL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + GYF FS+YGK G PC CG IR + GRSTF+C CQK Sbjct: 224 TGERPQGYFPYEFSIYGKKGRPC-PKCGSAIRMMRLGGRSTFFCPLCQK 271 >gi|148976962|ref|ZP_01813617.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] gi|145963836|gb|EDK29096.1| formamidopyrimidine-DNA glycosylase [Vibrionales bacterium SWAT-3] Length = 258 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 20/276 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + T+ + LR+D P G+ I +SRRAKYLLIE + + IV Sbjct: 2 GISPHLVGETIKTLTFRTPKLRWDIPQELKK-LEGQVIRAISRRAKYLLIETDTG-TAIV 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS + +H+HV + LTN + YNDPRRFG + ++ Sbjct: 60 HLGMSGSLRVLDAD----FPAAKHDHVDLKLTNGKVLR-----YNDPRRFGA--WLWSAP 108 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + L GPEP + FNA Y+ + K+ +K +++ K+V G+GNIY EAL+ A Sbjct: 109 DEVHSVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 ++ P+R + + L EI++VL AI GG++L+D+ DG GYF Sbjct: 169 RIHPLRSANKVTKAEWI------LLTDEIKQVLATAIKQGGTTLKDFSQADGKPGYFAQE 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VYGK GE C +C +I+ + R+TFYC CQ Sbjct: 223 LQVYGKAGEKC-PSCEALIQELKIGQRNTFYCEECQ 257 >gi|332977506|gb|EGK14279.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. 1501(2011)] Length = 316 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 97/327 (29%), Positives = 154/327 (47%), Gaps = 55/327 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R +L ++ N V + + + LR+ P + G + D+ RRAKYL Sbjct: 1 MPELPEVETTRTSLKPLL-NKKVETVEVFQPKLRWPVPQDIDS-LTGYVLQDIERRAKYL 58 Query: 61 LIELEGN---------------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 +++ + ++I+HLGMSGS K +H+HV Sbjct: 59 ILKFRRDNKDSLNNKQSNIINIASARDTKALIIHLGMSGSLQQFPVGTEK----RKHDHV 114 Query: 100 TISLTNNTNTKK-YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 + + T+ ++ Y+DPRRFG + ++ Y+ L LG EP D +F+ YL Sbjct: 115 IMQYASADATQTPIQLHYHDPRRFGAILWLD---DYEQKLLGHLGIEPLDEAFSGDYLYD 171 Query: 159 QFHK-----------------KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 + H+ ++K +++Q V G+GNIY E+L+ + + P Sbjct: 172 KIHRLSENKVRKPQSKTKLKPITRSIKAVIMDQVFVVGVGNIYATESLFLSGIHPSTPAD 231 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 L ++ L L + I+ +L AI GGS+LRD+ G+ GYFQ VYGK + Sbjct: 232 KLTKSQ------LSVLAEHIRAILKRAITQGGSTLRDFTVASGTTGYFQQTLLVYGKHKQ 285 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG I ++ GR++ +C CQ Sbjct: 286 PC-PTCGTTIDKVTITGRASTFCPNCQ 311 >gi|86608720|ref|YP_477482.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557262|gb|ABD02219.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 279 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R++L + + + + + + + F + G + RR KY Sbjct: 1 MPELPEVETVRQDLQRLTLGPRILAVEVLLARTIAYPAGEMFGRSLIGTRFTQWQRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ + VHL M+G + S H V ++ + + + D Sbjct: 61 LLGSLDSRAVLGVHLRMTGQLLWVQGSTPL----SAHTRVRLAFEEGWDLR-----FVDQ 111 Query: 120 RRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R FG M LV ++ + P L+TLGPEP +F+ Y K +K ALL+Q +V Sbjct: 112 RTFGQMWLVPAGVELEAVIPTLQTLGPEPFSPAFSEAYFQAALQKSRRLIKAALLDQSLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+ + + P+ L +L + + +VL ++ G++LR Sbjct: 172 AGVGNIYADEALFLSGIHPLTPAVQLSDVAK------ARLREALIEVLRAGLEQRGTTLR 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY + G G +Q VYG+ G+PC CG I+R+ AGRS +C +CQ Sbjct: 226 DYRDLRGLNGNYQGQAWVYGREGDPC-RLCGTPIQRMKLAGRSAHFCPHCQ 275 >gi|269836816|ref|YP_003319044.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269786079|gb|ACZ38222.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 278 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L + T+ + L + P F A G++I D RR K Sbjct: 1 MPELPEVENVRRSLTAAVDGTTIAAVRLGAFTGCIAAPEPDAFVARVTGRRITDFGRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLI L+ +I VHL M+G + +H+H+T L + + ++D Sbjct: 61 YLLIALDSGDTIAVHLRMTGELTVTSPDTP----TGKHHHLTFVLDDGRELR-----FSD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L+ R+LGPEP D+ F A ++ +K LL+Q +A Sbjct: 112 TRKFGRLTLLTPDEAAALD--RSLGPEPLDDRFTAERFAAMLAARSRAVKPLLLDQTFLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EAL+ A++ P+R SL D +L+ I+ L AI+ GG++LRD Sbjct: 170 GVGNIYADEALFAARIHPLRPANSLT------LDEAARLLDSIRVTLAAAIERGGTTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G G Q+ ++Y + G+PC CG+ I R+V R T +C CQ Sbjct: 224 YRDGLGRPGNNQHYLNIYHRAEGDPC-PRCGEPIARLVVVQRGTRFCPRCQ 273 >gi|91205062|ref|YP_537417.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157827633|ref|YP_001496697.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] gi|123388145|sp|Q1RJY6|FPG_RICBR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198741|sp|A8GXR0|FPG_RICB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91068606|gb|ABE04328.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157802937|gb|ABV79660.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] Length = 273 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + + R NLR+ + II+V RRAKYL Sbjct: 1 MPELPEVETLKNSLESKLIGLVIKKVEFKRDNLRYKLSADLADQIVNTNIINVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ N S+IVHLGMSG F ++ + +H+HV +L+NN ++I+ND R Sbjct: 61 IIDFNNNHSLIVHLGMSGRFTLQ----PNNYEVKKHDHVVFNLSNNE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T L + L EP +SF YL + K +KN L++ +IV G+ Sbjct: 112 RFGMIYSFHTELLEK-DFFANLALEPLSDSFELQYLKSKLMNKKVPIKNLLMDNRIVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L AK+ P + + L D + LI ++ VL AI AGG++L+D+V Sbjct: 171 GNIYASESLHLAKIHPDKFGKDLND------DEIKNLIAAVKNVLSKAIIAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D GYF VY + G+ CLS C I + +GRSTFYC CQK Sbjct: 225 NGDNKPGYFTQQLMVYARDGQECLS-CSSSIIKTKHSGRSTFYCKSCQK 272 >gi|303258441|ref|ZP_07344444.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|330999757|ref|ZP_08323465.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] gi|302858887|gb|EFL81975.1| DNA-formamidopyrimidine glycosylase [Burkholderiales bacterium 1_1_47] gi|329573919|gb|EGG55499.1| DNA-formamidopyrimidine glycosylase [Parasutterella excrementihominis YIT 11859] Length = 275 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 152/290 (52%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R ++ + T + R P + S +G+ + + RR KYL Sbjct: 1 MPELPEVEITRLGILKRVGGRRCTGAVVRETRFRKAAPANLSELLKGQCLRSIERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + I+ HLGMSG + +P+ +H+H+ I + V Y+DPR Sbjct: 61 IWSFDRGY-IVSHLGMSGVMRVVDPKATEPV---KHDHIDILFGD------LAVRYHDPR 110 Query: 121 RFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFGF+ + S + P + LG EP + F A L + +K ALL K V G Sbjct: 111 RFGFLIWLPESQDPHDLPEIAKLGEEPFSDGFTADRLHSALANTSLPIKEALLTGKYVVG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A +SP+ L L +L+ I++VL ++ GGS+L+D+ Sbjct: 171 VGNIYCSESLFEACISPLTPANKLSTKR------LERLVAAIRQVLTLSLQEGGSTLKDF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G GYF VYGK G+PC S CG+ I++IVQ R+T++C++CQ+ Sbjct: 225 VSAEGEQGYFTLNAKVYGKAGKPC-SCCGRPIKKIVQNKRATYFCSHCQR 273 >gi|332710075|ref|ZP_08430030.1| DNA lyase [Lyngbya majuscula 3L] gi|332351218|gb|EGJ30803.1| DNA lyase [Lyngbya majuscula 3L] Length = 282 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 98/298 (32%), Positives = 143/298 (47%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IR L V + ++ L R P F A + I D RR K Sbjct: 1 MPELPEVETIRLGLNQVTTGQEIQGGEVLLSRTIAHPISPKDFLAQLKTVTISDWHRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + VHL M+G + ++ P+H V + NN + Sbjct: 61 YLLAKLTKSDTDQAGWLGVHLRMTGQLLW----LSQDQPQPKHTRVRLFFPNNQELR--- 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG M + S + L+ LGPEP F+ YL + H + +K AL Sbjct: 114 --FIDQRTFGRMWWIPPSHLPETIITGLKQLGPEPFSQEFSTDYLVSKLHHRQRAIKTAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAGIGNIY EAL+ + + P + L + KL + +VL AI++ Sbjct: 172 LDQSLVAGIGNIYADEALFLSGIRPETLCKDLGLEQ------IEKLSIAVIQVLEKAIES 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D++++ G G ++ VYG+TGEPC C I+R GRS +C CQ+ Sbjct: 226 GGTTFSDFINVQGVNGNYKGIAWVYGRTGEPC-RICSTPIQRTKLVGRSAHFCPNCQR 282 >gi|291302738|ref|YP_003514016.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290571958|gb|ADD44923.1| formamidopyrimidine-DNA glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 280 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR---FDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + +TD+ + P F A G I RR Sbjct: 1 MPELPEVETIRRGLDGWVIGRRITDVEVRHPRAVRRHHAGPADFRARLLGTTITGTRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + L+ +++ HLGMSG +IE P P H+ I L + ++++ + Sbjct: 61 KFLWLPLDSGDALLCHLGMSGQLLIE------PPDKPDGPHLRIRLVFDQ--AEHQLRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG M LV + + P+ D +F+ + + + +K ALL+Q ++ Sbjct: 113 DQRTFGEM-LVSPDGAELPGEIAHIAPDIYDPAFDLAEFSRRLRARRGEVKRALLDQSLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L ++ L + +L++ I++V A++AGG+S Sbjct: 172 SGVGNIYADEALWRARLHGNHPSQELSDA------VARELVEHIREVFDAALNAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+ +G GYF + +VYG+ EPC CG + RI RS+F+C CQ Sbjct: 226 ALYVNTNGESGYFDRSLAVYGRAEEPC-RRCGTPVERIKFTNRSSFHCPSCQ 276 >gi|148656079|ref|YP_001276284.1| formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] gi|166198744|sp|A5UUN1|FPG_ROSS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|148568189|gb|ABQ90334.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Roseiflexus sp. RS-1] Length = 273 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV++ +L + + + + + + P F G+++ RRAK Sbjct: 1 MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++L+ L+G ++ +HL MSGS ++ +H H+ + L + +V + D Sbjct: 61 WILLFLDGGWTLALHLRMSGSLTVQPADAPPD----KHTHLVLRLDDGR-----QVFFRD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG L++ + G EP N+F L + +K LL+Q ++A Sbjct: 112 PRKFGRARLLDADGRAALD--AAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EALWRA++ P+R L D + L I+ L A+ GGS+LRD Sbjct: 170 GIGNIYADEALWRARIHPLRPASDLS------ADEVAALHDGIRAALRQALTNGGSTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G+ G Q+ F+ Y + G+PC CG I + V A R T YC CQ+ Sbjct: 224 YRNSYGTRGTNQDHFNAYDREGQPC-PRCGATIIKTVVAQRGTHYCPECQR 273 >gi|114049458|ref|YP_740008.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] gi|123130915|sp|Q0HPK4|FPG_SHESR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113890900|gb|ABI44951.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-7] Length = 271 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLIVRNASLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] Length = 306 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L +++ + + + + + F G+ SRR KYL Sbjct: 1 MPELPEVETVVRTLELLIPDRRIEHVEVRVPKMIQMDAGEFCRRLEGQHFRRFSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +++ ++ I H+ M G F ++ +H HV L + T + Y+D R Sbjct: 61 IFQMD-DVYFIAHMRMEGKFYVQRPEEPL----SKHIHVIFDLDDGTQLR-----YHDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+L+E + ++ LGPEP D+ FN Y K+ +K LL+Q VAGI Sbjct: 111 KFGTMELMELNGDLRH--FHELGPEPFDDEFNPDYCRAFLKKRRVPIKQVLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + ++ P ++ L + T L + +++L AI+AGGSS+R Y Sbjct: 169 GNIYANEICFALRIDPRKRCDQLTKAQIT------ALPEITRQILSLAIEAGGSSIRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+G+ GE C CG I++I A R T+YC +CQK Sbjct: 223 SSLGVTGRFQLQIQVHGREGEAC-PLCGGPIKKIAVAQRGTYYCPHCQK 270 >gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] Length = 273 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I L ++ ++ DI L + + F G+K++DV RRAK L Sbjct: 1 MPELPEVETIAAGLAPLVSGRSIRDIFLMQARVVRGDELEFQRRLLGRKVLDVRRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+G L ++ HL M+G + K ++ +H H+ + L + + V ++D R Sbjct: 61 ILDLDGPLHLVFHLKMTGKVWV----PDKGVQPGKHTHLILDLGD-----EVYVFFDDQR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + + R LGPEP ++ T F + + +K+ LL+Q+++AGI Sbjct: 112 RFGYVTALTPPELESWDFYRGLGPEPL--HLSSQDFTDIFQGRKARIKSLLLDQQVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + L D L L +Q+VL +AI AGGSS RDY Sbjct: 170 GNIYADEALYMAGIHPCTRAVDLSG------DQLEALHCSLQQVLQEAIQAGGSSFRDYR 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ F VYGK G PC CG + AGRS+ +C CQ Sbjct: 224 NALGVAGLFQENFKVYGKKGLPC-PECGANLESTKVAGRSSCFCPQCQ 270 >gi|113972208|ref|YP_736001.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. MR-4] gi|117922515|ref|YP_871707.1| formamidopyrimidine-DNA glycosylase [Shewanella sp. ANA-3] gi|123129981|sp|Q0HDC3|FPG_SHESM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198751|sp|A0L2N2|FPG_SHESA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|113886892|gb|ABI40944.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. MR-4] gi|117614847|gb|ABK50301.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Shewanella sp. ANA-3] Length = 271 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPHLVEQTVVDLVIRNASLRWPVP-ELAKQIIGQTIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + +P L LGPEP ++FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCQLPEE-AHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +G GYF VYG+ GE C + CG ++ I R+T +C CQ Sbjct: 223 NAEGKPGYFAQKLHVYGRGGETC-TQCGNLLSEIRLGQRTTVFCGICQ 269 >gi|307154764|ref|YP_003890148.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] gi|306984992|gb|ADN16873.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] Length = 277 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + + + L + F F G I RR K Sbjct: 1 MPELPEVETVCRGLNQLTLGQPIEGGEVLLSRTLAYPFSIAEFWQGITGTSINRWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL +L+ + VHL M+G + + P+H + + + + + + D Sbjct: 61 YLLAQLDSGGGLGVHLRMTGQLLWVK----RETPYPKHTRLRLFVGQDQELR-----FVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + + + + L+ LG EP N F+ YL + ++K+ LL+Q++ Sbjct: 112 IRTFGKIWYIPPNQAPETIMTGLQKLGVEPFSNEFSREYLQQKLKNSRRSIKSVLLDQEV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGNIY EAL+++ + P SL L KL I VL +ID GG++ Sbjct: 172 VAGIGNIYADEALFKSGIKPNAIACSLTPEQ------LEKLRLAICDVLQTSIDKGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G G + VYG+ G+ C CG +I R+ GRS +C CQ Sbjct: 226 SDFLSVTGVNGNYGGVAWVYGRGGKSC-RVCGTLIERVKLGGRSAHFCPKCQ 276 >gi|94266953|ref|ZP_01290604.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] gi|93452358|gb|EAT02983.1| DNA-formamidopyrimidine glycosylase [delta proteobacterium MLMS-1] Length = 342 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 102/332 (30%), Positives = 151/332 (45%), Gaps = 54/332 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L ++ + + +LR P G I V RRAKY Sbjct: 22 MPELPEVEVVRRGLEPLVTGRRIDSVEASGLSLRRPVPLAALCELAVGAVITGVERRAKY 81 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS----------------- 102 LL++L+ +++HLGM+G A +H+H+ I Sbjct: 82 LLLQLDNGSLVVIHLGMTGKLY----PAATTEPPRKHDHLVIKMGTDLFFTSTTPEATPG 137 Query: 103 -LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-NSFNAIYLTHQF 160 L N + + V +ND RRFG + + P L LGPEP D F A YL Sbjct: 138 MLVKNKSVPIFEVRFNDCRRFGLVAVYGPGEAVAPPLLVGLGPEPLDKQQFTAAYLHRCC 197 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ + +KN L++ ++V GIGNIY E L+ A +SP + +L+ Sbjct: 198 RQRRTPIKNLLMDNRVVVGIGNIYANEILFAAGISPF------TSAARIGRRRAGRLVAA 251 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----------GQ 269 +++L AI AGG+++ D+ + G GYFQ +VYG+ G PC C G Sbjct: 252 ARQILTRAIAAGGTTIADFANAAGQAGYFQVQLAVYGRHGTPC-PRCAPGYADHPPAAGA 310 Query: 270 M------------IRRIVQAGRSTFYCTYCQK 289 I R +QAGR+TF+C CQ+ Sbjct: 311 ATTKKVAKGVKPVIERQIQAGRATFFCPRCQR 342 >gi|284053014|ref|ZP_06383224.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis str. Paraca] gi|291570672|dbj|BAI92944.1| formamidopyrimidine-DNA glycosylase [Arthrospira platensis NIES-39] Length = 304 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 93/312 (29%), Positives = 137/312 (43%), Gaps = 40/312 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R+ L N + + + P F A I RR KY Sbjct: 1 MPELPEVETVRKGLNQTTLNQPIVGADVLLDSAIAHPCPVEFIAQINNTTINHWYRRGKY 60 Query: 60 LLIEL---------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 LL +L + VHL M+G + + + P+H Sbjct: 61 LLAQLQAPSQPSNPIFTSKDPIETQTSDGGWLGVHLRMTGQLLWCTSDQSL----PKHTR 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYL 156 V + L + + D R FG + LV L LR LGPEP + F+ YL Sbjct: 117 VRLFLPEERELR-----FVDQRTFGKIWLVPPHLAVMDVISGLRELGPEPLSDEFSPEYL 171 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + +K ALL+Q I+AG+GNIY EAL+ A++ P + L D L + Sbjct: 172 ATKLRRSQRPIKTALLDQSILAGLGNIYADEALFLARIQPTTPSCRLSP------DQLNR 225 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 L I VL AI GG+++R+++++ G G + + VY + G+PC C I +I Sbjct: 226 LYTHIVAVLQQAIADGGTTIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RVCQTPITKIKL 284 Query: 277 AGRSTFYCTYCQ 288 +GR T +C CQ Sbjct: 285 SGRGTHFCPMCQ 296 >gi|126172330|ref|YP_001048479.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|153002820|ref|YP_001368501.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] gi|166198748|sp|A3CYP7|FPG_SHEB5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198749|sp|A6WUE9|FPG_SHEB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|125995535|gb|ABN59610.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Shewanella baltica OS155] gi|151367438|gb|ABS10438.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS185] Length = 271 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|58584846|ref|YP_198419.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497735|sp|Q5GS47|FPG_WOLTR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|58419162|gb|AAW71177.1| Formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 271 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 163/288 (56%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEII L +KN ++ + ++ NLR + +GK I ++ RR KY+ Sbjct: 1 MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++ + VHLGMSG I A+ +H+HV S ++NT+ +I+NDPR Sbjct: 61 IWHIDNDIVVTVHLGMSGKLIYAKGEQAQN----KHDHVIFSFSDNTS-----IIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + ++ + G EP + FN YL K N+K+AL+N K++ GI Sbjct: 112 KFGLVIILNKEQE--VNFFNDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA++SP+R + L KL EI+ L DAI AGGS+L+DY Sbjct: 170 GNIYASESLFRARISPLRSAQDLTYKE------CEKLATEIKNTLSDAIIAGGSTLKDYA 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+GYFQN+F VYGK +PC C I I Q GRST++C CQ Sbjct: 224 QPSGSVGYFQNSFYVYGKVQKPC-KICNNTITLIRQNGRSTYFCNACQ 270 >gi|116072678|ref|ZP_01469944.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] gi|116064565|gb|EAU70325.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. BL107] Length = 278 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + +I + R F A +G + SRR K Sbjct: 1 MPELPEVETVRRGLADRLESFEIAEIEVCRARAIASPGGVERFVAGLKGAMVGAWSRRGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ +LE N S VHL M+G F A P H V N + + Sbjct: 61 YLMAQLEPNRGSWGVHLRMTGQFQWH----ATPAAPCSHTRVRF-----WNQNNEELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M + L+ LGPEP ++F YL + +K ALL+Q Sbjct: 112 DLRSFGEMWWIPEGNDLDSVMTGLKRLGPEPFSDAFTGAYLKQRLKGSARPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P+ + L L +L E+ VL +I GG++ Sbjct: 172 LVAGVGNIYADESLFAAGIPPLSPSGKLTIEQ------LVRLRDELVNVLHISIGVGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ ++G G + VY ++G+PC CG I R +GRST +C CQ+ Sbjct: 226 FSDFRDLEGVNGNYGGQSWVYRRSGQPC-RKCGTPIIREKLSGRSTHWCPSCQR 278 >gi|227503343|ref|ZP_03933392.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] gi|227075846|gb|EEI13809.1| formamidopyrimidine-DNA glycosylase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 145/296 (48%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + +T + + + GK+I +RR K++ Sbjct: 1 MPELPEVESVRHGVESYVVGKEITSVDIAHPRANRGQDEPLAGLIVGKEIAAAARRGKFM 60 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I HT H +T+ L++ T Sbjct: 61 WLEFVGEDPMDSHRDVLFIHLGMSGQLRIGHTDSP-------HRRITVVLSDATE----- 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ S + +G +P + F+ + KK + +K ALL+ Sbjct: 109 LHFVDQRTFGYWLYAPWST------ISHIGLDPLEPDFDIASAARRLRKKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++SP +K +L Q + L+ Q V+ A+ AGG Sbjct: 163 QTLVSGIGNIYADEALWAARISPRKKASALRQKDAV------ALLAAAQTVMSAALKAGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC S CG +I R V GRS+ YC +CQ Sbjct: 217 TSFDSLYVNVNGESGYFARSLAAYGRAGQPC-SRCGTLIERSVIGGRSSHYCPHCQ 271 >gi|33595501|ref|NP_883144.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis 12822] gi|39931245|sp|Q7W185|FPG_BORPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33565579|emb|CAE40222.1| formamidopyrimidine-DNA glycosylase [Bordetella parapertussis] Length = 275 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 142/292 (48%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + V+ T+ + + +R+ P G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + + IVHLGMSGS + +H HV + + +DPR Sbjct: 61 LLRFDHGVQ-IVHLGMSGSLR----RVPEQEAPRKHGHVDWVFDHAV------LRLHDPR 109 Query: 121 RFGFMDLVET--SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG + +P L LG EP D F+ +L F + +K ALL V Sbjct: 110 RFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVV 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E+L+RA + P + + +L I+ L DA+D+GGS+LRD Sbjct: 170 GVGNIYASESLFRAGIDPRTAAQRVSAAR------CDRLAAAIRATLSDALDSGGSTLRD 223 Query: 239 YVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV G G YF +VY + G PC CG IRR+VQ R+T++C CQK Sbjct: 224 YVGASGEPGAYFAIHAAVYERAGLPC-RVCGAPIRRLVQGQRATYFCPSCQK 274 >gi|328676674|gb|AEB27544.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida Fx1] Length = 274 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKI---KHDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|91226564|ref|ZP_01261288.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] gi|91189038|gb|EAS75320.1| formamidopyrimidine-DNA glycosylase [Vibrio alginolyticus 12G01] Length = 252 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 93/272 (34%), Positives = 135/272 (49%), Gaps = 20/272 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M T+ LR+D P G+ I +SRRAKYLLIE + IVHLGMS Sbjct: 1 MVGQTIQSFTFRTPKLRWDIPTELKK-LEGQVIRAISRRAKYLLIETNTG-TAIVHLGMS 58 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 GS + +H+HV + L++ + YNDPRRFG + Sbjct: 59 GSLRVLDAD----FPPAKHDHVDLKLSSGKILR-----YNDPRRFGAWLWCAPGESHAV- 108 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 L +GPEP FNA Y+ + K +K +++ K+V G+GNIY E+L+++++ P Sbjct: 109 -LANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGVGNIYANESLFKSRIHPS 167 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 R L L++ I+ L AI GG++L+D+ DG GYF VYG Sbjct: 168 RPAGKLTSQE------WRLLVENIKMTLEIAITQGGTTLKDFAQADGKPGYFAQELLVYG 221 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 K GEPC CG+ ++ + R+TF+C+ CQK Sbjct: 222 KPGEPC-PECGERLQELKIGQRNTFFCSECQK 252 >gi|298242821|ref|ZP_06966628.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] gi|297555875|gb|EFH89739.1| formamidopyrimidine-DNA glycosylase [Ktedonobacter racemifer DSM 44963] Length = 308 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 146/317 (46%), Gaps = 43/317 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R L + T+ + + + + P F A G+ I V RR K+ Sbjct: 1 MPELPEVEYTARQLQASIVGATIREAQVFWERIIAHPLPEDFCAQISGRTIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN---------------------- 97 LL++L G +I+H M+G+F++ + + Sbjct: 61 LLLDLSGEGLLIIHRRMTGNFLLLEPGWTLDTSLRERDAQAWSTRGPSFTLETDGSQAYS 120 Query: 98 ------HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 V L + N +++ D R+FG + L + S + + LR LGPEP +F Sbjct: 121 SEMNYCRVCFILEDGRN-----LLFTDQRKFGRVSLWQRSQEEEV--LRGLGPEPLSEAF 173 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 N L + S +K LL+Q ++AG+GNIY EAL+ A++ P R SL Sbjct: 174 NIEGLAQALAHRRSPIKQVLLDQTVIAGVGNIYADEALFHARIHPRRAANSLTSQE---- 229 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 + L + + VL+ AI+ GG+S Y + G G N VY + G+PC + CG +I Sbjct: 230 --IASLHEAVVSVLLKAIEHGGTSFSSYRDLWGEAGDNYNHVHVYKQAGKPC-TRCGTLI 286 Query: 272 RRIVQAGRSTFYCTYCQ 288 RIV A RST +C CQ Sbjct: 287 ERIVVAQRSTHFCPVCQ 303 >gi|254374026|ref|ZP_04989508.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] gi|151571746|gb|EDN37400.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3548] Length = 274 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKI---KHDHIVVTLSDN-----LFLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|51891987|ref|YP_074678.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] gi|81692172|sp|Q67R59|FPG_SYMTH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|51855676|dbj|BAD39834.1| formamidopyrimidine-DNA glycosidase [Symbiobacterium thermophilum IAM 14863] Length = 305 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + + + + + P F+A G D+ RR KY Sbjct: 1 MPELPEVETVRRTLCPRVVGRRIRRVEILTPRQIYHPDPATFAADLEGAVFDDIERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L G ++ HL MSG + + P+H HV L + + Y D Sbjct: 61 LLFRL-GPRILVAHLRMSGHLYVCGPEAPR----PRHLHVVFHLDDGGELR-----YADQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L+ + P L LGPEP F L + +++++K ALLNQ +VAG Sbjct: 111 RKFGGFHLLGPGGEGMPPGLANLGPEPLSPEFTPQVLAERLAGRHTSIKAALLNQALVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A++ P R+ SL + +L I++VL+ A++ G++ Y Sbjct: 171 LGNIYADEALFCARIHPAREAGSLTPAE------VERLHGCIRRVLLRAVERRGTTFSLY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G + V+ + GEPC CG IR++ A R T +C CQ Sbjct: 225 RDGEGNEGDMYDELQVFDRAGEPC-PVCGTPIRKVAVAQRGTHFCPRCQ 272 >gi|170078422|ref|YP_001735060.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|34765741|gb|AAQ82445.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] gi|169886091|gb|ACA99804.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7002] Length = 277 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 139/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNM--TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR LM + N T +I L + P HF +G I D RR K Sbjct: 1 MPELPEVETVRRGLMQISLNQQFTGAEILLRKTLAYPTDPDHFLGMIQGLFIQDWQRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL +L ++ +HL M+G F+ + +H + + + + + D Sbjct: 61 YLLGKLSDGSTLGIHLRMTGKFLWTTPD----VPVQKHTRIRFFIEGDRELR-----FVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG + V + L LG EP F A L + K+ +K LL+Q I Sbjct: 112 LRTFGQIWWVPAGTIVKSVITGLTRLGVEPLSPDFTADLLANFCEKRQRPMKTFLLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIY EAL+++ + P RK SL + + KL + I +VL +I GG++ Sbjct: 172 ITGLGNIYADEALFKSGIHPTRKASSLKMSE------IEKLHKAIVEVLETSIAQGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+V G+ G + YG+TGEPC C I RI GRST +C CQ Sbjct: 226 SDFVSTTGTNGNYGGMALTYGRTGEPC-RVCSHPIERIKLGGRSTHFCPQCQ 276 >gi|33866493|ref|NP_898052.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 8102] gi|39931216|sp|Q7U4V2|FPG_SYNPX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633271|emb|CAE08476.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Synechococcus sp. WH 8102] Length = 278 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 98/293 (33%), Positives = 138/293 (47%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + R F G ++ SRR K Sbjct: 1 MPELPEVETVRRGLADRLSLFEIERVEVCRSRAIASSGGVAAFLVGLTGARVGTWSRRGK 60 Query: 59 YLLIELEGNLSI-IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ LE N I VHL M+G F +P H V N + + + Sbjct: 61 YLMAALEPNRGIWGVHLRMTGQFQW----IEEPSTPCTHTRVRF-----WNANGHELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V ++ P L LGPEP +F+A YL Q + +K ALL+Q Sbjct: 112 DVRSFGEMWWVPPDVELTVGIPGLARLGPEPFSEAFSAPYLKRQLKNSSRPIKTALLDQA 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY E+L+ A + P+ L L +L + +VL +I AGG++ Sbjct: 172 LVAGVGNIYADESLFSAGIPPLTPAGRLTLAQ------LERLRSSLVEVLTTSIGAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ ++G G + VY + GEPC CG +IRR +GRST +C CQ Sbjct: 226 FSDFRDLEGVNGNYGGQAWVYRRGGEPC-RRCGTIIRRDKLSGRSTHWCPTCQ 277 >gi|254372567|ref|ZP_04988056.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida GA99-3549] gi|151570294|gb|EDN35948.1| formamidopyrimidine-DNA glycosylase [Francisella novicida GA99-3549] Length = 274 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 159/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTKYNKI---KHDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNDQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|220909541|ref|YP_002484852.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] gi|219866152|gb|ACL46491.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7425] Length = 293 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 138/299 (46%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + D+ L R F +G +I RR K Sbjct: 1 MPELPEVETVRRGLEQLTLGRKCLGGDVLLQRTISHPFSVAEFLDGLQGTRIECWQRRGK 60 Query: 59 YLLIEL-EGNL------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 YLL +L + N + VHL M+G + +S +H V + + ++ Sbjct: 61 YLLADLVDANYPKLRRGWLGVHLRMTGQLLWLESSQPLQ----KHTRVRLFFADAASSLP 116 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + + D R FG M V + + LGPEP F+ YL Q + +KN Sbjct: 117 WELRFVDQRTFGQMWWVSPEQRPEQIISGWGKLGPEPFSPDFSVAYLFQQLQQSRRPIKN 176 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +VAGIGNIY EAL+ + + P+ L + KL I VL ++ Sbjct: 177 ALLDQTLVAGIGNIYADEALFCSGIHPLTPCAELRPAQ------VEKLQGAIISVLQASL 230 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ ++++ G G + VY + GEPC + CG I RI AGRST +C CQ Sbjct: 231 AEGGTTFSTFLNVRGVNGNYGGQALVYDRRGEPCHT-CGTAIERIKLAGRSTHFCPQCQ 288 >gi|134102536|ref|YP_001108197.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007097|ref|ZP_06565070.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|166198746|sp|A4FMJ7|FPG_SACEN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|133915159|emb|CAM05272.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 29/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV+++ + H +++R P F+ G+ + RR Sbjct: 1 MPELPEVEVVRRGVAAHVVGRTVSEVEVLHPRSVRRHVPGPDDFATRLAGRCLTAARRRG 60 Query: 58 KYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KY+ +EL + +++ HLGMSG +++ H V + Sbjct: 61 KYMWLELGGGPEEVDAGEAVLAHLGMSGQLLVQPDEAPDET----HLRVRFRFDDG---- 112 Query: 111 KYRVIYNDPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 ++ + D R FG +LV P+ + P+P + F+ + K+ + + Sbjct: 113 GPQLRFVDQRTFGGLSLTELVSVDGVAVPEPVAHIAPDPLEPVFDLEAAVARMRKRRTGV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K ALL+Q +V+GIGNIY EALWRAKL R T +L + L+ +V+ Sbjct: 173 KRALLDQTLVSGIGNIYADEALWRAKLHWARPTANLTRPQA------RTLLVAAVEVMQA 226 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ AGG+S D YV+++G GYF + +VYG+ G PC CG +RR RS++ C Sbjct: 227 ALTAGGTSFDDLYVNVNGESGYFDRSLAVYGQAGLPC-PRCGTPVRRDAFMNRSSYSCPR 285 Query: 287 CQ 288 CQ Sbjct: 286 CQ 287 >gi|297191815|ref|ZP_06909213.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] gi|297151083|gb|EFH30953.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces pristinaespiralis ATCC 25486] Length = 286 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + H + +R P F+A G+ + D RR Sbjct: 1 MPELPEVEVVRRGLQSWVSGRTIADVQVLHPRAIRRHLPGAQDFAARLTGRTVGDARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + + SI+ HLGMSG +++ + + +H + I T+ T+ + + Sbjct: 61 KYLWLPLADTDTSILGHLGMSGQLLVQ----PEHADDEKHLRIRIRFTDPLATE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L E + L + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHENAPDGLPDVLAHIARDPLDPLFDDAAFHTALRARRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRAKL R T +L + +L++ +++V+ A+ GG++ Sbjct: 174 ISGVGNIYADEALWRAKLHYERPTATLTRPRSV------ELLRHVREVMTAALAVGGTTF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 280 >gi|254412410|ref|ZP_05026184.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] gi|196180720|gb|EDX75710.1| formamidopyrimidine-DNA glycosylase [Microcoleus chthonoplastes PCC 7420] Length = 282 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IR L + + D+ L R F + +I D RR K Sbjct: 1 MPELPEVETIRLGLKQITCTQAIQGGDVLLPRTIAYPVSVAAFWQGLKQTRITDWHRRGK 60 Query: 59 YLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + VHL MSG + + +H V + + Sbjct: 61 YLLAQLNRSEEGDAGWLGVHLRMSGQLLWIQQTEPLQ----KHTRVRLFFPQGQELR--- 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG M V + L+ LGPEP ++F+ YLT + K ++K A+ Sbjct: 114 --FVDQRTFGRMWWVPPGEECDSIITGLQNLGPEPFSDAFSPEYLTQKLKKSQRSIKTAI 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY EAL+ + + P L D + +L Q I +VL I+A Sbjct: 172 LDQSLVAGVGNIYADEALFVSGIHPQTVCARLS------VDQVERLHQGIIQVLKAGIEA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ ++++ G G + VYG+TG+PC C I RI +GRS+ +C CQ Sbjct: 226 GGTTFSSFLNVQGVNGNYSGVAWVYGRTGQPC-RVCETSIERIKLSGRSSHFCPRCQ 281 >gi|304411995|ref|ZP_07393605.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|307305890|ref|ZP_07585636.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] gi|304349545|gb|EFM13953.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS183] gi|306911383|gb|EFN41809.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica BA175] Length = 271 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQDIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP +FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTQAFNVAQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VYG+ GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYGRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|294815351|ref|ZP_06773994.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443705|ref|ZP_08218439.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294327950|gb|EFG09593.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 289 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 155/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ ++ + H + +R F+A +G + RR Sbjct: 1 MPELPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + + S++ HLGMSG +++ A + +H + IS ++ T+ + + Sbjct: 61 KYLWLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T SL + +L+ I+ V+ A+ AGG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTASLTRPRS------AELLGHIRDVMNAALAAGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|302865862|ref|YP_003834499.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315502407|ref|YP_004081294.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] gi|302568721|gb|ADL44923.1| formamidopyrimidine-DNA glycosylase [Micromonospora aurantiaca ATCC 27029] gi|315409026|gb|ADU07143.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. L5] Length = 285 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + + +R P HF+ G+ + V RR Sbjct: 1 MPELPEVETVRVGLAQWVIGRRIAAVEVRHPRAVRRHAPGGAHFADVLAGRTVTGVQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ A + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPVGAADEL----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + + +P D F+ +K + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGAEL-PAEIAHIARDPMDPEFSDEAFVAALRRKRTEIKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R +L + +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRAKLHGTRPADALTRPAAL------RLLGHVRDVLAEAIKQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + YV+++G GYF + + YG+ GEPC CG IRR RS++ C CQ Sbjct: 226 ELYVNVNGESGYFDRSLNAYGREGEPC-PRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|294637898|ref|ZP_06716167.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] gi|291088924|gb|EFE21485.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] Length = 248 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 144/267 (53%), Gaps = 20/267 (7%) Query: 23 VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 + + + + LR+ P A + I+ V RRAKYLL+EL I++HLGMSGS I Sbjct: 2 IDRLVVRQSRLRWPVPEALLA-LHDRPILSVQRRAKYLLLELPEG-WIVIHLGMSGSVRI 59 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 S +H+H+ + LT+ + Y DPRRFG E L L Sbjct: 60 LSASTPAQ----KHDHIDLRLTDGMCLR-----YTDPRRFGAWLWYED--LATASVLAHL 108 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GPEP ++FNA YL + + + +K L++ K+V G+GNIY E+L+ A++ P R S Sbjct: 109 GPEPLSDAFNAAYLLEKARGRRTAVKPWLMDNKLVVGVGNIYASESLFSAQIHPDRLAGS 168 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 L + D + L+Q I+ VL +ID GG++LRD++ DG GYF VYG+ GE Sbjct: 169 LSR------DEIALLVQTIKAVLQRSIDQGGTTLRDFLQADGKPGYFAQQLQVYGRAGEA 222 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQK 289 CL+ CG I+ R+T+YC +CQ+ Sbjct: 223 CLT-CGTTIKSSKHGQRTTYYCPHCQR 248 >gi|225181343|ref|ZP_03734787.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] gi|225167924|gb|EEG76731.1| formamidopyrimidine-DNA glycosylase [Dethiobacter alkaliphilus AHT 1] Length = 274 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE IR L V+ + + +++ GK++ RR KY Sbjct: 1 MPELPEVETIRCGLEQVLPGRVFAAVEIGYGGSIKDPAAADVMTRLPGKRVTGTGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I L+ + +++HL M+G + + +H HV S T+ + + ++D Sbjct: 61 LQIFLDDDSVLVIHLRMTGQLVFNEGAAVTD----KHTHVVFSFTDGST-----LAFSDI 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + V S L TLGPEP F+ YL + K+ +K LLNQ+ +AG Sbjct: 112 RKFGTIWWVPISRLDHIKGLATLGPEPLSADFHFSYLNREVEKRTVTIKALLLNQQFLAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L RA++ P RK RSL + L I++VL +AI+ G+S+ DY Sbjct: 172 LGNIYADEILHRAQILPQRKARSLSRQERQ------HLFSAIREVLAEAIECRGTSMSDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++G FQN VYG+ + C C + I R AGR T YCT CQ Sbjct: 226 RDSAGALGEFQNRLQVYGRRDQDC-PRCQKKISRSKVAGRGTHYCTSCQ 273 >gi|160877565|ref|YP_001556881.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217975407|ref|YP_002360158.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|189044676|sp|A9KW47|FPG_SHEB9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789451|sp|B8EDQ9|FPG_SHEB2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|160863087|gb|ABX51621.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS195] gi|217500542|gb|ACK48735.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS223] gi|315269763|gb|ADT96616.1| formamidopyrimidine-DNA glycosylase [Shewanella baltica OS678] Length = 271 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R+ + + TV D+ + +LR+ P + G+ I V RRAKYL Sbjct: 1 MPELPEVEVTRQGIAPFLVEQTVVDLVIRNGSLRWPVP-DIAKQIIGQVIRQVRRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + S IVHLGMSGS I +H+H+ + L N + +NDPR Sbjct: 60 LIDTDAGTS-IVHLGMSGSLRILPHDTP----VEKHDHIDLVLANGRILR-----FNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E + +P L LGPEP N+FN L K +K L++ IV G+ Sbjct: 110 RFGAWLWCELPEE-AHPLLAKLGPEPLTNAFNVTQLAAALAGKKKAIKLCLMDNHIVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P + + + L L+ E++++L AI GG++L+D+ Sbjct: 169 GNIYANEALFAAGIHPEAEAGKID------IERLTVLVAEVKQILAHAIKQGGTTLKDFT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DG GYF VY + GE C S CG ++ I R+T +C CQ Sbjct: 223 NADGKPGYFAQKLHVYSRGGETCTS-CGNLLSEIRLGQRTTVFCGICQ 269 >gi|88606811|ref|YP_505015.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] gi|88597874|gb|ABD43344.1| formamidopyrimidine-DNA glycosylase [Anaplasma phagocytophilum HZ] Length = 268 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 157/289 (54%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R+L + + D+ + R++LR F G++I V R AKYL Sbjct: 1 MPELPEVEVIARSLADKIIGQRIRDVEVKRRDLRVRIADDFEQLVTGREICSVYRVAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L+ ++ H+GMSG + H + +H+ V ++ + Y +++ND R Sbjct: 61 VMQLDSGAKLVFHMGMSGRILYMHAPVPE-----KHDCVVFAMQHG-----YSLVFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L++ L +GP+P +FNA L + K + +K+ L+N +V GI Sbjct: 111 RFGLVTLLDGEGYR--SLLEKMGPDPFSEAFNADCLLNMHGK--ARIKSVLMNSAVVVGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A + P R+ +L + ++++ ++VL AI GGSS+RDY Sbjct: 167 GNIYASEILFTAAILPHREVSTLSREE------CCRIVESTREVLKLAIATGGSSIRDYR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +G F F VYG+ GE C + CG I+ Q GRSTF+C +CQK Sbjct: 221 TPTGDVGNFSKHFRVYGRKGEKCYT-CGGEIQVEKQGGRSTFFCRHCQK 268 >gi|187932021|ref|YP_001892006.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712930|gb|ACD31227.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. mediasiatica FSC147] Length = 274 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKI---KHDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + LI I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLISSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|172039237|ref|YP_001805738.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] gi|226761669|sp|B1WTF7|FPG_CYAA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171700691|gb|ACB53672.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] Length = 283 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 133/293 (45%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ + L R F RR K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTIRGGKVLLPRTLAYPVSIEEFLEQINNATFGQWQRRGK 60 Query: 59 YLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ LE + VHL M+G + + P H + L + + + + Sbjct: 61 YLLVPLEEKKGWLGVHLRMTGQLLWVKQN------EPLSRHTRLRLFCD---RSKELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V + + L+ LG EP N+F+ Y + + N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPNQPPETIITGLQKLGLEPFSNAFSLDYFIDKLKGRQRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAGIGNIY EAL+++ + P + L Q + +L + + +VL AI+ GG++ Sbjct: 172 VVAGIGNIYADEALFKSGIRPTTLGKELSQPQ------VKRLREAMIEVLKTAIEEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G + VYG+ +PC CG I RI GRS+ +C CQ Sbjct: 226 FSDFRGVTGINGNYSGVAWVYGRHNQPC-RVCGTPIERIKLGGRSSHFCPQCQ 277 >gi|62261847|gb|AAX78021.1| unknown protein [synthetic construct] Length = 309 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 27 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 86 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 87 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKI---KHDHIVVTLSDN-----LSLVYNDPR 138 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 139 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 198 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 199 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 252 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 253 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 300 >gi|56707813|ref|YP_169709.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89256827|ref|YP_514189.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110670284|ref|YP_666841.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115315213|ref|YP_763936.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118497202|ref|YP_898252.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida U112] gi|134302414|ref|YP_001122384.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|167009866|ref|ZP_02274797.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC200] gi|194323501|ref|ZP_03057278.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208778995|ref|ZP_03246341.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|224456884|ref|ZP_03665357.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|254368108|ref|ZP_04984128.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|254369711|ref|ZP_04985721.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|254370309|ref|ZP_04986314.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874627|ref|ZP_05247337.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|81677082|sp|Q5NGY3|FPG_FRATT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|56604305|emb|CAG45326.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis SCHU S4] gi|89144658|emb|CAJ79982.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica LVS] gi|110320617|emb|CAL08709.1| Formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis FSC198] gi|115130112|gb|ABI83299.1| DNA-formamidopyrimidine glycosylase [Francisella tularensis subsp. holarctica OSU18] gi|118423108|gb|ABK89498.1| formamidopyrimidine-DNA glycosylase [Francisella novicida U112] gi|134050191|gb|ABO47262.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis WY96-3418] gi|134253918|gb|EBA53012.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica 257] gi|151568552|gb|EDN34206.1| hypothetical protein FTBG_00064 [Francisella tularensis subsp. tularensis FSC033] gi|157122670|gb|EDO66799.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FSC022] gi|194322356|gb|EDX19837.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. novicida FTE] gi|208744795|gb|EDZ91093.1| formamidopyrimidine-DNA glycosylase [Francisella novicida FTG] gi|254840626|gb|EET19062.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158989|gb|ADA78380.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. tularensis NE061598] Length = 274 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I +E +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIEDDLQLIIHLGMSGIIKVIDSTNYNKI---KHDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|328675725|gb|AEB28400.1| Formamidopyrimidine-DNA glycosylase [Francisella cf. novicida 3523] Length = 274 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 158/289 (54%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + + RR K+L Sbjct: 1 MPELPEVETVKRGLIKNIIDKKILDIEINTDKLRYAIDKDQLVKIKNKIVKQIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +E +L +I+HLGMSG + ++ I +H+H+ + L++N ++YNDPR Sbjct: 61 IVVIEDDLQLIIHLGMSGVIKVIDSTNYNKI---KHDHIVLILSDN-----LTLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLLSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + PIR + ++ + KL+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPIRASNTITKKEA------EKLVSSIKKILEKAIIQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I +V R+TF+C CQK Sbjct: 227 NTEGKPGYFAQQLNVYGRVNQQCY-VCNTRIESLVIGQRNTFFCKKCQK 274 >gi|119492791|ref|ZP_01623877.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] gi|119452944|gb|EAW34116.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] Length = 301 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 147/314 (46%), Gaps = 41/314 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L V +N T+ ++ L R F G+ I RR K Sbjct: 1 MPELPEVETVKRGLNQVSRNQTIQGGEVLLKRTLAHPVSIDEFITGLSGQAIAGWYRRGK 60 Query: 59 YLLIELE---------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 YLL E N + VHL M+G + ++ +H Sbjct: 61 YLLAEFSTQFNPNSDDSQNLEFSDLQTFSNGGLAVHLRMTGQLLWV----SQDEPLSKHT 116 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIY 155 V + N + + + D R FG M + +++ L+ LG EP F+ Y Sbjct: 117 RVRLFFPN-----RQELRFVDQRTFGQMWGIPPNVEVSKIVTGLQKLGHEPFSEEFSIKY 171 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 LT QF+++ +K ALL+QK+VAG+GNIY E L+ + +SP + L + Sbjct: 172 LTTQFYRRQRPIKTALLDQKLVAGVGNIYADETLFLSGISPTTRCAELTPAQ------IE 225 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L ++ +VL AIDAGG+++R+++++ G G + VY + G+PC C I R+ Sbjct: 226 TLHAQLVQVLKTAIDAGGTTVRNFLNVAGVNGNYAGQAWVYNRAGQPC-RVCQTPIERLK 284 Query: 276 QAGRSTFYCTYCQK 289 AGRS +C CQK Sbjct: 285 LAGRSAHFCPRCQK 298 >gi|156743763|ref|YP_001433892.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] gi|189044671|sp|A7NQM8|FPG_ROSCS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|156235091|gb|ABU59874.1| formamidopyrimidine-DNA glycosylase [Roseiflexus castenholzii DSM 13941] Length = 283 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ +L + + + + + + P F G+++ RRAK Sbjct: 1 MPELPEVQHTADSLGIQIAGARIARVERLDWTRMVETPSPDEFIRLLTGRQVRGWDRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++L+ L+ ++ +HL MSGS + + +H H+ + L + ++ + D Sbjct: 61 WILLFLDDGWTLALHLRMSGSLTVHPAEA----QPDKHTHLALRLEDGR-----QIFFLD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG L++++ G EP ++F L + +K LL+Q ++A Sbjct: 112 PRKFGRARLLDSAGLAALD--AAHGDEPLSDAFTVERLASLLRNRKRAIKPLLLDQSVIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EALWRA++ P+R L + L I+ L A+ GGS+LRD Sbjct: 170 GIGNIYADEALWRARIHPLRPAADLSAAE------VAALHDGIRAALRQALANGGSTLRD 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + G+ G Q F+ Y + G PC CG I + V A R T YC CQ Sbjct: 224 YRNSYGAGGTNQEHFNAYDREGRPC-PRCGATIIKTVVAQRGTHYCPACQ 272 >gi|118602365|ref|YP_903580.1| formamidopyrimidine-DNA glycosylase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166198745|sp|A1AW02|FPG_RUTMC RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118567304|gb|ABL02109.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 269 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 160/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI +R L+ ++ N V+ + LHR+NLR+ P + +KI + RRAKYL Sbjct: 1 MPELPEVEITKRGLVPLIINQEVSRVILHRENLRWAIPKNLITILANQKIKTIKRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I+HLGMSGS + +H H + N T+ + NDPR Sbjct: 61 LIKFEAG-TLIIHLGMSGSIKVVDIKTPLL----KHEHFELQFNNGTSMR-----LNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +LG EP + FN YL + K N+K+ +++ KIV G+ Sbjct: 111 RFGAVLFSKDG---SHKLLDSLGVEPLEAVFNNGYLYQKSRNKRKNIKDFIMDSKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A ++P RK ++ K L Q I+ +L AI AGG++L+D+ Sbjct: 168 GNIYACESLFMASINPQRKAGNVS------KTRYKILTQCIKDILTQAIKAGGTTLQDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG+ GYF SVYG + C C I +IVQ RSTFYC CQ Sbjct: 222 QVDGNPGYFTQTLSVYGCENKTC-HFCKSKIIKIVQNQRSTFYCRKCQ 268 >gi|242277525|ref|YP_002989654.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] gi|259647331|sp|C6BUX8|FPG_DESAD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|242120419|gb|ACS78115.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio salexigens DSM 2638] Length = 274 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L ++ T+ + + + + FS+ G+KI + RRAK L Sbjct: 1 MPELPEVEVISRGLAESLEGKTIESVKILNHSSVKMPWYLFSSRVAGEKITRIHRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++L +L I HL M+G + + P H + LT+ + + ++D R Sbjct: 61 IMDLGDDLHITFHLKMTGRVL----AHEGPTTPEPHTRIVFGLTDGGS-----IEFHDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + + ++ + LGPEP + A L + + + +K LLNQ +VAG Sbjct: 112 KFGEVRALNNEELQEWDFYKNLGPEPLE--VTAEELAERITGRKAQIKGLLLNQSVVAGC 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R+ + P K L + L KL E+Q VL AI GSS+RDYV Sbjct: 170 GNIYADESLFRSGIHPKAKASDLSN------ESLVKLFTELQAVLKQAIQENGSSIRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQN+F VYGK GEPC +CG++ AGR++ +C+ CQK Sbjct: 224 DAGGDAGGFQNSFKVYGKKGEPC-PDCGKIFEGATVAGRTSTFCSNCQK 271 >gi|148238875|ref|YP_001224262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] gi|147847414|emb|CAK22965.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7803] Length = 283 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 146/299 (48%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +++ + DI + R P RG+K+ SRR K Sbjct: 1 MPELPEVETVRRGLANRLQSFVIDDIEVLRDRAVASPGGPQALRLGLRGQKVGAWSRRGK 60 Query: 59 YLLIELEGNLSII------VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ +L + VHL M+G F T P + +H V + NT Sbjct: 61 YLVAQLHDPQTGHCNGVWGVHLRMTGQFQWHPT----PTEPCRHTRVRL-----WNTAGE 111 Query: 113 RVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V ++ L+ LGPEP FNA YL + ++K A Sbjct: 112 ELRFVDLRSFGEMWFVPQNVSIDAVMTGLQRLGPEPFSEEFNATYLEQKLKGSTRSIKAA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG GNIY E+L+ A ++P RK L L +L + VL +I Sbjct: 172 LLDQAVVAGAGNIYADESLFAAGIAPHRKAGELNLPE------LERLCTCLVDVLEMSIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGG++ D+ ++G G + SVY +TG+PCL+ CG I R GRST +C CQ+ Sbjct: 226 AGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPCLA-CGTPIERQRLGGRSTHWCPVCQR 283 >gi|67906503|gb|AAY82610.1| predicted formamidopyrimidine-DNA glycosylase [uncultured bacterium MedeBAC35C06] Length = 269 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 164/289 (56%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L ++ + + ++ +NLR+ F KKII ++RRAKY+ Sbjct: 1 MPELPEVETTMSALQPFVE-KKIVSVDINNRNLRWKIEKDFEKNISNKKIISIARRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L II+HLGMSG+ I+ +H+H+ + L K ++IYND R Sbjct: 60 IFNLSDG-FIILHLGMSGNIRIQDLKSNTYK---KHDHIILYL------KDKKIIYNDIR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + ++ LGPEP + FN YL + K +N+KN ++NQK+V G+ Sbjct: 110 RFGSIHF--TDNAKDHFLIKNLGPEPLLSDFNKKYLFNISRKSKTNIKNFIMNQKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A+++P T S+ + + +L++ I+ +L AI+ GG++L+D+ Sbjct: 168 GNIYASEALFEARINPNMITNSISEED------CKRLVKSIKNILKIAINMGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DGS GYF+ VYG+ + C S C +I++IV RSTFYC CQK Sbjct: 222 SVDGSEGYFKIKLKVYGRENKKCKS-CKGVIKKIVLNQRSTFYCLDCQK 269 >gi|145224770|ref|YP_001135448.1| formamidopyrimidine-DNA glycosylase [Mycobacterium gilvum PYR-GCK] gi|315445100|ref|YP_004077979.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|189044665|sp|A4TE57|FPG_MYCGI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145217256|gb|ABP46660.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium gilvum PYR-GCK] gi|315263403|gb|ADU00145.1| DNA-(apurinic or apyrimidinic site) lyase ;Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 282 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T++ + +H P +A I RR Sbjct: 1 MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++VHLGMSG ++ P++N H + + L + T + + Sbjct: 61 KYLWLTLGDGSAVVVHLGMSGQMLLG------PVRNENHLRIAVLLDDGT-----ALSFV 109 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLV P+ + +P D F+ + + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY E+LWRAK++ R G K L +L+ V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADESLWRAKINGARLAS------GVSKAKLAELLDAATDVMTDALAQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSFYCPRCQ 277 >gi|258512306|ref|YP_003185740.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479032|gb|ACV59351.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 285 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + +R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ + ++ HL M G + + + S + H HV L + + Y D Sbjct: 61 LLFQLDQ-VLLVSHLRMEGRYAVANPSEPEL----PHTHVVFRLASGRELR-----YADV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG MD V L LGPEP D + + L ++ + + +K+ LL+Q+ +AG Sbjct: 111 RQFGTMDAVLKGEPL-PKGLAELGPEPFDPALDGAALHERWRGRRAPIKSLLLDQRQIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+ ++ L L++EI+ VL AI GGSS+R + Sbjct: 170 LGNIYVDEALFAAGIHPLTPAGAVGAEE------LGVLLREIRDVLARAIREGGSSVRSF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ +VYG+ GEPC CG I++I AGR T C CQ Sbjct: 224 RDGYGRHGGFQIQLAVYGRAGEPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|93117321|gb|ABE99578.1| fpg [Neisseria meningitidis] Length = 258 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTG-ILL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|325675925|ref|ZP_08155608.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553163|gb|EGD22842.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + H + +R P + G+ ++ RR Sbjct: 1 MPELPEVEVVRRGLEAHVVGHTIADVEVLHPRAVRRHLPGSLDLAGRLEGQTVVGAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE +++I+VHLGMSG +++ + + + +H + L + + + Sbjct: 61 KYLWLVLEPSSVAIVVHLGMSGQMLVQDPT----VPDEKHLRIRARLESG-----IDLRF 111 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV + + +P D F+ + K++ +K ALL+ Sbjct: 112 VDQRTFGGWALADLVTVDGTVVPDSVAHIARDPLDPRFDPDLVVKALRAKHTEIKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+G+GNIY EALWRA++ R T L L L+ + V+ +A+D GG Sbjct: 172 QTVVSGVGNIYADEALWRAEIHGNRPTDKLSGPR------LRVLLDAARDVMTEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ PC CG IRR RS++ C CQ Sbjct: 226 TSFDALYVNVNGQSGYFDRSLNAYGQENLPC-RRCGAPIRREKFMNRSSYSCPKCQ 280 >gi|319942576|ref|ZP_08016885.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] gi|319803872|gb|EFW00794.1| DNA glycosylase [Sutterella wadsworthensis 3_1_45B] Length = 275 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 147/292 (50%), Gaps = 22/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + VT + + LR +A G + + RRAKYL Sbjct: 1 MPELPEVEVTRRGLAPAIVGRCVTAVNVRTPKLREPL-QDLAALLPGLTLEHLERRAKYL 59 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + ++ H+GMSGS+ I +H+H I + V Y Sbjct: 60 IWTFRSAAGEKRWLLTHMGMSGSWRIWPVPAPSAH---KHDHADIVFGD------VLVRY 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + + T + P L LG EP D + A + K + ++K LL+ KI Sbjct: 111 TDPRRFGSILFMTTDPRKSLP-LTKLGCEPWDPTLTADRFYTELQKTHRSIKEVLLSGKI 169 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 V G GNIY EAL+ A + P R ++ + +L++ ++K L AI AGGS+L Sbjct: 170 VVGCGNIYCSEALFAAGIRPTRPADAISKARAG------RLLESVRKTLETAIAAGGSTL 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D+ + G G+F A +VYG+ G+PC CG+ I RI Q GRSTF+C +CQ Sbjct: 224 HDFHGVSGETGWFPLACAVYGREGKPC-PICGRPITRIEQGGRSTFWCPHCQ 274 >gi|258544390|ref|ZP_05704624.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] gi|258520349|gb|EEV89208.1| adenylate kinase [Cardiobacterium hominis ATCC 15826] Length = 272 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++N + I H LR G + + RR K+L Sbjct: 1 MPELPEVETTRRGIAPHLENHRIHSISAHIAKLRQPLDTAELNRISGHTLTRIERRGKHL 60 Query: 61 LIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + L++ +HLGMSG+ I S + +H+HV I+L N + +DP Sbjct: 61 ILHSDQPELALHIHLGMSGALRITPASSP----HKKHDHVAITLDNGDELR-----LHDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L++ + L LG EP D++FN L Q K S +K ++NQ+ + G Sbjct: 112 RRFGHVALIDPTRPPA--SLANLGDEPLDDNFNGARLYAQTRGKKSAIKTHIMNQRYLTG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ + + P R +L + + +L + I+ VL AI GG++LRD+ Sbjct: 170 VGNIYATEALFASAIHPARAATTLTRAD------CDRLAEAIKTVLQAAIAQGGTTLRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF + YG++GEPC C + ++ + GRST YC +CQ Sbjct: 224 TQPDGTHGYFAQTLNAYGRSGEPC-PRCQRPLQNMTIGGRSTVYCAHCQ 271 >gi|237725655|ref|ZP_04556136.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D4] gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4] Length = 276 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 139/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE I+R + + + + + + + + + F T G+ I +SRR KY Sbjct: 1 MPEMPEVETIKRIIEPQIVGVKIDSVITNHSQVIAYPDMYRFEQETNGQTINKMSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I + +I+HL M+G ++ + H H+ ++L+N T + Y D Sbjct: 61 LTIHFDSGDRLILHLRMTGQLLVTPHNYPMEN----HTHLIMNLSNGTQLR-----YIDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RR G L + L LG EP DN+ A YL K+ +K L +Q ++AG Sbjct: 112 RRLGRFWLFGKNDIDDKSGLEKLGMEPLDNNLTAPYLVAHLSKRKRPIKEMLHDQTVIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L A + P + L L+ +I++++ ++I+ S ++Y Sbjct: 172 IGNIYSDEILHAAGIYPGKYCSDLSDKEWNS------LVVKIREIIRNSIETNRMSPQEY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG+ GE C NCG +I +IV GRS+ YC +CQK Sbjct: 226 LEGKGKEYRNMPYLRVYGQKGERC-KNCGSIIEKIVIGGRSSCYCPHCQK 274 >gi|291294733|ref|YP_003506131.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] gi|290469692|gb|ADD27111.1| formamidopyrimidine-DNA glycosylase [Meiothermus ruber DSM 1279] Length = 268 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 148/292 (50%), Gaps = 30/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + + LH+ R+ + G++++ SRR KYL Sbjct: 1 MPELPEVETTRRILEPYLLGQRIQQL-LHQDPARY----RNTERAEGRRVLGTSRRGKYL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+ NL +IVHLGM+G F E +H VT+ L + T + Y DPR Sbjct: 56 IIHLDENLELIVHLGMTGGFRFEPH---------RHTRVTLHLPHQT------LYYTDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +VE + L +GPEP + F + +K LL Q+ VAG+ Sbjct: 101 RFGKWWVVEAGDYREIDLLCRMGPEPLSDDFTLAHFQQALR-TPRKIKEVLLAQEAVAGV 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY E+LW +++ P R SL + +L + I+ V+ A++AGGS+L D Sbjct: 160 GNIYADESLWLSQIHPERPAASLSSPE------VRRLYKAIRVVMERAVEAGGSTLSDAS 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSN-CGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ + Y +TG+PC C I +IV GR T +C CQ+ Sbjct: 214 YRQPDGQPGYFQFQHNAYDRTGQPCKRKGCTGRIAKIVVGGRGTHFCPQCQQ 265 >gi|302391164|ref|YP_003826984.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] gi|302203241|gb|ADL11919.1| formamidopyrimidine-DNA glycosylase [Acetohalobium arabaticum DSM 5501] Length = 275 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + +TD+ + + L + F G +I D+ RR KY Sbjct: 1 MPELPEVQTVVDTLTESVLKKEITDVEVKNEKLIANLEVEEFIDTLTGSRIEDIRRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +++EL+ + ++ HL M+G F+ C K + +++++ N + Sbjct: 61 IIMELDTDYYLVTHLRMTGRFVY----CQKKEEVDKYDYIFFKFKGNDELR-----LGSK 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F LV + + L LGPEP + F + +K LLNQK +AG Sbjct: 112 RKFTRTYLV--ADLKEAGSLTKLGPEPLSDEFTLDKFKEILSTRRGRIKPLLLNQKFLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ +++ P+R +L + KL Q IQ+VL + I+ G++ DY Sbjct: 170 LGNIYVDEALFISQIHPLRTADTLTDQE------IKKLYQAIQQVLAEGIEHRGTTKWDY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G +QN VY + GE C C ++++I GR T++C CQ Sbjct: 224 VDASGEAGSYQNYLRVYDRKGEECN-RCAAILKKIKVGGRGTYFCPQCQ 271 >gi|67458634|ref|YP_246258.1| formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] gi|75536900|sp|Q4UMW5|FPG_RICFE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|67004167|gb|AAY61093.1| Formamidopyrimidine-DNA glycosidase [Rickettsia felis URRWXCal2] Length = 276 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 163/288 (56%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + ++ L R NLR+ ++ I+DV RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIELIIENVELKRDNLRYKLSPLLASEISNTNILDVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ + S+IVHLGMSG F ++ ++ + +H+HV L+N ++I+ND R Sbjct: 61 IIDFNNDYSLIVHLGMSGRFTLQPSN----YETKKHDHVIFDLSNGE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP +S YL + + +KN +++ +I+ G+ Sbjct: 112 RFGMIYNFKTNFLEKE-LFNNLGVEPLSDSLTLEYLKSKLITRKIPIKNLIMDNRIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A++ P + +L D + LI+ I++VL AI AGG++L+D+V Sbjct: 171 GNIYASESLYLARIHPDKLGSNLRD------DEIESLIKSIREVLAKAITAGGTTLKDFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF +VYG+ + CL NC I + +GRSTFYC CQ Sbjct: 225 NGDNKPGYFTQQLTVYGRERQNCL-NCSSTIIKTKHSGRSTFYCRTCQ 271 >gi|81300132|ref|YP_400340.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] gi|60416387|sp|Q08079|FPG_SYNP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81169013|gb|ABB57353.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] Length = 282 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 134/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L T + + + P F A + +I + RR KY Sbjct: 1 MPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQQTQIQEWRRRGKY 60 Query: 60 LLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LL +L + VHL M+G F + +H V + + + Sbjct: 61 LLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLT----KHTRVRLRFEGDRELR----- 111 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + L LGPEP F A YL + + +K ALL+ Sbjct: 112 FIDIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLRDRLRRSQRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAGIGNIY E+L+R + P + L + KL + I +VL +I AGG Sbjct: 172 QSLVAGIGNIYADESLFRTGIHPTTPSDRLTKIQA------EKLREAIVEVLTASIGAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ D+ + G G + VYG+ +PC CG I+++ AGRS+ +C CQ Sbjct: 226 TTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLAGRSSHFCPRCQ 279 >gi|255525116|ref|ZP_05392060.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296188081|ref|ZP_06856473.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|255511170|gb|EET87466.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] gi|296047207|gb|EFG86649.1| formamidopyrimidine-DNA glycosylase [Clostridium carboxidivorans P7] Length = 277 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++R L +K + + + K + + F G+ I+ + RR K+ Sbjct: 1 MPELPEVETVKRVLEPQIKGQKIKYVDISNKQVIAYPDAEAFCDNVIGQTIVGIGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I E +++HL M+G +I + K +H HV SL N + Y D Sbjct: 61 LNILFESGDRMVLHLRMTGCLLITPSEYEKA----KHTHVVFSLKNGNELR-----YIDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + + + LG EP D + YL + KK +K LL Q +VAG Sbjct: 112 RRFGRFWFLKKDEEDTFTGINKLGLEPFDKNLTGEYLHNCLLKKKKPIKECLLEQSMVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A L P R SL +L ++I L I+ S DY Sbjct: 172 IGNIYGDEILFAAGLCPSRPANSLTCEE------YDRLAKQISVTLAYFIEKNAISPEDY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG E C C +++I+ AGRS+ +C CQ+ Sbjct: 226 LAGKGLKYRNTPYLKVYGHEKEKC-PVCRHDLKKIMLAGRSSVFCPNCQR 274 >gi|295836306|ref|ZP_06823239.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295825948|gb|EFG64563.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 284 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + H +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G +++ HLGMSG +++ + +H + I + T+ + + Sbjct: 61 KYLWLPLDGAGEAVLAHLGMSGQLLVQPHAAPA----EKHLRLRIGFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTAIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T SL + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTASLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG IRR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPIRRDAWMNRSSYYCPKCQR 280 >gi|302522138|ref|ZP_07274480.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|318056549|ref|ZP_07975272.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actG] gi|318076723|ref|ZP_07984055.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Streptomyces sp. SA3_actF] gi|302431033|gb|EFL02849.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 284 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + H +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHVAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G +++ HLGMSG +++ + +H V I + T+ + + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPA----ERHLRVRIGFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T L + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTAGLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|91070098|gb|ABE11022.1| formamidopyrimidine-DNA glycolase [uncultured Prochlorococcus marinus clone ASNC729] Length = 292 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 142/308 (46%), Gaps = 35/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F I RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDSTIAFPINKEEFIKGLLNSLIYKWDRRGK 60 Query: 59 YLLIELE---------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 YL+ +L+ N +++HL M+G F S +H + Sbjct: 61 YLIAQLKEVQNENGQFLLENSKNNGFLVIHLRMTGYFKFIENSS----HPCKHTRIRFFD 116 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFH 161 NN + Y D R FG M + L L +LGPEP F+A YL Sbjct: 117 KNNNELR-----YIDVRSFGQMWWINKDLSLNKIVKGLGSLGPEPFSKDFDANYLKKVIS 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ D L KL + I Sbjct: 172 KRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTI------KNDELIKLKESI 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R GRST Sbjct: 226 VTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RRCGNLIERQKITGRST 284 Query: 282 FYCTYCQK 289 +C CQK Sbjct: 285 HWCPKCQK 292 >gi|156502993|ref|YP_001429058.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] gi|156253596|gb|ABU62102.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 274 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 160/289 (55%), Gaps = 15/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKI---KHDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYF +VYG+ + C C I+ +V A R+TF+C CQK Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFFCKKCQK 274 >gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] Length = 267 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 156/290 (53%), Gaps = 26/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I+R+L + TVT + + R ++ R DF G +IIDV+RR K Sbjct: 1 MPELPEVETIKRSLAP-IVGKTVTGLMVLRSDIVKRCDFG---VKNAVGSEIIDVTRRGK 56 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+I+L ++VHLGM+G ++ +S H H+ I+L + V Y D Sbjct: 57 YLVIKLSCARHLVVHLGMTGRLLMVASSEPIA----AHTHMVINLEGEKD-----VRYQD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PRRFG + V K +LGPEP D SF L + ++++++K LL+Q +VA Sbjct: 108 PRRFGNISFV----KDTGGFFSSLGPEPLDPSFGPEELARRLKRRSASIKPVLLDQGVVA 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ A L P R L + + +L I++V+ AI+ G++ RD Sbjct: 164 GIGNIYADEILFAAGLHPARGASELNEYE------ISRLHAAIKEVITRAIECRGTTFRD 217 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G FQ +VYG+ G+PC CGQ +++ V GR+T YC CQ Sbjct: 218 YRDGFNQPGQFQTHLAVYGRYGQPC-PKCGQPVQKTVIGGRTTHYCAICQ 266 >gi|218288810|ref|ZP_03493073.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] gi|218241168|gb|EED08344.1| formamidopyrimidine-DNA glycosylase [Alicyclobacillus acidocaldarius LAA1] Length = 285 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + D+ + + +R + F+ R + I V RR KY Sbjct: 1 MPELPEVETVRRHLAERIEGDVIRDVEVRLPRIVRHPALNVFAERLREQGIHRVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L+ + ++ HL M G + + + S + H HV L + + Y D Sbjct: 61 LLFQLDQ-VLLVSHLRMEGRYAVANPSEPEL----PHTHVVFRLASGRELR-----YADV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG MD V L LGPEP D + + L ++ + + +K+ LL+Q+ +AG Sbjct: 111 RQFGTMDAVLKGEPL-PKGLAELGPEPFDPALDGTALHERWRGRRAPIKSMLLDQRQIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P+ ++ L L++EI+ VL AI GGSS+R + Sbjct: 170 LGNIYVDEALFAAGIHPLTPAGAVGAEE------LGVLLREIRDVLARAIGEGGSSVRSF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ +VYG+ G+PC CG I++I AGR T C CQ Sbjct: 224 RDGYGRHGGFQIQLAVYGRAGQPC-PRCGGAIQKIKVAGRGTHVCPACQ 271 >gi|271969196|ref|YP_003343392.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] gi|270512371|gb|ACZ90649.1| DNA-formamidopyrimidine glycosylase [Streptosporangium roseum DSM 43021] Length = 288 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 149/295 (50%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + H + +R P FS+ +G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRVIAHAEVLHPRAIRRHVPGAEEFSSRLKGRTIGSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G+ +I+ HLGMSG ++ A +H V I T+ + + Sbjct: 61 KYLWLPLDGSDAILAHLGMSGQLLVVEPGSA----PERHLRVRIGFTDG----GPDLRFV 112 Query: 118 DPRRFGFMDLVE---TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + + + + P+ + +P + F+ + + + +K ALL+Q Sbjct: 113 DQRTFGHVLVTAMAHSGGRPVPEPITHIAADPFEEHFDEDLFGRRLRARQTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EALWRA+L R T +L + + +L+ ++V+ A+ GG+ Sbjct: 173 SLISGVGNIYADEALWRARLHGARPTGALTRP------KIAELLGAAREVMAAALSEGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + +VYG+ EPC CG I R RS++ C CQ Sbjct: 227 SFDSLYVNVNGESGYFDRSLAVYGRRDEPC-PRCGAPIIRESFMNRSSYSCPRCQ 280 >gi|290969142|ref|ZP_06560667.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] gi|290780648|gb|EFD93251.1| DNA-formamidopyrimidine glycosylase [Megasphaera genomosp. type_1 str. 28L] Length = 280 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + + ++ N L+ F GK+I + RR KY Sbjct: 1 MPELPEVETVRTHLAPYVVGNRIVQVEVNAPNVLKNTTVPGFRNRVVGKRIEGLVRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L G +++VHL M+G + +P + L + +K ++Y D Sbjct: 61 LQFLLSGEQAVLVHLRMTGKLLYRPALQEEP-------RARLRL----HLQKGLLVYEDV 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG LV + P TLGP+ A +F A YL K +K LL+Q +VAG Sbjct: 110 RTFGGFWLVPKTGPTGVPGYDTLGPDAAGEAFTAAYLRQCLAGKKRMIKALLLDQHVVAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV EAL+ A + P R+ ++ + + KL I +VL + GG+++RD+ Sbjct: 170 LGNIYVDEALFAAHIRPDRQAATISRTE------VGKLHAAIGRVLAQGLAHGGTTIRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G Q+ VYG+ G PC +CG + +GR T YC +CQ+ Sbjct: 224 VDSNGREGTNQSFLQVYGREGMPC-PHCGTRLVYTKVSGRGTRYCPHCQR 272 >gi|333024193|ref|ZP_08452257.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332744045|gb|EGJ74486.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 284 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + H +++R F+A +G+ RR Sbjct: 1 MPELPEVEVVRRGLARWIDGRTVAATEVLHPRSVRRHLAGGEDFAARLKGRTFATPRRRG 60 Query: 58 KYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G +++ HLGMSG +++ + +H V I + T+ + + Sbjct: 61 KYLWLPLDGGAEAVLAHLGMSGQLLVQPHAAPA----ERHLRVRIGFEDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L ET + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHETGEGGVPDVIAHIARDPLDPLFDDAAFHAALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T L + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTAGLTRPRTD------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG I+R RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPIQRDAWMNRSSYYCPKCQR 280 >gi|241661900|ref|YP_002980260.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] gi|240863927|gb|ACS61588.1| formamidopyrimidine-DNA glycosylase [Ralstonia pickettii 12D] Length = 291 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 146/303 (48%), Gaps = 26/303 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + + + + LR+ G + + RR KYL Sbjct: 1 MPELPEVEVTRLGLIPHITERRIVRVVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL 60 Query: 61 LIEL------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LIE +++HLGM+G+ + T+ + H+HV I L T Sbjct: 61 LIECMPEAEQSGGCAETAGGWLLIHLGMTGTLRVLETA----VPPGLHDHVDIELAGATG 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + Y DPRRFG + ++P LR LG EP D F+ ++ + + Sbjct: 117 VP-VTLRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVA 175 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ALL IV G+GNIY E+L+RA + P + + L + I+ L Sbjct: 176 IKSALLAGDIVVGVGNIYCSESLFRAGIRPTTAAGRIGRPR------YAALAEAIRATLA 229 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 DAI GGS+LRD+V DG GYFQ VY + G PC CG +R+IVQ RSTFYC Sbjct: 230 DAIARGGSTLRDFVGSDGQSGYFQLDAFVYDRAGLPC-RVCGTPVRQIVQGQRSTFYCPT 288 Query: 287 CQK 289 CQ+ Sbjct: 289 CQR 291 >gi|93117325|gb|ABE99580.1| fpg [Neisseria meningitidis] Length = 255 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 141/269 (52%), Gaps = 14/269 (5%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + ++ TV + L + LR+ G++++ RRAKYL++ + +++ Sbjct: 1 GIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTG-ILLI 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E + Sbjct: 60 HLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GI 113 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFRA 173 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 GISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQE 227 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 228 YTVYGRHNQPC-PQCGGLVVKETLGQRGT 255 >gi|255020678|ref|ZP_05292740.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254969914|gb|EET27414.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 270 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L ++ T+T + +K LR P + RG+ + + RR KYL Sbjct: 1 MPELPEVEVTRLALAPHLEGQTLTGAVVRQKKLRQWVPPDLDSRLRGRVLNRLDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +++HLGMSGS + A + H+HV I L + + + DPR Sbjct: 61 LADFVHGQ-LLLHLGMSGSLRLLPQDMAATV----HDHVDILLGDGRCLR-----FRDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +P LR LGPEP +F+ L + + +K+ L++ V G+ Sbjct: 111 RFGLILWNTEGA--AHPLLRDLGPEPLAENFSGQVLYRRSRGRQQAVKSFLMDSHTVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA + P R + ++ + + L +AI GG++LRD+ Sbjct: 169 GNIYATESLFRAGIDPRRAAGRISAARYDDLAMVIRTV------LREAIAQGGTTLRDFF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF+ + YG+ GEPC+ CG +R GR+T +C YCQ Sbjct: 223 QPDGGNGYFRLSLQAYGREGEPCI-RCGGTLRGQRLGGRATVFCPYCQ 269 >gi|160914227|ref|ZP_02076448.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] gi|158433854|gb|EDP12143.1| hypothetical protein EUBDOL_00237 [Eubacterium dolichum DSM 3991] Length = 275 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 142/290 (48%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + D + N+ F R KKI R KYL Sbjct: 1 MPELPEVETVVRTLEHQLQQIEIMDCRVLWDNIIAMDTQAFIETIRHKKIQGYHRHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L G+ IVHL M G F ++ A +H HV SL++ + Y+D R Sbjct: 61 MFDL-GSYDFIVHLRMEGKFYVQ----APQEPYDKHTHVIFSLSDGRELR-----YHDTR 110 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG M L +YP +GP+ D A L HKK + LK LL+Q ++AG Sbjct: 111 KFGKMVLYPKLENYQEYPCFAHIGPDAFDEELCADSLYRMLHKKKTYLKAVLLDQSVMAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + ++ P K L + + LI E +++L AI AGG+++R Y Sbjct: 171 IGNIYADEICYAMRMHPETKISHLRKKDFAV------LITETRRILSGAIRAGGTTIRSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + GE C NC I++I AGR T+YC CQK Sbjct: 225 TSSLGVDGRFQLKLKVHARKGEAC-PNCQGEIKKITVAGRGTYYCPTCQK 273 >gi|158335652|ref|YP_001516824.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] gi|189044582|sp|B0C5D4|FPG_ACAM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158305893|gb|ABW27510.1| formamidopyrimidine-DNA glycosylase [Acaryochloris marina MBIC11017] Length = 284 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 92/297 (30%), Positives = 135/297 (45%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L V M + + P F + + RR K Sbjct: 1 MPELPEVETVRLGLEKVTVGMQIMGGEVLYPRTIAHPQSPQVFIQGLQDATFLSWMRRGK 60 Query: 59 YLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL +L + + VHL M+G + A+ +H V + NN + Sbjct: 61 YLLSQLSFSTQQPSGWLGVHLRMTGQLLWV----AQDEPVQKHTRVRLFFVNNRELR--- 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG M V + + L+ LGPEP F+ Y + ++K+AL Sbjct: 114 --FVDQRTFGQMWWVAPTEDPKQVISGLQKLGPEPFSEEFSVDYFWESLQGRKRSIKSAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY EAL+ +++ P L + + +L I +VL +I A Sbjct: 172 LDQALVAGVGNIYADEALFMSEIRPTTACHQL------QTEQVQRLRTAIIEVLSTSIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+ G+PC CGQ I RI GRST +C CQ Sbjct: 226 GGTTFSDFRDLKGVNGNYGGMAWVYGRQGQPC-RTCGQTIERIKLVGRSTHFCPQCQ 281 >gi|254822110|ref|ZP_05227111.1| formamidopyrimidine-DNA glycosylase [Mycobacterium intracellulare ATCC 13950] Length = 282 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H +A +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGAADLTARLLNDRITGTDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWLLLDSDAALVVHLGMSGQMLLGAV--------PRADHVRISALLDDGTV---LSFA 109 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLVE P+ L +P D F+A + +K+S +K LL+Q Sbjct: 110 DQRTFGGWMLADLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG+ Sbjct: 170 QVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGQGC-RRCGAVMRREKFMNRSSFYCPKCQ 277 >gi|157804064|ref|YP_001492613.1| formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] gi|166198742|sp|A8EZP5|FPG_RICCK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157785327|gb|ABV73828.1| Formamidopyrimidine-DNA glycosidase [Rickettsia canadensis str. McKiel] Length = 273 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +L + + + +I L R NLR++ + I++V RRAKYL Sbjct: 1 MPELPEVETLKNSLKDKLIGLIIKNIELKRDNLRYNLSPLLTTEILNTNILNVRRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+ S+++HLGMSG F ++ + K +H+HV L N ++I+ND R Sbjct: 61 IIDFGNYYSLVIHLGMSGRFTVQPAN----YKIQKHDHVIFDLNNCE-----KLIFNDTR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +T+ + LG EP + YL + + +KN +++ KI+ G+ Sbjct: 112 RFGMVYSFKTNFLEE-KFFYNLGIEPLSDLLTLEYLKSKLITRTIAIKNLIMDNKIIVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E+L A++ P + R+L D + LI+ I++VL AI AGG++L+++V Sbjct: 171 GNLYASESLHLARIHPHKLGRNLKD------DEIENLIKSIREVLTKAITAGGTTLKNFV 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF VYG+ G+ C NC I + +GRSTFYC CQ Sbjct: 225 NGDSKPGYFTQQLRVYGREGQKCF-NCSSTILKTKNSGRSTFYCKTCQ 271 >gi|78222421|ref|YP_384168.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] gi|90101303|sp|Q39WD1|FPG_GEOMG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78193676|gb|ABB31443.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Geobacter metallireducens GS-15] Length = 267 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + + + + LRF P + G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERELTGKRIDRVVVRTPKLRFPIPQELHVSLPGRTVRSVGRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + E +IVHLGM+G + + +H+H+ I + T + ++DPR Sbjct: 61 LFDCETG-WLIVHLGMTGFLRLVAGTAP----PGKHDHLDIVFADGTVLR-----FHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T +P L +GPEP +F+ YL + +K L+N IVAG+ Sbjct: 111 KFGTVAW-TTDAPATHPLLAAIGPEPLTATFDGAYLFAVTRTRRVAVKQLLMNAAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL + +L + +++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRPASSLGRPE------CERLARTVREVLQESIDQGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ Y F VYG+ + C + CG + I RST +C CQ Sbjct: 220 VEEETVAYHPLNFDVYGRGTDAC-TRCGGALEEIRLGNRSTVFCPRCQ 266 >gi|328885313|emb|CCA58552.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 286 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ + P F+A G++ RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVTEVEVLHPRAVRRHPAGGADFAARLTGQRFEVARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L E S++ HLGMSG +++ A + +H + I ++ T+ + + Sbjct: 61 KYLWLPLAESGTSVLGHLGMSGQLLVQPEGAA----DEKHLRIRIRFDDSAGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDQTPAGLPDVIGHIARDPLDPEFDDAAFQSALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYDRPTATLTRPRS------AELLGHIRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 280 >gi|13357975|ref|NP_078249.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762015|ref|YP_001752497.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|183508489|ref|ZP_02958019.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|24211711|sp|Q9PQ76|FPG_UREPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|11264463|pir||B82895 formamidopyrimidine-DNA glycosylase UU413 [imported] - Ureaplasma urealyticum gi|6899401|gb|AAF30824.1|AE002138_11 formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827592|gb|ACA32854.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675912|gb|EDT87817.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 275 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYEQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L N K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKN------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|266618595|pdb|3GPX|A Chain A, Sequence-Matched Mutm Interrogation Complex 4 (Ic4) gi|266618601|pdb|3GQ3|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec5-Loop Deletion Complex Length = 257 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGG------ 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 219 ----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|330466267|ref|YP_004404010.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] gi|328809238|gb|AEB43410.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Verrucosispora maris AB-18-032] Length = 285 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 147/292 (50%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + +R HF+ G+ ++DV RR Sbjct: 1 MPELPEVETVRQGLARWVTGRRIESVEVRHPRAVRRHVAGGAHFADVLAGRTVLDVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ + + H V T++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPATAPE----EPHLRVRFRFTDD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + E + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSEGGATL-PAEIAHIARDPLDPQFSDADFVTAMRRRRTEVKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA L R T +L + +L+ ++ VL +AI AGG+S Sbjct: 172 SGVGNIYADEALWRAGLHGTRPTDALTGP------AVRRLLGHVRDVLTEAITAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + +VYG+ G+PC CG IRR RS++ C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLNVYGREGQPC-RRCGAPIRREAFMNRSSYSCPRCQ 276 >gi|145637250|ref|ZP_01792911.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269502|gb|EDK09444.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 251 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 96/270 (35%), Positives = 142/270 (52%), Gaps = 20/270 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +KN T+ + + + LR+ + KI+D++RRAKYL Sbjct: 1 MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELIT-LKNVKIVDLTRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I E II HLGMSGS I A +H+H+ I + N + YNDPR Sbjct: 60 IIHTEKGY-IIGHLGMSGSVRIVPQDSAID----KHDHIDIVMNNGK-----LLRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + LGPEP + FNA YL + +K++ LK L++ +V G+ Sbjct: 110 RFGA--WLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQKSTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + P++ ++L +N + L+ I+ VL AI GG++L+D++ Sbjct: 168 GNIYANESLFICGIHPLKLAKNLTRNQ------CFSLVNTIKDVLRKAIIQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 DG GYF VYG +PC CG+ Sbjct: 222 QPDGRPGYFAQELLVYGNKDKPC-PKCGRK 250 >gi|119713191|gb|ABL97259.1| putative formamidopyrimidine-DNA glycosylase [uncultured marine bacterium EB0_50A10] Length = 269 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 159/288 (55%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + KN +++I +H +NLR+ ++ + I ++ RRAKY+ Sbjct: 1 MPELPEVETTLRAIEKF-KNQRLSNIKVHNRNLRWKVDKDLEINSKNQIIKNLRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ SII+HLGMSGS I + + +H+HV N +IYNDPR Sbjct: 60 IFDLDK-CSIILHLGMSGSLRIANNDDNYFL---KHDHVEFLFDNEK------IIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T ++ + LGPEP FN+ YL + +N+K L+NQK V GI Sbjct: 110 RFGSIHL--TEDIDKHRLINHLGPEPLSKEFNSKYLLALCSRSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +K++P++ + L D K+++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLYLSKVNPLKDSSKLT------IDDCKKVVRSSKKILDAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ +VYG+ G C C I + R+T+YC+ CQ Sbjct: 222 SADGSPGYFKFKLNVYGREGLDC-KRCKTKIAKTNINKRATYYCSSCQ 268 >gi|282898822|ref|ZP_06306809.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] gi|281196349|gb|EFA71259.1| Formamidopyrimidine-DNA glycolase [Cylindrospermopsis raciborskii CS-505] Length = 277 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + +T ++ L R F +G I R K Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITSGEVLLARTVAYPFAADQFIGGLKGSTIESWIRCGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL EL + + VHL M+G + + P H H + L K+ + + D Sbjct: 61 YLLAELSSSAWLGVHLRMTGQLLWLSQ------EEPLHKHTRVRLFFG---KEQELRFVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M + + + + L L +P F YL + K +K ALL+Q I Sbjct: 112 QRTFGKMWYIPSGVVREKIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P ++ +N + L I +VL +I AGG++ Sbjct: 172 VAGLGNIYADEALFKSGILPTTICTNIGENQ------IRSLRMAIIEVLSASIAAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|148652194|ref|YP_001279287.1| formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] gi|148571278|gb|ABQ93337.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter sp. PRwf-1] Length = 307 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 47/319 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++K V + +++ LR+ P +G + V RRAKYL Sbjct: 1 MPELPEVETTKTSLKPLLK-KQVAQVDVYQPKLRWPVPDDIH-RLQGYTLQQVERRAKYL 58 Query: 61 LIELE--------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 +++ + SII+HLGMSGS K +H+H+ + + Sbjct: 59 ILQFQRLPSQSGAKTANMPDTKSIIIHLGMSGSLQQFPVGTDK----RKHDHLIMQYKAD 114 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---- 162 ++ Y+DPRRFG + + Y LG EP D+ F+ YL + H+ Sbjct: 115 DTKPAIQLHYHDPRRFGAILWFD---DYAEKLFDHLGIEPLDDQFSGDYLFDKIHRVAEN 171 Query: 163 -------------KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + +K +++Q++V G+GNIY E+L+ + + PI L + Sbjct: 172 AIRSCHNKPLLKPISRPIKAVIMDQEVVVGVGNIYATESLFLSGIHPITPADQLSKVQ-- 229 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 L +L++ I+++L +I GGS+L+D+ G+ GYFQ VYGK PC CG Sbjct: 230 ----LAELVKYIKEILKRSITQGGSTLKDFTVASGTTGYFQQTLLVYGKYKSPC-PTCGA 284 Query: 270 MIRRIVQAGRSTFYCTYCQ 288 I ++V GR++ +C CQ Sbjct: 285 GIDKVVITGRASTFCPTCQ 303 >gi|17231812|ref|NP_488360.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] gi|24211709|sp|Q8YP80|FPG_ANASP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|17133456|dbj|BAB76019.1| formamidopyrimidine-DNA glycosylase [Nostoc sp. PCC 7120] Length = 283 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 136/298 (45%), Gaps = 26/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ LHR F G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRTIAHPFSVGDFLNGITGSTISTWHRRGK 60 Query: 59 YLLIELEGNL------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YLL EL + + VHL M+G + + +H V I + Sbjct: 61 YLLAELSASPSTTSIPWLGVHLRMTGQLLWLNQDEPLH----KHTRVRIFFEEEQELR-- 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG M V + + L L +P F YL ++ H + +K A Sbjct: 115 ---FVDQRTFGQMWWVPPGIAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +VAG+GNIY EAL+++ + P + + L I +VL +I+ Sbjct: 172 LLDQSVVAGLGNIYADEALFKSGVLPETLCTEVQLKQ------IKLLRTAIIQVLETSIE 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG++ +++++ G G + VY + GEPC CG +I+RI GRS+ +C CQ Sbjct: 226 AGGTTFSNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFCRQCQ 282 >gi|257454005|ref|ZP_05619279.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] gi|257448483|gb|EEV23452.1| formamidopyrimidine-DNA glycosylase [Enhydrobacter aerosaccus SK60] Length = 296 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ +L ++ N TV + + + LR+ P + ++ID+ RRAKYL Sbjct: 1 MPELPEVQTTATSLQPLL-NQTVEKVSVFQPKLRWVVPDDLVS-LIDYQLIDIERRAKYL 58 Query: 61 LIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ +G + +++HLGMSGS K +H+HV ++ + ++ Y+ Sbjct: 59 ILTFKGGAAQKKLLIHLGMSGSLQQHPVGFDK----RKHDHVILTFNDGKKLT--QLHYH 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN----SNLKNALLN 173 DPRRFG + ++ Y+ + LG EP F+A YL H H + +K+ ++ Sbjct: 113 DPRRFGMLLWLD---DYEDKLITHLGVEPLSEDFSADYLYHHIHNRKKPIERPIKSVIMA 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q+IV G+GNIY E+L+ +K+ P+ + L L+ I++VL +I+ GG Sbjct: 170 QEIVVGVGNIYATESLFLSKIHPLTPAHLIGHEQ------LTTLVAHIRQVLQTSIEKGG 223 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S+L+D+ DG GYFQ VYG G C +CG I + R++ +C CQ Sbjct: 224 STLKDFTVADGQTGYFQQTLLVYGHKGADC-PSCGTTIDNVKINQRASTFCPTCQ 277 >gi|298492017|ref|YP_003722194.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] gi|298233935|gb|ADI65071.1| formamidopyrimidine-DNA glycosylase ['Nostoc azollae' 0708] Length = 278 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 144/294 (48%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + +T DI L R + F +G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNEGITGGDILLKRTVAYPFYVSEFIDNLKGSSIKSWHRRGK 60 Query: 59 YLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL EL + + + VHL M+G + + + P H H + L +K + + Sbjct: 61 YLLAELTPSSTCLGVHLRMTGQLLWLNQN------EPLHKHTRVRLFFG---EKQELRFV 111 Query: 118 DPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG M V + + L L +P F YL ++ K +K ALL+Q Sbjct: 112 DQRTFGQMWYVPPGVPVESIIRGLAQLAVDPFSPEFTVEYLANKLQKGRRPIKTALLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IVAG+GNIY EAL+++ + P L + P L I KVL +I AGG++ Sbjct: 172 IVAGLGNIYADEALFKSGILPTTLCTDLQKKQVEP------LRTAIIKVLSASIAAGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++++ G G + VY +TG+PC CG +I+RI GRS+ +C+ CQK Sbjct: 226 FSNFLNVKGINGNYGGEAWVYKRTGKPC-KVCGNVIQRIKLGGRSSHFCSQCQK 278 >gi|93005206|ref|YP_579643.1| formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] gi|92392884|gb|ABE74159.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter cryohalolentis K5] Length = 307 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 50/321 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + S + V RRAKYL Sbjct: 1 MPELPEVETTKTSLTPLL-GQKVTNVQVFQPKLRWSMPDNLSD-LIDYTLDSVERRAKYL 58 Query: 61 LIEL----EGNLS------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 ++ + +S +++HLGMSGS H + K +H+H+ +S Sbjct: 59 ILNFIPLADDGISSSVEPRNLQPKQLLIHLGMSGSLQQHHHTSDK----RKHDHLIMSFI 114 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 +T+ ++ Y DPRRFG + +E Y L LGPEP + F A YL + + Sbjct: 115 GADDTQT-QLHYYDPRRFGSILWLE---DYGDKLLNHLGPEPLSDDFTADYLYYLIQRSE 170 Query: 165 -----------------SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +K+ ++ Q+ V G+GNIY E+L+ + + P + Sbjct: 171 QSIQTQSSKVIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPANKIS--- 227 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 D + L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ GE C +C Sbjct: 228 ---YDQIVILVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGETC-PHC 283 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 ++ I GR++ YC CQ Sbjct: 284 DSVLENIKLNGRASVYCPVCQ 304 >gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 276 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 144/291 (49%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + N+T+ D + N+ + P F A +GK I R KY Sbjct: 1 MPELPEVETVVRTLEHQLGNVTIKDCHVLWDNIIAYPTPQTFCAQIKGKTIQHYERYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL +L G++ I H+ M G F I+ + +H HV L + + Y+D Sbjct: 61 LLFDL-GSMMWIAHMRMEGKFYIQKSDEPYD----KHVHVLFDLQDGRQLR-----YHDT 110 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L E +QYP + +G + D YL H HK+ LK ALL+Q ++A Sbjct: 111 RKFGKMYLYEKRKDIHQYPCFQNIGLDAFDERLTPTYLYHALHKRKIVLKAALLDQSVIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + + P K L + + +L+QE +++L AI GG+++R Sbjct: 171 GIGNIYADEICFALGMHPETKIYHLRKKD------FERLLQETRRILQGAIRYGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C C I++I A R T YC CQ+ Sbjct: 225 YTSSLGVDGRFQLKLKVHAKKGEKC-PVCQGEIKKITVATRGTCYCPTCQR 274 >gi|126657399|ref|ZP_01728558.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] gi|126621386|gb|EAZ92098.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. CCY0110] Length = 278 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + TV + L R F + R+ K Sbjct: 1 MPELPEVETVCRGLNQLTFGQTVRGGKVLLPRTLAYPVSTQEFLEQIQNATFGQWQRKGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL+ LE + + VHL M+G + P H + L + + + + Sbjct: 61 YLLVPLEDDKGWLGVHLRMTGQLLWVQQD------EPLSRHTRLRLFCD---RSQELRFV 111 Query: 118 DPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + V T + L+ LGPEP +F+ Y + + N+K LL+Q Sbjct: 112 DIRTFGKVWWVPPHTPPETIITGLQKLGPEPFSKAFSLDYFRDKLKGRQRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY EAL+++ + P + L Q + +L + +VL AI GG++ Sbjct: 172 VVAGMGNIYADEALFKSGIRPTTLGKELSQPQ------IKELRIVMIEVLKTAIKEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+ + G G + VYG+ +PC CG I RI GRS+ +C CQ+ Sbjct: 226 FSDFRGVTGINGNYSGIAWVYGRHNQPC-RVCGTPIERIKLGGRSSHFCPQCQQ 278 >gi|172040469|ref|YP_001800183.1| hypothetical protein cur_0789 [Corynebacterium urealyticum DSM 7109] gi|238066642|sp|B1VG60|FPG_CORU7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171851773|emb|CAQ04749.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 289 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 21/298 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + D+ + P A G +I + RR Sbjct: 1 MPELPEVEVVRRGLEEHLSDGVIHDVDVRHPRAVRAQPGGAAELVALLDGARIQSIERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KY+ + L ++ VHLGMSG +I S HV IS + K + + Sbjct: 61 KYMWLVLNNGRALFVHLGMSGQMLIHEASDPAL----PTTHVRISARVDVGEKDLVLSFV 116 Query: 118 DPRRFGFMDLVETSLKYQYP------PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 D R FG + P+ + P+P + F+ + + K +++K A+ Sbjct: 117 DQRTFGQWQVTPVVADPHGGFTGVPVPVAHIAPDPFEAVFDPAVVARRLRAKKTDVKRAI 176 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+GIGNIY EALW A ++P R+TR + Q + ++++ V+ A+ Sbjct: 177 LDQTLVSGIGNIYADEALWAAGVAPSRRTRGMRQRDAV------AVLEQAGAVMRRALAQ 230 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G+ GYF + + YG+ G+PC CG+ I R+ RS+ +C CQ Sbjct: 231 GGTSFDSLYVNVNGASGYFARSLNAYGRAGKPC-PRCGEPIVRVQWTNRSSHFCPQCQ 287 >gi|256379956|ref|YP_003103616.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] gi|255924259|gb|ACU39770.1| formamidopyrimidine-DNA glycosylase [Actinosynnema mirum DSM 43827] Length = 291 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + + H + +R P F+ G+++ RR Sbjct: 1 MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL ++L G +++ HLGMSG +++ + +H V + ++ + + Sbjct: 61 KYLWVDLSGGEAVLAHLGMSGQMLVQPVGAP----DEKHLRVRVVFEDD----GPELRFV 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG +LVE + + + +P D F+A + +++K ALL+Q Sbjct: 113 DQRTFGGLALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY E+LWRA+L +R T L +L+ +V+++A+ GG+ Sbjct: 173 TLVSGVGNIYADESLWRARLHGLRPTAKLTTAKT------AELLGHATQVMLEALGQGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + +VYG+ PC CG I R RS++ C CQ Sbjct: 227 SFDALYVNVNGQSGYFDRSLAVYGQEDRPCA-RCGTAIVREPFMNRSSYSCPRCQ 280 >gi|119509416|ref|ZP_01628564.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] gi|119465822|gb|EAW46711.1| formamidopyrimidine-DNA glycosylase [Nodularia spumigena CCY9414] Length = 280 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 138/295 (46%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L + + +T D+ L R F+ G I RR K Sbjct: 1 MPELPEVETIRRGLNQLTLHQKITGGDVLLDRTIAYPLSVDKFTPKIIGSAIASWHRRGK 60 Query: 59 YLLIELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 YLL EL + + VHL M+G + + + P H H + L + + Sbjct: 61 YLLAELTPSPQTHWLGVHLRMTGQLLWVNQN------EPLHKHTRVRLFFGDEQE---LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG M V + + L L +P F YL + + +K ALL+ Sbjct: 112 FVDQRTFGQMWWVPPGVAVETIMTGLAKLAVDPFSPEFTVEYLASKLQNRRRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY EAL+++ + P+ L + + L I +VL +I AGG Sbjct: 172 QSVVAGLGNIYADEALFKSGILPVTLCIDL------QLEQIQSLHTTIIQVLETSIAAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +++++ G G + VY ++GEPC C I+RI AGRS+ +C CQ Sbjct: 226 TTFSNFLNVQGVNGNYGGVAWVYNRSGEPC-RVCSTPIQRIKLAGRSSHFCPQCQ 279 >gi|293376465|ref|ZP_06622694.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325842052|ref|ZP_08167589.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] gi|292644887|gb|EFF62968.1| DNA-formamidopyrimidine glycosylase [Turicibacter sanguinis PC909] gi|325489774|gb|EGC92130.1| DNA-formamidopyrimidine glycosylase [Turicibacter sp. HGF1] Length = 277 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L +K + + +I L ++ F + I ++SRR KY Sbjct: 1 MPELPEVETVKNVLNSQIKGLRIKEIELRYEPMVKNMSADVFKEKLTNQVIEEISRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + ++ HL M G + E +H H L N +++Y D Sbjct: 61 LVFHF-QDYQLLSHLRMEGKYFYEADDFELN----KHIHAIFKLDNGR-----QLLYQDT 110 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG L E + + LG EP + F Y+ + K +K+ LL+Q +V Sbjct: 111 RKFGTFHLYEKGQDLEETSAFKVLGVEPFSDEFTPAYVKGKIKGKKKPIKSLLLDQSVVC 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+RAK+ P+ + L N + +++ +VL AI GG+++R Sbjct: 171 GLGNIYVDEVLFRAKIHPLTPSYELSDNE------IENVVKYTVEVLAKAISLGGTTIRT 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ V+ + GE C C I +I GR T++C CQ Sbjct: 225 FTSTHGVSGTFQEELLVHQRLGEVC-KICETPIEKIKVGGRGTYFCPTCQ 273 >gi|186701833|ref|ZP_02971501.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701121|gb|EDU19403.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 275 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL + K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L N K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKN------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|171920356|ref|ZP_02931689.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902783|gb|EDT49072.1| formamidopyrimidine-DNA glycosylase [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 275 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 142/289 (49%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + ++ + +H K L+ P F KI+ + R KY Sbjct: 1 MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L NL + VHL M G F + + N H H+ I N ++ YND Sbjct: 61 LLFFLSNNLVLSVHLRMEGKFYYQ---AKEEWFNLAHTHIIIEFNNG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L+ + +P DN+F+A YL +F K N +K ALL+Q +V+G Sbjct: 113 RQFGTFHIYQQQSFLDSKELKKIALDPLDNNFSAQYLYEKFKKSNKAIKTALLDQSVVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ AK+ P ++L + K+ +E Q++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFAAKIFPTILAKNLTLKD------YEKITKEAQRILLLSIKNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ EPC CG +I++ GR T+YC CQ Sbjct: 227 KFGNDETGLFQKMLLVHTHAKEPCQ-ICGTIIQKTKVNGRGTYYCPNCQ 274 >gi|281307047|pdb|3GO8|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-Loop Deletion Complex Length = 257 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 137/290 (47%), Gaps = 35/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG+ Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGN----- 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 220 -----------HHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257 >gi|326330625|ref|ZP_08196929.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951466|gb|EGD43502.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 289 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + + + + H + +R F+ +G+ + RR Sbjct: 1 MPELPEVEVVRAGLERHVLGARIVAVDVLHPRPVRRHLAGASAFADELKGRVLTGARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ + + +H V I L ++ R + Sbjct: 61 KYLWLPLDSGDALMAHLGMSGQMLVQPPASP----DERHLRVRIRLEGAAEGRELR--FV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + P + + P+P + +F+A + + S +K LLNQ ++ Sbjct: 115 DQRMFGGLSISPGGAEL-PPEIAHIAPDPLEAAFDAEAVVRWVRRSASGIKRILLNQTVI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL R L + +L+ + V+ +A+ GG+S Sbjct: 174 SGVGNIYADEALWRAKLHGERPGERLT------APKVRELLGHVHDVMTEALAQGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ + + YG+ GEPC CG +RRI RS+++C CQ Sbjct: 228 ALYVNVNGESGYFERSLAAYGREGEPCD-RCGAPMRRIAFMNRSSYFCPTCQ 278 >gi|159036824|ref|YP_001536077.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] gi|189044672|sp|A8M661|FPG_SALAI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157915659|gb|ABV97086.1| formamidopyrimidine-DNA glycosylase [Salinispora arenicola CNS-205] Length = 287 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + ++ + P HF+ G + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++I HLGMSG +++ + + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVIGHLGMSGQLLLQPGAAP----DEAHLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLSVSAGGAEM-PTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQTLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R L +L+ ++ VL +AI GG+S Sbjct: 172 SGVGNIYADEALWRARLHGARPADGLTGPAAL------RLLGHVRDVLGEAIKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG +RR RS++ C CQ Sbjct: 226 ALYVNVNGESGYFDRALNVYGRADQPC-RRCGTPVRREAFMNRSSYSCPRCQ 276 >gi|75907494|ref|YP_321790.1| formamidopyrimidine-DNA glycosylase [Anabaena variabilis ATCC 29413] gi|123610190|sp|Q3MDP1|FPG_ANAVT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|75701219|gb|ABA20895.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anabaena variabilis ATCC 29413] Length = 277 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 135/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ LHR F G I RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNRKITGGDVLLHRTIAHPFSVGDFLNGITGDSISAWHRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL + VHL M+G + + +H V I + + + D Sbjct: 61 YLLASTTSAAWLGVHLRMTGQLLWLNQDEPLH----KHTRVRIFFEDQQELR-----FVD 111 Query: 119 PRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M V + + + L L +P F YL ++ H + +K ALL+Q + Sbjct: 112 QRTFGQMWWVSSGMAVESVITGLAKLAVDPFSPEFTVEYLANKLHNRRRPIKTALLDQSV 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P + + L I +VL +I+AGG++ Sbjct: 172 VAGLGNIYADEALFKSGVLPETLCTEVQLKQ------IELLRTAIIQVLETSIEAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + GEPC CG +I+RI GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGVAWVYNRAGEPC-KVCGDVIQRIKLGGRSSHFCRQCQ 276 >gi|297180061|gb|ADI16286.1| formamidopyrimidine-DNA glycosylase [uncultured bacterium HF0010_16H03] Length = 269 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + N + I +H +NLR+ + +R + + + RRAKY+ Sbjct: 1 MPELPEVETTLRAIDKF-TNQRIKSIKVHNRNLRWKVDKNLETISRNQLVKALRRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL+ + S+I+HLGMSGS I + S I +H+H+ N +IYNDPR Sbjct: 60 IFELDTS-SLILHLGMSGSLRISNVSDNYFI---KHDHIEFIFDNEK------IIYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + TS + +R LG EP FN +YL K +N+K L+NQK V GI Sbjct: 110 RFGSLHI--TSNVDTHNLIRNLGAEPLSKDFNGVYLFDLCSKSKTNIKTLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L ++++P R ++ K++ +K+L AI GG++L+D+ Sbjct: 168 GNIYASETLHLSRINPRRLACNISLQE------CKKIVSSSKKILKAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF A VYG+ G C C I++I R+T+YC CQ Sbjct: 222 SADGSPGYFNFALKVYGREGLQC-KVCDDKIKKINLNTRATYYCDNCQ 268 >gi|121999089|ref|YP_001003876.1| formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] gi|166215627|sp|A1WZG2|FPG_HALHL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|121590494|gb|ABM63074.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Halorhodospira halophila SL1] Length = 270 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 147/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + + T+ + + ++ LR+ P AA G++++ + RRAKYL Sbjct: 1 MPELPEVETTRRGLQVHLVGRTLQRVVVRQRQLRYPVPARVEAAVVGEEVVALERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L G +++HLGMSGS + A+ +H+HV + L + V DPR Sbjct: 61 LIRLGGGAWLLLHLGMSGSLRLV----AETDAPGRHDHVDLVLNDGR-----AVRLTDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG L+ + LR LGPEP ++F+ L + +K L++ +V G+ Sbjct: 112 RFG-CLLLGDGDPQDHRLLRRLGPEPLGSAFDGAVLHRAARGRRVAVKALLMDATVVVGV 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P + +L ++ VL A+ AGG++LRD+ Sbjct: 171 GNIYANEALFRAGIRPD------RAAGRIARARYDRLAGAVRAVLEAALAAGGTTLRDFT 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G GYF SVY G CG +R+I A R T++C CQ+ Sbjct: 225 DGSGEPGYFAVNLSVY---GASVCPVCGGALRQIRLAQRGTWFCPRCQR 270 >gi|93117323|gb|ABE99579.1| fpg [Neisseria meningitidis] Length = 258 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 14/270 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTG-ILL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 ++VYG+ +PC CG ++ + R T Sbjct: 230 EYTVYGRHNQPC-PQCGGLVVKETLGQRGT 258 >gi|302342357|ref|YP_003806886.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] gi|301638970|gb|ADK84292.1| formamidopyrimidine-DNA glycosylase [Desulfarculus baarsii DSM 2075] Length = 272 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + ++ F+ GK I +R K L Sbjct: 1 MPELPEVECVRRTLEPAVLGRAIVAVQINYAKAVLPDARAFADGLGGKSITATARHGKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ + +HL M+G I+ + H H I L + + + Y D R Sbjct: 61 ILGLDQGAFMTIHLRMTGQVIVADQAPQA-----DHIHARIDLDDGQS-----LFYRDMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ + Q PL +GP+ + A + LKN LL+Q+++AG+ Sbjct: 111 KFGRLNYCPDAQALQNGPLANMGPDALE--LEAEAFATLVGARGGKLKNVLLDQRVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA LSP L D L +L + +++ L++A++ GGSS+R+++ Sbjct: 169 GNIYADESLHRAGLSP------LADPRALSADDLDRLHRALRQTLLEALEQGGSSVRNFM 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ++ VY +TG+PC CGQ + RIV AGR T +C CQ Sbjct: 223 DAHGRAGTFQHSHRVYRRTGQPC-PVCGQPVERIVVAGRGTHFCPACQ 269 >gi|297180566|gb|ADI16778.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_11B23] Length = 270 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 99/284 (34%), Positives = 158/284 (55%), Gaps = 19/284 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + N ++ I + LR F + +I D+ RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISNQSIKKILVRNNKLRIPFNKKLAKEITNIEISDIKRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ SI++HLGM+G+ + +K IK +H+H+ L++ +IYND R Sbjct: 61 IVDFANGYSIVIHLGMTGNLRV-----SKKIKYLKHDHIIFYLSSGNV-----LIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + T+ + L GP+P + NA YL ++ K +++K+ LLN K+++GI Sbjct: 111 RFGLIQIYRTNE--SFFLLDNNGPDPFEKEANADYLFNKIKKSTASIKSILLNHKVISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ +SP R + + D K++QE +K+L AI AGG++L DY Sbjct: 169 GNIYASEILFATNISPTRLGKDVS------YDECKKILQESKKILSKAIKAGGTTLNDYF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + + GYF+ VYG+ G+ C S C I +I Q+ RST++C Sbjct: 223 NAESKPGYFKIQLKVYGRDGQKC-SKCESNILKITQSNRSTYFC 265 >gi|309792770|ref|ZP_07687214.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] gi|308225180|gb|EFO78964.1| formamidopyrimidine-DNA glycosylase [Oscillochloris trichoides DG6] Length = 275 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEI+ R+L + + + + + F A G+ I+ V RRAK Sbjct: 1 MPELPEVEIVARSLAAQVVGRKIVMLEKLDWERMVETPDLPDFCALLIGRTILGVGRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LLI+L+ ++ VHL MSG+ I+ + QH H+ + L + R+ + D Sbjct: 61 WLLIQLDAGWTLAVHLRMSGNLIVYGPAQPVD----QHTHLVLGLDDGR-----RIFFTD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG + L++ + GPEP D+ F + +L ++ + LK LL+Q +A Sbjct: 112 ARKFGRLRLLDPAGIAHLD--AAYGPEPLDSHFTSSHLAALLAQRRTKLKPLLLDQGFIA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW A+L P+ TP + L IQ+VL AI GSSLR+ Sbjct: 170 GLGNIYANEALWIAQLHPLLPANQ------TPAQHVPALHAAIQQVLHTAIQNQGSSLRN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G G+ Q F VY + +PC C I RIV RSTF+C CQ+ Sbjct: 224 YRNSYGEAGHNQEHFHVYDRAAQPC-ERCSTAINRIVVGQRSTFFCPQCQR 273 >gi|71064918|ref|YP_263645.1| formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] gi|90101313|sp|Q4FUU7|FPG_PSYA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71037903|gb|AAZ18211.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Psychrobacter arcticus 273-4] Length = 309 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 50/321 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ VT++ + + LR+ P + A + V RRAKYL Sbjct: 1 MPELPEVETTKTSLAPLL-GQKVTNVQVFQPKLRWSIPDNL-ADLVDYTLDSVERRAKYL 58 Query: 61 LIEL----EGNLS------------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 ++ + +S ++VHLGMSGS + + K +H+H+ +S Sbjct: 59 ILNFIPLADDGISSTVQPRNLQPRQLLVHLGMSGSLQQHNHASDK----RKHDHLIMSF- 113 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 ++ + ++ Y DPRRFG + +E +Y L LGPEP ++F A YL H + Sbjct: 114 IGADSTQTQLHYYDPRRFGSILWLE---EYGDKLLNHLGPEPLSDAFTADYLYHLIQRSR 170 Query: 165 -----------------SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +K+ ++ Q+ V G+GNIY E+L+ + + P + Sbjct: 171 QSIQTQNSKSIKKQPIKRAIKSVIMEQQAVVGVGNIYATESLYLSGIHPATPANEVSYAQ 230 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 + L+ I+ +L AI GGS+LRD+ DG GYFQ +VYG+ G C +C Sbjct: 231 ------IVILVAHIKTILQKAIKLGGSTLRDFTVADGQTGYFQQTLNVYGRQGNAC-PHC 283 Query: 268 GQMIRRIVQAGRSTFYCTYCQ 288 + I GR++ YC CQ Sbjct: 284 ESTLENIKLNGRASVYCPLCQ 304 >gi|117928780|ref|YP_873331.1| formamidopyrimidine-DNA glycosylase [Acidothermus cellulolyticus 11B] gi|166215603|sp|A0LV85|FPG_ACIC1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|117649243|gb|ABK53345.1| DNA-(apurinic or apyrimidinic site) lyase [Acidothermus cellulolyticus 11B] Length = 284 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + + + F+ G++I V RR Sbjct: 1 MPELPEVETIRRGLARHLVGRRIGYAEVFHPRAVRRHSGGAADFTGRLIGRRIQAVLRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +L+++ HLGMSG F++ + +P+H + T+ + + Sbjct: 61 KYLWFALDSDLALLAHLGMSGQFLLADAASP----SPKHLRARFAFTDGDP----ELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + L + + P+ D +F+ +F ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLTLAPLIADV-PASISHIAPDILDVAFDEAEFHRRFTQRRTGVKRALLDQTLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L T + +L+ ++ V A+ AGG+S Sbjct: 172 SGVGNIYADEALWRARLHYATPTVDISAA------TCRRLLAALRAVFRAALRAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G G+F + +VYG+ G+PC CG I R RS+F C CQ Sbjct: 226 ALYVNVNGQSGFFDRSLAVYGRAGQPC-RRCGTAIVREPFMNRSSFRCPACQ 276 >gi|148244469|ref|YP_001219163.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] gi|166198755|sp|A5CX90|FPG_VESOH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146326296|dbj|BAF61439.1| formamidopyrimidine-DNA glycosylase [Candidatus Vesicomyosocius okutanii HA] Length = 269 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 110/288 (38%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E I+R L ++ N V LHR+NLR+ P H S + I + RR KYL Sbjct: 1 MPELPEIETIKRGLTSLIINQKVNKAILHRENLRWVIPKHLSTTLTNQLISTIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ + ++I+HLGMSGS + +T+ +H H + L N T+ + DPR Sbjct: 61 LIKFKVG-TLIIHLGMSGSIKVVNTNTPLL----KHEHFELQLKNGTSMR-----LKDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + + L +LG EP SF YL + K N+K +++ KIV G+ Sbjct: 111 RFGAVLFSKDG---SHKLLDSLGVEPLKTSFYDGYLYQKSRNKQQNIKAFIMDNKIVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE+L+ A ++P K S+ K L Q I+ +L AI+AGG++L+D+V Sbjct: 168 GNIYACESLFMAGINPKLKAGSIS------KTRYNVLTQCIKNILTQAIEAGGTTLQDFV 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G+ GYF SVYG + C C +I + VQ RSTFYC CQ Sbjct: 222 QVNGNPGYFTQNLSVYGCKNKKCY-RCKGIIIKFVQNQRSTFYCKKCQ 268 >gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] Length = 276 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 MPELPEVE + + L ++ N T+TD+ + +NL +P G KI +SRR Sbjct: 1 MPELPEVETVIKGLRPLIINKTITDLEVREENLI-GYPDLSTVELKQMLIGAKIDSISRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY+LI+L+ N +++HL M+G +++ + +H H+ SL + + + Sbjct: 60 GKYILIKLDINKILVIHLRMTGKLLVKEVEEFRD----KHTHIIFSLDDGQE-----IRF 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 N+ R+FG + L++ Q L TLGPEP + + + F + +K+ LLNQK Sbjct: 111 NNVRKFGRIYLIDPDRPEQAGGLATLGPEPLSDQLSLEDFKNLFTNRRGVIKSLLLNQKF 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E L+ + + P RK +L + K+ ++ +L I GG+S Sbjct: 171 IAGIGNIYADEILYLSGIKPDRKADTLSEEEK------EKIYFNMKDILEKGIIYGGTSF 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYV+ G G FQ V+ + GE C C I++ GR++++C+ CQ Sbjct: 225 SDYVNAFGEKGSFQAELKVHQREGEEC-HICSSKIKKKKIGGRASYFCSKCQ 275 >gi|113954166|ref|YP_729781.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] gi|113881517|gb|ABI46475.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9311] Length = 290 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 137/304 (45%), Gaps = 32/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + ++D+ + R P F + ++ + RR K Sbjct: 1 MPELPEVETVRRGLANRLDQFVISDLEVCRDRAIASPGGPECFESGLLNCRVGNWMRRGK 60 Query: 59 YLLIEL------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 YL EL E VHL M+G F +H V Sbjct: 61 YLYSELYRPGSAEANSAEESAGYWGVHLRMTGQFQWIEDDTP----PCKHTRVRF----- 111 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 N K + + D R F M V + L+ LGPEP F YL +F Sbjct: 112 WNAKGQELRFVDLRSFAEMWWVPPDTAVESIITGLKKLGPEPFSQDFKTQYLQERFKGST 171 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++K ALL+Q IVAG GNIY E+L+ A + P L + L KL + + ++ Sbjct: 172 RSIKAALLDQSIVAGTGNIYADESLFAAGICPQTPAGQLNRKQ------LEKLRECLIEI 225 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +I AGG++ D+ ++G G + +VY +TG+PC CG+ I RI AGRST +C Sbjct: 226 LELSIGAGGTTFSDFRDLEGVNGNYGGQAAVYRRTGQPC-PKCGKAIERIKLAGRSTHWC 284 Query: 285 TYCQ 288 + CQ Sbjct: 285 SSCQ 288 >gi|266618592|pdb|3GPU|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec4-Loop Deletion Complex Length = 256 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 36/290 (12%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAKY 59 PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+ Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ + ++I HL M G + + + H HV T+ + + Y D Sbjct: 61 LKFLLDRD-ALISHLRMEGRYAV----ASALEPLEPHTHVVFCFTDGSELR-----YRDV 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIYV E+L+RA + P R SL + +L +E+ + +A+ G Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKG------- 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Q+ VYG+ G PC CG I + V AGR T YC CQ+ Sbjct: 218 ----------QHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 256 >gi|239982551|ref|ZP_04705075.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291454393|ref|ZP_06593783.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] gi|291357342|gb|EFE84244.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces albus J1074] Length = 286 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +V + H + +R F+ G + RR Sbjct: 1 MPELPEVEVVRRGLERWITGRSVASADVLHPRAVRRHLAGGEDFARRLTGLRFAAPLRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ +++ HLGMSG +++ + +H V + ++ T+ + + Sbjct: 61 KYLWLPVDDAPFAVLAHLGMSGQLLVQPGEAP----DEKHLRVRLRFADDLGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T + + +P D F+ ++ + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTGPDGLPDVIAHIARDPLDPLFDEDAFHQALRRRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ I+ V+ A+D GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYDRPTATLTRPRS------AELLTHIRAVMTAALDVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG IRR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPCD-RCGTPIRRRPWMNRSSYFCPRCQR 280 >gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] Length = 281 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 98/299 (32%), Positives = 142/299 (47%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + VT + + + F+ G+ I V RRAK Sbjct: 1 MPELPEVETIARALAPGLTGRAVTGLVVPDPKVLAGPRTKAAFAKNLVGRPITTVDRRAK 60 Query: 59 YLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 LL+ L + + HL M+G F I P + + + L + Sbjct: 61 LLLVRLGPRPEVAGDAAAVLAFHLKMTGRFHIASADAPVPERA----RLLVDLNDGQ--- 113 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++++D RRFG L + +LGPEP D T ++++ +K Sbjct: 114 --ALVFSDLRRFGTARLFSPEGLAAWDFYASLGPEPWD--MTPEAFTTALSRRSTRIKAV 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY E+L A + P + + + KL+ IQ V+ AI Sbjct: 170 LLDQTVIAGIGNIYADESLHAAGIHPETRAGDISPSRA------EKLLAAIQAVIARAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGS++RDY DG G FQN F+VYGK GEPC +CG + + AGR++ +C CQK Sbjct: 224 AGGSTIRDYRTPDGVEGGFQNEFAVYGKAGEPC-PDCGTKLVAVKVAGRTSTFCPTCQK 281 >gi|269958776|ref|YP_003328564.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] gi|269848606|gb|ACZ49250.1| formamidopyrimidine-DNA glycosylase [Anaplasma centrale str. Israel] Length = 267 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 158/289 (54%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V D+ +HR++LR F +A +G++I V R A+YL Sbjct: 1 MPELPEAEVISRFFADKAVGRRVEDVTVHRRDLRARIADDFESAVKGREIRSVDRIARYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL +I HLGMSG I KP +H+HV + L + ++ +++NDPR Sbjct: 61 VFELSDGARVIFHLGMSGRMI-----HTKPHVLGKHDHVVMLLDD-----EFNIVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV+ +GP+P F+A YL + + +K+ L+N IVAGI Sbjct: 111 RFGSVLLVDFQAYANIA--SRIGPDPLSAEFSATYL---MRQSKACVKSTLMNNSIVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA +SP+R + ++++E + L AIDAGGS+++DY Sbjct: 166 GNIYASEILFRAGVSPMRAMDDVSYEE------CEQIVRETKATLRLAIDAGGSTIKDYT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G++G FQ F VY + G+PC CG+ I +GR+TF+C CQK Sbjct: 220 IPTGAVGGFQKHFMVYQRAGKPCN-ICGERILSERLSGRTTFFCALCQK 267 >gi|126695693|ref|YP_001090579.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9301] gi|166198727|sp|A3PB53|FPG_PROM0 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126542736|gb|ABO16978.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9301] Length = 292 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 145/309 (46%), Gaps = 37/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + +P F + I RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDS-TVAYPSNKEEFIKGLKNSLIYKWDRRG 59 Query: 58 KYLLIEL---------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 KYL+ +L + N ++VHL M+G F S +H + Sbjct: 60 KYLIAQLKEVQNENTEFPLENSQNNGFLVVHLRMTGYFKFIENST----HPCKHTRIRFF 115 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQF 160 NN + Y D R FG M + L L +LGPEP FNA YL Sbjct: 116 DKNNNELR-----YVDVRSFGQMWWINKDLSINKVIKGLGSLGPEPFSKDFNANYLKEAI 170 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + Sbjct: 171 SKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKKS 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I VL +I +GG++ D+ ++G G F +VY +TG C CG +I R GRS Sbjct: 225 IVIVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGREC-RKCGNLIERQKITGRS 283 Query: 281 TFYCTYCQK 289 T +C CQK Sbjct: 284 THWCPNCQK 292 >gi|118464268|ref|YP_882954.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254776228|ref|ZP_05217744.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|166215633|sp|A0QJ66|FPG_MYCA1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118165555|gb|ABK66452.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 283 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 149/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHSHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + +++VHLGMSG ++ P+ HV IS + T + + Sbjct: 61 KYLWLLLDGRDTALVVHLGMSGQMLLGAV--------PRAEHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DL+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R +L + L ++ V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIADALTRKQ------LTAVLDAAADVMRDALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|322419618|ref|YP_004198841.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] gi|320126005|gb|ADW13565.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M18] Length = 270 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I V RR KYL Sbjct: 1 MPELPEVEVTRLGITSHLTGARIAALSVHSPKLRAMVPAGLAGLLAGETIRCVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ S+++HLGM+G + + A H+H + L + + ND R Sbjct: 61 ILTCASG-SLLLHLGMTGHLRLVPATSA----PGPHDHFDLRLESG-----LTLRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + Q+ L+ +GPEP +FNA L + L+ L++ +VAGI Sbjct: 111 RFGSIH-FTAADPLQHRLLKKIGPEPLTAAFNAEGLYRLSRNRKVALQRFLMDSAVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R +L P SL + T +L+ I++ L D+I AG SS+ D+ Sbjct: 170 GNIYAAESLFRCRLFPETPAGSLTLADCT------RLVDAIKETLSDSIAAGRSSM-DFR 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + YF VYG+ GEPC CG IRR RSTF+C CQ+ Sbjct: 223 RQEERLAYFPQELYVYGREGEPC-RECGSPIRRGRLGNRSTFFCAACQR 270 >gi|282896919|ref|ZP_06304925.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] gi|281198328|gb|EFA73218.1| Formamidopyrimidine-DNA glycolase [Raphidiopsis brookii D9] Length = 277 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + +T D+ L F +G I R K Sbjct: 1 MPELPEVETVRRGLNQLTLHQPITGGDVLLASTVAYPFAGEEFIGDIKGNTIKSWIRCGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL EL + + VHL M+G + + + P H H + L K+ + + D Sbjct: 61 YLLAELSSSAWLGVHLRMTGQLLWLNQ------EEPLHKHTRVRLFFG---KEQELRFVD 111 Query: 119 PRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R FG M V + + + L L +P F YL + K +K ALL+Q I Sbjct: 112 QRTFGKMWHVPSGVVREEIITGLGKLAIDPFAVEFTPEYLATKLAKVRRPIKTALLDQSI 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EAL+++ + P ++ + L I +VL +I AGG++ Sbjct: 172 VAGLGNIYADEALFKSGILPTTICTNIDEKQIGS------LRMAIIEVLSASIAAGGTTF 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +++++ G G + VY + G+PC CG MI+R +GRS+ +C CQ Sbjct: 226 SNFLNVKGVNGNYGGEAWVYNRAGDPC-KVCGSMIQRTKLSGRSSHFCPQCQ 276 >gi|257058047|ref|YP_003135935.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] gi|256588213|gb|ACU99099.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8802] Length = 282 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 135/297 (45%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + D + R F ++ RG + RR K Sbjct: 1 MPELPEVETVRRGLNQFTSGKIIEDAEILLTRSLAYPTSVDEFLSSIRGVSFGEWQRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L E + VHL M+G + + S P H + L N + Sbjct: 61 YLLGTLVKGSGEAAGWLGVHLRMTGQLLWVNQS------EPLQTHTRLRLFCGENQE--- 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V Q L+ LG EP + F+ Y T + + N+K L Sbjct: 112 LRFVDIRTFGKVWWVPPKETPQRVITGLKKLGVEPFSDEFSVDYFTTKLKGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY E L+++ + P ++L + +L I +VL AI Sbjct: 172 LDQEIVAGLGNIYADEVLFKSGVHPTTLGKNLKPQQ------IEQLRIAIIEVLETAIVH 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|123967891|ref|YP_001008749.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. AS9601] gi|166198730|sp|A2BPD1|FPG_PROMS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123198001|gb|ABM69642.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. AS9601] Length = 292 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 104/308 (33%), Positives = 144/308 (46%), Gaps = 35/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F R I RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEICRYSTVAFPTNKEEFIKGLRNSLIYKWDRRGK 60 Query: 59 YLLIEL---------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 YL+ +L + N ++VHL M+G F S +H V Sbjct: 61 YLIAQLKEVQNEHTQLPLENSQNNGFLVVHLRMTGYFKFIENSS----NPCKHTRVRFFD 116 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFH 161 NN + Y D R FG M + L L +LGPEP FNA YL Sbjct: 117 KNNNELR-----YIDVRSFGQMWWINNDLSLNKIIKGLGSLGPEPFSKDFNANYLKKVIS 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + I Sbjct: 172 KRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKESI 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R GRST Sbjct: 226 VTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERQKITGRST 284 Query: 282 FYCTYCQK 289 +C CQK Sbjct: 285 HWCPKCQK 292 >gi|118470267|ref|YP_886759.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|166215635|sp|A0QV21|FPG_MYCS2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118171554|gb|ABK72450.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 285 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P +A +I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGKTITGVRVHHPRAVRRHEAGPADLTARLLDVRITGTGRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ + +++VHLGMSG ++ PI++ +H + L + T + + Sbjct: 61 KYLWLTLDDSAALVVHLGMSGQMLLG------PIRDTRHLRIAAVLDDGT-----ALSFV 109 Query: 118 DPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG L V P+ + +P D F+ + K+S +K LL+Q Sbjct: 110 DQRTFGGWQLTEMVTVDGTDVPEPVAHIARDPLDPLFDRDRVVTVLRGKHSEIKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR K++ R +L P+ L +L+ +V+ DA+ GG+ Sbjct: 170 TVVSGIGNIYADEALWRTKINGARIAAAL------PRRRLAELLDAAAEVMTDALGQGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG ++RR RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSFYCPRCQ 277 >gi|68536282|ref|YP_250987.1| formamidopyrimidine-DNA glycosylase [Corynebacterium jeikeium K411] gi|90101301|sp|Q4JUY8|FPG_CORJK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|68263881|emb|CAI37369.1| mutM [Corynebacterium jeikeium K411] Length = 288 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 31/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L + TD+ + H + +R P ++ R + V RR K+ Sbjct: 1 MPELPEVEVVRRGLEEHLVGRRFTDVQVCHPRAVRSGEPEVLVSSLRDATVTAVKRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L ++ + + VHLGMSG ++ + HV I + + + D Sbjct: 61 LWLDFGEDFLLQVHLGMSGQMLVAEPGQVQS------PHVRIR---AGLSDGRELCFVDQ 111 Query: 120 RRFGFMDL-------VETSLKYQYPP------LRTLGPEPADNSFNAIYLTHQFHKKNSN 166 R FG L P + + +P + F+A + K + Sbjct: 112 RTFGEWRLEKAVPDPWAAGAGVASPKNFLPQNVSHIAADPLEAVFDAQAAVARMKSKRAA 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LLNQ++V+GIGNIY EAL+ A + P R L + L++++Q +V+ Sbjct: 172 VKTVLLNQEVVSGIGNIYADEALFLAGVRPRRSAALLSRP------TLHRVLQSAAEVME 225 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A++ GG+S YV+++G+ GYF + +VYG+ GEPC CG I+R+V GRST YC Sbjct: 226 CALEQGGTSFDSLYVNVNGASGYFSRSLNVYGRGGEPC-KRCGAPIKRVVVGGRSTHYCA 284 Query: 286 YCQK 289 CQ+ Sbjct: 285 TCQR 288 >gi|300858756|ref|YP_003783739.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686210|gb|ADK29132.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302206462|gb|ADL10804.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] gi|302331017|gb|ADL21211.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308276704|gb|ADO26603.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 285 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 153/296 (51%), Gaps = 20/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L +T + + H + R+ P A RG+ + V RR Sbjct: 1 MPELPEVEVVRRGLERHAVGRALTSVAVSHSRAARYVVGGPQELEARLRGRVLSSVHRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L L+ + +++VHLGMSG +I+ + H H I + ++ +++ + + Sbjct: 61 KFLWFVLDDSCALMVHLGMSGQMLIKQADAS------LHPHTRIRCSLSSGSEQSELWFV 114 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG+ +LV + + P+ + + + + + + K+ +K LLNQ Sbjct: 115 DQRTFGYWRIAELVYSHNRLVPKPMAHIAADLLEPAQDLMATARLIKTKHLEIKRLLLNQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +IVAGIGNIY E LW A++ P +K L ++ L+ E Q+V+ +A+ GG+ Sbjct: 175 EIVAGIGNIYADEMLWSAQIHPRQKAHRLSLR------AIHSLLNEGQRVMHNALLQGGT 228 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF + YG+ G PC + CG + R + RS+ +C CQ+ Sbjct: 229 SFDSLYVNVNGESGYFDVSLQAYGQEGMPC-TRCGTALVREKFSNRSSHFCPRCQR 283 >gi|239944598|ref|ZP_04696535.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239991060|ref|ZP_04711724.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291448062|ref|ZP_06587452.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] gi|291351009|gb|EFE77913.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT++ + H +++R F+A RG ++ RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVTEVEVLHPRSVRRHLAGGVDFAARLRGARLGAAMRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E + S++ HLGMSG +++ + +H + + + T+ + + Sbjct: 61 KYLWVPIEEASASLLGHLGMSGQLLVQPADAP----DEKHLRIRMRFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRAKL R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRAKLHYDRPTATLTRPKS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC C +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPCN-RCSTPMRRRAWMNRSSYYCPRCQR 280 >gi|307329835|ref|ZP_07608990.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] gi|306884564|gb|EFN15595.1| formamidopyrimidine-DNA glycosylase [Streptomyces violaceusniger Tu 4113] Length = 310 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 24/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ + P F+A RG++ V RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAEVQVLHPRAVRRHLGGPEDFAARLRGRRTGIVRRRG 60 Query: 58 KYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + + + +++ HLGMSG +++ + +H + + + T+ + Sbjct: 61 KYLWLPFDDDAAAEAVLAHLGMSGQLLVQPAEAP----DEKHLRIRVRFADAAGTE---L 113 Query: 115 IYNDPRRFGFMDLVET---SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG + L +T L+ + + +P D +F+ ++ + +K AL Sbjct: 114 RFVDQRTFGGLSLHDTVPGDLEGLPDAIAHIARDPLDPAFDEAAFHTALRRRRTTIKRAL 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ Sbjct: 174 LDQSLISGVGNIYADEALWRARLHYDRPTATLARPRA------AELLGHVREVMTAALAV 227 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S YV+++G GYF+ + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 GGTSFDSLYVNVNGESGYFERSLDAYGRENEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 285 >gi|296117606|ref|ZP_06836190.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295969337|gb|EFG82578.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 270 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 148/295 (50%), Gaps = 31/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + + + + A + + V+RR KYL Sbjct: 1 MPELPEVEVVRRGLEPHIVDHAFKSVEILHPRANRGQDEPLGALLHNRVVSAVARRGKYL 60 Query: 61 LIELEG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 EL+G + + +HLGMSG I HT +H + LT+ + + Sbjct: 61 WCELDGHTEREDDVLFMHLGMSGQLRIGHTDS-------KHVRIRAHLTDGVD-----LS 108 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG+ + + + +G +P F+ + + K +++K ALL+Q Sbjct: 109 FIDQRTFGYWLVAPKAK------IDHIGHDPLSPDFDIVAAARKLRTKKTHVKTALLDQT 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I +GIGNIY EALWRA +SP+RK L+Q + + ++V+++A+ GG+S Sbjct: 163 IASGIGNIYADEALWRAHVSPLRKANRLLQREAV------AIYEAAKEVMLEALAQGGTS 216 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + VYG+T EPC + CG I R+V RS+ +C CQ+ Sbjct: 217 FDALYVNVNGESGYFARSLHVYGRTDEPCDT-CGGPISRVVLNARSSHFCPLCQR 270 >gi|326776325|ref|ZP_08235590.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] gi|326656658|gb|EGE41504.1| Formamidopyrimidine-DNA glycosylase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ + H + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ + S++ HLGMSG ++ + +H + + + T+ + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVRPADAP----DEKHLRIRMRFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPDTIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|238063284|ref|ZP_04607993.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885095|gb|EEP73923.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 285 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + + P HF+ G+ + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTGRRIAGVEVRHPRAIRRHLAGPAHFADVLAGRTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +I+ HLGMSG +++ + A + H V ++ + + Sbjct: 61 KYLWLPLNSGDAIVGHLGMSGQLLLQPATAADEL----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG V P + + +P D F+ ++ + +K ALL+Q +V Sbjct: 113 DQRTFG-GLAVSAGGAELPPEIAHIARDPMDPGFSDGAFVAALLRRRTEVKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRAKL + T L +LI ++ VL +A+ GG+S Sbjct: 172 SGIGNIYADEALWRAKLHGAQPTDQLTAPAAQ------RLIGHVRDVLGEAVKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A + YG+ GEPC CG +RR RS++ C CQ Sbjct: 226 ALYVNVNGESGYFDRALNAYGREGEPC-RRCGTPLRREAFMNRSSYSCPRCQ 276 >gi|226305919|ref|YP_002765879.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] gi|259647148|sp|C0ZXQ5|FPG_RHOE4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226185036|dbj|BAH33140.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus erythropolis PR4] Length = 289 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + H + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + ++VHLGMSG +++ + + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQPPT----VDWEKHLRIRLALDSGADLR-----F 111 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LVE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R SL + L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIAESLTRP------KLRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|311742942|ref|ZP_07716750.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313622|gb|EFQ83531.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 284 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L+ + TV+D+ + ++LR P F+ RG+ ++D RR Sbjct: 1 MPELPEVEVVRLGLVDHVVGRTVSDVRVLDARSLRRHLPGPVDFADRLRGRTVVDACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +I + +P+H V + L + T R+ + Sbjct: 61 KYLWLPLDDGSALTAHLGMSGQMLI----GTEQTPDPRHLRVGLDLDDGT-----RLHFV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + + + + + +P D +F+A + + ++ + +K ALL+Q +V Sbjct: 112 DQRIFGGLAVSDQVSDGVPAAMAHIARDPLDPAFDAEEFSARLRRRQTGVKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWR L R TR L + + L++ + V+ A++ GG+S Sbjct: 172 SGIGNIYADEALWRVPLHYARNTRHLRRAE------IDALVEHVTDVMRAALEQGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GEPC C +RR RS+F+C CQ Sbjct: 226 ALYVNVNGQSGYFDRSLHAYGREGEPCD-RCTTPMRRSPFMNRSSFWCPACQ 276 >gi|254383290|ref|ZP_04998643.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] gi|194342188|gb|EDX23154.1| formamidopyrimidine-DNA glycosylase lyase mutM) [Streptomyces sp. Mg1] Length = 286 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ D+ + P F+A RG+ + RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTIEDVEVLHPRAVRRHPAGGVDFAARLRGETVGVPQRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L G +LS++ HLGMSG +++ + +H + + + T+ + + Sbjct: 61 KYLWLPLAGRDLSVLGHLGMSGQLLVQPADAP----DEKHLRIRVRFDDAAGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDEAAYHLALRAKRSTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRP------LSAELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|302537166|ref|ZP_07289508.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446061|gb|EFL17877.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 289 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 22/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + + H + +R F+A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRTVAAVEVLHPRAVRRHLAGGPDFAARLAGQTIGVPRRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LEG +LS++ HLGMSG +++ + +H + + ++T T+ + + Sbjct: 61 KYLWLPLEGRDLSVLGHLGMSGQLLVQPADAP----DEKHLRIRLRFADDTGTE---LRF 113 Query: 117 NDPRRFGFMDLVET---SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + L ET S + + + +P D F+ K + +K ALL+ Sbjct: 114 VDQRTFGGLSLHETVPGSAEGLPDVIAHIARDPLDPLFDEGAYHLALRAKRTTVKRALLD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L R T +L + +L+ +++V+ A+ GG Sbjct: 174 QSLISGVGNIYADEALWRARLHYERPTATLTRPRS------AELLTHVREVMNAALAVGG 227 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +S YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 TSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRAWMNRSSYFCPRCQR 283 >gi|16330976|ref|NP_441704.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] gi|2494596|sp|P74290|FPG_SYNY3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1653470|dbj|BAA18384.1| formamidopyrimidine-DNA glycosylase [Synechocystis sp. PCC 6803] Length = 287 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 135/298 (45%), Gaps = 26/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + T+ ++ L R F G +++ RR K Sbjct: 1 MPELPEVETVCRGLNRLTLEQTIGGGEVLLDRSLAYPVSVEDFQKQITGCRLVGWQRRGK 60 Query: 59 YLLIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YLL EL N + HL M+G + + + P+H V + + Sbjct: 61 YLLGELRSNQAPGPAGWLGCHLRMTGQLLW----TERDQQRPRHTRVVLHFEGG-----W 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQY--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG + L+ + L LGPEP F A YL + LKNA Sbjct: 112 ELRFVDTRTFGKVWLLPGDRPWAEVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRPLKNA 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q++VAG+GNIY E L+ P + + + + Q+IQ L AI+ Sbjct: 172 LLDQRLVAGLGNIYADEVLFFCGFHPTMASNQVSLQD------CELIHQQIQATLTAAIE 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG+S DY + G G + VYG+ GEPC +CG +I +I GRS +C CQ Sbjct: 226 AGGTSFSDYRQVTGINGNYGGMAQVYGREGEPC-RHCGTVIAKIKLGGRSAHFCPQCQ 282 >gi|149925769|ref|ZP_01914033.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] gi|149825886|gb|EDM85094.1| formamidopyrimidine-DNA glycosylase [Limnobacter sp. MED105] Length = 272 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 153/290 (52%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI +R + + + + + LR+ + + + + V RR+KY+ Sbjct: 1 MPELPEVEITKRGVDLHFTGQRLLACTVRQPRLRWPVSTQVQSCVK-QILQAVERRSKYM 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ G ++VHLGMSGS I S +H+H+ + + + YNDPR Sbjct: 60 LMDF-GGQVLVVHLGMSGSMKIVSASTP----WDKHDHIEWNFGDKV------LRYNDPR 108 Query: 121 RFGFMDLVETSLKYQYPPLR--TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RFG ++ VE + ++ +R LGPEP ++F K ++K LL+ V Sbjct: 109 RFGSVEYVEKAPGWEDSFVRFAKLGPEPFSDAFTPESFFKATRGKKVSIKALLLSGFAVV 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY CEAL+R+ + P + L + N L + VL +AI+ GGS+LR+ Sbjct: 169 GVGNIYACEALFRSAIRPGKAAGRLSRANAQ------ALHAAVVAVLTEAIERGGSTLRN 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + IDG +G+FQ VYG+ G+PC CG +++R V RSTFYC CQ Sbjct: 223 FQAIDGELGHFQLHCDVYGREGQPC-KRCGALVKRRVMNQRSTFYCAQCQ 271 >gi|93117329|gb|ABE99582.1| fpg [Neisseria meningitidis H44/76] Length = 250 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 140/264 (53%), Gaps = 14/264 (5%) Query: 14 LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVH 73 + ++ TV + L + LR+ G++++ RRAKYLLI + +++H Sbjct: 1 IAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQTG-VLLIH 59 Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 LGMSGS I S + + +H+HV I ++ T + Y DPR+FG + E ++ Sbjct: 60 LGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GIE 113 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 +P L LGPEP +F A YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAG 173 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ + Sbjct: 174 ISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEY 227 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQA 277 +VYG+ +PC CG ++ + Sbjct: 228 TVYGRHNQPC-PRCGGLVVKETLG 250 >gi|229491415|ref|ZP_04385239.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229321700|gb|EEN87497.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 289 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + H + +R G+ I RR Sbjct: 1 MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHILGSEDLIGQLTGQTIASAERRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + ++VHLGMSG +++ + + +H + ++L + + + + Sbjct: 61 KYLWLVLEPAGVGLVVHLGMSGQMLVQPPT----VDWEKHLRIRLALDSGADLR-----F 111 Query: 117 NDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG LVE + + +P D +F+ + K++ +K A+L+ Sbjct: 112 VDQRTFGGWSISPLVEVDGTMLPESVAHIARDPMDAAFDLESVVKVLRGKHTEIKRAILD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY E+LWRAK+ R +L + L +L+ V+ +A+D GG Sbjct: 172 QTVVSGIGNIYADESLWRAKIHGNRIAETLTRP------KLRELLTAAHSVMGEALDQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG I+R RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQENLPC-PRCGAPIKREKFMNRSSFSCPRCQ 280 >gi|51244765|ref|YP_064649.1| formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] gi|81692916|sp|Q6APT2|FPG_DESPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50875802|emb|CAG35642.1| probable formamidopyrimidine-DNA glycosylase [Desulfotalea psychrophila LSv54] Length = 277 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 149/292 (51%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAA-TRGKKIIDVSRRAKY 59 MPELPEVEII R + ++ T+ + K LR P GK+I + RR KY Sbjct: 1 MPELPEVEIILRGISPLICGRTIVAVGGSGKQLRLPLPLPELNRDASGKEITRLERRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + I L +++HLGM+G + A+ +H+H L NN + YND Sbjct: 61 ISIFLNDGGILVLHLGMTGQLGVFPKEQARA----KHDHFWCRLDNNQEFR-----YNDT 111 Query: 120 RRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + + Q + LGPEP +F A YL K+ +KN +++ IV Sbjct: 112 RRFGSIRFLPAGKSRMLQESLYQKLGPEPLGETFTADYLRRAAEGKSLAIKNFIMDSHIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E+L++A + P R +S+ Q KL + IQ++L+ AID GGS++ Sbjct: 172 VGIGNIYANESLFKAAIHPARSVQSIEQEE------WEKLARCIQQILLHAIDCGGSTIS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V+ G GYFQ F VYGK PC +C I GR++F+C CQ+ Sbjct: 226 DFVNAKGGQGYFQMNFKVYGKKSLPC-PHCQGPISSEKIGGRASFFCPSCQR 276 >gi|146328737|ref|YP_001210018.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] gi|166215622|sp|A5EXK6|FPG_DICNV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|146232207|gb|ABQ13185.1| formamidopyrimidine-DNA glycosylase [Dichelobacter nodosus VCS1703A] Length = 272 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 153/290 (52%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L ++ T+T + + LR + +I +++RRAKYL Sbjct: 1 MPELPEVETCKKGLRPLLCQKTITAVDVRAARLREPLDAIALSQLIHCQITEITRRAKYL 60 Query: 61 LIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +I + +++++VHLGMSGS + + +H+H+ I+L + Y + Y+DP Sbjct: 61 IININREDIAVLVHLGMSGSLRV----LPQTEPIKKHDHIIITLNDG-----YSLRYHDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + + L+ LG EP D+S L K+ + + ++NQ I+ G Sbjct: 112 RRFGLFTVFHAQKP--HRLLQHLGIEPLDDSCTGDVLHQHCQKRKIKINSLIMNQNIIVG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ + + P R ++L L+ +I+ +L AI GG++LRD+ Sbjct: 170 IGNIYATEALFLSGIRPDRPAQTLSAAECAS------LMAQIKTLLTAAIARGGTTLRDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG GYFQ VYGK+G+ C CG ++ + + R T YC +CQ+ Sbjct: 224 SAPDGHAGYFQQQLHVYGKSGQHC-PKCGNILEDLKISNRGTVYCPHCQR 272 >gi|182435700|ref|YP_001823419.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238689009|sp|B1VYY1|FPG_STRGG RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|178464216|dbj|BAG18736.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV+++ + H + +R F+A G + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVSEVEVLHPRAVRRHLAGGVDFAARLAGARFGAAMRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + ++ + S++ HLGMSG ++ + +H + + + T+ + + Sbjct: 61 KYLWVPIDEASASLLGHLGMSGQLLVRPADAP----DEKHLRIRMRFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHANTPDGLPETIAHIARDPLDPLFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + +L+ + V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYDRPTATLTRPRS------AELLGHARDVMNAALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGEPC-HRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|239928704|ref|ZP_04685657.1| formamidopyrimidine-DNA glycosylase [Streptomyces ghanaensis ATCC 14672] gi|291437028|ref|ZP_06576418.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] gi|291339923|gb|EFE66879.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces ghanaensis ATCC 14672] Length = 286 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + F+ G +I RR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGADDFAHRLEGHRIGTADRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + S++ HLGMSG +++ + +H + + ++ +T+ + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHDAP----DEKHLRIRVRFADDLHTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ T + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYESPTAGFTRPRTL------LLLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPVRRRPWMNRSSYFCPKCQR 280 >gi|284992410|ref|YP_003410964.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] gi|284065655|gb|ADB76593.1| formamidopyrimidine-DNA glycosylase [Geodermatophilus obscurus DSM 43160] Length = 292 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +V + +H + HF AA G+ + RR Sbjct: 1 MPELPEVEVVRRGLERWVAGRSVASVEVHHPRAVRRHLEGAEHFVAALTGRTLTAAHRRG 60 Query: 58 KYLLIELE------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 KYL + L +++ HLGMSG ++E + P H+ T ++ Sbjct: 61 KYLWLPLAEGDGTPAGQALVAHLGMSGQLLVEKPT------QPDETHLRARFTFTDGGRE 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 R + D R FG + + +T PP + + +P D +F+ + + ++ + +K A Sbjct: 115 LR--FVDQRTFGGLAVEDTGEGDTVPPRVAHIAIDPLDPAFDEAEFSTRLRRRRTEVKRA 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++ G+GNIY E+LWRA+L R T L + + L++ ++ VL +++ Sbjct: 173 LLDQTLIGGVGNIYADESLWRARLHGNRPTDRLTRAQ------VGALLEGVRDVLHESLA 226 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV ++G GYF +VYG+ PC CG I R RS++ C CQ Sbjct: 227 QGGTSFDSLYVDVNGQSGYFSRHLAVYGQADRPC-PRCGTPIVRESFMNRSSYSCPQCQ 284 >gi|116625750|ref|YP_827906.1| formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|122252077|sp|Q01RU9|FPG_SOLUE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116228912|gb|ABJ87621.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 264 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 28/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R+L + + + LR P SA G+KI+ + R K+ Sbjct: 1 MPELPEVETVVRSLAP-LVGRRIATAEFRNLRILRGGDPDLMSARLAGRKILSIKRYGKF 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +EG +++HLGM+G ++ S +H H ++ T ++++D Sbjct: 60 IVAVIEGGGHLMIHLGMTGKLLLGGPSG-------KHTHAVLTFDRGT------LLFDDS 106 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG ++ + + LGPEP + SF ++ + +K+ LLNQ + G Sbjct: 107 RQFGCIEY----SEEFPKRVARLGPEPMEISF--EDFAADLKRRKTRIKSLLLNQTFIRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+RA + P T + KL I +VL +AI+AGGSS+ DY Sbjct: 161 VGNIYADEALFRAGIHPQALTSRIRIERA------RKLYDAIGEVLTEAIEAGGSSISDY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V +G G+FQ + VY +TGEPCL NC IRR++ RS+ +C +CQK Sbjct: 215 VDAEGRSGFFQFSHRVYQRTGEPCL-NCKTPIRRVIVTQRSSHFCPHCQK 263 >gi|313201757|ref|YP_004040415.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] gi|312441073|gb|ADQ85179.1| formamidopyrimidine-DNA glycosylase [Methylovorus sp. MP688] Length = 262 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 141/277 (50%), Gaps = 19/277 (6%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 + L + V + + LR+ P + + ++RRAKY+L + + ++ Sbjct: 2 QGLAP-LVGQPVAKVIIRHPTLRWPIPADLVHTLPQQTLKSLTRRAKYILAQFDTGY-LL 59 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSG + A+ +H+H + + + DPRRFG + L + Sbjct: 60 LHLGMSGRICL----LAQDEPAAKHDHFDLHFADGQVLR-----LRDPRRFGAV-LWAGA 109 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 Q+ L LGPEP +++F+ +L QF +++ +KNA+++ +V G+GNIY E+L+R Sbjct: 110 DPAQHALLNVLGPEPLESAFDGDWLYRQFRTRSAPVKNAIMDSHLVVGVGNIYASESLFR 169 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A++ P L + +L EI+ L DA+ AGGSSLRD+ DG+ GYFQ Sbjct: 170 ARIHPQTPANQLSR------QACDRLAAEIKATLTDALAAGGSSLRDFFGADGNPGYFQQ 223 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + Y +TGE C C I+ + RSTF+C CQ Sbjct: 224 EYFTYARTGEAC-KICSTPIQNVRLGQRSTFFCPRCQ 259 >gi|224541517|ref|ZP_03682056.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] gi|224525554|gb|EEF94659.1| hypothetical protein CATMIT_00687 [Catenibacterium mitsuokai DSM 15897] Length = 270 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 145/289 (50%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + T+ I + + F + + I D+ R KYL Sbjct: 1 MPELPEVETVRRTLKNFVLHKTIDSIEVRYTRIIDGDVEAFVSTLIHQSICDIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ + + I HL M G + I+ +H+H+ +T+ T+ + YND R Sbjct: 61 IFILDHD-AFISHLRMEGKYNIKQKDEPYD----KHDHIIFHMTDGTDLR-----YNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV+ +YPPL LG EP D SF+ Y+ + H+ + +K LL+Q I GI Sbjct: 111 KFGRMQLVDKEHYREYPPLNRLGQEPMDASFD--YIYPRIHQSHLPIKQLLLDQSIFTGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E +R + P + L K + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFRMGMDPRTRGDRLS------KKRILELIEVSSTILKEAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ SV+ + S C I++I AGR T+YC CQK Sbjct: 222 DANGIHGLFQVTLSVHA---QKTCSKCKGPIKKITIAGRGTYYCPNCQK 267 >gi|323342140|ref|ZP_08082373.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464565|gb|EFY09758.1| DNA-formamidopyrimidine glycosylase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 273 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L +K + I L D + G RR KYL Sbjct: 1 MPELPEVETIIRTLEKSLKGKQIDSINFIYPKLLEDQSEYSLENLVGSNFKAFHRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E+ L I+HL M G F + A +H H I+ T + Y D R Sbjct: 61 WFEMSNGLHWILHLRMEGKFHLYDYDKA----PSKHTHCVINYDGGT------IHYLDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +F M +V+ LKY + LG EP D++ N Y+ + H +K+ LL+Q I+AGI Sbjct: 111 KFSRMAVVKDPLKYLET--KNLGYEPFDSNLNGEYVYQKIHHSKRVMKSILLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++ P+ + L++ + +L +AI AGG+++R Y Sbjct: 169 GNIYADEILFETQIHPLTTGSKITMKQCDS------LVETTKIILRNAIKAGGTTVRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQ + YG+ G+PC S C +++RIV +GRST +C CQK Sbjct: 223 SSLNVSGRFQINLNAYGRAGDPC-SRCNSIMKRIVVSGRSTVFCEKCQK 270 >gi|311696384|gb|ADP99257.1| formamidopyrimidine-DNA glycosylase [marine bacterium HP15] Length = 245 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 141/263 (53%), Gaps = 19/263 (7%) Query: 27 CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 + +LR+ P G+ I V RRAKYL + ++ ++IVHLGMSGS I + Sbjct: 2 TVRNGSLRWPVPADLGEKLEGQVIKSVDRRAKYLFLNMDRG-TVIVHLGMSGSLRIITDN 60 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 H+H+ ++L + + +NDPRRFG +++ + +P + LGPEP Sbjct: 61 TPPLT----HDHIDVALQSGVILR-----FNDPRRFGCWLWADSAEE--HPLITHLGPEP 109 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 FN +L KN+ +K+ +++ ++V G GNIY EAL+++ + P RK + Sbjct: 110 LAPEFNGAHLFRLSRGKNTPVKSFIMDNQVVVGAGNIYANEALFKSGIHPRRKAGRIS-- 167 Query: 207 NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 D ++L + I++ L AI GG++LRD+V+ DG GYF + VYG+ G+PC Sbjct: 168 ----LDRYHRLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGRGGQPCKE- 222 Query: 267 CGQMIRRIVQAGRSTFYCTYCQK 289 CG ++ I RST YC CQ+ Sbjct: 223 CGAPLKEIRMNNRSTVYCPRCQR 245 >gi|148241549|ref|YP_001226706.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] gi|147849859|emb|CAK27353.1| Formamidopyrimidine-DNA glycosylase [Synechococcus sp. RCC307] Length = 282 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 25/298 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + + + + R P F+AA RG ++ RR Sbjct: 1 MPELPEVETVRRGLELQVGRFPIGETIVCRSRAVAAPKGDPDGFTAALRGCELAGWRRRG 60 Query: 58 KYLLIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL+ +LE + + + VHL M+G F P H V ++K+ Sbjct: 61 KYLVAKLERDGAPAGELGVHLRMTGQFQWLQREERPPCP---HTRVRFL------SEKHE 111 Query: 114 VIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V T + L LGPEP ++FNA YL + + +KNAL Sbjct: 112 LRFVDVRSFGELWFVPLGTPTEQVITGLTRLGPEPFSDAFNANYLRQRLKGSSRPIKNAL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY E+L+ A + P + S+ L KL + KVL +I A Sbjct: 172 LDQALVAGVGNIYADESLFMAGIRPHTPSGSVSAAR------LEKLRAALVKVLELSIGA 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ + G+ G + VY + GEPC CG ++RR GRS+ +C CQ+ Sbjct: 226 GGTTFSDFRDLTGTNGNYGGQARVYRRGGEPC-RQCGTILRRDTLGGRSSHWCPSCQR 282 >gi|78778719|ref|YP_396831.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] gi|123554638|sp|Q31CK0|FPG_PROM9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|78712218|gb|ABB49395.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9312] Length = 293 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 97/309 (31%), Positives = 146/309 (47%), Gaps = 36/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N + + + + F F + + RR K Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRNSTVAFPTEKEEFIKGLQNSLLYKWDRRGK 60 Query: 59 YLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 YL+ EL + N ++VHL M+G F S + +H + + Sbjct: 61 YLIAELKKIENENIKFPLKKLRQNNGFLVVHLRMTGYFKFIDNST----QPCKHTRIRVF 116 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQF 160 + K + Y D R FG M ++ L L +LGPEP +F+ YL Sbjct: 117 -----DKKNNELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKNFDEKYLKKVI 171 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R +++ +N L L + Sbjct: 172 SKRKKSIKAILLDQTIVAGIGNIYADESLYSAGISPFRAAKTIKKNE------LINLKES 225 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I + AGRS Sbjct: 226 IVNVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIEKQKIAGRS 284 Query: 281 TFYCTYCQK 289 T +C CQK Sbjct: 285 THWCPNCQK 293 >gi|302554408|ref|ZP_07306750.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472026|gb|EFL35119.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 286 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 149/294 (50%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + F+ +G +I SRR Sbjct: 1 MPELPEVEVVRRGLQRWVAHRTVAETEVLHPRAVRRHLAGADDFAHRLKGHRIGTPSRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + SI+ HLGMSG +++ + + +H + + T+ +T+ + + Sbjct: 61 KYLWLPLEDTDQSILAHLGMSGQLLVQPHTAP----DEKHLRIRVRFTDALDTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ +K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDEFFDDEAFHRALRRKRSTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRPRTLS------LLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRPWMNRSSYYCPKCQR 280 >gi|113474804|ref|YP_720865.1| formamidopyrimidine-DNA glycosylase [Trichodesmium erythraeum IMS101] gi|123352603|sp|Q117D2|FPG_TRIEI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110165852|gb|ABG50392.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Trichodesmium erythraeum IMS101] Length = 300 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 33/311 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVEI+++ L + N + ++ L R F GK I R+ K Sbjct: 1 MPELPEVEIVKQGLNQLTLNKRILGGEVLLERTLAYPISVADFLRGLEGKAIAQWHRQGK 60 Query: 59 YLLIEL--------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YLL +L + + VHL M+G + + + +H V + Sbjct: 61 YLLAQLYKWGKKNSKLQEYENEDGWLGVHLRMTGQLLWVNPEESLH----KHTRVRLFFG 116 Query: 105 N----NTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTH 158 + + ++ Y + + D R FG M V + L+ LG EP F+ YL Sbjct: 117 HNSSGDKDSSNYELRFVDQRTFGKMWGVPPGKEISKVITGLQQLGLEPFSPEFSPKYLNK 176 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + +K++ +K ALL+Q +AG+GNIY EAL+ + + P + L + + +L Sbjct: 177 KLYKRHRPIKTALLDQTTIAGLGNIYADEALFLSGIRPTTICKDLTEKQ------IEQLH 230 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 I KVL AI+AGG++ +++++ G G + VY + G+PC C + +I AG Sbjct: 231 LAILKVLQTAINAGGTTFSNFLNVKGVNGNYGGVAWVYSRAGQPC-RICNTPLEKIKLAG 289 Query: 279 RSTFYCTYCQK 289 RST +C CQK Sbjct: 290 RSTHFCPQCQK 300 >gi|282861355|ref|ZP_06270420.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] gi|282564013|gb|EFB69550.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. ACTE] Length = 285 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 153/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ + H + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVEDVDVLHPRAVRRHIAGGPDFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL I L+ + S++ HLGMSG +++ + + +H + + ++ T+ + + Sbjct: 61 KYLWIPLDEVSASLLGHLGMSGQLLVQPSEAP----DEKHLRIRVRFADDLGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHTALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + +L+ ++ V+ +A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTATLTRPRT------AELLGHVRDVMREALAQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGQSGYFDRSLDAYGREDEPC-HRCGTPMRRRPWMNRSSYYCPRCQR 280 >gi|290957119|ref|YP_003488301.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260646645|emb|CBG69742.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 286 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 155/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D+ + H + +R P F+ +G +I + RR Sbjct: 1 MPELPEVEVVRRGLARWVAHRTVADVEVLHPRAIRRHLAGPEDFAHRLKGHRIGEPGRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + +E ++++ HLGMSG +++ A + +H + + ++ T+ + + Sbjct: 61 KYLWLPVEDTGIAVLAHLGMSGQLLVQPHEAA----DEKHLRIRVRFADDLLTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+A +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDAEAFHQALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTAGFTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGQSGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPTCQR 280 >gi|218245023|ref|YP_002370394.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] gi|226706478|sp|B7K1T1|FPG_CYAP8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|218165501|gb|ACK64238.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 8801] Length = 282 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 95/297 (31%), Positives = 139/297 (46%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + R L + + D + L R F + RG + RR K Sbjct: 1 MPELPEVETVCRGLNELTSGKVIKDAEVLLPRSLASPSSVDEFLSNIRGVIFGEWQRRGK 60 Query: 59 YLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 YLL L E + VHL M+G + + S I H + L N Sbjct: 61 YLLGTLVKESGEAAGWLGVHLRMTGQLLWVNQSEPLQI------HTRLRLFCGEN---KE 111 Query: 114 VIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D R FG + V T+ + L+ LG EP + F+ Y T + + + N+K L Sbjct: 112 LRFVDIRTFGKVWCVPPKTTPETIITGLKKLGVEPFSDDFSDDYFTTKLNGRQRNIKTLL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q+IVAG+GNIY EAL+++ + P ++L + +L I +VL AI+ Sbjct: 172 LDQEIVAGLGNIYADEALFKSGVHPTTLGKNLKPQQ------IEQLRIAIIEVLETAIEK 225 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++ D+ + G G + VYG+TGEPC CG I R+ GRS +C CQ Sbjct: 226 GGTTFSDFKGVTGINGNYGGTAWVYGRTGEPC-RVCGTSIERLKLGGRSAHFCPRCQ 281 >gi|108798918|ref|YP_639115.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119868033|ref|YP_937985.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. KMS] gi|123369434|sp|Q1BAM5|FPG_MYCSS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215637|sp|A1UED7|FPG_MYCSK RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|108769337|gb|ABG08059.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Mycobacterium sp. MCS] gi|119694122|gb|ABL91195.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. KMS] Length = 296 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 99/306 (32%), Positives = 147/306 (48%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIELEGNL-----------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L+ +++VHLGMSG ++ P+ +H+ I+ + Sbjct: 61 KYLWLTLDDGDEPLARRAESSVALVVHLGMSGQMLL--------GPIPKEDHLRIAALFD 112 Query: 107 TNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + K Sbjct: 113 DGT---ALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY EALWRAK++ R SL K L +++ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLT------KPKLAEILDHAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMRDALGQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|126434518|ref|YP_001070209.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. JLS] gi|166215636|sp|A3PXU1|FPG_MYCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|126234318|gb|ABN97718.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium sp. JLS] Length = 296 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + +T + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLDAHVTGKAITAVRVHHPRAVRRHEAGPADLTARLLGMRITGTGRRG 60 Query: 58 KYLLIELEGNL-----------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L+G +++VHLGMSG ++ P+ +H+ I+ + Sbjct: 61 KYLWLTLDGGDEPLARRAESSVALVVHLGMSGQMLL--------GPIPKEDHLRIAALLD 112 Query: 107 TNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + K Sbjct: 113 DGT---ALSFVDQRTFGGWLLADLVTVDGTDVPVPVAHVARDPLDPRFDRDAVVKVLRGK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY EALWRAK++ R SL K L +++ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADEALWRAKVNGARLAESLT------KPKLAEILDHAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMRDALGQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRREKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|254526097|ref|ZP_05138149.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] gi|221537521|gb|EEE39974.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9202] Length = 293 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 151/310 (48%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP F + + +RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDS-TVAFPSKKEDFIGGLQNSLLYKWNRRG 59 Query: 58 KYLLIELEG----------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 KYL+ EL+ N +IVHL M+G F S + +H + + Sbjct: 60 KYLIAELKKLGNENGRFPLEKFSKKNGFLIVHLRMTGYFKFIDCSA----QPCKHTRIRV 115 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQ 159 + K + Y D R FG M ++ L L +LGPEP F+ IYL Sbjct: 116 F-----DNKNNELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKV 170 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + Sbjct: 171 ISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKE 224 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I VL +I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GR Sbjct: 225 SIVTVLKKSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKAC-RKCGNLIERKKISGR 283 Query: 280 STFYCTYCQK 289 ST +C CQK Sbjct: 284 STHWCPKCQK 293 >gi|37912918|gb|AAR05254.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine proteobacterium ANT32C12] Length = 269 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + T+ +H +NLR+ +F + T+ + I +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINKF-SQSTLKSTKIHNRNLRWKVVENFESLTKNQSINKISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ N++II+HLGMSGS I + + +H+H ++YNDPR Sbjct: 60 IFHLD-NINIILHLGMSGSLRISKNNDNFFL---KHDHAEFIFDEEK------IVYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + ++ ++ LGPEP FN L K N+K+ L+NQK V GI Sbjct: 110 RFGSIHLADN--LDEHRLIKNLGPEPLSKDFNPNDLHKITAKSKINIKSLLMNQKNVVGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A+++P R L + K+ +K+L AI GG++L+D+ Sbjct: 168 GNIYASESLYLAQINPNRVASDLTIED------CKKITLSAKKILNAAIKVGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF+ + YG+ G C C +I ++V R+TF+C CQ Sbjct: 222 SADGSPGYFKFELNAYGREGLEC-KKCKTLITKVVINTRATFFCGSCQ 268 >gi|41409092|ref|NP_961928.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81700438|sp|Q73VL9|FPG_MYCPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|41397451|gb|AAS05311.1| Fpg [Mycobacterium avium subsp. paratuberculosis K-10] Length = 283 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLHAHVVGKTIGAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+G + +++VHLGMSG ++ P+ HV IS + T + + Sbjct: 61 KYLWLLLDGCDTALVVHLGMSGQMLLGAV--------PRAEHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DL+E P+ L +P D F+A + +K+S +K LL+ Sbjct: 110 ADQRTFGGWMLADLLEVDGSILPRPVAHLARDPLDPRFDAAAVVKVLRRKHSEIKRQLLD 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK+ R ++ L ++ +V+ DA+ GG Sbjct: 170 QQVVSGIGNIYADEALWRAKVHGARIAATMTGRQ------LTAVLDAAAEVMRDALAQGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ GE C CG ++RR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGREGESC-RRCGAVMRREKFMNRSSFYCPKCQ 278 >gi|297565906|ref|YP_003684878.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] gi|296850355|gb|ADH63370.1| formamidopyrimidine-DNA glycosylase [Meiothermus silvanus DSM 9946] Length = 274 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 136/292 (46%), Gaps = 29/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + T+ + + G+K++ +RR KY+ Sbjct: 1 MPELPEVETTRRILEPYLLGQTIQKLSHSDPTRYRH-----TELAHGRKVLGTTRRGKYM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +LEG L I+HLGM+G F H H +++ + Y DPR Sbjct: 56 LWQLEGGLEAIIHLGMTGGFRFTP-----------HTHTRLTVE----LPGRTLYYTDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +VE + L +GPEP F +K LL Q+ VAGI Sbjct: 101 RFGKWWVVEAGNYREIDLLGRIGPEPLSQEFTLPQFQRVLAGTRRRIKEVLLGQEAVAGI 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY E+LW++++ P R +L + +L + I+ V+ A++AGGS+L D Sbjct: 161 GNIYADESLWQSRIHPERPANTLKPAE------VKRLYKAIRDVMGRAVEAGGSTLSDNS 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G GYFQ + YG+ G+ C C I RIV GR T +C CQ+ Sbjct: 215 YQQPTGESGYFQFEHNAYGRPGQRCKRPGCTGKIARIVVGGRGTHFCPNCQR 266 >gi|159897723|ref|YP_001543970.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] gi|238687075|sp|A9B0X2|FPG_HERA2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159890762|gb|ABX03842.1| formamidopyrimidine-DNA glycosylase [Herpetosiphon aurantiacus ATCC 23779] Length = 273 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 152/290 (52%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLR-FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR+L + + L + P F+ A ++I V RRAK Sbjct: 1 MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLLIEL+ + ++IVHL M+G ++ +H HV ++L N + ++D Sbjct: 61 YLLIELDNHETLIVHLRMTGQMLVVAADEPAD----RHTHVVVALDNGRELR-----FHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 PR+FG LV+ S + LGPEP + F + +K + +K LL+Q ++A Sbjct: 112 PRKFGRWSLVDRSGVAALN--QRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALW AK+ P+R SL N + +L + I+ VL ++I+ G++L + Sbjct: 170 GVGNIYADEALWLAKIHPLRSANSLNANE------IAELFEAIKTVLRNSIEHRGTTLVN 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y G+ G Q YG+TGEPC CG I RIV A RST C CQ Sbjct: 224 YRDAYGASGENQYHLEAYGRTGEPC-RRCGTPIERIVVAQRSTHICPVCQ 272 >gi|120403164|ref|YP_952993.1| formamidopyrimidine-DNA glycosylase [Mycobacterium vanbaalenii PYR-1] gi|166215640|sp|A1T737|FPG_MYCVP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119955982|gb|ABM12987.1| DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium vanbaalenii PYR-1] Length = 293 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 99/306 (32%), Positives = 144/306 (47%), Gaps = 36/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + +H P +A I RR Sbjct: 1 MPELPEVEVVRRGLAEHVTGRTVTAVRVHHPRAVRRHEAGPADLTARLLDTTITGTGRRG 60 Query: 58 KYLLIEL-----------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 KYL + L E N +++VHLGMSG ++ A H + L + Sbjct: 61 KYLWLTLGDGADEPLARRESNFALVVHLGMSGQMLLGDVPNAN------HLRIAALLDDG 114 Query: 107 TNTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 T + + D R FG DLV P+ + +P D F+ + +K Sbjct: 115 TT-----LSFVDQRTFGGWMLADLVTVDGSDVPAPVAHIARDPLDPLFDRDAVVKVLRRK 169 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +S +K LL+Q +V+GIGNIY E+LWRAK++ R + + L +L+ Sbjct: 170 HSEIKRQLLDQTVVSGIGNIYADESLWRAKINGARLASGVSRA------KLAELLGAAAD 223 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ DA+ GG+S YV+++G GYF + YG+ GEPC CG ++RR RS+F Sbjct: 224 VMTDALAQGGTSFDSLYVNVNGESGYFDRSLDAYGREGEPC-RRCGAIMRRDKFMNRSSF 282 Query: 283 YCTYCQ 288 YC CQ Sbjct: 283 YCPRCQ 288 >gi|296393288|ref|YP_003658172.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] gi|296180435|gb|ADG97341.1| formamidopyrimidine-DNA glycosylase [Segniliparus rotundus DSM 44985] Length = 283 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHF-SAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + R F +AA + + V RR Sbjct: 1 MPELPEVEVVRRGLAEHLTGARIRALRVLHPRSARRHPGGGAFLAAALSERDVRAVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ S+++HLGMSG F + NP H V L + + + Sbjct: 61 KYLWLVLDDEESVVIHLGMSGQFRVGDQGVP---GNPAHLRVEADLADGRTLQ-----FF 112 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L E + P+ + +P D F+ + + K S +K LL+Q Sbjct: 113 DQRTFGGWEFAALQEVDGELVPAPVAHIARDPFDPKFDPAAVARRVRAKRSAIKRVLLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY E+LWRA+L + L +L+ + VL ++I GG+ Sbjct: 173 TVLSGVGNIYADESLWRARLHGEQPAAGLSPRKT------AELLDALAVVLGESITEGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G F + +VYG+ G+PC CG IRR RS+ YC CQ+ Sbjct: 227 SFDSLYVNVNGESGRFSDWLAVYGQEGKPC-RRCGSAIRREAFMNRSSHYCPRCQR 281 >gi|159902905|ref|YP_001550249.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9211] gi|238687193|sp|A9BDY5|FPG_PROM4 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|159888081|gb|ABX08295.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9211] Length = 286 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 29/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L +KN + ++ + R + F + SRR K Sbjct: 1 MPELPEVETVRKGLEKRLKNFYIDNVEVLSERSIASNGGSNVFIFNLKDLVFGRWSRRGK 60 Query: 59 YLLIEL--EGNL-------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 YL+ L E +L +++VHL M+G F + A H V N Sbjct: 61 YLIASLCKESDLIEEIPSGTLVVHLRMTGYFEWHQNTKA----PCTHTRVRF-----WNK 111 Query: 110 KKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 K + + D R FG M + + L+ LGPEP FN YL + + ++ Sbjct: 112 KGSEIRFIDIRNFGQMWWIPPNKLPSEVINGLKNLGPEPFSKDFNPEYLKYCLKGRKRSI 171 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K++LL+Q I+AG+GNIY E+L+ A ++PI+ + L L KL + + ++L Sbjct: 172 KSSLLDQSILAGVGNIYADESLFEAGITPIKASGDLNGCE------LKKLCKSLTRILKA 225 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I GG++ D+ ++G G + VY + +PC CG +I + AGRST +C C Sbjct: 226 SIGKGGTTFSDFRDLEGLNGTYGGYAWVYRRNQKPC-RKCGTLIEKTKVAGRSTHWCPNC 284 Query: 288 Q 288 Q Sbjct: 285 Q 285 >gi|320008313|gb|ADW03163.1| formamidopyrimidine-DNA glycosylase [Streptomyces flavogriseus ATCC 33331] Length = 285 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 150/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + H + +R F+A RG + RR Sbjct: 1 MPELPEVEVVRRGLERWTAGRTVEAVEVLHPRAVRRHLAGGADFAARLRGLRFGTAMRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+ + S++ HLGMSG +++ + +H + I + T+ + + Sbjct: 61 KYLWVPLDEADSSLLGHLGMSGQLLVQPEDAV----DEKHLRIRIRFDDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D +F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDAAFHLALRLRRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T SL + +L+ ++ V+ +A+D GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTASLTRPRT------AELLGHVRAVMREALDQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|21223929|ref|NP_629708.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|256784972|ref|ZP_05523403.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289768865|ref|ZP_06528243.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|7531122|sp|Q9ZBQ6|FPG_STRCO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|4007732|emb|CAA22416.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|289699064|gb|EFD66493.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 286 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV D+ + H + +R P F+ + +I SRR Sbjct: 1 MPELPEVEVVRRGLERWAAHRTVADVEVLHPRAVRRHVAGPDDFAHRLKDHRIGTPSRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + +++ HLGMSG +++ +H + + + T+ + + Sbjct: 61 KYLWLPLEDTDQAVLAHLGMSGQLLVQPHETPA----EKHLRIRVRFADALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +TS + + +P D F+ H +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTSADGLPDVIAHIARDPLDPLFDDEAFHHALRRKRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA+L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGMPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|157412690|ref|YP_001483556.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9215] gi|166988462|sp|A8G2Y9|FPG_PROM2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|157387265|gb|ABV49970.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9215] Length = 293 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 38/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + N + + + R + FP F + +RR Sbjct: 1 MPELPEVETVRRGLEQKLNNFIIKKVEVCRDS-TVAFPNKKEDFIGGLNNSLLYKWNRRG 59 Query: 58 KYLLIELE----------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 KYL+ EL+ N +IVHL M+G F + S + +H + + Sbjct: 60 KYLIAELKKLGNENGRFPLEKFSKNNGFLIVHLRMTGYFKFINNSA----QPCKHTRIRV 115 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQ 159 + K + Y D R FG M ++ L L +LGPEP F+ IYL Sbjct: 116 F-----DNKNNELRYIDVRSFGQMWWIKEGLSPNKIIKGLGSLGPEPFSKDFDEIYLKKV 170 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 K+ ++K LL+Q IVAGIGNIY E+L+ A +SP R+ R++ +N L KL + Sbjct: 171 ISKRTKSIKAILLDQTIVAGIGNIYADESLYSAGISPFREARTIKKNE------LIKLKE 224 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I VL ++I +GG++ D+ ++G G F +VY +TG+ C CG +I R +GR Sbjct: 225 SIVTVLKNSIGSGGTTFSDFRDLEGENGNFGLQTNVYRRTGKEC-RKCGNLIERKKISGR 283 Query: 280 STFYCTYCQK 289 ST +C CQK Sbjct: 284 STHWCPKCQK 293 >gi|302525052|ref|ZP_07277394.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302433947|gb|EFL05763.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 137/296 (46%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TV + + H + +R F+ G I RR Sbjct: 1 MPELPEVETVRAGLEAHVAGRTVRAVEVLHDRAIRRHAQGAADFTGRLAGVAIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ + +H V + + + + Sbjct: 61 KYLWLELSDGEAVLAHLGMSGQMLVQPEGAP----DEKHLRVRVRFADG----GPELRFV 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG +LV + + +P D F+ + + +K ALL+Q Sbjct: 113 DQRTFGGLALDELVVVDGDSLPGTIAHIARDPMDPKFDPEAAVRALRSRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR+KL R T L G L+ V+ A+ AGG+ Sbjct: 173 TLVSGVGNIYADEALWRSKLHWSRPTEKLTAAQG------RTLLSAASDVMSAALLAGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF+ + YG+ G PC CG IRR RS+F C CQ+ Sbjct: 227 SFDALYVNVNGESGYFERSLDAYGQEGLPC-RRCGSPIRREPFMNRSSFSCPRCQR 281 >gi|37522976|ref|NP_926353.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] gi|39931205|sp|Q7NFW7|FPG_GLOVI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|35213979|dbj|BAC91348.1| formamidopyrimidine-DNA glycosylase [Gloeobacter violaceus PCC 7421] Length = 284 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 141/294 (47%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIID-VSRRA 57 MPELPEVE +RR+L++ + V + + R + P F +G+ D + RR Sbjct: 1 MPELPEVETLRRDLLIHLPGERVVGVEVLRSDSVGYPADPAIFIEQMQGQIFSDRMLRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL+ ++ VHL MSG + H V I + + + + + Sbjct: 61 KYLLLYFARGAALGVHLRMSGRLLWRCGEAPL----EPHTRVRIPMASG-----HELRFE 111 Query: 118 DPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + L+ + L LGPEP F+ YL +F +N +K+ALL+Q+ Sbjct: 112 DMRVFGRLWLIPVGVPPERVMGGLTRLGPEPFAEMFDGPYLAGRFAGRNQPVKSALLDQQ 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAG+GNIY EAL+ + + P L L +L + + KVL I G++ Sbjct: 172 LVAGVGNIYADEALFSSGIHPALPVGGLDAA------ALERLHRAVVKVLEAGIAQRGAT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LR+Y G G + VYG+ G+PC C I RI AGRST +C CQ+ Sbjct: 226 LRNYTDAQGINGNYAGTAWVYGRKGQPC-RVCNTPIERIRLAGRSTHFCPTCQR 278 >gi|119717504|ref|YP_924469.1| formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|166215641|sp|A1SLU7|FPG_NOCSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|119538165|gb|ABL82782.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardioides sp. JS614] Length = 295 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + H + +R D P F+AA G++I RR Sbjct: 1 MPELPEVEVVRAGLERHVLGATIARVDVLHPRPVRRDLRGPAGFAAALTGRRIEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG ++ +P P H+ + L + + + Sbjct: 61 KYLWLPLDNGDALLGHLGMSGQLLV------QPPDAPDERHLRVRLALEGADEGRELRFV 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + V P + + +P D F+ + ++ S +K LL+Q ++ Sbjct: 115 DQRMFGGLS-VSAGGADLPPEIAHIARDPLDPEFDDDDFVRRVRRRTSGVKRQLLDQNLI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA++ R L + +L+ ++V++ A+ GG+S Sbjct: 174 SGVGNIYADEALWRARIHGERPGDRLTATR------VRELLAHAREVMLAALGEGGTSFD 227 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ GE C CG IRR+ RS+++C CQ Sbjct: 228 ALYVNVNGESGYFDRSLHAYGREGEAC-ERCGTPIRRVAFMNRSSYFCPVCQ 278 >gi|258404392|ref|YP_003197134.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] gi|257796619|gb|ACV67556.1| formamidopyrimidine-DNA glycosylase [Desulfohalobium retbaense DSM 5692] Length = 274 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + + + L R + G+ I V RRAK L Sbjct: 1 MPELPEVETIARGLDAALTGQHIASVHLRRDAVACGDAQRIREDVPGRCIKRVWRRAKLL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++ + ++ HL MSG ++ + +H L + + ++ D R Sbjct: 61 LVDCVPDRHLVFHLKMSGKLLLGGPLAGQ----EKHVQAWFGLQSGES-----FVFQDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG++ L + + ++P +LGPEP D + + + +K+ LL+Q ++AGI Sbjct: 112 KFGYIRLFDGAELAKWPFFASLGPEPFD--LDGPGFARILSGRRARIKSLLLDQTVIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P L L +L+ + L +GGSSLRDYV Sbjct: 170 GNIYADEALFRAGIHPATPADRLSPG------ALNRLVYALHAALNKGFASGGSSLRDYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G QN F VYG+ G C CG+ + R AGR++ +C CQ Sbjct: 224 DALGKRGSHQNEFQVYGRCGASC-PCCGRCLERTTVAGRTSTFCPRCQ 270 >gi|302558161|ref|ZP_07310503.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302475779|gb|EFL38872.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 286 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D + H + +R F+ +G ++ RR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADAEVLHARAVRRHLAGADDFAHRLKGHRVGVPRRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + S++ HLGMSG +++ + + +H V + T++ +T+ + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAP----DEKHLRVRVRFTDSLDTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + + +P D F+ + + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPEGLPDVIAHIARDPLDPLFDEEAFHRALRSRRTTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ R T + L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYERPTAGFTRPRTL------LLLGHVRDVMNAALSQGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS++YC CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCGTPMRRRAWMNRSSYYCPRCQR 280 >gi|227833426|ref|YP_002835133.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|262184416|ref|ZP_06043837.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] gi|254789433|sp|C3PH91|FPG_CORA7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|227454442|gb|ACP33195.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 282 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + + + +H SA G+KI V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPYVVGRSFAAVEVHHPRANRGQEAPLSALLVGRKIAAVARRGKFM 60 Query: 61 LIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E + +HLGMSG I HV I+ + T R Sbjct: 61 WLEFADEDHSDPARDVLFIHLGMSGQVRIGEVDSP---------HVRIAAVLDDTT---R 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ L + + + P+P + F+ + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWRLGP------WLSMAHIAPDPLETDFDLTAAGRRLRAKRTVVKAALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALW ++SP++K +L Q + +I V+ A+ GG Sbjct: 163 QTVLSGVGNIYADEALWAVQISPLKKASALRQRDAV------AVISAAADVMRAALAVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + VYG+ G+PC CG+ I + V GR T YC CQ Sbjct: 217 TSFDALYVNVNGESGYFDRSLHVYGRGGQPC-ERCGEEILKTVLGGRGTHYCPSCQ 271 >gi|186684064|ref|YP_001867260.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] gi|238689422|sp|B2J5G0|FPG_NOSP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|186466516|gb|ACC82317.1| formamidopyrimidine-DNA glycosylase [Nostoc punctiforme PCC 73102] Length = 291 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L + N +T D+ L+R F I RR K Sbjct: 1 MPELPEVETVRKGLNQLTLNQEITGGDVLLNRTIAYPFSVGEFVDGIEKNAIATWHRRGK 60 Query: 59 YLLIELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 YLL EL + VHL M+G + H P H H + L + + Sbjct: 61 YLLAELSSPCSTSWLGVHLRMTGQLLWLHRD------EPLHKHTRVRLFFGDQQE---LR 111 Query: 116 YNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D R FG + V + + L L +P F+ YL + + +K ALL+ Sbjct: 112 FVDQRTFGKIWWVPPGVAVESIITGLAKLAADPFSPEFSVEYLASKLKNRRRPIKTALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAG+GNIY EAL+++ + P L + L I +VL +I+AGG Sbjct: 172 QSVVAGLGNIYADEALFKSGILPETLCIDLQLKQ------IELLRTAIIQVLETSIEAGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +++++ G+ G + VY + GEPC CG I+RI AGRS+ +C+ CQ Sbjct: 226 TTFSNFLNVKGTNGNYGGVAWVYNRAGEPC-RVCGMPIQRIRLAGRSSHFCSECQ 279 >gi|311739749|ref|ZP_07713584.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305565|gb|EFQ81633.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + S GK++ V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEPLSGLLIGKEVAAVARRGKFM 60 Query: 61 LIELEGN-------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E G + +HLGMSG I T H+ IS + Sbjct: 61 WLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTTDSP---------HLRIS---AQLSGGVE 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ + + +G +P + F+ + + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWLYAP------WAKISHIGIDPLEPDFDIVATARRLRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ GG Sbjct: 163 QTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLEAAQEVMAAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQ-RCGTPLERCVISGRSTHFCPHCQ 271 >gi|254392459|ref|ZP_05007639.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] gi|197706126|gb|EDY51938.1| formamidopyrimidine-DNA glycosylase lyase mutM [Streptomyces clavuligerus ATCC 27064] Length = 286 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 152/291 (52%), Gaps = 19/291 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH--HFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + T+ ++ + H + +R F+A +G + RR KYL Sbjct: 1 MPEVEVVRRGLQRWVSGRTIAEVRVLHPRAVRRHIAGAGDFAARLKGHSVGIARRRGKYL 60 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + + S++ HLGMSG +++ A + +H + IS ++ T+ + + D Sbjct: 61 WLPLADTDSSVLGHLGMSGQLLVQPEDAA----DEKHLRIRISFDDSLGTE---LRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L + + + + +P D +F+ K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHDNTPDGLPDVIAHIARDPLDPAFDDDAFHAALRAKRTTVKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T SL + +L+ I+ V+ A+ AGG+S Sbjct: 174 VGNIYADEALWRARLHYERPTASLTRPRS------AELLGHIRDVMNAALAAGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ GEPC CG +RR RS+++C CQ+ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGEPC-RRCGTPMRRRPWMNRSSYFCPRCQR 277 >gi|93117333|gb|ABE99584.1| fpg [Neisseria meningitidis] Length = 249 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 140/263 (53%), Gaps = 14/263 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYL++ + ++ Sbjct: 1 RGIAPHIEGKTVEAVVLRQLKLRWQVNPDLGEILSGRQVLSCGRRAKYLIVRFQTG-ILL 59 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + K +H+HV I ++ T + Y DPR+FG + E Sbjct: 60 IHLGMSGSLRIFTPSDGRIGKPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP F A YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 114 IEEHHPLLEKLGPEPLSEVFCADYLYARLKTQKRAVKLALMDNAVVVGVGNIYANESLFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 AGISPHRPANRLKKKE------CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQ 227 Query: 252 AFSVYGKTGEPCLSNCGQMIRRI 274 ++VYG+ +PC CG ++ + Sbjct: 228 EYTVYGRHNQPC-PQCGGLVVKE 249 >gi|270308552|ref|YP_003330610.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] gi|270154444|gb|ACZ62282.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. VS] Length = 270 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + +T I F+ G ++ ++SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRIEALWAKTLCPPETEFNKLVSGLQVTELSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L G L I VHL MSG +P P+ L N +V + D R Sbjct: 61 IISLSGGLFISVHLKMSGGLTAVKAENGQP---PRFTRAVFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ + L LGPEP + F L+ + ++ +K LL+Q+++AG+ Sbjct: 113 KFGRINLLTS----LDTILEKLGPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L++A L+P+R SL + + L I+ VL AI G+S+ Y Sbjct: 169 GNMYADETLFKACLNPLRPADSLSKAE------VINLHSAIRSVLYKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ ++C +CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGESC-PICGAPITRQLIRQRACYFCPHCQ 269 >gi|255325274|ref|ZP_05366380.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] gi|255297839|gb|EET77150.1| DNA-formamidopyrimidine glycosylase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + S GK++ V+RR K++ Sbjct: 1 MPELPEVESVRRGLEPHVVGRTFESVQVLHPRANRGQDEPLSGLLIGKEVAAVARRGKFM 60 Query: 61 LIELEGN-------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +E G + +HLGMSG I T H+ IS + Sbjct: 61 WLEFVGEDSMDPHRDVLFIHLGMSGQVRIGTTDSP---------HLRIS---AQLSGGVE 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ + + +G +P + F+ + + K + +K ALL+ Sbjct: 109 LSFVDQRTFGYWLYAP------WAKISHIGIDPLEPDFDIVATARRLRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + +GIGNIY E+LW A++ P ++ +L Q + L++ Q+V+ A+ GG Sbjct: 163 QTLASGIGNIYADESLWAAQIPPRKRASTLRQKDAV------ALLESAQEVMTAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + + YG+ G+PC CG + R V +GRST +C +CQ Sbjct: 217 TSFDSLYVNVNGESGYFSRSLAAYGRAGQPCQ-RCGTPLERCVISGRSTHFCPHCQ 271 >gi|300780911|ref|ZP_07090765.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300532618|gb|EFK53679.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 278 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 16/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + T + + + G + RR K++ Sbjct: 1 MPELPEVEVVRRGLDTHIVGSTFDTVEVLHPRAVRGNDVDLTEILPGLSVTGTGRRGKFM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS-LTNNTNTKKYRVIYNDP 119 +EL +++VHL MSG I+ H+ I L + + + + + D Sbjct: 61 WLELSDGAAVMVHLRMSGQMIVGEPGLVDS------PHLRIRALMHGVGSAPFELDFIDQ 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + + + P+P + F+ + KKN +K LL+Q +V+G Sbjct: 115 RTFGSWQYTQL-IDGIPAAIPHIAPDPFETDFDPVATARAIRKKNVAIKTVLLDQSVVSG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 IG+IY EA+W A + P RK R+L Q + +L++E + V+ A+ AGG+S Sbjct: 174 IGSIYADEAMWAAWIKPTRKGRALRQRDAV------RLLEESRAVMARALQAGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G+ GYF + + YG+ EPC CG I R V GRS+++C CQ Sbjct: 228 YVNVNGASGYFSRSLNAYGQADEPCA-RCGTPIARTVVNGRSSYFCPVCQ 276 >gi|160900861|ref|YP_001566443.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] gi|160366445|gb|ABX38058.1| formamidopyrimidine-DNA glycosylase [Delftia acidovorans SPH-1] Length = 276 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + L + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRRAFAAQIAGARIESVALGKP-LRWPL-GIAPELLAGRDVHGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL L +++HLGMSGS A H+H + T K + +DPR Sbjct: 59 LMELSEGL-LMLHLGMSGSLRFVAPHEAPLGPAGTHDHFDL------QTSKGLLRLHDPR 111 Query: 121 RFGF-MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG M + S + L LG EP D+SF+ + +K LLN +V G Sbjct: 112 RFGAVMYVAAESDPWARRLLDHLGMEPLDDSFSFETFRAGLKASRTPIKQLLLNGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ A+++P + + + +L +EI++VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFMARIAPTQPACEVGPR------KVRRLFEEIRRVLALAVEQGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG G+FQ VYG+ G PC CG ++ + Q RST++C CQK Sbjct: 226 SAPDGMAGHFQLQAKVYGREGLPCTH-CGSPVQMLRQGQRSTYFCARCQK 274 >gi|300087227|ref|YP_003757749.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526960|gb|ADJ25428.1| formamidopyrimidine-DNA glycosylase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 271 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 150/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + +++ +T + +H +R P FSA G+++ V RR KY Sbjct: 1 MPELPEVETVTNEIRPYVQDRVITGVVVHWPGTVRGHSPAQFSADLEGRRVTGVFRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL+ ++ HL M+GS I + +P + V I L + RVI+ DP Sbjct: 61 IVWELDDGNRLLTHLKMTGSLI----ALGPDDDDPPYVRVEIRLDDGR-----RVIFRDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG M LV L LGPEP + F A K+ S +K ALL+Q ++AG Sbjct: 112 RKFGRMALV----GEASGVLAGLGPEPLADEFTAEVFESLLRKRKSPVKTALLDQTLMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y EAL A + P+R SL D +L I+++L AIDA G+S+ +Y Sbjct: 168 IGNMYADEALHSAGIHPLRPADSLD------TDEYRRLYLAIRRILRSAIDARGASISNY 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +G+ AF V K GE C CG + RIV GR T+ C CQ+ Sbjct: 222 IRPGGDLGHAHFAFKVAHKRGENC-RGCGTPLERIVIRGRGTYLCPACQR 270 >gi|240169619|ref|ZP_04748278.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 283 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 149/296 (50%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLAAHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARITGTDRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + +++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWLTLNSPDSALVVHLGMSGQMLL--------GVVPRSDHVRISALLDDGTV---LSF 109 Query: 117 NDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG DLV P+ L +P D F+A + K+S LK LLN Sbjct: 110 ADQRTFGGWLLADLVTVDGSVVPAPVAHLARDPLDPRFDARAVVEVLRGKHSELKRQLLN 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++V+GIGNIY EALWRAK++ R +L + L ++ +V+ +A+ GG Sbjct: 170 QEVVSGIGNIYADEALWRAKVNGARVAATLTRRQ------LGAVLDAAAEVMREALAKGG 223 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ G+ C CG +IRR RS+FYC CQ Sbjct: 224 TSFDSLYVNVNGESGYFDRSLDAYGRDGQNC-RRCGAVIRREKFMNRSSFYCPRCQ 278 >gi|45644628|gb|AAS73016.1| predicted formamidopyrimidine-DNA glycosylase [uncultured marine gamma proteobacterium EBAC20E09] Length = 269 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + + +H +NLR+ KK+ +SRRAKY+ Sbjct: 1 MPELPEVETTVRAINKF-ENKRLLKVIIHNRNLRWKVDRIIEKKIDNKKVRSISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ +L I++HLGMSG+ I+ + +H+H + +I+ND R Sbjct: 60 LIQF-KDLFIMLHLGMSGNLRIQKNNNNYFK---KHDHAEFVFKDEK------IIFNDVR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L T Y + ++ LG EP + F+ YL N +K L++QK + G+ Sbjct: 110 RFGSIHL--TKNPYDHKLIKDLGIEPLSDQFDKDYLYRICSNSNLQIKKLLMDQKKIVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ + +SP R L + + L I+ VL +AI+ GG++L+D+ Sbjct: 168 GNIYASESLFLSNISPERICNRLSVKDCSN------LSNSIKAVLNEAINMGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG+ GYF+ +VYG+ G+PC S C +I + + RS+F C+ CQ Sbjct: 222 SADGNQGYFKIKLNVYGRDGQPCNS-CNNIITKKIIGQRSSFMCSECQ 268 >gi|118582007|ref|YP_903257.1| formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] gi|166198725|sp|A1AV29|FPG_PELPD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118504717|gb|ABL01200.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Pelobacter propionicus DSM 2379] Length = 267 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + V + + LR P A +G+ + V RR KYL Sbjct: 1 MPELPEVELTRRRLERDITGKQVQQVLVRAPKLRLPVPPELEEALKGRTVRAVERRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E E +IVHLGM+G + HT P +H+HV I T+ + + ++DPR Sbjct: 61 LLECEAG-WLIVHLGMTGFLRLLHT----PQLPGKHDHVDIVFTDGSVLR-----FHDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + T ++P L +GPEP +F+ YL + +K ++N IVAG+ Sbjct: 111 KFGTIAW-TTDSLDKHPLLAGIGPEPLTAAFSGAYLFRVSRTRRVVVKLLIMNMAIVAGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+RA + P R SL + +L I++VL ++ID G + Y Sbjct: 170 GNIYANEALFRAGIRPDRAASSLSRTE------CERLAVTIREVLQESIDLGST----YR 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G++ Y AF VYG+ C S CG + + RST +C CQ+ Sbjct: 220 VEEGTVTYHPLAFDVYGRGHGTCTS-CGGALEAVRLGNRSTVFCPRCQQ 267 >gi|297559195|ref|YP_003678169.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843643|gb|ADH65663.1| formamidopyrimidine-DNA glycosylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 284 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + P F+A G+ RR Sbjct: 1 MPELPEVEVVRRGLAEHALGRTVGAVEVLHPRAVRRYLPGPADFAARLSGRVPTAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ ++ HLGMSG +++ + +H V + L++ T + + Sbjct: 61 KYLWLVLDNGEMLLTHLGMSGQMLVQPEG----KPDERHLRVRLPLSDGTELR-----FV 111 Query: 118 DPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + + ++ P + + +P D F A + + +K ALL+Q + Sbjct: 112 DQRTFGHLMVDVPGVREDVPSSVDHIALDPLDPDFVAEDFVRALRARRTEVKRALLDQSL 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R TR L +L+ + +V+ +A++ GG++ Sbjct: 172 ISGVGNIYADEALWRSRLHWARSTRELSDAEAV------ELLGHVGQVMNEALEVGGTTF 225 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF+ + YG+ PC CG +I R RS++ C CQ+ Sbjct: 226 DGLYVNVNGESGYFERGLNAYGRRDRPCG-RCGALIVREAFMNRSSYSCPTCQR 278 >gi|4511987|gb|AAD21547.1| formamidopyrimidine-DNA glycosylase [Zymomonas mobilis subsp. mobilis ZM4] Length = 252 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 148/270 (54%), Gaps = 19/270 (7%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 + D+ + R +LR P G II +SRRAKY +I + + ++I HLGMSG Sbjct: 2 GEKIIDVKVRRASLRRPIPSDIQERLIGSTIISLSRRAKYGIIVNDRDDALIFHLGMSGR 61 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + I P +H+H + NN + V DPRRFG +DLV+ + ++ Sbjct: 62 WKIN------PENFEKHDHFVLQTKNN-----FIVSLYDPRRFGSLDLVKKNQLLEWSYF 110 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 R +GPEP +FN YL + ++ ++ LL+QK+VAGIGNIY CEAL +AK+ P R Sbjct: 111 RNIGPEPLTGNFNPEYLQKKLFSSSAPIREILLDQKVVAGIGNIYACEALHQAKIHPQRP 170 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 +++L D + L+ I+ +L AI GGS+L+DY +G +GYF F VYGK Sbjct: 171 SKNL------NFDEITSLVFSIKNILQKAIAEGGSTLKDYARPNGELGYFSTKFKVYGKE 224 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GE C CG I R GRSTF C+ CQK Sbjct: 225 GEQCE--CGHTIERYTLGGRSTFLCSSCQK 252 >gi|317125434|ref|YP_004099546.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315589522|gb|ADU48819.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 292 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 19/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ + +T + P + G + SRR Sbjct: 1 MPELPEVEVVRRGLLDHVVGRHITRAAITGLRVARRHVAGPEDLADRVSGTTVTAASRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G+ ++I+HLGMSG +++ + +H H ++ ++ + Sbjct: 61 KYLWLVLDGDEALIIHLGMSGQMLVKPADAPR----EKHCHAAFDFADD----GPQLRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + L +R + P+P + F+ + + + + S +K ALL+Q +V Sbjct: 113 DQRTFGGLALSPLGTDGIPDAVRHIAPDPFEPVFDQVSVVRRMKARESAVKRALLDQSLV 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRA++ R SL K +L +++ ++V+ +A+ GG+S Sbjct: 173 SGIGNIYADEALWRARVHGERVCASLT------KPVLSRVLDHAREVMAEALTQGGTSFD 226 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G+ GYF + YG+ G PC CG +RR RS+F C CQ Sbjct: 227 ALYVNVNGASGYFDRSLHAYGRDGTPCD-RCGARMRREQFMNRSSFSCPACQ 277 >gi|296171391|ref|ZP_06852724.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894166|gb|EFG73925.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 286 Score = 264 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P +A +I RR Sbjct: 1 MPELPEVEVVRRGLQAGVVGKTITAVRVHHPRAVRRHEAGPADLTARLLDARITGTDRRG 60 Query: 58 KYLLIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + L+G + +++VHLGMSG ++ + P+ +HV IS + T Sbjct: 61 KYLWLVLDGPGQPDTALVVHLGMSGQMLL--------GEVPRADHVRISALLDDGTV--- 109 Query: 114 VIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG DLVE P+ L +P D F+ + +K+S +K Sbjct: 110 LSFADQRTFGGWMLADLVEVDGSVVPAPVAHLARDPLDPRFDRDAVVDVLRRKHSEIKRQ 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALWRAK++ R +L + L ++ +V+ DA+ Sbjct: 170 LLDQTVVSGIGNIYADEALWRAKVNGARIAATLSRRR------LGAVLDAAAEVMRDALS 223 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + YG+ G+ C CG ++RR RS+FYC CQ Sbjct: 224 QGGTSFDSLYVNVNGQSGYFDRSLDAYGREGQNC-RRCGAVMRREKFMNRSSFYCPKCQ 281 >gi|319440518|ref|ZP_07989674.1| hypothetical protein CvarD4_02017 [Corynebacterium variabile DSM 44702] Length = 290 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + P A +I + RR Sbjct: 1 MPELPEVEVVRRGLAEHITGATIVGTEVLHPRAVRGQPGGAAALEAGLEDARITALRRRG 60 Query: 58 KYLLIELEGNLS-----------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS-LTN 105 KYL I+LE ++VHLGMSG ++ H+ I L Sbjct: 61 KYLWIDLEYPRGGQGSGQSSGRCLLVHLGMSGQMLLGEPGQVTS------PHLRIRSLLV 114 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 ++ + + D R FG +L + P + +P D +F+A + KK S Sbjct: 115 TDTGRELELSFVDQRTFGRWELTAPGVTDPVP---HIAVDPLDAAFDAAHTARVIRKKRS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +V+GIGNIY EALW A++ P +K ++ Q + L+ +V+ Sbjct: 172 EIKRVLLDQTVVSGIGNIYADEALWAAQVHPRKKATAMRQTDVIS------LLDAATEVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ AGG++ D YV+++G+ GYF + +VYG+ GEPC CG + R RS+ +C Sbjct: 226 TRALAAGGTTFDDLYVNVNGASGYFSRSLNVYGREGEPC-PRCGTPVVREQWTNRSSHFC 284 Query: 285 TYCQK 289 CQ+ Sbjct: 285 PECQR 289 >gi|297202625|ref|ZP_06920022.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713200|gb|EDY57234.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 286 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + F+ G ++ SRR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVAEAEVLHPRAVRRHLAGAEDFAHRLEGHRVGTPSRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + S++ HLGMSG +++ + + +H + + + +T+ + + Sbjct: 61 KYLWLPLEDTDQSVLAHLGMSGQLLVQPHAAP----DEKHLRIRVRFADEVDTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L + + + + +P D F+ +K S +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFHQALRRKRSTIKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR+++ R T + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRIHYERPTAGFTRPRT------AELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC CG +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-KRCGTPMRRRPWMNRSSYFCPRCQR 280 >gi|330994261|ref|ZP_08318189.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] gi|329758728|gb|EGG75244.1| Formamidopyrimidine-DNA glycosylase [Gluconacetobacter sp. SXCC-1] Length = 275 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 153/277 (55%), Gaps = 19/277 (6%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ T++ H LR+ FP + A G+++ +RR KY+LI L G + ++VHLGM Sbjct: 2 HLEGHTISRASTHHTGLRWPFPPGLADALAGRRVDGFARRGKYILITLSGGMVLVVHLGM 61 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SG ++ ++ A + H H+ I R DPRRFG +DLV S + Sbjct: 62 SGRVLL--STPAGTVSPALHEHLVIETAEGA-----RCGLVDPRRFGMVDLVPASAVEGH 114 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 L +GPEP N F+ +L + + S++K LL+Q++VAG+GNIYV EAL+RA + P Sbjct: 115 RLLAGMGPEPLGNRFDGAWLAARGRGRRSSIKALLLDQRVVAGLGNIYVSEALFRAGIHP 174 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + +L EI+ VL +AI AGGSSLRDYV DG +GYFQ+A+ VY Sbjct: 175 ACAAGDVSGAE------YDRLATEIRAVLEEAIAAGGSSLRDYVQPDGELGYFQHAWRVY 228 Query: 257 GKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G+ C CG + RI Q+GRSTF+C Q Sbjct: 229 GRAGQGCPDCPGPPVCGG-VVRITQSGRSTFFCPRRQ 264 >gi|323699537|ref|ZP_08111449.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. ND132] gi|323459469|gb|EGB15334.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans ND132] Length = 272 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L + T+ + + + G+ I V RRAK L Sbjct: 1 MPELPEVEVIARGLDASVTGRTIESVEVPGLTRLSEPEETLVPKVLGRTITHVRRRAKVL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ HL M+G + A+ +H+ + L + + + + D R Sbjct: 61 LVELDNGSTLAFHLKMTGRVVHGPKRAAQ-----RHDRILFHLDDGSM-----LYFADMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG++ + L GPEP + + L + +N +K LLNQ +VAG+ Sbjct: 111 KFGYVRCFAADELDCWDFLCKAGPEPLETA--PEALAERVTGRNCAIKALLLNQSVVAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+RA ++P + + + D +L +Q VL AI GSS+ DYV Sbjct: 169 GNIYADESLFRAGINPETRGSRVGR------DRAVRLFTALQAVLRQAIAENGSSISDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQN+F+VYG+ GEPC CG+ +R + AGR++ +C CQ+ Sbjct: 223 NAHGDAGAFQNSFNVYGRKGEPC-RACGETLRAVTVAGRTSTFCPRCQR 270 >gi|188524384|ref|ZP_03004411.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273789|ref|ZP_03206323.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|195660050|gb|EDX53430.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249544|gb|EDY74326.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] Length = 277 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H K L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N ++ YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKFYYQPKD---EWFNLAHTHIIIEFENG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L + + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDLTIKD------YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC + CG +IR+ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPCQT-CGTIIRKTKVNGRGTYYCSNCQ 274 >gi|33239822|ref|NP_874764.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39931231|sp|Q7VDK6|FPG_PROMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33237348|gb|AAP99416.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 283 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 143/299 (47%), Gaps = 26/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE ++R L +K+ + D+ + R F G K + +RR K Sbjct: 1 MPELPEVETVKRGLKNRLKDFYIHDVEVITPRSISSEGGSKAFVKNIIGLKSGEWTRRGK 60 Query: 59 YLLIELEGNL------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ L + +VHL M+G F K K+ +H V I N Sbjct: 61 YLICSLHSSDREEIAGWWVVHLRMTGQFQWF----QKKTKSCKHTRVRI-----WNKDGA 111 Query: 113 RVIYNDPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M + + + L+ LGPEP FN YL K+ ++K++ Sbjct: 112 EIRFVDTRNFGQMWWISPTFLPTEKITGLKKLGPEPFSKEFNPFYLQESLKKRKRSIKSS 171 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q IVAG GNIY E+L++A + P ++++ L + + K+ + +L +I Sbjct: 172 LLDQSIVAGAGNIYADESLFQAGILPTKESKKLNKTE------IKKICTSLTHILKISIG 225 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S +D+ ++G G + VYG+ +PC CG I + AGR T +C CQK Sbjct: 226 EGGTSFKDFRDLEGVNGKYGGQAWVYGRENKPC-RKCGVKILKAKVAGRGTHWCPNCQK 283 >gi|300783720|ref|YP_003764011.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299793234|gb|ADJ43609.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 289 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + + T+ + + H + +R F+ G ++ RR Sbjct: 1 MPELPEVEVVRLGLQVHVAGRTIREAEVLHPRAIRRHALGAEDFTQRLAGTRVEAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL +EL +++ HLGMSG +++ + +H V + ++ + + Sbjct: 61 KYLWLELSDKEALLAHLGMSGQMLVQPEGAP----DEKHLRVRLRFEDD----GPELRFV 112 Query: 118 DPRRFGFMDLVE----TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + L + S + + +P D F+ + + +K ALL+ Sbjct: 113 DQRTFGGLALDDLSDIGSEVLLPDTIAHIARDPMDPEFDLDAAVRALRSRRTEVKRALLD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA+L R T L G +L+ V+ A+ AGG Sbjct: 173 QTLVSGIGNIYADEALWRARLHWARPTEKLTMAKG------RELLSAASDVMNAALGAGG 226 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + YG+ G PC CG IRR RS+F C CQ Sbjct: 227 TSFDALYVNVNGQSGYFDRSLDAYGQEGMPC-HRCGTAIRREPFMNRSSFSCPRCQ 281 >gi|38234118|ref|NP_939885.1| formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|81698520|sp|Q6NGH4|FPG_CORDI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|38200380|emb|CAE50068.1| Putative formamidopyrimidine-DNA glycosylase [Corynebacterium diphtheriae] Length = 296 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 27/304 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+TD+ + + +G+++ + RR Sbjct: 1 MPELPEVEVVRRGLTPYVLGATITDVAVEHPRSIRTIEGGAAELIGSLQGREVTRIGRRG 60 Query: 58 KYLLIELEGNL---------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L EL G+ ++VHLGMSG +I+ + A H + ++ + Sbjct: 61 KFLWFELTGHGDYACGFPQQGLLVHLGMSGQMLIKTQNSALH----PHRRIRTTIVRSDA 116 Query: 109 TKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + + + D R FG+ VET+ + + + D L KKNS Sbjct: 117 QECFELWFVDQRTFGYWAPTTFVETAHGCVPEQITHIARDLLDPQLKRENLARLIRKKNS 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LLNQ+IV+GIGNIY E LW A++ P L L L++ Q+V+ Sbjct: 177 EIKRVLLNQEIVSGIGNIYADEMLWAARIHPQTPASHLSVAQ------LSNLLEHGQRVM 230 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+D GG+S YV+++G GYF + YG+ G+ C CG I R A RS+ +C Sbjct: 231 NAALDQGGTSFDSLYVNVNGQSGYFDVSLHAYGQQGQACD-RCGSNIIREKFANRSSHFC 289 Query: 285 TYCQ 288 CQ Sbjct: 290 PRCQ 293 >gi|33860886|ref|NP_892447.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39931224|sp|Q7V2X4|FPG_PROMP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33633828|emb|CAE18787.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 292 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 149/308 (48%), Gaps = 35/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPH-HFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +KN + + + + + F + + +RR K Sbjct: 1 MPELPEVETVRRGLEQKLKNFIIKRVEICRESTVAYPIDKIDFIEGLQNSLLYKWNRRGK 60 Query: 59 YLLIELEG---------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 YL+ EL+ N ++VHL M+G F +T H I L Sbjct: 61 YLIAELKKTVSNNNDANEISFVENGVLVVHLRMTGYFTFNNTLTNP------CKHTRIRL 114 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFH 161 +N N + + Y D R FG M V L L TLGPEP SFN YL Sbjct: 115 FDNNNNE---LRYIDVRSFGQMWWVRDGLSPNNIIKGLGTLGPEPFSESFNVNYLKKVIS 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K ++K+ LL+Q I+AGIGNIY E+L+ A +SP R+ R++ +N + +L + + Sbjct: 172 NKTRSIKSILLDQTIIAGIGNIYADESLYSAGISPFREARTINKNE------IKRLRRAV 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 VL +I AGG++ D+ ++G G F +VY +TG+ C C +I R +GRST Sbjct: 226 VDVLKKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKC-RQCKNLIERQKISGRST 284 Query: 282 FYCTYCQK 289 +C CQK Sbjct: 285 HWCRKCQK 292 >gi|283769053|ref|ZP_06341959.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] gi|283104410|gb|EFC05787.1| DNA-formamidopyrimidine glycosylase [Bulleidia extructa W1219] Length = 269 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + ++ + P F+ G++ SRR KYL Sbjct: 2 MPELPEVETVVRTLEQQISQCQIRSVRVYYDKI-VGDPKRFTDCLSGQRFRYFSRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+ N +++VHL M G F I+ +H HV L N + Y D R Sbjct: 61 LFQLDRN-TLVVHLRMEGKFYIQDPREPLN----RHIHVVFDLDNG-----MELRYMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ + LGPEP D F++ Y+ +K + LK+ LL+Q VAGI Sbjct: 111 KFGRMEVLPK--ELDLKNFHGLGPEPFDPIFDSEYVYAFLKRKKAPLKSVLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L + + P R L K L++ +Q++L ++I+ GG+++R Y Sbjct: 169 GNIYADEILAKIGIRPKMSARRLS------KKKCEALVEAVQEILANSIELGGTTIRSYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ V+ + C + I+ + AGRS++YC +CQK Sbjct: 223 SSLGVAGRFQTKCMVHL---QKICPKCQREIKMVRVAGRSSYYCPHCQK 268 >gi|120612253|ref|YP_971931.1| formamidopyrimidine-DNA glycosylase [Acidovorax citrulli AAC00-1] gi|120590717|gb|ABM34157.1| DNA-(apurinic or apyrimidinic site) lyase [Acidovorax citrulli AAC00-1] Length = 271 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + L K+LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIADAVAGAVIESVVLG-KSLRWPL-GRAPEDLHGLRVVAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ + +++HLGMSGS + ++ A H+H ++ + T + DPR Sbjct: 59 LLDLDRGM-LLIHLGMSGSLRFDRSADA----PGAHDHFLMATSRGT------LRLKDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + ++ L LG EP ++F +K LL + V G Sbjct: 108 RFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTARASSIGPLRA------RRLHEAIRAVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 222 AGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|169831563|ref|YP_001717545.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] gi|169638407|gb|ACA59913.1| formamidopyrimidine-DNA glycosylase [Candidatus Desulforudis audaxviator MP104C] Length = 276 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 134/289 (46%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I R+L + + V + + P F+ G+KI+ +SRR KY Sbjct: 1 MPELPEVETIVRDLGARLTGLMVERAEVLLPKVVAAPAPEEFARLIAGRKILGLSRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LIEL +I+HL M+G + P+H H+ + L + + D Sbjct: 61 ILIELSRGWVLILHLRMTGQLVYTTVLEP----FPKHTHLVLHLDQGV------LRFTDL 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG LV + P LR LG EP F + + +K LL+Q + G Sbjct: 111 RQFGRASLVPAREVRRVPGLRELGVEPLGAEFVKEDFIRKLARSRRMIKPLLLDQTFLTG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL RA + P R+ L L + I++VL + + G+S++ Y Sbjct: 171 LGNIYTDEALHRAGIHPERRAADLDTREAGT------LYRAIREVLAEGVAFRGTSVQHY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G G FQ VYGK G PC CG I RI GR T YC CQ Sbjct: 225 VDGSGQRGRFQEILRVYGKKGVPC-PVCGVPIERIRCGGRGTHYCPECQ 272 >gi|300933884|ref|ZP_07149140.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 297 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 94/313 (30%), Positives = 151/313 (48%), Gaps = 40/313 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE++RR L + + + H + +R P FS+ +I V RR KY Sbjct: 1 MPELPEVEVVRRGLESHILGRRFASVEVFHPRAVRGFDPVSFSSLLDATRIRSVDRRGKY 60 Query: 60 LLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L + +EG+ ++ VHLGMSG ++ + +H + + T+ + + Sbjct: 61 LWMVVEGDSGASEQALFVHLGMSGQMLVNR----ETQPVGKHERIRATFTDGSV-----L 111 Query: 115 IYNDPRRFGFMD---LVET---------SLKYQYPPLRTLGPEPADNSFNAIYLT----- 157 + D R FG LV + + + +P + +F Sbjct: 112 SFVDQRTFGRWAMMSLVPDPHGTVDAIGGPRLIPEAVAHVAMDPLETAFTEDDRHLDNTI 171 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + KNS +K LL+Q ++AGIGNIY EAL+ A + P R+ L + + ++ Sbjct: 172 TRIKAKNSEIKRVLLDQTVIAGIGNIYADEALFAAGIRPRRRASGLSRP------AIRRI 225 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 I + V++ A+D GG+S YV+++GS GYF + VYG+ G+PC CG I+R+ Sbjct: 226 IGHARAVMLRALDEGGTSFDSLYVNVNGSSGYFSRSLQVYGREGKPC-KVCGTPIKRVQF 284 Query: 277 AGRSTFYCTYCQK 289 GRS+ YC CQ+ Sbjct: 285 GGRSSHYCPVCQR 297 >gi|328954231|ref|YP_004371565.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] gi|328454555|gb|AEB10384.1| Formamidopyrimidine-DNA glycosylase [Desulfobacca acetoxidans DSM 11109] Length = 274 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+IRR L + + + L R+ LR A+ G ++RR KYL Sbjct: 1 MPELPEVEVIRRGLAKKLVGDKIIAVDLGRQRLRRQALDSELASLVGHTFSRLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ +++VHL M+G +++ SC P HV ++L T K ++Y D R Sbjct: 61 LLHLDQGQTLLVHLAMTGRLLLQTNSCPLP------PHVHLTLHCQTGHK---LLYQDMR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + P L +G EP +L + + +KN LL+ + +AGI Sbjct: 112 RFGQILLYPPG--KRPPALEQVGWEPFSRGLTPEWLRQKTVRLTRPVKNFLLDGRFIAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ A++ P + L++ I+++L AI AGG+++ +YV Sbjct: 170 GNIYASETLFEARVHPQTPVGRIDLK------TWETLLRAIRRILRRAIKAGGTTIVNYV 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G F VYG+ G PC C I R+V AGRSTF+C CQ Sbjct: 224 DCDGQSGLFGVQLKVYGRAGSPC-PVCQTPITRLVMAGRSTFFCPTCQ 270 >gi|329936741|ref|ZP_08286448.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329303971|gb|EGG47854.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 293 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 87/293 (29%), Positives = 150/293 (51%), Gaps = 19/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV + + H + +R +F+ G ++ +RR Sbjct: 1 MPELPEVEVVRRGLTRWVAHRTVAAVEVLHPRAVRRHLAGGENFAQRLTGHRLGAPARRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + +++ HLGMSG +++ +H + + + T+ + + Sbjct: 61 KYLWLPLEDTDEAVLAHLGMSGQLLVQPHEAP----TEKHLRIRVRFEDALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDEEAFHRALRRKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWR++L R T +L + T +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRSRLHYERPTATLTRPRTT------ELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ PC CG +RR RS+++C CQ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREDLPC-RRCGTPMRRRPWMNRSSYFCPKCQ 279 >gi|323359693|ref|YP_004226089.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276064|dbj|BAJ76209.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 296 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 89/306 (29%), Positives = 150/306 (49%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + + HF A G++I RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + + + +I+ HLGMSG ++ + +H + I L + + V++ Sbjct: 61 KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPE----ERHERIRIELEHPVHGP-LSVVFA 115 Query: 118 DPRRFG---FMDLVETSLKYQ----------YPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 D R FG LV+T + + +P D +F+ + + Sbjct: 116 DQRTFGSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRVGRTA 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q + +GIGNIY E+LW A++ P SL P + +L+ E+++V Sbjct: 176 SGIKRVLLDQTVASGIGNIYADESLWAARIHPEAVASSL------PTRAVNRLLGEVREV 229 Query: 225 LIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L A+ GG+S YV+++G GYF ++ + YG+TG+PC CG+ I R+ RS+ + Sbjct: 230 LDKALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGQPC-PRCGRPIVRVSFMNRSSHF 288 Query: 284 CTYCQK 289 C +CQ+ Sbjct: 289 CPHCQR 294 >gi|326318315|ref|YP_004235987.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375151|gb|ADX47420.1| formamidopyrimidine-DNA glycosylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 271 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + M + + L K+LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIADAMAGAVIESVVLG-KSLRWPLGCA-PEDLHGLRVVAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ + +++HLGMSGS + ++ + H+H ++ + T + DPR Sbjct: 59 LLDLDRGM-LLIHLGMSGSLRFDRSTES----PGAHDHFLMATSRGT------LRLKDPR 107 Query: 121 RFGFMDLVETSL-KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + ++ L LG EP ++F +K LL + V G Sbjct: 108 RFGAVVWADSETSPQAVKLLGRLGVEPLGDTFTLEGFVAALRASRLPVKQFLLGGRAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + S+ +L + I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTARASSIGPLRA------RRLHEAIRTVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ VYG+ G PC CG IR + Q RST+YC CQ+ Sbjct: 222 AGVDGNAGHFQLEAHVYGREGLPC-RTCGTPIRSMRQGQRSTYYCIRCQR 270 >gi|25028531|ref|NP_738585.1| formamidopyrimidine-DNA glycosylase [Corynebacterium efficiens YS-314] gi|259507586|ref|ZP_05750486.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|29611717|sp|Q8FP17|FPG_COREF RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|23493816|dbj|BAC18785.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259164765|gb|EEW49319.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 285 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 141/301 (46%), Gaps = 30/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ +H + R A G ++ +RR Sbjct: 1 MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L +EL+ L ++VHLGMSG +++ H L + Sbjct: 61 KFLWLELDDVAQQAPSGLGLLVHLGMSGQMLVKSPDATLN----PHLRARAELDDGNE-- 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 V + D R FG+ L L P + + + D++ + L KN+ +K Sbjct: 115 ---VWFVDQRTFGYWWL--GELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEIKR 169 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LLNQ+IV+GIGNIY E LW A + P +K + L L++ ++V+ A+ Sbjct: 170 LLLNQEIVSGIGNIYADEMLWEAGIHPRQKASRISLTR------LVALLEAGREVMTRAL 223 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D GG+S YV+++G+ GYF + + YG+ G+PC CG I R R + +C CQ Sbjct: 224 DQGGTSFDALYVNVNGASGYFSLSLNAYGQAGKPCA-RCGTPIARETFMNRGSHFCNRCQ 282 Query: 289 K 289 K Sbjct: 283 K 283 >gi|254423013|ref|ZP_05036731.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] gi|196190502|gb|EDX85466.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. PCC 7335] Length = 285 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 141/301 (46%), Gaps = 28/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L V N V ++ L R + F A +I RR K Sbjct: 1 MPELPEVETVRRGLNRVSLNQPVRGGEVRLARTIAYPELADAFLEAMSSVQITSWHRRGK 60 Query: 59 YLL--------IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 YLL +ELE + VHL M+G + P P H + L + + + Sbjct: 61 YLLATLCQRRRLELEPAGWLGVHLRMTGQLLWV------PKNEPMQTHCRVRLFFDGDNE 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + Y D R FG + V L+ LGPEP F+ YL + +K Sbjct: 115 ---LRYVDQRTFGRLWWVPPDRAIDSVMTGLQKLGPEPFSEEFSIDYLASALKGRQRPIK 171 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 NALL+Q++VAGIGNIY EAL+ + + P L + T KL Q I+ VL + Sbjct: 172 NALLDQRLVAGIGNIYADEALFLSGIRPTVVCDRLTRRKIT------KLHQAIRDVLTTS 225 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I++GG++ D+ + G+ G + VY + GEPC CG I RI AGRS YC CQ Sbjct: 226 IESGGTTFSDFRDVHGTNGNYGGVAWVYDREGEPC-RKCGVGILRIKLAGRSAHYCPKCQ 284 Query: 289 K 289 + Sbjct: 285 R 285 >gi|171920859|ref|ZP_02932023.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178962|ref|ZP_02964719.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024108|ref|ZP_02996848.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518256|ref|ZP_03003784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195867830|ref|ZP_03079830.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209554312|ref|YP_002284850.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550503|ref|ZP_03771452.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551254|ref|ZP_03772200.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903064|gb|EDT49353.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209239|gb|EDU06282.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019158|gb|EDU57198.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998107|gb|EDU67204.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660527|gb|EDX53784.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209541813|gb|ACI60042.1| formamidopyrimidine-DNA glycosylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379069|gb|EEH01434.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379657|gb|EEH02019.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 277 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ I L + + N+ + + +H K L+ P F KI ++ R KY Sbjct: 1 MPELPEVQTIVDYLNLNVLNLLIKKVIVHLPKILKNKTPAEFENLLVNHKITNIKRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL L+ NL + VHL M G F + N H H+ I N ++ YND Sbjct: 61 LLFFLDNNLVLSVHLRMEGKFYYQPKD---EWFNLAHTHIIIEFENG-----MQLRYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + E L+ + +P D +F YL + K N +K ALL+Q V+G Sbjct: 113 RQFGTFHIYEQESFLDSKELKKIALDPLDANFTPQYLYEKLKKSNKAIKTALLDQSNVSG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ K+ P + L + + +E +++L+ +I G+++ Y Sbjct: 173 IGNIYADEILFATKIFPTTLAKDLTIKD------YENIAKEAKRILLLSIQNKGTTIHTY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G FQ V+ +PC + CG +I++ GR T+YC+ CQ Sbjct: 227 KFGNDETGMFQKMLLVHTHAKKPCQT-CGTIIQKTKVNGRGTYYCSNCQ 274 >gi|296270739|ref|YP_003653371.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] gi|296093526|gb|ADG89478.1| formamidopyrimidine-DNA glycosylase [Thermobispora bispora DSM 43833] Length = 294 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 28/301 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+IRR L + + + A +G+ ++ RR KYL Sbjct: 1 MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRRNTGDLPARLKGRPLLSAERRGKYL 60 Query: 61 LIELEGNL---------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L +++VHLGMSG ++ +H V + ++ Sbjct: 61 WLPLGDGDPADPREAEEALVVHLGMSGQLLLTDRGAPA----ERHLRVRLGFADD----G 112 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + D R FG M + + Y P+ + P+P + +F+ H+ ++ + LK Sbjct: 113 PELRFVDQRTFGHMLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFAHRLTRRRTGLK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q +++G+GNIY EALWRA+L R T +L T +L+ +++ VL DA Sbjct: 173 RALLDQSLISGVGNIYADEALWRARLHWARATETLTAAEVT------ELLAQVRAVLTDA 226 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 I GG+S YV+++G GYF + +VYG+ EPC CG +RR RS++ C C Sbjct: 227 IAQGGTSFDSLYVNVNGESGYFGRSLAVYGRQDEPC-PRCGAPVRRDPFMNRSSYSCPKC 285 Query: 288 Q 288 Q Sbjct: 286 Q 286 >gi|269127638|ref|YP_003301008.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] gi|268312596|gb|ACY98970.1| formamidopyrimidine-DNA glycosylase [Thermomonospora curvata DSM 43183] Length = 297 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 31/304 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV + H + +R F+A G I RR Sbjct: 1 MPELPEVEVVRRGLERWVSGRTVAAAEVLHPRAVRRHVGGAADFTARLIGNTIGAARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L EG +I+ HLGMSG ++ + A+ +H V ++ T+ ++ + + Sbjct: 61 KYLWLPLAEGGGAIVAHLGMSGQLLVGDPARARQ----RHLRVRLTFTDGSH----DLRF 112 Query: 117 NDPRRFGF---MDLVETSLKYQYPPLR--------TLGPEPADNSFNAIYLTHQFHKKNS 165 D R FG +LV + + P+P + +F+ ++ + Sbjct: 113 VDQRTFGHLMVAELVPDAFGRAGKEAEAAVPAPVAHIAPDPLEPAFDDEAFYRALRRRRT 172 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K ALL+Q +++G+GNIY EALWRA+L R T +L + + ++++ +++V+ Sbjct: 173 GIKRALLDQSLISGVGNIYADEALWRARLHWARATENLTRAE------VSRVLEGVREVM 226 Query: 226 IDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ AGG+S R YV+++G GYF+ + YG+ GEPC + CG IRR V RS++ C Sbjct: 227 TAALAAGGTSFDRLYVNVNGESGYFERSLEAYGRRGEPC-TRCGTPIRRDVFMNRSSYSC 285 Query: 285 TYCQ 288 CQ Sbjct: 286 PKCQ 289 >gi|197118515|ref|YP_002138942.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197087875|gb|ACH39146.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 269 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 132/288 (45%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + LR P G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAIRSAKLRTMVPQELPRLLVGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + + H+H + L + ND R Sbjct: 61 IITCRQG-SLLLHLGMTGHLRLVPAGAGAGV----HDHFDLELE-----SSLILRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ L+ +GPEP + YL + K + L+ L++ +VAG+ Sbjct: 111 RFGSIH-FTSGDPLKHKLLQGIGPEPLTDELTGPYLYRKSRGKKAPLQRFLMDSSVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P SL + + +L I+K L +I+AG + D+ Sbjct: 170 GNIYAAETLFRCGMLPPTPAGSLSEAD------CDRLCDCIKKTLAASIEAGR--VMDFS 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTFYC CQ Sbjct: 222 VREEKLVYFPQQLFVYGREGLAC-RQCGSAIERGRLGNRSTFYCPRCQ 268 >gi|332701734|ref|ZP_08421822.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] gi|332551883|gb|EGJ48927.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio africanus str. Walvis Bay] Length = 299 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 149/317 (47%), Gaps = 46/317 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-----------RFDFPH---HFSAATR 46 MPELPEVE I R L ++ + ++ + + P F+ R Sbjct: 1 MPELPEVETIARGLAPDVQGRLIAEVEVRYSGAVCQSAGPGTTRKTTAPEKGRAFADLVR 60 Query: 47 GKKIIDVSRRAKYLLIELE--------------GNLSIIVHLGMSGSFIIEHTSCAKPIK 92 G+++ V RRAK L+ +L +L ++ HL M+GS + S A+P Sbjct: 61 GRRVDKVWRRAKLLVFDLGPKNAAESGADKVSPADLHLVFHLKMTGS-VWLPPSGAQPD- 118 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 H H+ +L N T +V + D R+FG+ + P LGPEP + Sbjct: 119 --AHTHIVFTLDNGT-----KVHFRDIRKFGWCLALTGEELRSMPFFAALGPEPLEIG-- 169 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 F + + +K LL+Q+I+AGIGNIY E+L+R+ + P K + P+ Sbjct: 170 EKDFVALFKGRKAGMKALLLDQEIIAGIGNIYADESLFRSGIHPRTKAADV------PEA 223 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L +E+Q VL AI GS+ DY G G FQN F VYG+ GE C+ CG ++ Sbjct: 224 KLRTLHRELQAVLRQAIAENGSTFSDYRTAQGDAGAFQNRFLVYGRAGEKCVK-CGGTLQ 282 Query: 273 RIVQAGRSTFYCTYCQK 289 V AGR++ +C CQK Sbjct: 283 SEVVAGRTSVFCPKCQK 299 >gi|218506631|ref|ZP_03504509.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli Brasil 5] Length = 246 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 115/247 (46%), Positives = 154/247 (62%), Gaps = 10/247 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ V + L R++LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPAMEGARVARLELRRQDLRFPFPEALADRVSGRTIVGLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ +++ HLGMSGSF IE + + K+ +H+HV L + Sbjct: 61 LVDLDDGNTLVSHLGMSGSFRIEGGAASAMPGQFHHARTKDEKHDHVVFHLEGQGGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVVYNDPRRFGFMDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +QK +AG+GNIYVCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AG Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAG 238 Query: 233 GSSLRDY 239 GSSLRD+ Sbjct: 239 GSSLRDH 245 >gi|289643137|ref|ZP_06475266.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] gi|289507029|gb|EFD27999.1| formamidopyrimidine-DNA glycosylase [Frankia symbiont of Datisca glomerata] Length = 284 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAA--TRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + H + +R A G+ I RR Sbjct: 1 MPELPEVEVVRRGLERTLPGRTIATVAVAHPRAVRRHAAGAADFAAVLTGRTIEAACRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG ++ T + P H+ + T + ++ R + Sbjct: 61 KYLWLALDSGAALLGHLGMSGQLLVVAT------EKPDETHLRVRFTFSDAGRELR--FV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + +V P+ + +P D F+ ++ + +K ALL+Q +V Sbjct: 113 DQRTFGGLAVVPADAGV-PAPIAHIARDPLDPGFSDAGFVAAVRRRRTGIKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY E+LWRA L R T +L + L +L+Q +++VL++A+ AGG+S Sbjct: 172 SGIGNIYADESLWRAGLHYARPTGTLTRGE------LNRLLQSVREVLLEALHAGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV ++G G F + +VYG+ G PC + C IRR RS+F C CQ Sbjct: 226 ALYVSVNGESGLFDRSLAVYGRAGLPC-TRCETPIRRDAFMNRSSFTCPRCQ 276 >gi|295696994|ref|YP_003590232.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] gi|295412596|gb|ADG07088.1| formamidopyrimidine-DNA glycosylase [Bacillus tusciae DSM 2912] Length = 300 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 146/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPE PEVE IRR L V++ + + + + +R P F+A G+ ++ RR K Sbjct: 1 MPEWPEVEQIRRELA-VLEGSRIAGVTVLCERTIRTPADPEEFAARLAGETWQEIGRRGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YLL ++I HL M G + + ++ V L + + + Y D Sbjct: 60 YLLFH-GLRWTLISHLRMEGRYRLVEAKTPVD----EYTRVIFHLEDGKDLR-----YRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG MD VE +PP+ +LGPEP D L + K +K LLNQ+++A Sbjct: 110 VRKFGTMDAVERRQWEVFPPIASLGPEPFDPQLTPEVLRRRLSGKGR-IKGLLLNQRVIA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+R + P R RSL +L+ +++ +L +A+ AGG+++R Sbjct: 169 GLGNIYVDEVLFRTGIHPERPGRSLTPAEA------ERLLAQMRALLQEALVAGGATVRS 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV DG G Q VYG+TG+PC CG I R V AGR T C CQ Sbjct: 223 YVRSDGRPGLMQEHLFVYGRTGQPC-RVCGHSIERRVVAGRGTHICPVCQ 271 >gi|320527461|ref|ZP_08028642.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] gi|320132174|gb|EFW24723.1| formamidopyrimidine-DNA glycosylase [Solobacterium moorei F0204] Length = 268 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + D+ + + + F + + RR KYL Sbjct: 1 MPELPEVETVLRTLEHQIQGRKILDVDVRYSKMIENDIEQFKQQLKNQTFNTFMRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ + ++ HL M G + I+ + +H HV L N + Y D R Sbjct: 61 LFGLD-DCILMSHLRMEGRYYIQDPTEPTN----RHMHVIFHLDNGKELR-----YMDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M+++ + + LGPEP D +FNA Y+ K + LK+ LL+Q VAGI Sbjct: 111 KFGRMEILPLDTDFSHY--HGLGPEPFDEAFNASYIHAYRKGKRTPLKSLLLDQSFVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L L P R + + + L+ +++L AI AGG+++R Y Sbjct: 169 GNIYADEILAACNLRPGRSCARITRKDE------ENLVMHTRRILKAAIAAGGTTIRTYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G FQ +V+ + C I GRS++YC +CQK Sbjct: 223 SSLGVTGRFQTECTVHM---QKICPRCKGQIHVKYIGGRSSYYCPHCQK 268 >gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 295 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 144/305 (47%), Gaps = 29/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+++L+ + ++ + ++ L+ P F + +I DV RR KY Sbjct: 1 MPELPEVETIKKSLLSDLTGDRISRVEIYFPGMLQNMSPEDFKESVISNQIKDVKRRGKY 60 Query: 60 LLIELEGNL-------SIIVHLGMSGSFIIE---------HTSCAKPIKNPQHNHVTISL 103 LLI + N II+HL M+G I++ H + I+ +H L Sbjct: 61 LLIYVSCNGKMKDQVKVIIIHLRMTGRLILKNNEVEKSHNHLDDEEIIQEYRHLRCLFQL 120 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 + + ++D R+FG M LV ++ + L LGPEP F+ K Sbjct: 121 QSGITLE-----FHDQRKFGTMALVNQGEEFYWKGLANLGPEPLSEEFDYEDFYKGVKKS 175 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+QK+VAGIGNIY E L+ + + P RK L + L + I + Sbjct: 176 KKPIKGILLDQKLVAGIGNIYADEVLFASGIHPARKGEELTEQEVGS------LYKTIIQ 229 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L I G++ DY +G+ G FQ+ V+ + E CL C + +++ A R T+Y Sbjct: 230 ILELGIKYRGTTFSDYRDSEGNKGNFQDLLKVFNRNKEECL-ICRREVQKTKVANRGTYY 288 Query: 284 CTYCQ 288 C CQ Sbjct: 289 CPNCQ 293 >gi|213964684|ref|ZP_03392884.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] gi|213952877|gb|EEB64259.1| formamidopyrimidine-DNA glycosylase [Corynebacterium amycolatum SK46] Length = 287 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 16/296 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + + D ++ P F TRG+ ++ RR Sbjct: 1 MPELPEVESVRRGLDTYVVGGRIDDSFVYNARAVRRQPGGAAEFIGRTRGRTVVASDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K++ + L+ + +I +HLGMSG +E + +H + ++ + +N Sbjct: 61 KFMWLTLDDDSAIAIHLGMSGQLRVEAPYTPNTLSG-RHTRAAFDIALPDG-ARHLINFN 118 Query: 118 DPRRFGF---MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG+ +LVE+ ++ P + P+ + + + + L H+ K S +K LLNQ Sbjct: 119 DQRTFGWVWACELVESHGRFVPEPAAKIAPDLLEPTVDVVALAHRMMKSRSPIKAVLLNQ 178 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 IV+GIGNIY E LW AK+ L L KL++E Q VL A+ AGG+ Sbjct: 179 NIVSGIGNIYADEMLWAAKVDGRVPACDLSVRR------LAKLLREGQSVLERALAAGGT 232 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YVH++G GYF+ + + YG+ GEPC CG+ I R+ RS++ C CQ+ Sbjct: 233 SFDALYVHVNGESGYFERSLNAYGQEGEPC-PRCGRAIVRLPFGNRSSYLCPTCQR 287 >gi|319948354|ref|ZP_08022498.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] gi|319437985|gb|EFV92961.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Dietzia cinnamea P4] Length = 303 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 31/303 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + + A G+ + RR Sbjct: 1 MPELPEVEVVRRGLADHVVGRTLVSVEVTGARTARRQPGGAAEIVARLTGRTVSGARRRG 60 Query: 58 KYLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + L+G+ + ++VHLGMSG ++ +H H L + + Sbjct: 61 KYLWLTLDGDDAAGADCLLVHLGMSGQMLVTGAGAP----PVRHLHARAVLDDGNELR-- 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQ------YPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + D R FG +V + P + +P ++ ++ + ++++ Sbjct: 115 ---FVDQRTFGGWTVVPLAGARDGSGVLLPAPAAHIAADPFESGYDPVAAARVIRRRDTE 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q +V+GIGNIY EALWR+ L R++ ++ + ++++ + V+ Sbjct: 172 IKRLLLDQTVVSGIGNIYADEALWRSGLHGRRRSGAITLR------AVTRVLEHARDVMA 225 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DA+DAGG+S YV+++G+ GYF + VYG+ G PC S CG + R R + +C Sbjct: 226 DALDAGGTSFDALYVNVNGASGYFDRSLDVYGRAGLPC-SRCGTAVVREDFMNRGSHFCP 284 Query: 286 YCQ 288 CQ Sbjct: 285 VCQ 287 >gi|328950379|ref|YP_004367714.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] gi|328450703|gb|AEB11604.1| Formamidopyrimidine-DNA glycosylase [Marinithermus hydrothermalis DSM 14884] Length = 264 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 144/290 (49%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R+ L ++ + I H R+ G+++ + RR K+L Sbjct: 1 MPELPEVETTRQALRPYLEGRAIRAIH-HTDPARYRRTEDA----VGRRVEVLRRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LEG L ++VHLGM+G F HV + L + +NDPR Sbjct: 56 IAALEGGLELVVHLGMTGGFRFAEGP-----------HVRVRLE----VPDRPLYFNDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG +V + P L LGPEP ++F + +K LL Q++VAG+ Sbjct: 101 RFGRWWVVPAGAYREIPLLDRLGPEPLSDAFTLEGFREGLARTARGVKAVLLAQEVVAGL 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EALWRA + P R +L + +L I++VL +A+ AGGS+L+D Sbjct: 161 GNIYADEALWRAGVHPARPANTL------EVGAIARLYTAIREVLAEAVAAGGSTLQDGT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG++G FQ VYG+ G PC+ CG I + V AGR T +C CQ Sbjct: 215 YRRPDGALGRFQVQHKVYGRPGAPCV-RCGTPILKAVVAGRGTHFCPRCQ 263 >gi|29829206|ref|NP_823840.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|39931257|sp|Q82JU0|FPG_STRAW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|29606312|dbj|BAC70375.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 153/294 (52%), Gaps = 19/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + TV D+ + H + +R F+ +G+++ SRR Sbjct: 1 MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHTAGGEDFAHRLKGRRVGVPSRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE + +++ HLGMSG +++ CA + +H + + + T+ + + Sbjct: 61 KYLWLPLETTDTAVLAHLGMSGQLLVQPHDCA----DERHLRIRVRFADALGTE---LRF 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R FG + L +T+ + + +P D F+ +K + +K ALL+Q + Sbjct: 114 VDQRTFGGLSLHDTTPDGLPDVIAHIARDPLDPLFDDAAFHEALRRKRTTVKRALLDQSL 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 ++G+GNIY EALWRA++ R T + +L+ ++ V+ A+ GG+S Sbjct: 174 ISGVGNIYADEALWRARIHYERPTAGFTRPRT------AELLGHVRDVMNAALAVGGTSF 227 Query: 237 RD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF + YG+ G PC C +RR RS+++C CQ+ Sbjct: 228 DSLYVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSYFCPKCQR 280 >gi|111023482|ref|YP_706454.1| formamidopyrimidine-DNA glycosylase [Rhodococcus jostii RHA1] gi|123045457|sp|Q0S2E0|FPG_RHOSR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110823012|gb|ABG98296.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 292 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + ++ + LH + +R P + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIASADRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++++VHLGMSG +++ + +H + L + + + Sbjct: 61 KYLWLVLEPSTVALVVHLGMSGQMLVQPPE----LPTEKHLRIRARLDSG-----LDLRF 111 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG L V+ + + +P D F+ K++ +K ALL+ Sbjct: 112 VDQRTFGGWALAPLVDVDGSLVPDSVAHIARDPLDPRFDLAATVKVVRGKHTEVKRALLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA++ R T L + +++ Q+V+ +A+ GG Sbjct: 172 QTVVSGIGNIYADEALWRARIHGNRLTDRLSGP------KVREVLTAAQEVMREALTQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQ 280 >gi|315125571|ref|YP_004067574.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] gi|315014084|gb|ADT67422.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas sp. SM9913] Length = 258 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 89/277 (32%), Positives = 135/277 (48%), Gaps = 20/277 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + N VT + +H ++R+ P G + + RRAKYLL+E E +I+ Sbjct: 2 GITPHVLNQVVTKVNIHNASMRWPVPDEVYQ-LEGLVVSSIERRAKYLLLECELGAAIL- 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSG+ + + + +H+HV L NN + NDPRRFG + Sbjct: 60 HLGMSGNLRVVNANEPLK----KHDHVEFILANNK-----ALRLNDPRRFGCCLWQAPNE 110 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + + L LGPEP + F A + Q K +K ++N +V G+GNIY E+L++A Sbjct: 111 E--HKLLAKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMNNAVVVGVGNIYANESLFKA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P ++ + LI I+ L AI GG++L+D+ DG GYF Sbjct: 169 GIDPRKEAGKVSLKR------YQALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQ 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC+ NC + I RST +C CQK Sbjct: 223 LLVYGRKGQPCV-NCDTALTEIRLGQRSTVFCEVCQK 258 >gi|58698441|ref|ZP_00373350.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] gi|58535033|gb|EAL59123.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Drosophila ananassae] Length = 265 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 103/282 (36%), Positives = 161/282 (57%), Gaps = 18/282 (6%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 +E+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY + +G Sbjct: 1 MEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYTIWNTDG 60 Query: 67 NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 ++++I+HLGMSG I A+ +H+HV ++NT+ +I+NDPRRFG + Sbjct: 61 SMAVIIHLGMSGKLIYAEHDQAQN----KHDHVVFLFSDNTS-----IIFNDPRRFGLVI 111 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 ++ + + G EP + F+ YL K +N+K+AL++ K++ G+GNIY Sbjct: 112 VLNKEQEINF--FDDFGIEPLTDEFSGDYLQELLKNKKANIKSALMDNKLIVGVGNIYAS 169 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E+L+RA++SP+R ++L KL EI+ L DAI AGGS+L+DY GS Sbjct: 170 ESLFRARISPLRPAKNLTYRE------YEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSA 223 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GYFQN F VYGK +PC C +I I Q GRST++C CQ Sbjct: 224 GYFQNNFYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 264 >gi|320449520|ref|YP_004201616.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] gi|320149689|gb|ADW21067.1| formamidopyrimidine-DNA glycosylase [Thermus scotoductus SA-01] Length = 265 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 139/290 (47%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ + + + + G+++ + RR K+L Sbjct: 1 MPELPEVETTRRKLLPLFVGKRLLQLEHRDPRRYRH-----TERAEGQRVEGIRRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L ++VHLGM+G F +E + H V L + + ++DPR Sbjct: 56 LFALTEGWEMVVHLGMTGGFRLERSP---------HTRVAFQLEDR------EIFFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +V + P L LGPEP F LK LL Q++ AG+ Sbjct: 101 RFGRIWVVRKGDYQKIPLLLQLGPEPLSEDFRFHEFWLGLKGSQKPLKALLLEQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL--RD 238 GNIY EAL+RA+LSP R+ R L + +L ++KVL +A+ GGS+L R Sbjct: 161 GNIYADEALFRARLSPFRRGRELTEAEAQ------RLFAALKKVLAEALLLGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+TG PC CG I + V AGR T +C CQ Sbjct: 215 YQQPDGLPGSFQMRHAVYGRTGLPC-PVCGTPIAKRVVAGRGTHFCPRCQ 263 >gi|311898537|dbj|BAJ30945.1| putative formamidopyrimidine-DNA glycosylase/AP lyase [Kitasatospora setae KM-6054] Length = 285 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 139/296 (46%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + + FSA RG+ + + RR Sbjct: 1 MPELPEVEVVRRGLARWAAGRTVAEARVLHPRAVRRQAGGADEFSALLRGRTLGEPQRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L LS+I HLGMSG +++ A + H + T+ + + Sbjct: 61 KYLWVPLGDGLSMIGHLGMSGQLLVQEPEMA----DSPHLRARLRFTDGGT----ELRFV 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + + + L + +P D F+ K + +K ALL+Q Sbjct: 113 DQRTFGGLAVEEAEDGDPEATPRSLAHIARDPLDARFDDDAFARALRAKRTTVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+G+GNIY EALWR++L R T +L + +L+ + V+ A+ GG+ Sbjct: 173 TLVSGVGNIYADEALWRSRLHFDRPTATLTRPAAL------ELLGHARDVMTAALAVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G GYF YG+ GEPC CG +RR RS++ C CQ+ Sbjct: 227 SFDSMYVNVNGESGYFSRDLDAYGREGEPC-RRCGTPMRRDAWMNRSSYSCPKCQR 281 >gi|305680813|ref|ZP_07403620.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] gi|305659018|gb|EFM48518.1| DNA-formamidopyrimidine glycosylase [Corynebacterium matruchotii ATCC 14266] Length = 312 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 92/320 (28%), Positives = 142/320 (44%), Gaps = 44/320 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+TD+ +H F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTITDVAVHHPRAIRHVLGGEGEFRSEILGRTIIGLGRRG 60 Query: 58 KYLLIELE-------------------------GNLSIIVHLGMSGSFIIEHTSCAKPIK 92 K+L + L G+ ++VHLGMSG +I+ ++ Sbjct: 61 KFLWLNLADPAAATASASSVPTSQPTPQATPQAGDQVVVVHLGMSGQMLIKDSNANSDDP 120 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADN 149 +H + + ++T ++ + D R FG+ LV+ L + + D Sbjct: 121 KFKHCRIQVRFDDDT-----QLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 ELKLSEVAATMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPA--- 232 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG Sbjct: 233 ---ALKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPCD-RCG 288 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 ++ + RS+ YC +CQ Sbjct: 289 TILVKEKFTNRSSHYCPHCQ 308 >gi|262200032|ref|YP_003271241.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] gi|262083379|gb|ACY19348.1| formamidopyrimidine-DNA glycosylase [Haliangium ochraceum DSM 14365] Length = 282 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 146/294 (49%), Gaps = 18/294 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATR-GKKIIDVSRRA 57 MPELPEVE +RR L V+ V + LR P G+ + D+ R Sbjct: 1 MPELPEVETVRRTLAPVL-GQRVEAMWTSGLPLRLNRPVPEELLREISLGRTVEDIRRWG 59 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYLL++L G S++VHLGMSG + + + P H HV L+ + R Y Sbjct: 60 KYLLLDLAGAGHSVLVHLGMSGRLRMMAAAGER----PPHTHVAWLLSGGAPPAELR--Y 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 +DPRRFG +D+VE + +P L LG +P + L + ++K LL+Q Sbjct: 114 SDPRRFGVIDVVERGNERAHPSLARLGEDPLTGALTGALLHAGSRRVRRSIKTFLLDQHT 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GNIY EALW+A++ P L + I +V A++ GG+SL Sbjct: 174 VAGVGNIYASEALWQARILPTMPAERLSKARADALAA------AIHEVFARALEHGGTSL 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTYCQK 289 RD+V+ DG G + VY + GEPC C +IRR V RSTF+C CQ+ Sbjct: 228 RDFVNADGHAGEHAHYLWVYERDGEPCPRPTCPGIIRRTVLQARSTFHCPRCQR 281 >gi|227494680|ref|ZP_03924996.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] gi|226831862|gb|EEH64245.1| formamidopyrimidine-DNA glycosylase [Actinomyces coleocanis DSM 15436] Length = 299 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 139/306 (45%), Gaps = 32/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE IR L + + ++ + + P F G KI RR Sbjct: 1 MPELPEVETIRLGLAGRVVGKEIAEVSVWNTRMVRTQPGGAQEFIYLLEGAKIQAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L +EL+ ++++HLGMSG H KP + +H H+ + T+ T + Sbjct: 61 KFLWLELDDAKALVIHLGMSGQV---HAWDEKPAERRKHEHIRVEFTDGTGY-----THV 112 Query: 118 DPRRFGFMDLVETSLKYQYPP-------------LRTLGPEPADNSFNAIYLTHQFHKKN 164 D R FG ++V+ P + +P D FN + + Q + Sbjct: 113 DQRTFGKAEVVDLVPCADGFPGGRGSKMPMMPASATHIARDPLDLGFNVVTVARQLRRSA 172 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL Q++V+GIGNIY EAL+ L SL Q L++ Q+V Sbjct: 173 VAVKTLLLKQELVSGIGNIYADEALFACGLHGSVPGSSLTQKQAV------ALLEAAQQV 226 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + A++ GG+S YV++ G GYF + VYG+ G+ C CG +I R GRS Y Sbjct: 227 MRAAVEVGGTSFDSLYVNVSGEPGYFAISLQVYGRNGQAC-HKCGNLILRENIGGRSHHY 285 Query: 284 CTYCQK 289 C CQ+ Sbjct: 286 CGTCQR 291 >gi|169630336|ref|YP_001703985.1| formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus ATCC 19977] gi|238688908|sp|B1MDL2|FPG_MYCA9 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169242303|emb|CAM63331.1| Formamidopyrimidine-DNA glycosylase (MutM) [Mycobacterium abscessus] Length = 286 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + H + +R + G++I RR Sbjct: 1 MPELPEVEVVRRGLHHHLVGKTIASTLVYHERAVRRQSGGAVELAGLLAGQQISGTGRRG 60 Query: 58 KYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL + LEG+ +++VHLGMSG +I PI PQH + +L + + + Sbjct: 61 KYLWLTLEGSSGAQALVVHLGMSGQMLIG------PISRPQHLRIAATLDDGSV-----L 109 Query: 115 IYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + D R FG DLV P+ + +P D F + + K++ +K AL Sbjct: 110 SFVDQRTFGGWMVTDLVTVDGSELPEPVAHIARDPLDELFEIGAVVTRLRGKHTEIKRAL 169 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+G+GNIY EALW+A++ R T +G + L +++ V+ A+ Sbjct: 170 LDQTVVSGVGNIYADEALWQARVHGRRLT------DGMSRAKLTEVLDSAAAVMRLALAQ 223 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG+S D YV+++G GYF + YG+ GEPC CG+ +RR RS+++C CQ+ Sbjct: 224 GGTSFDDLYVNVNGESGYFDRSLEAYGREGEPC-RRCGRAMRREAFMNRSSYFCPSCQR 281 >gi|56416891|ref|YP_153965.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] gi|56388123|gb|AAV86710.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. St. Maries] Length = 269 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 3 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 62 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +P +H+HV + L + V++NDPR Sbjct: 63 VFVLSRGERVMFHLGMSGRM-----AHVRPYVREKHDHVALLLDGG-----FHVVFNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 113 RFGAVLLVNFQAYENIA--SRIGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 168 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC CG I + GRSTF+C CQ+ Sbjct: 222 IPTGAAGGFQQHFMVYQRAGQPCN-VCGARILSERRGGRSTFFCALCQR 269 >gi|71083113|ref|YP_265832.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] gi|71062226|gb|AAZ21229.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1062] Length = 287 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 112/300 (37%), Positives = 157/300 (52%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC----------AKPIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ + + P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNISKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELE-KRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L + + K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQD------CKKIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|91762461|ref|ZP_01264426.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] gi|91718263|gb|EAS84913.1| Formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter ubique HTCC1002] Length = 287 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 112/300 (37%), Positives = 157/300 (52%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI++++L +++ + I + +NLRF P F + K I V+R +KYL Sbjct: 1 MPELPEVEIVKQSLSKKLEHKKIKKIIITNRNLRFKIPLKFEELLKNKIIKKVTRFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC----------AKPIKNPQHNHVTISLTNNTNTK 110 ++ ++HLGMSG+ + + P +HNHV I K Sbjct: 61 ILNFSDQSFCLIHLGMSGTVHLIKKNNINKFTNTSFYNSPSLPKKHNHVEIHF------K 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 RVIYNDPRRFGF +E + + LGPEP +FN YL F K ++K+ Sbjct: 115 GLRVIYNDPRRFGFFKFIENKKELE-KRFSHLGPEPFFKNFNLEYLIGYFTNKKKDIKSF 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK V+GIGNIY E L+ K++PI L + + K+I + VL AI Sbjct: 174 LLDQKFVSGIGNIYASEILFLCKINPITYASKLTKQD------CKKIITYSKSVLNRAIK 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ +I G G FQ F VY + CL C I++I + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNITGKSGNFQKEFRVYQRENLSCLRTKCNGKIQKIFISNRSTFFCNTCQK 287 >gi|290953522|ref|ZP_06558143.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] gi|295313214|ref|ZP_06803873.1| formamidopyrimidine-DNA glycosylase [Francisella tularensis subsp. holarctica URFT1] Length = 270 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 87/283 (30%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L+ + + + DI ++ LR+ + K + ++ RR K+L Sbjct: 1 MPELPEVETVKRGLIKTIIDKKIFDIEINTDKLRYPIDKDQLVKIKNKVVKEIQRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I ++ +L +I+HLGMSG + ++ I +H+H+ ++L++N ++YNDPR Sbjct: 61 IIFIKDDLQLIIHLGMSGIIKVIDSTNYNKI---KHDHIVVTLSDN-----LSLVYNDPR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ + ++ L + G EP FN+ YL + + + +K +++ IV G+ Sbjct: 113 KFGYWLVNTNHTPLEHRVLVSHGVEPLTADFNSDYLVSKLKQTSRKIKQTIMDNNIVVGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ + + P R + ++ + L+ I+K+L AI GG++L+DY Sbjct: 173 GNIYASEALFDSNILPTRASNTITKKEA------ANLVSSIKKILEKAITQGGTTLKDYK 226 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +G GYF +VYG+ + C C I+ +V A R+TF+ Sbjct: 227 NTEGKPGYFTQQLNVYGRNEQQCY-VCNTKIQSLVIAQRNTFF 268 >gi|114567528|ref|YP_754682.1| DNA-formamidopyrimidine glycosylase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317553|sp|Q0AVE3|FPG_SYNWW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|114338463|gb|ABI69311.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 268 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ NL ++ + + ++ + R+++ + G+ I + SRR KYL Sbjct: 1 MPELPEVETIKNNLQEILP-LRIKELEIRREDILRCRDYALEE-LTGQIIEEASRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ ++ L ++ HLGMSG I+ H HV I L K+ +++Y D R Sbjct: 59 ILAVDNGLFLVFHLGMSGRLYIQEEETTVLEP---HVHVIIHLD-----KRLKLLYQDAR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L++ + LG EP F YL + + +KN LLNQ +++GI Sbjct: 111 RFGGLWLLKDTQC----FFSRLGKEPLSEEFCPRYLEQVLQGRQTAIKNLLLNQNLISGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ SL + L I++VL +I G++ RDY Sbjct: 167 GNIYADEALFMAGIRPDRQAASLSVRE------IEGLCCGIKEVLAKSIKYRGTTFRDYR 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN VYG+ + C NCGQ ++R GRS+ YC CQ+ Sbjct: 221 DGKRQPGEFQNHLQVYGRFNQAC-PNCGQPLKRSRIGGRSSHYCEKCQQ 268 >gi|47779378|gb|AAT38607.1| predicted formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium eBACHOT4E07] Length = 269 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 154/288 (53%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + +N + +I +H +LR+ + S ++ K I ++SRRAKY+ Sbjct: 1 MPELPEVETTVRAISKF-QNKILKEIIVHNAHLRWKVDKNISQLSKNKLIKEISRRAKYI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + S+++HLGMSG I++ +H+H+ + K ++++ND R Sbjct: 60 LIHF-NDSSLMIHLGMSGKLRIQNIGNNFFK---KHDHIELIFD------KEKIVFNDTR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + + LG EP FN YL KN ++K +++QK+V G+ Sbjct: 110 RFGSIHF--TKSFKNHRLIENLGVEPLSREFNKDYLFEICRIKNISIKKLIMDQKVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P R ++ + +L I++VL AI GG++L+D+ Sbjct: 168 GNIYASESLFLAKIKPNRLSKKISLKE------CDQLTNAIKRVLRYAIRKGGTTLKDFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS GYF +VY + E C NC I+++ R++F+C CQ Sbjct: 222 SADGSEGYFNLNLNVYDREDENC-KNCKSKIKKVTIGQRASFFCDSCQ 268 >gi|254995076|ref|ZP_05277266.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Mississippi] gi|255003241|ref|ZP_05278205.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Puerto Rico] gi|255004368|ref|ZP_05279169.1| formamidopyrimidine-DNA glycosylase [Anaplasma marginale str. Virginia] Length = 267 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 147/289 (50%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 1 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +P +H+HV + L + V++NDPR Sbjct: 61 VFVLSRGERVMFHLGMSGRM-----AHVRPYVREKHDHVALLLDGG-----FHVVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 111 RFGAVLLVNFQAYENIA--SRIGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 166 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G FQ F VY + G+PC CG I + GRSTF+C CQ+ Sbjct: 220 IPTGAAGGFQQHFMVYQRAGQPCN-VCGARILSERRGGRSTFFCALCQR 267 >gi|93117331|gb|ABE99583.1| fpg [Neisseria meningitidis] Length = 247 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 14/261 (5%) Query: 9 IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL 68 R + ++ TV + L + LR+ G++++ RRAKYL++ + Sbjct: 1 TTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTG- 59 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 +++HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + Sbjct: 60 ILLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWY 114 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 E ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+ Sbjct: 115 E-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANES 173 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+RA +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GY Sbjct: 174 LFRAGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGY 227 Query: 249 FQNAFSVYGKTGEPCLSNCGQ 269 FQ ++VYG+ +PC CG Sbjct: 228 FQQEYTVYGRHNQPC-PQCGG 247 >gi|183981796|ref|YP_001850087.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] gi|238689243|sp|B2HJJ6|FPG_MYCMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|183175122|gb|ACC40232.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium marinum M] Length = 292 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 35/305 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL + L+ +++VHLGMSG ++ P+ HV IS + Sbjct: 61 KYLWLTLDAGAPTTGRDDPDTALVVHLGMSGQMLLGGV--------PRAEHVRISAVLDD 112 Query: 108 NTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 T + + D R FG DLV P+ L +P D F+ + K+ Sbjct: 113 GTV---LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKH 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V Sbjct: 170 SEIKRQLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADV 223 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FY Sbjct: 224 MREALAKGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFY 282 Query: 284 CTYCQ 288 C CQ Sbjct: 283 CPRCQ 287 >gi|323141559|ref|ZP_08076444.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] gi|322413971|gb|EFY04805.1| DNA-formamidopyrimidine glycosylase [Phascolarctobacterium sp. YIT 12067] Length = 270 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 18/287 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PEVE +R+ L ++ + + ++ + +++ P F GK I V RR KYL++ Sbjct: 1 MPEVEQVRKTLAPHIEGKKILAVEIYLERLIKYPQPDAFIKGLVGKTISSVGRRGKYLVL 60 Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 +IVHL M+G+ + + ++ P + +L+++ + D R F Sbjct: 61 HTAPKQQLIVHLRMTGALLAQPSAAPAPAYA----KIKFTLSDDVTM-----WFTDIRTF 111 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 G + LV + Y TLGPEP F A YL K +K+ +L+Q+I+AG+GN Sbjct: 112 GTLYLVTDNDTY-IEGYETLGPEPLSEGFTAGYLLPLAQKSKKAIKSFILDQQIIAGLGN 170 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY E L + + P+RK SL + +L + + V+ I G++ RDY Sbjct: 171 IYADECLALSGILPMRKACSLSAAE------VGRLCEAVNAVIAQGIKNRGTTFRDYKDG 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G+ G QN VYG+ G+PC CG +++ GR T YC +CQK Sbjct: 225 EGNKGDNQNHLLVYGRGGKPC-KKCGALLQTTKVGGRGTVYCEHCQK 270 >gi|296115226|ref|ZP_06833867.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] gi|295978327|gb|EFG85064.1| formamidopyrimidine-DNA glycosylase [Gluconacetobacter hansenii ATCC 23769] Length = 278 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 107/282 (37%), Positives = 155/282 (54%), Gaps = 20/282 (7%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + + ++ + R+ LR+ FP + RG+ I RR KY+L+ L+ ++ Sbjct: 2 RGMRLHLEGHQIATATPLREGLRWPFPPGLGDSLRGRVIARFERRGKYILVHLDDGQVLL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSG ++ H + + +H H+ I R DPRRFG +DL+ Sbjct: 62 MHLGMSGRVVLGHDTT---VPAARHEHLVIVTVQGA-----RCGLVDPRRFGIVDLLAPG 113 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 +P L +GPEP N F+A+ L + S +K LL+Q++VAG+GNIYV EAL+R Sbjct: 114 TAMSHPLLARMGPEPLGNGFDAVGLARAARGRRSPIKALLLDQRVVAGLGNIYVSEALFR 173 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A + P R SL + L+ I+ VL +AI AGGSSLRDYV DG +GYFQ+ Sbjct: 174 AGVHPERAGASLDEAQ------CAALVASIRDVLTEAIAAGGSSLRDYVKPDGELGYFQH 227 Query: 252 AFSVYGKTGEPC-----LSNCGQMIRRIVQAGRSTFYCTYCQ 288 A+ VYG+ G+ C L C ++RIVQAGRS+F+C Q Sbjct: 228 AWRVYGREGQGCPDCPGLPQCAG-VQRIVQAGRSSFFCPRRQ 268 >gi|320352499|ref|YP_004193838.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] gi|320121001|gb|ADW16547.1| formamidopyrimidine-DNA glycosylase [Desulfobulbus propionicus DSM 2032] Length = 279 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+ RR L+ + TV + LR P ++I + RRAKY Sbjct: 1 MPELPEVEVTRRGLLAPLSGRTVVRVSWSAHRLRGPIPRKLLQEHIAAQQIRTIDRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ + +++HLGM+G + +H+H+ + L N V +ND Sbjct: 61 LLLRMVNGAVLVIHLGMTGKLGLIQGQTTLH----KHDHLVLHLDNG-----LDVRFNDS 111 Query: 120 RRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG + + + + R G EP +F A L + +K+ L+N +++ Sbjct: 112 RRFGSIVVWPPDHAAQLEADFSRKEGLEPFGPAFIADNLLALARGRRVAVKSLLMNSRLI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+ A+++P + L + ++IQE +++L AIDAGGSS+ Sbjct: 172 AGIGNIYANEILFAARIAPQQPAHLLTEKE------WGRIIQESRRILQLAIDAGGSSIS 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D++ + G GYFQ +VYG+ PC CGQ I + +Q GR+T++C CQ Sbjct: 226 DFLGVSGHPGYFQLQLAVYGRKDAPC-PRCGQAILKTIQGGRATYHCPGCQ 275 >gi|15827876|ref|NP_302139.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae TN] gi|221230353|ref|YP_002503769.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] gi|7531120|sp|O69470|FPG_MYCLE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789446|sp|B8ZRZ2|FPG_MYCLB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3150225|emb|CAA19197.1| formamidopyrimidine-dna glycosylase [Mycobacterium leprae] gi|13093429|emb|CAC30611.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae] gi|219933460|emb|CAR71753.1| formamidopyrimidine-DNA glycosylase [Mycobacterium leprae Br4923] Length = 282 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P + G +I + RR Sbjct: 1 MPELPEVEVVRRGLQDYIVGKTITAVRVHHPRAVRRHVAGPTDLTNRLLGTRINGIDRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL L+ +++++VHLGMSG ++ P+ +HV IS + T + + Sbjct: 61 KYLWFLLDTDIALVVHLGMSGQMLLGTV--------PRVDHVRISALFDDGTV---LNFT 109 Query: 118 DPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R G DL+ P+ L +P D F+ + K+S LK LL+Q Sbjct: 110 DQRTLGGWLLADLMTVDGSVLPVPVAHLARDPFDPRFDVEAVVKVLRCKHSELKRQLLDQ 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + V+GIGNIY EALWRA++ R +L + V+ D++ GG+ Sbjct: 170 QTVSGIGNIYADEALWRAEVHGARIAATLTRRQLAAVLD------AAADVMRDSLAKGGT 223 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GE C CG ++ R RS+FYC CQ Sbjct: 224 SFDSLYVNVNGESGYFDRSLDAYGREGEGC-RRCGAVMHREKFMNRSSFYCPRCQ 277 >gi|123965595|ref|YP_001010676.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9515] gi|166198729|sp|A2BUV8|FPG_PROM5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123199961|gb|ABM71569.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9515] Length = 293 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 103/309 (33%), Positives = 147/309 (47%), Gaps = 36/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP-HHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L +KN + + + + + F + I RR K Sbjct: 1 MPELPEVETVRKGLEQKLKNFIIKRVEICRESTVAYPIDKQDFVKGLQNSLINKWDRRGK 60 Query: 59 YLLIELE----------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 YL+ +L+ N S++VHL M+G F P +H + + Sbjct: 61 YLIAKLKKADRNHTYIENEMSLKNNGSLVVHLRMTGYFTFNKN----PTSPCKHTRIRLF 116 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQF 160 NN + Y D R FG M V L + L LGPEP FN YLT Sbjct: 117 DNNNNELR-----YIDVRSFGQMWWVREGLSPKNIIKGLGALGPEPFSEKFNISYLTKII 171 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K ++K+ LL+Q IVAGIGNIY E+L+ A +SP R+ R++ K L KL Sbjct: 172 LNKTRSIKSILLDQTIVAGIGNIYADESLYSAGISPFREARTI------EKHELIKLRIA 225 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I +VL +I AGG++ D+ ++G G F +VY +TG+ C + C +I R +GRS Sbjct: 226 IIEVLKKSIGAGGTTFSDFRDLEGENGNFGLQTNVYRRTGKKCHA-CKNLIERQKISGRS 284 Query: 281 TFYCTYCQK 289 T +C CQK Sbjct: 285 THWCRKCQK 293 >gi|320160672|ref|YP_004173896.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] gi|319994525|dbj|BAJ63296.1| formamidopyrimidine-DNA glycolase [Anaerolinea thermophila UNI-1] Length = 271 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 143/297 (48%), Gaps = 34/297 (11%) Query: 1 MPELPEVEIIR-------RNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIID 52 MPELPEV+ I R + +T + +K L F G++I D Sbjct: 1 MPELPEVQTIVSVLRDGGRG-APSILGKQITAANVAWQKTLAMPDLFTFQQNITGEEIRD 59 Query: 53 VSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + RR K++ I L+ + +HL MSG +E ++ + H+ + + ++ Sbjct: 60 IRRRGKFIWIILQS-AHLFIHLRMSGDVRVEPSTSPLQL----HDRLWLEFSDG-----L 109 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+++NDPR+FG + L E + LGPEP D S + + K LK LL Sbjct: 110 RLVFNDPRKFGRVWLAENPQDV----IGDLGPEPLDESLSPTQFHQRLTKNRRQLKALLL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GNIY EAL+ AKL P R + SL +L+Q I++VL + I Sbjct: 166 DQNFLAGVGNIYSDEALFLAKLHPKRSSDSLSPEES------ARLLQAIRQVLEEGIRKN 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S+ G FQN+F VY +TGEPC CG I RI + R T +C CQ+ Sbjct: 220 GASIDWVYRG----GEFQNSFRVYQRTGEPC-PICGTPIERITVSQRGTHFCPSCQR 271 >gi|77359412|ref|YP_338987.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] gi|76874323|emb|CAI85544.1| formamidopyrimidine DNA glycosylase [Pseudoalteromonas haloplanktis TAC125] Length = 258 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 20/277 (7%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + + N VT + +H ++R+ P G + V RRAKYLL+ +I+ Sbjct: 2 GITPHVLNQVVTKVNIHNGSMRWPVPDDVYQ-LTGLTVTGVERRAKYLLLHCALGSTIL- 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSG+ + S +P+K +H+H+ N + NDPRRFG Sbjct: 60 HLGMSGNLRVV--SANEPLK--KHDHIEFIFANGK-----ALRLNDPRRFGCCLWQAPGS 110 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + L LGPEP + F A + Q K +K ++N IV G+GNIY E+L++A Sbjct: 111 V--HKLLAKLGPEPLTDEFFAKQVYQQSRNKKVPVKQFIMNNAIVVGVGNIYANESLFKA 168 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + P R+ + + LI I+ L AI GG++L+D+ DG GYF Sbjct: 169 GIDPRREAGKVSLKS------FEALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQ 222 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PCL C ++ + RST +C CQK Sbjct: 223 LLVYGRKGQPCL-VCKSELQEVRLGQRSTVFCGKCQK 258 >gi|226365984|ref|YP_002783767.1| formamidopyrimidine-DNA glycosylase [Rhodococcus opacus B4] gi|254789448|sp|C1B2Q5|FPG_RHOOB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|226244474|dbj|BAH54822.1| formamidopyrimidine-DNA glycosylase/AP lyase [Rhodococcus opacus B4] Length = 289 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 24/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + ++ + LH + +R P + G++I RR Sbjct: 1 MPELPEVEVVRRGLERHIVGASIDSVDILHPRAIRRHLPGAADLAGQLTGERIAGADRRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + LE ++++VHLGMSG +++ + +H + L + + + Sbjct: 61 KYLWLVLEPSTVALVVHLGMSGQMLVQPPE----LPTEKHLRIRARLDSG-----LDLRF 111 Query: 117 NDPRRFGFMDL---VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG L VE + + +P D+ F+ K+S +K LL+ Sbjct: 112 VDQRTFGGWALAPLVEVDGSLVPDSVAHIARDPLDSRFDLAATVKVVRGKHSEIKRVLLD 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRA++ R T L + ++ Q+V+ +A+ GG Sbjct: 172 QTVVSGIGNIYADEALWRAQIHGNRLTDRLTGPR------IGAVLTAAQQVMREALSQGG 225 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +S YV+++G GYF + S YG+ PC CG IRR RS+F C CQ+ Sbjct: 226 TSFDALYVNVNGESGYFDRSLSAYGQEDRPC-PRCGTAIRREKFMNRSSFSCPKCQR 281 >gi|253700705|ref|YP_003021894.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] gi|251775555|gb|ACT18136.1| formamidopyrimidine-DNA glycosylase [Geobacter sp. M21] Length = 271 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 86/288 (29%), Positives = 135/288 (46%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + +H LR P + G+ I+ ++RR KYL Sbjct: 1 MPELPEVEVTRLGIAAQLVGARIAAVAVHSPKLRTLVPPELPSILAGQSILSLTRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I S+++HLGM+G + H+H + L + + ND R Sbjct: 61 IITCRQG-SLLLHLGMTGHLRLVPAGAG----AGAHDHFDLVLESG-----LILRLNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + + ++ LR +GPEP + YL + K + L+ L++ +VAG+ Sbjct: 111 RFGSIH-FTSGDPLKHKLLRGIGPEPLTDELTGHYLYRKSRGKKAPLQRFLMDSSVVAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P + SL + + +L I+K L +I+AG + D+ Sbjct: 170 GNIYAAETLFRCGMLPFTQAGSLSEGD------CDRLCDCIKKTLAASIEAGR--VMDFT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + YF VYG+ G C CG I R RSTF+C CQ Sbjct: 222 VREEKLVYFPQQLYVYGREGLAC-RECGSAIERGRLGNRSTFHCPRCQ 268 >gi|227548992|ref|ZP_03979041.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227078943|gb|EEI16906.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 274 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 137/289 (47%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L + + + G ++ RR K++ Sbjct: 1 MPELPEVEVVRRGLDTHLVGRAFRSVEVLHPRAVRGNAVDLREVLPGLQVTGTGRRGKFM 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ +++VHL MSG ++ H + L + + + D R Sbjct: 61 WLTLDDGAALMVHLRMSGQMLVGPPGTV----TSPHLRIRALLDD------VELAFVDQR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG + + P+P D F+ + ++S +K LLNQ IV+GI Sbjct: 111 TFGSWLYASLGADGVPESISHIAPDPFDADFDIVQRARLVRTRSSAIKTVLLNQGIVSGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 G+IY EALW A + P R+ RSL Q++ ++++ + V+ +A+ GG+S Y Sbjct: 171 GSIYADEALWAAGVKPTRRARSLRQSDAV------QVLERSRDVMAEALAQGGTSFDSLY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+++G+ GYF + + YG+ G+ C CG +R++V GRS+ +C CQ Sbjct: 225 VNVNGASGYFSRSLNAYGRAGQRC-RRCGTEMRKVVVNGRSSCFCPGCQ 272 >gi|57233872|ref|YP_182098.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] gi|57224320|gb|AAW39377.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides ethenogenes 195] Length = 270 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 138/288 (47%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + +T + F+ G ++ +SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKITRMEALWAKTLCPPETEFNKLVSGLQVTGLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L G L I VHL MSG + P+ L N +V + D R Sbjct: 61 IISLSGGLFISVHLKMSGGLTAVKAETEQF---PRFTRAVFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++L+ + L LGPEP + F L + + +K LL+QK++AG+ Sbjct: 113 KFGRINLLTS----LDTILEKLGPEPLEGDFTPEVLGKRLSGRKGPIKAVLLDQKVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y EAL++A L+P+R SL + T KL IQ VL AI G+S+ Y Sbjct: 169 GNMYADEALFKACLNPLRPADSLSKAEVT------KLHSAIQSVLHKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ +YC +CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGEVC-PECGAPINRQLIRQRACYYCPHCQ 269 >gi|262202010|ref|YP_003273218.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] gi|262085357|gb|ACY21325.1| formamidopyrimidine-DNA glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFS--AATRGKKIIDVSRRA 57 MPELPEVE +RR L + T+ + + H + R R K + V RR Sbjct: 1 MPELPEVETVRRGLADHLVGRTIRKVEVLHPRAARRHVGGDLDLIGRLRNKSVTGVRRRG 60 Query: 58 KYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 KYL +++ +++VHLGMSG +I P H H+ I + + + + Sbjct: 61 KYLWLDVADARDRAAVVVHLGMSGQMLIARAGA------PDHTHLRIRASLDDGNE---L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQ---------YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + D R FG + + + + + +P D F+A + K+S Sbjct: 112 RFVDQRTFGGWHVDDYAEPEDAVAQSSSLLPTSVAHIARDPFDPDFDAEATVSRIRTKHS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +++G+GNIY EALWRA+L R + + L +L+ + V+ Sbjct: 172 EIKRVLLDQTVISGVGNIYADEALWRARLYGGRVADGISRP------KLRELLTAVSDVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 +A+ GG+S YV+++G GYF+ + + YG+ G+PC CGQM+RR RS+++C Sbjct: 226 GEALAVGGTSFDALYVNVNGQSGYFERSLNAYGRAGQPC-RRCGQMMRRESFMNRSSYFC 284 Query: 285 TYCQK 289 CQ+ Sbjct: 285 PRCQR 289 >gi|93117327|gb|ABE99581.1| fpg [Neisseria meningitidis] Length = 245 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 14/257 (5%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R + ++ TV + L + LR+ G++++ RRAKYLLI + ++ Sbjct: 3 RGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLLIRFQTG-VLL 61 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 +HLGMSGS I S + + +H+HV I ++ T + Y DPR+FG + E Sbjct: 62 IHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-G 115 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 ++ +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+R Sbjct: 116 IEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFR 175 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 176 AGISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQ 229 Query: 252 AFSVYGKTGEPCLSNCG 268 ++VYG+ +PC CG Sbjct: 230 EYTVYGRHNQPC-PQCG 245 >gi|124023869|ref|YP_001018176.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9303] gi|123964155|gb|ABM78911.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9303] Length = 291 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 92/307 (29%), Positives = 136/307 (44%), Gaps = 34/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R+ F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLIDFQIDQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELE--------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L VHL M+G F H + + P H V I Sbjct: 61 YLMASLHHDFAQPSADSEPDPDGGWWGVHLRMTGQFQW-HEAISSPCP---HTRVRI--- 113 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHK 162 N K + + D R FG M V + L+ LGPEP ++FN+ YL+ + Sbjct: 114 --WNKKDEELRFVDTRSFGQMWWVPPGNAPETIITGLQKLGPEPFSSAFNSSYLSKRLKG 171 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K+ALL+Q IVAG GNIY E+L+ A++ P + L + L +L + Sbjct: 172 SKRPIKSALLDQSIVAGAGNIYTDESLFAARILPHTPSGQLKKVE------LERLCDCLT 225 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ D+ ++G G + VY + G+ C C IRR GR T Sbjct: 226 EVLRVSIGAGGTTFSDFRDLEGMNGNYGGQAWVYRRGGQAC-RICSTPIRRESLCGRGTH 284 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 285 WCPNCQR 291 >gi|33862459|ref|NP_894019.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. MIT 9313] gi|39931227|sp|Q7V8Y5|FPG_PROMM RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|33640572|emb|CAE20361.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. MIT 9313] Length = 291 Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 92/307 (29%), Positives = 136/307 (44%), Gaps = 34/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR--FDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + + + + + R+ F G + RR K Sbjct: 1 MPELPEVETVRRGLADRLVDFQIGQVEVCRERAIASPGGSALFIKMLCGMHVGSWLRRGK 60 Query: 59 YLLIELE--------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 YL+ L VHL M+G F H + + P H V I Sbjct: 61 YLMASLHHEIAQSSADSEPDPDGGWWGVHLRMTGQFQW-HEAISSPCP---HTRVRI--- 113 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHK 162 N K + + D R FG M V + L+ LGPEP ++FN+ YL+ + Sbjct: 114 --WNKKNEELRFVDTRSFGQMWWVPPGNAPETIITGLQKLGPEPFSSAFNSSYLSKRLKG 171 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K+ALL+Q IVAG GNIY E+L+ A++ P + L + L +L + Sbjct: 172 SKRPIKSALLDQSIVAGAGNIYTDESLFAARIRPHTPSGQLKKVE------LERLCNCLT 225 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL +I AGG++ D+ ++G G + VY + G+ C C IRR GR T Sbjct: 226 EVLRVSIGAGGTTFSDFRDLEGINGNYGGQAWVYRRGGQAC-RICSTPIRRESLCGRGTH 284 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 285 WCPNCQR 291 >gi|225021994|ref|ZP_03711186.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] gi|224945280|gb|EEG26489.1| hypothetical protein CORMATOL_02026 [Corynebacterium matruchotii ATCC 33806] Length = 308 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 92/316 (29%), Positives = 141/316 (44%), Gaps = 40/316 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE IRR L + T+ D+ +H F + G+ II + RR Sbjct: 1 MPELPEVETIRRGLAEHVCGRTIADVAVHHPRAIRHVLGGEGEFRSEILGRSIIGLGRRG 60 Query: 58 KYLLIELE---------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 K+L + L G+ ++VHLGMSG +I+ ++ +H Sbjct: 61 KFLWLNLADPAVAAASASSGPTSQPTPQAGDQVVVVHLGMSGQMLIKDSNANSDDPKFKH 120 Query: 97 NHVTISLTNNTNTKKYRVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNA 153 + + +NT ++ + D R FG+ LV+ L + + D Sbjct: 121 CRIQVRFDDNT-----QLWFVDQRTFGYWLPTQLVDAGLGLVPETADHIARDLLDPELKL 175 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + H K +K LLNQ+I+AGIGNIY E LW A ++P + +L Sbjct: 176 SEVASMMHSKTLAVKKLLLNQEIIAGIGNIYADEMLWFAAINPNQPANTLDPA------A 229 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L L+ + V+ A+ GG+S D YV+++G GYF YG+ G PC CG ++ Sbjct: 230 LKNLLMAGRTVMRAAVARGGTSFDDLYVNVNGESGYFDVELHAYGQDGRPCD-RCGTILV 288 Query: 273 RIVQAGRSTFYCTYCQ 288 + RS+ YC +CQ Sbjct: 289 KEKFTNRSSHYCPHCQ 304 >gi|257055002|ref|YP_003132834.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256584874|gb|ACU96007.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 287 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + V+ + + H + +R F G KI V RR Sbjct: 1 MPELPEVEVVRAGLEKHVLGRIVSSVEVLHPRAIRRHVLGEADFVGRLVGAKITAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL EL +++ HLGMSG +I+ + + + +H V +++ + + Sbjct: 61 KYLWFELADGTAVLAHLGMSGQMLIQ----PRGVVDEKHLRVRFRFSDD----GPELRFV 112 Query: 118 DPRRFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG DLVE + + +P D F+ + + + +K ALL+Q Sbjct: 113 DQRTFGGLSLTDLVEVEGTVLPSAIAHIARDPLDPLFDVVATARALRTRRTEVKRALLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +V+GIGNIY EALWR L R L ++ +++++A+ GG+ Sbjct: 173 TLVSGIGNIYADEALWRVGLHWARPADRLTATQARG------VLAAAAEMMVEALRVGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S YV+++G GYF + YG+ GEPC CG +I R RS+F C CQ Sbjct: 227 SFDALYVNVNGESGYFSRSLDAYGREGEPC-RRCGSLIVREAFTNRSSFSCPRCQ 280 >gi|282891369|ref|ZP_06299871.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498866|gb|EFB41183.1| hypothetical protein pah_c050o176 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 275 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 141/294 (47%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R + ++ T+ + + + P FS G+KI+++SRR K Sbjct: 1 MPELPEVETITREMREAKLEGRTIEKAQIFWERTIATPSPSIFSKKIVGQKILNISRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 ++++ L S+++HL M+G F+I + IK H V + L + + Y D Sbjct: 61 FIILTLSKE-SLLIHLRMTGKFLI----AKEQIKPDSHERVRLFLDDGRILR-----YED 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV+ + L LG EP +F + +K LL+Q +A Sbjct: 111 QRKFGKWYLVKNPDEV----LGALGIEPLSENFTLSTFQKILTGHHRQIKPFLLDQHYIA 166 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-- 236 G+GNIYV EALW +K+ P+R +L + + L + I VL I G+SL Sbjct: 167 GLGNIYVDEALWVSKIHPLRSVSTLTKKE------IKALHEAIPIVLQTGIKNIGTSLGA 220 Query: 237 --RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +Y + G G QNA +V+ K G PC C I+++ R T YC CQ Sbjct: 221 ARANYFSVSGRRGSNQNALNVFRKDGLPC-PRCNTTIKKMTVGQRGTHYCPVCQ 273 >gi|311110325|ref|ZP_07711722.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] gi|311065479|gb|EFQ45819.1| DNA-formamidopyrimidine glycosylase [Lactobacillus gasseri MV-22] Length = 254 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 85/250 (34%), Positives = 125/250 (50%), Gaps = 15/250 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K T+ I + + + P F K+I+ + R KYL Sbjct: 1 MPEMPEVETVRRTLTPLVKGKTIAKINIWYPKIIVNDPAEFVKKLTNKRILKIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L+++ HL M G + + K +H HV T+ T + Y+D R Sbjct: 61 LFRFNDDLTMVSHLRMEGKYHLVSPDTPK----GKHEHVEFIFTDGT-----ALRYDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LVET + + +R LGPEP FN Y +K N+KN LL+Q IV G+ Sbjct: 112 KFGRMHLVETGTERKTTGIRHLGPEPNTAEFNLKYFVDALSQKKKNIKNTLLDQTIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E LW++K+ P L P D + L Q I + A G+++ Y+ Sbjct: 172 GNIYVDEVLWKSKIHP------LSSAKAIPADKVKNLYQNINHTIAIATKERGTTVHTYL 225 Query: 241 HIDGSIGYFQ 250 +G IG +Q Sbjct: 226 DANGEIGGYQ 235 >gi|145296036|ref|YP_001138857.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum R] gi|166215621|sp|A4QFD9|FPG_CORGB RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|140845956|dbj|BAF54955.1| hypothetical protein [Corynebacterium glutamicum R] Length = 286 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 140/302 (46%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ + + A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L +EL +L ++VHLGMSG +I+ H I L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDAPI----SPHLRAKIELDNGDE- 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 V + D R FG+ L L P + + + D S + + + S +K Sbjct: 116 ----VWFVDQRTFGYWWL--GDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSEIK 169 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A Sbjct: 170 RLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKA 223 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G+ GYF + + YG+TGEPC CG I R R + YC C Sbjct: 224 LAQGGTSFDALYVNVNGNSGYFSLSLNAYGQTGEPCG-RCGTQIVRENFMNRGSHYCPNC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|54026154|ref|YP_120396.1| formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|81679878|sp|Q5YS09|FPG_NOCFA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54017662|dbj|BAD59032.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 294 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 32/298 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + V + + H +++R +A G+++ RR Sbjct: 1 MPELPEVEVVRRGLAEHVAGRVVGAVTITHPRSVRRHLAGSADLAARMTGRRVRAAQRRG 60 Query: 58 KYLLIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL + + + +++VHLGMSG +++ + +H H+ +L + + Sbjct: 61 KYLWLTFDEPGAADETALDAALVVHLGMSGQMLVQPAAAP----VEKHAHIRAALDDGSE 116 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQ---YPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + D R FG L + P+ + +P D F+A + KNS Sbjct: 117 LR-----FVDQRTFGGWALAPLAEVDGSLVPEPVAHIARDPLDPRFDAESVVAAIRAKNS 171 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q +V+GIGNIY E+LWRA ++ R L + + +L+ E++ V+ Sbjct: 172 EIKRVLLDQTVVSGIGNIYADESLWRAGINGNRLASGLTRP------AVRRLLAEVRAVM 225 Query: 226 IDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 ++A+ AGG+S YV+++G GYF+ A +VYG+ EPC CG I R RS++ Sbjct: 226 LEALAAGGTSFDALYVNVNGQSGYFERALAVYGRQDEPC-RRCGAPIVREKFMNRSSY 282 >gi|256397116|ref|YP_003118680.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] gi|256363342|gb|ACU76839.1| formamidopyrimidine-DNA glycosylase [Catenulispora acidiphila DSM 44928] Length = 290 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 93/302 (30%), Positives = 147/302 (48%), Gaps = 28/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L TV + H + +R D P F+A G ++ RR Sbjct: 1 MPELPEVEVVRRGLERWAVGRTVAAAEVLHPRAIRRHPDGPEDFAARAAGLTLLSAERRG 60 Query: 58 KYLLIELEGNLS-----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + L + + HLGMSG ++ +P P H+ I T + + Sbjct: 61 KFLWLPLGEGETSVGEAVTGHLGMSGQLLL------QPSGTPDEKHLRIRFTFADDGPEL 114 Query: 113 RVIYNDPRRFGFMDL----VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R + D R FG M L + + + + D F+ + + ++N+ LK Sbjct: 115 R--FVDQRTFGGMALEKLEHDRQGVVVPASVVHIARDVLDPEFDVDFFHSELRRRNTGLK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q V+GIGNIY EALW A+L R T + + + ++++ ++V+ A Sbjct: 173 RALLDQTRVSGIGNIYADEALWIARLHYDRPTSKMRRPDTD------RVLEAAREVMTAA 226 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G GYF + YG+ GEPC CG I+R RS+++C C Sbjct: 227 LAVGGTSFDSLYVNVNGESGYFARSLHAYGREGEPC-ERCGTPIKRESFMNRSSYFCPKC 285 Query: 288 QK 289 Q+ Sbjct: 286 QR 287 >gi|297181484|gb|ADI17671.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0130_23I23] Length = 271 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 165/288 (57%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + + ++ I + + +LR F + KKI V RRAKY+ Sbjct: 1 MPELPEVETTKRGIEPYISTRKISSIYISKYDLRIKFNKNKKNNILNKKIEGVRRRAKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ N S+++HLGM+G+ I T + +H+H+ SL + + +IYND R Sbjct: 61 LIDFSNNYSLLIHLGMTGNLRIADT-----LSLGKHDHIAFSLNSKKH-----LIYNDVR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +++ + L GP+P + S + YL + K + +K+ LLN +I++GI Sbjct: 111 RFGLILIIKKGQRN--KLLENNGPDPFEKSADYKYLHKKIEKSKATIKSILLNNRIISGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+ +K+SP++ S+ D +++ +K+L AI++GG++L DY+ Sbjct: 169 GNIYACEILFSSKISPLKLGSSITH------DECKIILKNSKKILKKAINSGGTTLNDYL 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D GYF+ +VY + E C C Q I+RI+Q GRSTF+C+ CQ Sbjct: 223 NADAKPGYFKIQLNVYDRESEDC-KKCSQKIKRIIQNGRSTFFCSKCQ 269 >gi|313836650|gb|EFS74364.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314928157|gb|EFS91988.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972156|gb|EFT16253.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907981|gb|EGG27741.1| DNA-formamidopyrimidine glycosylase [Propionibacterium sp. P08] Length = 282 Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F A G + V R Sbjct: 1 MPELPEVETVRAGLEDHVIPAVVEGVDVIDARGLRPSGGPEDAALFQTALTGHQFTAVRR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L +++ HLGMSG F + + +H + I+L + + + Sbjct: 61 RGKYLWFVLNDGTAMLAHLGMSGQFRVVDRHATRH----RHTRIVIALNDGRDLR----- 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L L P+ + P+P + F+ + + + S LK +LL+Q Sbjct: 112 FLDQRTFGGLALAPL-LDGIPGPVVHIAPDPFEKCFDVDEVARRLRTRKSTLKKSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWRA+ P L Q +L+Q ++V+ +AI AGG+S Sbjct: 171 LVSGIGNIYADETLWRARYHPETPCSYLSQPKAV------ELLQTAREVIAEAISAGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G GYF YG+ +PC CG +I R RS+F C CQ+ Sbjct: 225 FDALYVNVNGESGYFSRVLDAYGRENQPC-HRCGALIVREHFMNRSSFRCPRCQR 278 >gi|50954669|ref|YP_061957.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71648675|sp|Q6AFJ3|FPG_LEIXX RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|50951151|gb|AAT88852.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 297 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 21/303 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + ++L+ P F + G+ + +RR Sbjct: 1 MPELPEVEVVRAGLAPAVTGATILGVEVFELRSLKRHDPLAGSFESLLTGRSMQTPARRG 60 Query: 58 KYLLIELEGNL--SIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTISLTNNT 107 K+L I L+ + +I+ HLGMSG ++ + I++P+H + + + Sbjct: 61 KFLWIPLDSSPRSAIVAHLGMSGQILLRDPGTVENGLLRIRLYIEHPEHGELWVHFVDQR 120 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V P G + T + + +P D F+ ++ S + Sbjct: 121 LFGSMAVDALVPTVDGAPAGLGTDEALLPAQVSHIARDPLDPVFDDAAFAAVLARRRSGI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGNIY E+LW A++ +L + + L+ E+++VL Sbjct: 181 KRVLLDQTLISGIGNIYADESLWAARIHYDHPATALSRPR------VRTLLAELRRVLGR 234 Query: 228 AIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G+ GYF + VYG+ G+PC CG I R R + +C Sbjct: 235 ALAEGGTSFDAQYVNVNGASGYFSRSLHVYGRQGQPCD-RCGTAIVRESFMNRGSHFCPR 293 Query: 287 CQK 289 CQ+ Sbjct: 294 CQR 296 >gi|317051383|ref|YP_004112499.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] gi|316946467|gb|ADU65943.1| formamidopyrimidine-DNA glycosylase [Desulfurispirillum indicum S5] Length = 278 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNL-MMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + +L + T++D+ + + P F G+ + + RRAK Sbjct: 1 MPELPEVQTLVDDLCHRALVGQTISDVQVTWPRSIASHTPADFRHQLTGQTLTAIRRRAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL++EL ++VHL M+G F + + I H HV + L + + ++D Sbjct: 61 YLVMELSSGWGLLVHLRMTGKFDLCDPVKPRDI----HEHVILCLGSGQELR-----FHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV L LG EP F L +N+ LK+ LL+Q VA Sbjct: 112 TRKFGRFSLVP----DTVGALSHLGVEPLSPEFTPEVLGRLLAGRNTMLKSFLLDQTKVA 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ A+L P R + ++ +Q+ L + + G+S + Sbjct: 168 GIGNIYADEALFEARLHPANPCRLVAAEQVASLHGAIIMV--LQRGLRNMGTSLGTSKGN 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G ++ V+ +TG PC + CG I RI+ RST +C CQ Sbjct: 226 FYSVAGRPGRNEDELKVFRRTGTPCCA-CGTTIERIILIQRSTHFCPLCQ 274 >gi|145593839|ref|YP_001158136.1| formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] gi|189044675|sp|A4X4F8|FPG_SALTO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145303176|gb|ABP53758.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] Length = 287 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R+ L + + + ++ + HF+ R + DV RR Sbjct: 1 MPELPEVETVRQGLAQWVTDRRIAEVQVLHPRAVRRHAAGAAHFADVLRETTVRDVRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+ +++ HLGMSG +++ + H V ++ + + Sbjct: 61 KYLWLPLDSGDAVVGHLGMSGQLLLQPAAAPDET----HLRVRFRFADD----GPELRFV 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + V + + +P D F+ ++ + +K ALL+Q ++ Sbjct: 113 DQRTFGGLS-VSAGGAELPTEIAHIARDPLDPEFSDATFVAALRRRRTEIKRALLDQTLL 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRA+L R T L + +L+ ++ VL +A+ GG+S Sbjct: 172 SGVGNIYADEALWRARLHGTRPTDGLTGP------AVLRLLGHVRDVLGEAVKEGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF A +VYG+ +PC CG+ +RR RS+F C CQ Sbjct: 226 ALYVNVNGESGYFDRALNVYGRADQPC-RRCGEPVRREAFMNRSSFSCPRCQ 276 >gi|284928877|ref|YP_003421399.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] gi|284809336|gb|ADB95041.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [cyanobacterium UCYN-A] Length = 284 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 136/294 (46%), Gaps = 21/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + T+ + L R F + RR K Sbjct: 1 MPELPEVESICRKLNELTTGQTILGGQVLLARSLAYPSSMQEFLNLIDNVDLKIWKRRGK 60 Query: 59 YLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YLL EL+ N I+ HL M+G ++ S P H + L Y + + Sbjct: 61 YLLAELDSNKGWIVFHLRMTGQLLLTQQS------EPLSKHTRLRLFCKN---SYELRFI 111 Query: 118 DPRRFGFMDLVETS--LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + ++ S + L+ LG EP N F+ YL + N+K LL+Q Sbjct: 112 DIRTFGKVWVIPPSYNPEDIITGLKKLGVEPFSNDFSINYLIENLTRYKRNIKTILLDQS 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I+AGIGNIY EAL+R+ + P K L + L + I +VL +ID GG++ Sbjct: 172 IIAGIGNIYADEALFRSNIHPETKGAELTLKQ------IKNLQKAILEVLSKSIDEGGTT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+++I G+ G + VYG+ PC C I+RI GRS+ +C CQ+ Sbjct: 226 FSDFLNITGNKGNYTEFAWVYGRNHSPC-RICSTPIKRIKLNGRSSHFCPKCQQ 278 >gi|87303067|ref|ZP_01085865.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] gi|87282234|gb|EAQ74194.1| Formamidopyrimidine-DNA glycolase [Synechococcus sp. WH 5701] Length = 281 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 139/297 (46%), Gaps = 24/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L +K + + + R+ F A G + SRR K Sbjct: 1 MPELPEVETVRRGLERQLKGFEIERVEVLRQRAIAAPEEVDQFRAGLIGCLVGTWSRRGK 60 Query: 59 YLLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 YL+ EL + VHL M+G F+ +P + H V + + Sbjct: 61 YLMAELSRDGQSAGHWGVHLRMTGQFLW----LEEPREPCAHTRVR-----CWSRLGQEL 111 Query: 115 IYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG M + L L+ LGPEP +F+ YL + +K ALL Sbjct: 112 RFIDVRSFGQMWFIPCGLDCSCVMTGLQKLGPEPFSEAFSGAYLQQKLKGSVRPIKAALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +VAG+GNIY E+L+ A ++P R++ SL + +VL +I +G Sbjct: 172 DQALVAGVGNIYADESLFTAGVAPQRRSGSLSLLELERLRR------SLIEVLEISIGSG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G++ D+ + G+ G + VY + G+PC CGQ I+R GRS+ +C+ CQ+ Sbjct: 226 GTTFSDFRDLSGTNGNYGGVAWVYRRGGQPC-RRCGQPIQRERLGGRSSHWCSNCQR 281 >gi|227498716|ref|ZP_03928858.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] gi|226904170|gb|EEH90088.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus sp. D21] Length = 274 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R +L + + D+ L + + P F R + V RR KY Sbjct: 2 MPELPEVEQVRISLEPYVLEQKIEDVRILLPRMIVHPSPEGFRKGLRDAVVTAVLRRGKY 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + L+G ++VHL M+G+F+ + P + + Y + D Sbjct: 62 LSLMLKGGERLMVHLRMTGAFLAVKKGESLPP---------FARWGLILSGAYDLWMTDI 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG L + LGPEP D++ YL + K + +K +L+Q I+AG Sbjct: 113 RTFGTAALYQEGEPLD-KGFEALGPEPLDDAMTGTYLKERARHKKTQVKPFILDQSIIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E+L+ A + P ++ + + +L I++V+ A+ G++ R+Y Sbjct: 172 LGNIYADESLFAAGIRPTKRVSRMTKKE------WERLAIAIKEVIQSALRHHGTTFRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DG +G VY + G+PC CG+ + + AGR T YC +CQK Sbjct: 226 QDADGKMGDNFRYLKVYHRGGKPC-PLCGKTLTKTKVAGRGTVYCAHCQK 274 >gi|118617607|ref|YP_905939.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|166215639|sp|A0PQ49|FPG_MYCUA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|118569717|gb|ABL04468.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium ulcerans Agy99] Length = 292 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 35/305 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T + +H P +A G +I RR Sbjct: 1 MPELPEVEVVRRGLQDHVVGKTMTAVRVHHPRAVRRHEAGPADLTARLLGARISGTDRRG 60 Query: 58 KYLLIELEGNL----------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 KYL + L+ +++VHLGMSG ++ P+ HV IS + Sbjct: 61 KYLWLTLDAGAPTTGRDDPDAALVVHLGMSGQMLLGGV--------PRAEHVRISAVLDD 112 Query: 108 NTKKYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 T + + D R FG DLV P+ L +P D F+ + K+ Sbjct: 113 GTV---LSFADQRTFGGWQLADLVSVDGSVVPAPVAHLARDPLDPLFDVDSVIKVLRGKH 169 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K LL+Q++V+GIGNIY EALWRAK+ R +L + L ++ V Sbjct: 170 SEVKRRLLDQQVVSGIGNIYADEALWRAKVHGARVAATLTRRQ------LGAVLDAAADV 223 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G GYF + YG+ GE C CG ++RR RS+FY Sbjct: 224 MREALAKGGTSFDSLYVNVNGQSGYFDRSLDAYGREGEHC-RRCGAVMRREKFMNRSSFY 282 Query: 284 CTYCQ 288 C CQ Sbjct: 283 CPRCQ 287 >gi|227504756|ref|ZP_03934805.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] gi|227198606|gb|EEI78654.1| formamidopyrimidine-DNA glycosylase [Corynebacterium striatum ATCC 6940] Length = 273 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 139/296 (46%), Gaps = 33/296 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + T + + G++I V+RR K++ Sbjct: 1 MPELPEVESVRRGLEGYLPGRTFERVEVLHPRANRGQEGPLDQLLVGREIGGVARRGKFM 60 Query: 61 LIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 IE G + VHLGMSG + T N +H + SL+ N Sbjct: 61 WIEFADENLHDPGRDVLFVHLGMSGQMRVGET-------NSKHVRIRASLSGGVN----- 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG+ L + + + P+P + F+ + + K + +K ALL+ Sbjct: 109 LSFIDQRTFGYWLLAP------WLKIAHIAPDPLEPDFDIVAAARRIRAKKTAVKTALLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALW A++ P +K +L Q + V+ A+ GG Sbjct: 163 QTVVSGIGNIYADEALWAAQVQPQKKASTLRQRDAIALID------AAASVMRAALKVGG 216 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF+ + YG+TG PC CG + R+V GRST +C CQ Sbjct: 217 TSFDALYVNVNGESGYFERSLHAYGRTGAPCD-RCGTELVRVVVGGRSTHFCPRCQ 271 >gi|89900446|ref|YP_522917.1| formamidopyrimidine-DNA glycosylase [Rhodoferax ferrireducens T118] gi|122479442|sp|Q21XW7|FPG_RHOFD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|89345183|gb|ABD69386.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rhodoferax ferrireducens T118] Length = 271 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 135/290 (46%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + V + + + LR+ G+ + V RR KYL Sbjct: 1 MPELPEVEVTRLSFAFEIAGARVISVRIGKP-LRWPLGCS-PTQLAGRSVQAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++VHLGMSGS H+H ++ T T DPR Sbjct: 59 LIDLDQGL-LLVHLGMSGSLSFARQLPPA----GAHDHFEMTTTLGTLRLT------DPR 107 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + + + L LG EP + F+ + ++ + +K LL V G Sbjct: 108 RFGAVVYAKGEDAPEAHKLLGKLGMEPLSDDFDVDRFHDELKRRRAAIKQVLLAGDTVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P L + +L I+ VL A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFMAGIRPTLSAARLSRPRS------ARLHAAIRDVLARAVATGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G+FQ VY + G+PC C I+ + Q RSTFYC +CQK Sbjct: 222 SSAKGENGHFQLEAMVYARQGQPC-RVCATPIKSLRQGQRSTFYCPHCQK 270 >gi|72383541|ref|YP_292896.1| formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] gi|90101309|sp|Q46H41|FPG_PROMT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|72003391|gb|AAZ59193.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL2A] Length = 282 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 27/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + I + R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIVSVKNSYLGSWERRGK 60 Query: 59 YLLI------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ + ++VHL M+G F + K + +H V + + Sbjct: 61 YLIGSLLTKEKFSKG-FLVVHLRMTGQFKL----LEKEVLACKHTRVRFF-----DERGR 110 Query: 113 RVIYNDPRRFGFMDLVETSL--KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V +S ++ LGPEP + FN+ YL KK ++K+A Sbjct: 111 ELRFIDIRNFGQMWHVPSSRSIPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSA 170 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ VAG+GNIY E L+ A ++P +++R+L L +L + K+L +I Sbjct: 171 LLDQETVAGVGNIYADETLFDAGINPKKESRNLKSTE------LKRLCNSLVKILNISIG 224 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 225 EGGTTFSDFRDLEGINGNYGGQAWVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|46199756|ref|YP_005423.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55981775|ref|YP_145072.1| formamidopyrimidine-DNA glycosylase [Thermus thermophilus HB8] gi|7531119|sp|O50606|FPG_THET8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81405496|sp|Q72HN2|FPG_THET2 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|2897751|dbj|BAA24892.1| mutM [Thermus thermophilus] gi|46197383|gb|AAS81796.1| formamidopyrimidine-DNA glycosylase mutM [Thermus thermophilus HB27] gi|55773188|dbj|BAD71629.1| MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg) [Thermus thermophilus HB8] Length = 267 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+L Sbjct: 1 MPELPEVETTRRRLRPLVLGQTLRQV-VHRDPARY----RNTALAEGRRILEVDRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG + ++ HLGM+G F +E T H + L T + ++DPR Sbjct: 56 LFALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLEGRT------LYFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V + P L LGPEP +F + LK LL+Q++ AG+ Sbjct: 101 RFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Sbjct: 161 GNIYADEALFRARLSPFRPARSLTEEEA------RRLYRALREVLAEAVELGGSTLSDQS 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 YRQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 263 >gi|218294712|ref|ZP_03495566.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] gi|218244620|gb|EED11144.1| formamidopyrimidine-DNA glycosylase [Thermus aquaticus Y51MC23] Length = 264 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 148/291 (50%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L+ +++ + ++ H+ LR+ + + V RR K+L Sbjct: 1 MPELPEVETTRRRLLPLLEGKRLLEVR-HQDPLRYRHTERARE----RAVEGVGRRGKFL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L G L ++VHLGM+G F +E T H L + + ++DPR Sbjct: 56 LLALSGGLEMVVHLGMTGGFRLEKTP---------HTRAEFLLEDGV------LHFHDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + +VE + P L LGPEP F + LK LL+Q + AG+ Sbjct: 101 RFGRIWVVERGAYGEIPLLARLGPEPLSPEFRPEAFLQGLRRSRKPLKALLLDQTLAAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL--RD 238 GNIY EAL+RA LSP R R + + +L Q +++VL +A+ GGS+L R Sbjct: 161 GNIYADEALFRAGLSPFRLGREVSEAEAL------RLFQALREVLAEAVALGGSTLSDRT 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG G FQ +VYG+ G PC CG I + V AGR T +C +CQ+ Sbjct: 215 YQQPDGLPGGFQKRHAVYGRAGLPC-PRCGAPIAKGVVAGRGTHHCPWCQR 264 >gi|158312992|ref|YP_001505500.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] gi|229541073|sp|A8L594|FPG_FRASN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|158108397|gb|ABW10594.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] Length = 291 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 90/300 (30%), Positives = 145/300 (48%), Gaps = 28/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ +H + +R HF+A+ G+ + RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRTVAEVEVHHLRAVRRHLAGADHFAASLVGQTVATARRRG 60 Query: 58 KYLLIELEG--------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 KYL + L +++ HLGMSG ++ + H V T+ Sbjct: 61 KYLWLGLTPSEPGGPAVGDALLGHLGMSGQLLVVPADSPDQV----HLRVRFRFTD---- 112 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + + D R FG + +V + P+ + P+P F+ ++ + LK Sbjct: 113 EGRELRFVDQRTFGGLAVVSGGAEL-PAPIAHIAPDPLSVDFDPERFADALRRRRTGLKR 171 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +++G+GNIY E LW A+L R T ++ + +L+ ++ V+ A+ Sbjct: 172 ALLDQTLISGVGNIYADEGLWAARLHYARPTETVTRAEAL------RLLDAVRTVMTAAL 225 Query: 230 DAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AGG+S R YV +G G F+ + VYG+ G+ C S C IRR RS+F C CQ Sbjct: 226 AAGGTSFDRLYVSTEGVSGLFERSLEVYGRGGQAC-SRCASTIRRDAFMNRSSFSCPACQ 284 >gi|73749072|ref|YP_308311.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|147669837|ref|YP_001214655.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. BAV1] gi|289433049|ref|YP_003462922.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] gi|73660788|emb|CAI83395.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. CBDB1] gi|146270785|gb|ABQ17777.1| DNA-(apurinic or apyrimidinic site) lyase [Dehalococcoides sp. BAV1] gi|288946769|gb|ADC74466.1| formamidopyrimidine-DNA glycosylase [Dehalococcoides sp. GT] Length = 270 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 136/288 (47%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ +M + + + F+A G + +SRR KY+ Sbjct: 1 MPELPEVETVKNEIMPHLLGKKIIRMEALWAKTLCPPEADFNALASGTCVTGLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L L I VHL MSG A+ + P+ L N +V + D R Sbjct: 61 IISLSSGLFISVHLKMSGGLT---AIRAENGQAPRFTRAIFHLENGE-----QVYFTDIR 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + L+ L LGPEP + +F A H+ + +K LL+QK++AG+ Sbjct: 113 KFGRITLLAG----LDSVLEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKVLAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y EAL++A L+P+R SL + +L IQ VL AI G+S+ Y Sbjct: 169 GNMYADEALFKACLNPLRSAESLSMAE------VERLHSAIQSVLHKAIQNKGASVSTYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DGS G Q F+V + GE C CG I R + R+ ++C CQ Sbjct: 223 RPDGSKGGAQLEFNVAHRRGESC-PVCGAPITRQLIRQRACYFCPRCQ 269 >gi|169348424|ref|ZP_02866362.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] gi|169293893|gb|EDS76026.1| hypothetical protein CLOSPI_00139 [Clostridium spiroforme DSM 1552] Length = 270 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + + D F + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDDIEEFKNKVCNQVINDIDRIGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ +++ + HL M G + + +H+H+ +L + + YND R Sbjct: 61 IFKLD-DVAFVSHLRMEGKYHYVNRDEPLN----KHDHIVFNLDDGKQLR-----YNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV PL LGPEP + L + HK N +K+ALL+Q I+AGI Sbjct: 111 KFGRMKLVSLDNYANELPLSKLGPEPFY--ADEKKLYEKLHKCNLPIKHALLDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + L P L K + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFAMGLDPYTPASKLT------KKSVKELIEVASSILNEAIKQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ V+ + + C S CG I + GR T+YC CQK Sbjct: 222 SANGIDGLFQVKLKVHLQ--KKC-SICGGEITKEAIKGRGTYYCKKCQK 267 >gi|115252785|emb|CAK98221.1| probable formamidopyrimidine-dna glycosylase protein [Spiroplasma citri] Length = 277 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 142/291 (48%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFD-FPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + T+TD + K +++ F +KI + R K Sbjct: 1 MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL L+ + +I HL M G + QH V L + ++++ Y+D Sbjct: 61 HLLFILD-DYVLISHLRMEGKYYFTSKDEPGEW---QHIMVLFELDH-----QFQLRYHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + Q PL LG EP D YL + + K+ +K LL Q ++ Sbjct: 112 TRKFGTMHLYSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQNVIV 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ +K+ P T++L+ + +I+ + VL AID GG+++ Sbjct: 172 GIGNIYANEILFASKIHPGEITKNLVDQD------YQNIIENTKLVLQKAIDEGGTTIAT 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G F V+G+ CL NC Q+I +I GR T++C YCQK Sbjct: 226 YHPEPGMDGKFLQQLKVHGRNKMECL-NCHQLIDKIFINGRGTYFCNYCQK 275 >gi|319935866|ref|ZP_08010292.1| DNA glycosylase [Coprobacillus sp. 29_1] gi|319809133|gb|EFW05614.1| DNA glycosylase [Coprobacillus sp. 29_1] Length = 270 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R+ L + + + I ++ + F + I D+ R KYL Sbjct: 1 MPELPEVETVRQTLRQFILDENIEGIDVYYDKIINGDTQEFIERLTHQTIRDIDRVGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ + + + HL M G + I + +H HV L + + + Y D R Sbjct: 61 IFLLDED-AFVSHLRMEGKYHIVK----RETPVDKHTHVVFHLHDGQDLR-----YIDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++LV+ L + PL LG EP D S L HK + +K ALL+Q I+ GI Sbjct: 111 KFGRLELVDRHLYREQLPLMKLGKEPFDIS--GEELYALLHKTSLPIKTALLDQSIMCGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + K+ P + L K +++L Q VL AI GG+++ + Sbjct: 169 GNIYANEICFLMKIDPRTRASRLS------KKRVHELKQISVDVLNRAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ +G+ PC C I++I+ R T+YC +CQK Sbjct: 222 DANGIHGLFQVQLKAHGQKICPC---CQGEIKKIMLNQRGTYYCPHCQK 267 >gi|222475256|ref|YP_002563672.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] gi|222419393|gb|ACM49416.1| formamidopyrimidine-DNA glycosylase (fpg) [Anaplasma marginale str. Florida] Length = 292 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 101/287 (35%), Positives = 145/287 (50%), Gaps = 22/287 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+I R V + ++R++LR F +A G+KI V R ++YL Sbjct: 14 MPELPEAEVISRFFASKAVGRHVEGVTVYRRDLRVRIADDFESAVVGRKIESVCRISRYL 73 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HLGMSG + +P +H+HV + L + V++NDPR Sbjct: 74 VFVLSRGERVMFHLGMSGRM-----AHVRPYVREKHDHVALLLDGG-----FHVVFNDPR 123 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + LV +GP+P FNA YL + +K+ L+N IVAGI Sbjct: 124 RFGAVLLVNFQAYENIA--SRIGPDPLSAEFNAEYL---MRPSKACVKSVLMNNAIVAGI 178 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+RA + P+R S+ +++E + L AI+ GGS++RDY Sbjct: 179 GNIYASEILFRAGVLPMRAMSSISYAE------CEGIVRETKATLQLAINTGGSTIRDYK 232 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ G FQ F VY + G+PC CG I + GRSTF+C C Sbjct: 233 IPTGAAGGFQQHFMVYQRAGQPCN-VCGARILSERRGGRSTFFCALC 278 >gi|124268417|ref|YP_001022421.1| formamidopyrimidine-DNA glycosylase [Methylibium petroleiphilum PM1] gi|124261192|gb|ABM96186.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Methylibium petroleiphilum PM1] Length = 279 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R +L+ ++ + + + + LR+ + G++++DV+RR KYL Sbjct: 1 MPELPEVEVTRLSLVDRLRGAEIAGVRVGKP-LRWPLGCA-PSTLVGRRLLDVNRRGKYL 58 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L + +++HLGMSGS + + +H ++ ++ Sbjct: 59 WFALGARPGVAADDGGLLLHLGMSGSLNLSTHAEP----PGPWDHFDLATSHG------L 108 Query: 114 VIYNDPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + DPRRFG L LG EP + F A L + + +K ALL Sbjct: 109 LRLTDPRRFGAAVWSSSRDEGAAGKLLAGLGVEPLEAGFTAALLHARLRGRRVAVKQALL 168 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 IV G+GNIY EAL+ A + P + +L+ ++ VL A+ G Sbjct: 169 AGDIVVGVGNIYASEALFLAGIDPRTPGHRISLAR------CERLVDAVRAVLARAVAVG 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+LRD+ G G FQN VYG+ GEPC + CG +RRIVQ RST++C +CQ+ Sbjct: 223 GSTLRDFRDAHGLGGAFQNEARVYGREGEPCTT-CGGTVRRIVQGQRSTYFCPHCQR 278 >gi|84498323|ref|ZP_00997120.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84381823|gb|EAP97706.1| formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 290 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 23/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + P + G I RR Sbjct: 1 MPELPEVEVVRRGLADHVVGRRIATAAFTGARVARRHVPGPIDLAERIVGLDITQARRRG 60 Query: 58 KYLLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL + L + +I HLGMSG ++E + +H H + + Sbjct: 61 KYLWLVLGHDGEPVHGLIAHLGMSGQLLVEAADAP----DEKHLHARFTFADGDP----E 112 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D R FG L + + +R + P+P + +++ + + + +S +K +L+ Sbjct: 113 LRFVDQRTFGGFALDDLADDGVPHQIRHIAPDPFELAYDQVAVVRRIKASDSAIKRMILH 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V+GIGNIY EALWRAK+ R + SL K ++ +++ ++V+ A+ GG Sbjct: 173 QGVVSGIGNIYADEALWRAKVHGERPSSSLT------KPVIARVLDHAREVMAAALIEGG 226 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G+ GYF + YG+ GEPC CG IRR RS+F C CQ Sbjct: 227 TSFDALYVNVNGASGYFDRSLHAYGQEGEPCA-RCGTPIRREHFMNRSSFSCPTCQ 281 >gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] Length = 281 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 28/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + + + + + F+A G+ I V RRAK Sbjct: 1 MPELPEVETIARALAPGLVGRVIVGVDVPDAKVLAGPKRRADFAAMAVGRTIQSVGRRAK 60 Query: 59 YLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 LL+ L +G + HL M+G F I P + + + L++ Sbjct: 61 LLLLTLGPRPQVPGDGPAVLAFHLKMTGRFHIAPPGAPDPDRA----RLLVRLSDGNT-- 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 +++ D RRFG ++ + +LGPEP D +K++ +K A Sbjct: 115 ---LVFADLRRFGTARVLTPEALSAWDFHASLGPEPWD--MTPQAFEEALGRKSTRIKAA 169 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY E+L+ A++ P + L +L++ +Q V+ AI Sbjct: 170 LLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQRQ------RLLKAVQNVIAAAIA 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AGGS++RDY DG G FQN F VYGK+G+PC C + AGR++ YC CQK Sbjct: 224 AGGSTIRDYRTPDGVEGGFQNHFQVYGKSGDPC-PACAAPLTHAKIAGRTSTYCRKCQK 281 >gi|313899426|ref|ZP_07832936.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] gi|312955714|gb|EFR37372.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. HGF2] Length = 276 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 93/291 (31%), Positives = 139/291 (47%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + + +T + N+ + F GK I R KY Sbjct: 1 MPELPEVETVVRTLEHQLDRVMITGCEVFWNNIIGYPDAAIFCRDIVGKTIQGYYRHGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + +L G++ I H+ M G F ++ +H HV + L++ + Y+D Sbjct: 61 MRFDL-GDMEWICHMRMEGKFYVQQPQEPYD----KHVHVILQLSDGRQLR-----YHDT 110 Query: 120 RRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L E YP + +G + D A ++ H HKK + LK LL+Q+ +A Sbjct: 111 RKFGKMYLYEKRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLDQRYIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + + P L + + +LI I+++L AI AGG+++R Sbjct: 171 GIGNIYADEICFAMHMHPETMINHLRKKD------FEELIYHIRRILNGAIRAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K GE C CG I++IV A R T +C CQ+ Sbjct: 225 YTSQLGVDGRFQLKLKVHAKKGEAC-PVCGTKIKKIVVATRGTCFCPTCQR 274 >gi|19553271|ref|NP_601273.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|161486717|ref|YP_226310.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|24211704|sp|Q8NNV7|FPG_CORGL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|21324843|dbj|BAB99466.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 286 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+ + + A G ++ RR Sbjct: 1 MPELPEVEVVRRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRG 60 Query: 58 KYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 K+L +EL +L ++VHLGMSG +I+ H + L N Sbjct: 61 KFLWLELIDAPSGETRPDLGLLVHLGMSGQMLIKEPDAPI----SPHLRAKVELDNGDE- 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 V + D R FG+ L L P + + + D S + + + S +K Sbjct: 116 ----VWFVDQRTFGYWWL--GDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSEIK 169 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LLNQ+IV+GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A Sbjct: 170 RLLLNQEIVSGIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKA 223 Query: 229 IDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GG+S YV+++G+ GYF + + Y +TGEPC CG +I R R + YC C Sbjct: 224 LAQGGTSFDALYVNVNGNSGYFALSLNAYAQTGEPCG-RCGTLIIRESFMNRGSHYCPNC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|296139285|ref|YP_003646528.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] gi|296027419|gb|ADG78189.1| formamidopyrimidine-DNA glycosylase [Tsukamurella paurometabola DSM 20162] Length = 286 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TVT + + H + R G ++ RR Sbjct: 1 MPELPEVEVVRRGLADHLVGRTVTAVEVLHPRAARRHVAGDADLIGQVTGAQVTSAERRG 60 Query: 58 KYLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K+L + L + +I+VHLGMSG ++ +H + L + + Sbjct: 61 KFLWLPLARAGRPADAAIVVHLGMSGQMLVGPGDD-------RHLRIRAGLDDGAVLR-- 111 Query: 113 RVIYNDPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D R FG LVE + + +P D F+ + + K++ +K Sbjct: 112 ---FVDQRTFGGWAVDPLVEVDGTLVPESVAHIARDPLDARFDRAAVIARMKAKDTEVKR 168 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +++G+GNIY EALW +++ R+ +L K L +L+ + +V+ A+ Sbjct: 169 VLLDQTVISGVGNIYADEALWLSRVHGRRRASALT------KPALGRLVDDATEVMRKAL 222 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D GG+S YV+++G GYF+ + + YG+ GEPC CG ++RR R + +C CQ Sbjct: 223 DQGGTSFDSLYVNVNGQSGYFERSLNAYGRDGEPC-RRCGTIMRREQFMNRGSHFCPTCQ 281 >gi|297181411|gb|ADI17600.1| formamidopyrimidine-DNA glycosylase [uncultured delta proteobacterium HF0130_19C20] Length = 272 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + R L + +++ + + + F G+K V+RRAKY Sbjct: 1 MPELPEVETVVRELSNEILGDSISSVDIFRNNPIVQGDLEAFQKQLIGRKFKYVTRRAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L + ++ H+ M+G FI+ C ++N V L + +I++D Sbjct: 61 LIFHLHPHGFMVAHMRMTGKFIV----CDPIDMPSKYNRVWFHLKSGR-----LMIFDDV 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG +++ E L LG EP N Y + +K+ LL+QKI+AG Sbjct: 112 RCFGTLEVYEN--LSDSKALNKLGIEPFSEDLNVNYFKSKVSSSKREIKSILLDQKIIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+R+K+SP+R + ++ + ++I+ Q VL +AI+ G+++ ++ Sbjct: 170 LGNIYVSEILFRSKISPLRTSETIRNKEWS------QIIKYTQSVLEEAIENNGTTISNF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +D G FQ VY KT +PC +CG I+RIVQ RSTF+C CQ+ Sbjct: 224 RRVDEKTGKFQKFLKVYDKTEKPC-PDCGIPIQRIVQQQRSTFFCPECQQ 272 >gi|289450873|ref|YP_003475024.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185420|gb|ADC91845.1| DNA-formamidopyrimidine glycosylase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 280 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 143/291 (49%), Gaps = 16/291 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRR+L + + +T + + P R K+ ++RR KYL Sbjct: 1 MPELPEVENIRRSLAPHLLDEYLTLKQPFHPQV-WINPGDLP--CRDVKVTAINRRGKYL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR-VIYNDP 119 L+ NL ++ HL M+G F + + H HV +++++ + + Y+DP Sbjct: 58 DFVLDSNLHLVAHLRMTGRFTYTEDLASPCLP---HTHVIFAVSHSVGLPAHAELRYSDP 114 Query: 120 RRFGFMDLVETSLKYQYPPL-RTLGPEPADNSFNAIYL-THQFHKKNSNLKNALLNQKIV 177 RRFG + L+ + Y +LG EP F YL T ++ +K+ LL+Q ++ Sbjct: 115 RRFGRLILLNDTELKSYKFGYNSLGAEPLSPDFTPAYLLTAASKHPHAKIKSFLLDQTVI 174 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY E L+ +L P S+ + +++ E ++L +I G++ R Sbjct: 175 AGLGNIYADEILYACRLHPCIPVGSISEA------AWEQVVNETIRLLSLSIANHGTTFR 228 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY DG G FQ+ VYG+ G+ C C ++ +GRST YC CQ Sbjct: 229 DYRDGDGKRGGFQSLLCVYGRAGQAC-PRCNGILATTRISGRSTVYCPQCQ 278 >gi|294631624|ref|ZP_06710184.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292834957|gb|EFF93306.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 289 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 19/290 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRAKYL 60 +PEVE++RR L + TV ++ + P F+ G ++ SRR KYL Sbjct: 1 MPEVEVVRRGLERWVAQRTVAEVAVLHPRAVRRHLAGPDDFARRLIGHRVGTPSRRGKYL 60 Query: 61 LIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + L + + +I+ HLGMSG +++ A +H + + + T+ + + D Sbjct: 61 WLPLADSDQAILAHLGMSGQLLVQPREAAA----EKHLRIRVRFADEDGTE---LRFVDQ 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + L ET + + +P D F+ +K + +K ALL+Q +++G Sbjct: 114 RTFGGLSLHETGPDGLPDVIAHIARDPLDPLFDDEAFHRALRRKRTTIKRALLDQSLISG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY EALWRA+L R T +L + +L+ ++ V+ +A+ GG+S Sbjct: 174 VGNIYADEALWRARLHYERPTATLTRPRT------AELLGHVRDVMNEALAVGGTSFDSL 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF + YG+ G PC C +RR RS+ YC CQ Sbjct: 228 YVNVNGESGYFDRSLDAYGREGLPC-RRCATPMRRRPWMNRSSHYCPKCQ 276 >gi|124025133|ref|YP_001014249.1| formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) [Prochlorococcus marinus str. NATL1A] gi|166198728|sp|A2C0H4|FPG_PROM1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|123960201|gb|ABM74984.1| Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) [Prochlorococcus marinus str. NATL1A] Length = 282 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 27/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R+ L ++ + + I + R F + + + RR K Sbjct: 1 MPELPEVETVRKGLEKLLNDFYIERIEVLKERSIASNGGSKSFIDNVKNSYLGNWERRGK 60 Query: 59 YLLI------ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 YL+ + ++VHL M+G F + K + +H V + Sbjct: 61 YLIGSLLTKEKFSKG-FLVVHLRMTGQFKL----LEKEVLACKHTRVRFF-----EERGR 110 Query: 113 RVIYNDPRRFGFMDLVE--TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + + D R FG M V S+ ++ LGPEP + FN+ YL KK ++K+A Sbjct: 111 ELRFIDIRNFGQMWHVPSSRSVPEIVSGIKRLGPEPFSDDFNSHYLEEYLKKKTRSIKSA 170 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ VAG+GNIY E L+ A ++P ++R+L N L +L + K+L +I Sbjct: 171 LLDQRTVAGVGNIYADETLFDAGINPKTESRNLKSNE------LKRLCNSLIKILNISIG 224 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++ D+ ++G G + VY ++G+ C CG+ I R GRST +C CQK Sbjct: 225 EGGTTFSDFRDLEGGNGNYGGQALVYRRSGKNC-KKCGEKILREKICGRSTHWCPNCQK 282 >gi|163840518|ref|YP_001624923.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162953994|gb|ABY23509.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 308 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 41/317 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L ++ T+ ++ + +R F A G +I VSRR Sbjct: 1 MPELPEVEVVRRGLQKLVVGRTIENVQVLDPRSIRRHLLGVEDFRAQLAGNRIGSVSRRG 60 Query: 58 KYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 K+L + L +++ HLGMSG +++ A + +H V I + + Sbjct: 61 KFLWLSLFYPADGHATGTALVTHLGMSGQMLMQDPEHA----DEKHLKVRIDFGPDDDLA 116 Query: 111 KYRVIYNDPRRFGFM---DLVET----------SLKYQYPPLRTLGPEPADNSFNAIYLT 157 K + + D R FG M +LV T + + +P D +F+ Sbjct: 117 K-ELRFVDQRIFGGMFVSELVPTADGLPGGLGDDQPWIAAEAAHIAKDPLDPNFSLSDFA 175 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q ++G+GNIY E+LW + L L L +L Sbjct: 176 NLLKGSKIGIKRVLLDQARISGVGNIYADESLWASSLHYATPAGQLSFTQ------LDEL 229 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMI 271 I+ ++KV+ ++ GG++ YV+++G+ GYF+ + +VYG+ +PC C +I Sbjct: 230 IRNVRKVMEASLAVGGTTFDSLYVNVNGASGYFERSLNVYGRENKPCY-RCQDNGLLTLI 288 Query: 272 RRIVQAGRSTFYCTYCQ 288 RR RS++ C CQ Sbjct: 289 RRAPFMNRSSYLCPVCQ 305 >gi|297170281|gb|ADI21318.1| formamidopyrimidine-DNA glycosylase [uncultured gamma proteobacterium HF0010_09F21] Length = 269 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + +KN + I + +LR KKII+V R+ KY+ Sbjct: 1 MPELPEVETTKRGVEPFLKNKIIKRIEVRNSSLRVPVNKTKLKKIINKKIIEVGRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L II+HLGMSG+ + + + +H+HV + L + +I+ND R Sbjct: 61 FLQLNDESKIIIHLGMSGTLRVHNK-----FQKLKHDHVILELETGQS-----LIFNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG LV + + + GP+P + Y ++ S LK LLN KI++GI Sbjct: 111 RFGLFHLVLKNEE--FSMFENNGPDPLSQK-DGKYFYNKIKNSRSTLKALLLNNKIISGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+ ++LSP ++ + K ++I+ + VL AI GG++L DY Sbjct: 168 GNIYASEILFLSRLSPKKRGNKVT------KIQCDEIIKFSKIVLNRAIKFGGTTLNDYH 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + GYF+ +VY + GE C C I +I Q RST++C CQ Sbjct: 222 NAENKPGYFKIKLNVYDREGEECKE-CKSKIFQIRQNNRSTYFCKNCQ 268 >gi|15610061|ref|NP_217440.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15842470|ref|NP_337507.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31794101|ref|NP_856594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638806|ref|YP_979030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662769|ref|YP_001284292.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148824114|ref|YP_001288868.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969553|ref|ZP_02551830.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404900|ref|ZP_03417081.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412767|ref|ZP_03421479.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215428369|ref|ZP_03426288.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431872|ref|ZP_03429791.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215447188|ref|ZP_03433940.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754677|ref|ZP_03533473.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558948|ref|ZP_03538024.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|224991298|ref|YP_002645987.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254233015|ref|ZP_04926342.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|254551998|ref|ZP_05142445.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187944|ref|ZP_05765418.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260202060|ref|ZP_05769551.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260206244|ref|ZP_05773735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289444480|ref|ZP_06434224.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448590|ref|ZP_06438334.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289571112|ref|ZP_06451339.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289575630|ref|ZP_06455857.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289746724|ref|ZP_06506102.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289751593|ref|ZP_06510971.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289755038|ref|ZP_06514416.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289759047|ref|ZP_06518425.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289763101|ref|ZP_06522479.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|298526394|ref|ZP_07013803.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|306781123|ref|ZP_07419460.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|306785761|ref|ZP_07424083.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|306789801|ref|ZP_07428123.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|306794614|ref|ZP_07432916.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|306798858|ref|ZP_07437160.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|306804703|ref|ZP_07441371.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|306808896|ref|ZP_07445564.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|306968995|ref|ZP_07481656.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|307085636|ref|ZP_07494749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|54037118|sp|P64151|FPG_MYCBO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|54040772|sp|P64150|FPG_MYCTU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215634|sp|A1KMR9|FPG_MYCBP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166215638|sp|A5U6T0|FPG_MYCTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|254789445|sp|C1AG40|FPG_MYCBT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3261604|emb|CAA98987.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|13882775|gb|AAK47321.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619696|emb|CAD96636.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE FPG (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121494454|emb|CAL72935.1| Probable formamidopyrimidine-dna glycosylase fpg [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124602074|gb|EAY61084.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis C] gi|148506921|gb|ABQ74730.1| formamidopyrimidine-DNA glycosylase Fpg [Mycobacterium tuberculosis H37Ra] gi|148722641|gb|ABR07266.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis F11] gi|224774413|dbj|BAH27219.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289417399|gb|EFD14639.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421548|gb|EFD18749.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CPHL_A] gi|289540061|gb|EFD44639.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis K85] gi|289544866|gb|EFD48514.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T17] gi|289687252|gb|EFD54740.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis 02_1987] gi|289692180|gb|EFD59609.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis T92] gi|289695625|gb|EFD63054.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|289710607|gb|EFD74623.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis GM 1503] gi|289714611|gb|EFD78623.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298496188|gb|EFI31482.1| formamidopyrimidine-DNA glycosylase lyase mutM [Mycobacterium tuberculosis 94_M4241A] gi|308326063|gb|EFP14914.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu002] gi|308329541|gb|EFP18392.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu003] gi|308333734|gb|EFP22585.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu004] gi|308337091|gb|EFP25942.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu005] gi|308340903|gb|EFP29754.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu006] gi|308344740|gb|EFP33591.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu007] gi|308348720|gb|EFP37571.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu008] gi|308353416|gb|EFP42267.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu009] gi|308364863|gb|EFP53714.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu012] gi|323718536|gb|EGB27707.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis CDC1551A] gi|326904539|gb|EGE51472.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis W-148] Length = 289 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|213855126|ref|ZP_03383366.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 250 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 88/254 (34%), Positives = 132/254 (51%), Gaps = 19/254 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D++ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFL 221 Query: 241 HIDGSIGYFQNAFS 254 DG GYF + Sbjct: 222 QSDGKPGYFARSCR 235 >gi|306777215|ref|ZP_07415552.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|306973332|ref|ZP_07485993.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|307081038|ref|ZP_07490208.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] gi|308214424|gb|EFO73823.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu001] gi|308357235|gb|EFP46086.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu010] gi|308361244|gb|EFP50095.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis SUMu011] Length = 289 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 148/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L M T+T++ +H P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHMTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|253797987|ref|YP_003030988.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289553286|ref|ZP_06442496.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] gi|297635544|ref|ZP_06953324.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732543|ref|ZP_06961661.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659875|ref|ZP_07816755.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319490|gb|ACT24093.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 1435] gi|289437918|gb|EFD20411.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 605] Length = 289 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H P +A RG +I RR Sbjct: 1 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 60 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 61 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 112 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 113 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 169 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 170 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 223 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 224 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 282 Query: 287 CQ 288 CQ Sbjct: 283 CQ 284 >gi|332285378|ref|YP_004417289.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] gi|330429331|gb|AEC20665.1| formamidopyrimidine-DNA glycosylase [Pusillimonas sp. T7-7] Length = 258 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 21/275 (7%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M + + ++ +R+ P +A G K++ RR KYLLI E I+HLGMS Sbjct: 1 MTGKQLKNFVVYEPRMRWPIPDGLAATISGHKVLSCERRGKYLLINFEHGTQ-IIHLGMS 59 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET--SLKYQ 135 GS S A+ +H+H + R + +DPRRFG + + Sbjct: 60 GSLRRVPASEAR----RKHDHAEWIFDDA------RFLLHDPRRFGAVLWHDAAQGPVAN 109 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +P L LG EP D F + YL + + +K LL IV G+GNIY E+L+ A+++ Sbjct: 110 HPLLAKLGIEPFDAQFTSSYLYERLRGRTQAIKQTLLAGDIVVGVGNIYASESLFLARIN 169 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAFS 254 P SL + L+Q IQ L +A+++GGS+LRDYV+ G G YF + Sbjct: 170 PRTAAGSLSRAR------CQALMQAIQITLRNALESGGSTLRDYVNATGEPGAYFALHSA 223 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY K+G+PC C I+RI+Q R+T+YC CQ+ Sbjct: 224 VYEKSGQPCQL-CATPIKRIIQGQRATYYCPKCQR 257 >gi|50365398|ref|YP_053823.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] gi|50363954|gb|AAT75939.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] Length = 275 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N T+ + + + + F + +KI+ VS KY Sbjct: 1 MPELPEVRTVAVFLNKRIVNTTILKAECFFEKMIWRNEVKDFYKSVLNQKILKVSNYGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ EL N II HL M G + I I N H + L+N K Y D Sbjct: 61 LMFELS-NQIIISHLRMEGKWSISKKEID--IYNANHLRLQFELSNGEYLK-----YYDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG +++ + Q + LGPEP ++ + YL + K NS +K +L+Q ++ G Sbjct: 113 RKFGTIEIWDKKNYKQKSGMDKLGPEPLNSQPSFEYLKEKAIKSNSLIKAFILDQSVLCG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A ++P R T++L L K+I +L AI G+S+ Y Sbjct: 173 IGNIYANEILFAAGINPERITKTLTDEE------LKKIIMFSNAILEKAISLKGTSIHSY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ+ V+ + E C CG I + AGR T++C CQ Sbjct: 227 KSGDGETGQFQHELKVHLRKDEKCF-VCGTKILKKQVAGRGTYFCAKCQ 274 >gi|256832888|ref|YP_003161615.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] gi|256686419|gb|ACV09312.1| formamidopyrimidine-DNA glycosylase [Jonesia denitrificans DSM 20603] Length = 309 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 35/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + VT + + R+ PH FSA G+ + +RR Sbjct: 1 MPELPEVETVRDGLARHVLGHQVTGVEVFREYSVRRHEGGPHDFSARLSGRVMRGWARRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL-TNNTNTKKYRVI 115 K+L E + ++ HLGMSG +I+ A+ P+H HV + L T+ + ++ V Sbjct: 61 KFLWCEFDEPGEVLVAHLGMSGQLLIKEAQDAE----PRHPHVRVRLWTHTADGREGVVD 116 Query: 116 YNDPRRFGFMDLVET------------SLKYQYPPLR-TLGPEPADN-----SFNAIYLT 157 + D R FG++ L T S + P L + + D S L Sbjct: 117 FVDQRTFGYLALSPTVATADARPGGRGSERAVVPSLAEHIARDLLDPVLAVGSVQWEALL 176 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + +K LL+Q +++G+GNIY E LWRA++ ++ + +L Sbjct: 177 DRCVGSKVAVKRLLLDQSVMSGVGNIYADEGLWRARIHGESAANAVTRT------AWRRL 230 Query: 218 IQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + + +V+ +A+ GG+S D YV+++G GYF + +VYG+ GEPC C IRR Sbjct: 231 LTHLGEVMGEALVQGGTSFDDLYVNVNGQSGYFDRSLNVYGREGEPC-RRCATPIRRSAF 289 Query: 277 AGRSTFYCTYCQK 289 RS+F+C CQ+ Sbjct: 290 MNRSSFWCPRCQR 302 >gi|282857884|ref|ZP_06267090.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] gi|282584266|gb|EFB89628.1| DNA-formamidopyrimidine glycosylase [Pyramidobacter piscolens W5455] Length = 294 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE+++ ++ + + L R+++ P F G+ + + RR K+ Sbjct: 1 MPELPEVEMVKNVTAPQIRGRRIEKVALERRDVIAHPAPDDFVELVTGRAVTGMGRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L L+ +++HL M+G ++ +H SL+ + ++ + D Sbjct: 61 LRFFLDDGAEMVLHLRMTGRLLVVPPE----FPAEKHTRAVFSLS-----GRLQLRFADL 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L++ K + LGPEP D +++L + +K LL+Q++VAG Sbjct: 112 RRFGRFWLLQKGEK-DCTGMDKLGPEPFDAGLTSVWLKERLGASRRAVKTCLLDQRVVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A++ P R SL + +L + I++V+ ++ S ++ Sbjct: 171 IGNIYGDEILFAARIRPTRAASSLSRPE------WERLTRAIREVMRFHVEQIDVSAEEF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ VYG+ G+PC CG ++R V GRS+ +C CQK Sbjct: 225 LRGRGTEYRNTPLLKVYGRDGDPC-PVCGATLQRAVVGGRSSVFCPRCQK 273 >gi|256831105|ref|YP_003159833.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] gi|256580281|gb|ACU91417.1| formamidopyrimidine-DNA glycosylase [Desulfomicrobium baculatum DSM 4028] Length = 270 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 149/290 (51%), Gaps = 23/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I R L +++ + ++ LR P G+ I VSRRAK Sbjct: 1 MPELPEVETIARGLHTLVQGRRIREVLHFTPSVLRAGNPGS----LPGRTITYVSRRAKL 56 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ L+ + HL M+G + P+H H+ L R+I+ D Sbjct: 57 LLVHLDQGECLAFHLKMTGRVWVASPGQDL----PKHTHLVCELEGRD-----RLIFEDT 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFGF + + + LGPEP + A L + + + +K+ LLNQ ++AG Sbjct: 108 RRFGFFGIYGPQDIEAWSFYQNLGPEPLQS--TAEDLALRLGARRAGVKSLLLNQTVLAG 165 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E+L+ A++ P ++ P +L E+Q++L++AI AGGS++ DY Sbjct: 166 IGNIYADESLFAARIHPASLAANI------PLAKRVQLCSELQRILLEAIAAGGSTISDY 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ++F VYGK G+PC CG+ ++ AGR++ +C CQK Sbjct: 220 RNAYGKSGIFQDSFEVYGKKGQPC-PACGRALKAEQIAGRTSTHCPRCQK 268 >gi|72161056|ref|YP_288713.1| formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] gi|90101321|sp|Q47S77|FPG_THEFY RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|71914788|gb|AAZ54690.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Thermobifida fusca YX] Length = 296 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 149/299 (49%), Gaps = 22/299 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFP--HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + ++ + H + +R P F+A G + + RR Sbjct: 1 MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT---KKYRV 114 KYL + L+ +++ HLGMSG +++ A +H V + LT + Sbjct: 61 KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAA----ERHLRVRLPLTARQGHDPEAPQEL 116 Query: 115 IYNDPRRFGF---MDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D R FG LV+ P + + +P D +F+ +K + LK A Sbjct: 117 RFVDQRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTELKRA 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +++GIGNIY EALW ++L T +L ++ + L+ +++V++ A+ Sbjct: 177 LLDQSLISGIGNIYADEALWMSQLHWATPTEALSRSQ------VATLLAAVREVMVAALA 230 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV+++G GYF + + YG+ +PC CG I+R RS++ C CQ Sbjct: 231 QGGTSFDSLYVNVNGESGYFARSLNAYGRNDQPCA-RCGTPIQRETFMNRSSYSCPRCQ 288 >gi|224476780|ref|YP_002634386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] gi|222421387|emb|CAL28201.1| formamidopyrimidine-DNA glycosylase [Staphylococcus carnosus subsp. carnosus TM300] Length = 290 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 99/307 (32%), Positives = 147/307 (47%), Gaps = 35/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + ++ N + ++ ++ F + G K Sbjct: 1 MPELPEVEHVKRGIEPLVLNQRIEEVEFSNAVINGKEIGKDTIIKQIDLPMFKLYSEGYK 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+L + + ++ HLGMSG F + T + N +H HV L+N Sbjct: 61 ITRVERRSKYILFHIETNDDQRVLVSHLGMSGGFFVVDTLDDIIVPNYKKHWHVNFKLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-- 163 ++IY+D RRFG ++ + + + PEP D + + HQ K Sbjct: 121 GK-----QLIYSDIRRFG--EIKNVADLSAHSSFSDMAPEPFDENA-FAHFKHQLETKTY 172 Query: 164 -NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K +L+ K++AG GNIY CEAL+ AK++P R SL + ++ E+ Sbjct: 173 HKKPIKQVILDHKVIAGCGNIYACEALFNAKINPERSADSLNDDEQ------KRVFDEVV 226 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 KVL I+ GG+S+ Y H DG G QN VY K P CG I+ V AGR+T Sbjct: 227 KVLRLGIENGGTSISSYRHADGKTGQMQNYLQVYKKKVCP---VCGGPIQTKVIAGRNTH 283 Query: 283 YCTYCQK 289 YC CQK Sbjct: 284 YCPQCQK 290 >gi|46446526|ref|YP_007891.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] gi|81697648|sp|Q6MCT3|FPG_PARUW RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46400167|emb|CAF23616.1| putative formamidopyrimidine-DNA glycosidase [Candidatus Protochlamydia amoebophila UWE25] Length = 276 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 137/295 (46%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV I ++L + + + L P F +G+ I +V RR K Sbjct: 1 MPELPEVHTIVQDLKQSRLIGKKIISTEIFWPKTLAVPTPEIFCQQVQGQSIQNVDRRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 Y++ +L + +IVHL M+G F + + P +V I + + ++D Sbjct: 61 YIIFQLSNQMFLIVHLRMTGRFQFVTS------QTPASPYVRIQFNFENGDQ---LRFHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG LV + + LGPEP +SF + + LK+ LL+Q + Sbjct: 112 TRKFGRWYLVSDVEE----IIGHLGPEPLLSSFTFELFEDMMKNRKTLLKSLLLDQSFIV 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV EALW AKL P+ + L L I+ VL I A G++L Sbjct: 168 GLGNIYVDEALWEAKLHPLIPANQINLK------HLKILYHSIKYVLEKGIQARGTTLGP 221 Query: 239 ----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y +DGS G Q +V+ KTG PC CG +I +++ A RST C CQK Sbjct: 222 GRTHYYRLDGSKGEHQTLLNVFRKTGHPC-PRCGHLIEKLIVAQRSTHICPICQK 275 >gi|317506413|ref|ZP_07964218.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] gi|316255293|gb|EFV14558.1| formamidopyrimidine-DNA glycosylase [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 92/296 (31%), Positives = 142/296 (47%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG---KKIIDVSRRA 57 MPELPEVE++RR L + + + + P + + ++ V RR Sbjct: 1 MPELPEVEVVRRGLAEELAGARLRQVRVLHPRAARRHPGGGALLAAALAGRDVLAVCRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L+G S+++HLGMSG F I NP H + L + + + Sbjct: 61 KYLWLVLDGEDSVVMHLGMSGQFRIGEEGMP---GNPNHLRIEADLADGRTLQ-----FF 112 Query: 118 DPRRFGFMD---LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + L E + P+ + +P D F+ + + K S +K LL+Q Sbjct: 113 DQRTFGGWEFAPLKEVDGELVPVPVAHIARDPFDPKFDPVQAARRIRAKRSAIKRVLLDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY E+LWRA+L R L Q L+ E+ V+ ++I GG+ Sbjct: 173 TVLSGVGNIYADESLWRARLHGERPAAELGQRKAV------ALLGEVASVVHESITEGGT 226 Query: 235 SLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S YV+++G G F + +VYG+ G+PC CG IRR RS+ +C CQK Sbjct: 227 SFDSLYVNVNGESGQFSDWLAVYGQEGKPC-RRCGAAIRREAFMNRSSHFCPKCQK 281 >gi|328465599|gb|EGF36828.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Listeria monocytogenes 1816] Length = 229 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 130/245 (53%), Gaps = 17/245 (6%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G++I V RR K+LL +L N +I+ HL M G F + + + +H H+ Sbjct: 2 LVGQEIEGVRRRGKFLLFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFE 56 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 ++T + + D R+FG M++ + + ++ LGPEP +F + K + Sbjct: 57 DHTELR-----FLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTS 111 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K ALL+QK+VAG+GNIY E + AK+ P R SL + ++ + + + Sbjct: 112 RAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSI 165 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + +A+ GGS++R YV+ G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C Sbjct: 166 MTEAVALGGSTVRTYVNSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFC 224 Query: 285 TYCQK 289 CQK Sbjct: 225 PNCQK 229 >gi|289672463|ref|ZP_06493353.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. syringae FF5] Length = 243 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 19/261 (7%) Query: 29 HRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA 88 LR+ P G++I+ V RRAKYLLI E ++I HLGMSG+ + Sbjct: 2 RDSRLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIRAEVG-TLISHLGMSGNLRLVEAGLP 60 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD 148 +H HV I L + + Y DPRRFG M + + + L LGPEP Sbjct: 61 AL----KHEHVDIELESG-----LALRYTDPRRFGAMLW--SLDPHNHELLIRLGPEPLT 109 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 + F+ L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 110 DLFDGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRAR- 168 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG Sbjct: 169 -----YLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCG 222 Query: 269 QMIRRIVQAGRSTFYCTYCQK 289 +R + R++ YC CQ+ Sbjct: 223 TTLREVKLGQRASVYCPKCQR 243 >gi|330980019|gb|EGH78285.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 240 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 134/259 (51%), Gaps = 19/259 (7%) Query: 31 KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 LR+ P G++I+ V RRAKYLLI+ E ++I HLGMSG+ + Sbjct: 1 SRLRWPIPEDLDVRLSGQRIVQVDRRAKYLLIQAEVG-TLISHLGMSGNLRLVEAGLPAL 59 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 +H HV I L + + Y DPRRFG M + + + L LGPEP + Sbjct: 60 ----KHEHVDIELESG-----LALRYTDPRRFGAMLW--SLDPHNHELLIRLGPEPLTDL 108 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ L + K+ +K +++ +V G+GNIY EAL+ A + P R+ S+ + Sbjct: 109 FDGQRLYERSRGKSIAVKPFVMDNAVVVGVGNIYATEALFAAGIDPRREAGSVSRAR--- 165 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 KL EI+++L AI+ GG++LRD++ DG GYFQ YG+ G+PC CG Sbjct: 166 ---YLKLAIEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTT 221 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R + R++ YC CQ+ Sbjct: 222 LREVKLGQRASVYCPKCQR 240 >gi|94970892|ref|YP_592940.1| formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94552942|gb|ABF42866.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 272 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + L T+ + + K + G KI V R K+ Sbjct: 1 MPELPEVETVANGLNKRAAGTTIESVWIGEKKQPLKSSARAIAKMLEGAKITLVRRVGKH 60 Query: 60 LLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ +L E I+HLGM+GS ++ P+H H+ L++ + Sbjct: 61 IVADLAEPDGEPRGQWIIHLGMTGSTLVVDPDTPL----PKHTHLIAKLSSGKELR---- 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + DPR FG + + S + P G EP + + F +N+ +K+ALLNQ Sbjct: 113 -FVDPRMFGKLAVRAKSDVFAAP-----GLEPL--TVSLEDFQKLFRGRNTPIKSALLNQ 164 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++G+GNIY EAL+RA + P R+ +SL + + L +L +++ +VL +A++ GGS Sbjct: 165 ALLSGVGNIYADEALFRAGIRPRRRAKSLSRAD------LTRLHEKVGEVLREAVELGGS 218 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+ DYV +G+ G+FQ +VY +TGEPC + C + I+R+V AGRS+ YC CQK Sbjct: 219 SVNDYVDAEGNEGFFQLRHNVYQRTGEPCFT-CKKPIKRVVIAGRSSHYCQNCQK 272 >gi|226356606|ref|YP_002786346.1| formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] gi|226318596|gb|ACO46592.1| putative formamidopyrimidine-DNA glycosylase [Deinococcus deserti VCD115] Length = 276 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 41/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++K + + H R+ + G+++ +SRR KYL Sbjct: 1 MPELPEVETTRRKIEPLLKGRVIQRVE-HDSPHRYRD----THLAEGRRVRGLSRRGKYL 55 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 +++L +L +IVHLGM+G F +E +H VT+S T Sbjct: 56 MLQLVAADAADEDPHDLELIVHLGMTGGFRLE---------GGKHTRVTLSTDGGT---- 102 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + ++D RRFG M +V P L +GPEP F + +K L Sbjct: 103 --LHFDDSRRFGKMAVVRPGEYKTMPTLAGMGPEPLSEDFREQEFVKA-AAQCGAVKPWL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A++ P + D +L Q I++V+ A++A Sbjct: 160 LSQKPVSGVGNIYADESLWMARIHPAQT--------RLKADEARRLYQAIREVMTAAVEA 211 Query: 232 GGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GGS+L D Y DG G FQ + Y + G+PC CG I +IV R T +C CQK Sbjct: 212 GGSTLSDGTYQQHDGVSGLFQFSHRAYAREGQPC-ERCGTSIEKIVLGQRGTHFCPQCQK 270 >gi|13096238|pdb|1EE8|A Chain A, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 gi|13096239|pdb|1EE8|B Chain B, Crystal Structure Of Mutm (Fpg) Protein From Thermus Thermophilus Hb8 Length = 266 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 29/289 (10%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR L ++ T+ + +HR R+ +A G++I++V RR K+LL Sbjct: 1 PELPEVETTRRRLRPLVLGQTLRQV-VHRDPARY----RNTALAEGRRILEVDRRGKFLL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 LEG + ++ HLGM+G F +E T H + L T + ++DPRR Sbjct: 56 FALEGGVELVAHLGMTGGFRLEPTP---------HTRAALVLEGRT------LYFHDPRR 100 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 FG + V + P L LGPEP +F + LK LL+Q++ AG+G Sbjct: 101 FGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVG 160 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD--Y 239 NIY EAL+RA+LSP R RSL + +L + +++VL +A++ GGS+L D Y Sbjct: 161 NIYADEALFRARLSPFRPARSLTEEEA------RRLYRALREVLAEAVELGGSTLSDQSY 214 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G FQ +VYG+ G PC CG+ + R V AGR T +C CQ Sbjct: 215 RQPDGLPGGFQTRHAVYGREGLPC-PACGRPVERRVVAGRGTHFCPTCQ 262 >gi|317151855|ref|YP_004119903.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] gi|316942106|gb|ADU61157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio aespoeensis Aspo-2] Length = 272 Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 92/288 (31%), Positives = 138/288 (47%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I R L V+ + + + +A G ++ VSRRAK L Sbjct: 1 MPELPEVEVIARGLHAVLVGRVIAAVEPVDPTRLSEDGAALAAKVVGAGVVRVSRRAKVL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L ++ HL M+G + +H+ L + + + + D R Sbjct: 61 LIGLGNGATLAFHLKMTGRVV-----HGPMRPVERHDRTRFILDDGS-----LLCFADMR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG++ + L +GPEP D L + ++ +K LL+Q +VAG+ Sbjct: 111 RFGYVRAFAPGGLETWDFLCRVGPEPLDTP--PAALAGRVLSRSGRIKALLLDQAVVAGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L RA + P + L + +L +Q VL AI GSS+RDYV Sbjct: 169 GNIYADESLHRAGIHPQTRGNRLGRAGA------ERLFAHLQDVLRQAIAENGSSIRDYV 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQN+F+VYG+ G PC CG ++ + AGR++ +C CQ Sbjct: 223 NASGDAGAFQNSFAVYGRKGSPCA-VCGAILFAVKVAGRTSTFCPRCQ 269 >gi|86742281|ref|YP_482681.1| formamidopyrimidine-DNA glycosylase [Frankia sp. CcI3] gi|86569143|gb|ABD12952.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. CcI3] Length = 323 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 59/331 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + +H FSA G++I RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIASVDVHHPRAVRRHLAGAADFSALLVGRRITAARRRG 60 Query: 58 KYLLIEL---------------------------------------EGNLSIIVHLGMSG 78 KYL + L ++I HLGMSG Sbjct: 61 KYLWLVLQPPVDHAACAPVVPEEPPEEESAAVLAEMSPPALPPGHPAQGDALIAHLGMSG 120 Query: 79 SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP 138 ++ + + +H + T+ + + D R FG V T P Sbjct: 121 QLLVVPPATP----DQKHLRIRFVFTDG----GRELRFVDQRTFG-GLAVATGEADLPAP 171 Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + + +P D +F+ +T + ++ + +K ALL+Q +V+G+GNIY EALW AKL R Sbjct: 172 VAHIARDPLDPAFDERLVTERMRRRRTGVKRALLDQTLVSGVGNIYADEALWAAKLHYAR 231 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYG 257 T +L + + +L+ ++ V+I A++ GG+S R YV DG G F+ + VYG Sbjct: 232 PTETLTRAE------VGRLLGCVRTVMIAALEVGGTSFDRLYVSADGVSGLFERSLQVYG 285 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G PC + CG +RR RS+F C CQ Sbjct: 286 RAGRPC-TRCGDAVRRDAFMNRSSFTCPTCQ 315 >gi|260219875|emb|CBA26844.1| Formamidopyrimidine-DNA glycosylase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 271 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + T+ + + + LR+ A G ++ V RR KYL Sbjct: 1 MPELPEVEVTRRSFADRITGATIQGVRMGKP-LRWPLQCE-PAQLAGLRVRGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L L ++VHLGMSGS I + + H+H + T + +DPR Sbjct: 59 LIDLSDGL-LLVHLGMSGSVIFDRHLPPAGV----HDHFDMVTDLGT------LRLHDPR 107 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP + F+ ++ + +K LL ++V G Sbjct: 108 RFGAVVFAAGESDPVAQKLLGHLGVEPLGDGFDPAAFLAGLRQRKAPIKQVLLAGEVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P S+ K + KL ++ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTSPANSIS------KPRVAKLHAAVKDVLSRAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + +G GYFQ +VYG+ G PC C +R I Q RST+YC CQK Sbjct: 222 SNANGESGYFQLEANVYGREGAPC-RVCATPVRAIRQGQRSTYYCMVCQK 270 >gi|171060164|ref|YP_001792513.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] gi|238689107|sp|B1Y3P5|FPG_LEPCP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|170777609|gb|ACB35748.1| formamidopyrimidine-DNA glycosylase [Leptothrix cholodnii SP-6] Length = 276 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 145/294 (49%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R L+ + TV + L + LR+ G++I +++RR KY+ Sbjct: 1 MPELPEVEVTRLGLVDRIGGATVRALQLGKP-LRWPI-GVAPQQLAGQRIGELARRGKYI 58 Query: 61 LIELEGNLS----IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + L+ + ++ HLGMSGS E A+ H+HV + + + Sbjct: 59 WMPLQDGSTPAGGLLWHLGMSGSLRFE----AQLPPPGPHDHVELVTDRGS------LRL 108 Query: 117 NDPRRFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 DPRRFG + + L LG EP ++ F A L + +K ALL Sbjct: 109 TDPRRFGAVVWSPSLQAGCAARLLGGLGVEPLEDGFTASVLHQGLRGRRVAIKQALLAGD 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 IV G+GNIY EAL+ A + P + L +L+Q I++VL A+ AGGS+ Sbjct: 169 IVVGVGNIYCSEALFVAGIDPRLAAQRLSLAR------CERLVQAIRQVLRQALMAGGST 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 LRD+ G G FQ VY + +PC CG ++RRIVQ R+T++C CQ+ Sbjct: 223 LRDFRDAHGMGGAFQLQAQVYDRADQPC-RRCGALVRRIVQGQRATYFCPVCQR 275 >gi|288923599|ref|ZP_06417709.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] gi|288345061|gb|EFC79480.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EUN1f] Length = 306 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 44/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + ++ P F+AA G+ + SRR Sbjct: 1 MPELPEVEVVRRGLERGVVGRVIDGVEVYHPRAVRRHAAGPDDFAAALLGRTVTTASRRG 60 Query: 58 KYLLIELEGNLS-----------------------IIVHLGMSGSFIIEHTSCAKPIKNP 94 KYL + L + ++ HLGMSG ++ + Sbjct: 61 KYLWLGLSPQGAEAAGLEAVGAAAAGAGAAGAGESLLGHLGMSGQLLVVPPDSPDQV--- 117 Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H V + + + D R FG + +V + + + P+P F+ Sbjct: 118 -HLRVRFRFGDG----GRELRFVDQRTFGGLAVVSGADLPA--SIAHIAPDPLAADFDVE 170 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + ++ + LK ALL+Q +++G+GNIY EALW A+L R T ++ + Sbjct: 171 HFVDALRRRRTGLKRALLDQTLISGVGNIYADEALWAARLHYARPTETVSRAEA------ 224 Query: 215 YKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 ++L++ + V+ A+ AGG+S R YV +G G F+ + VYG+ GE C S C IRR Sbjct: 225 HRLLEAARTVMTAALAAGGTSFDRLYVSTEGVSGLFERSLEVYGREGEQC-SRCAAPIRR 283 Query: 274 IVQAGRSTFYCTYCQ 288 RS++ C CQ Sbjct: 284 EAFMNRSSYTCPVCQ 298 >gi|284032687|ref|YP_003382618.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] gi|283811980|gb|ADB33819.1| formamidopyrimidine-DNA glycosylase [Kribbella flavida DSM 17836] Length = 284 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 20/292 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+ + + H + +R P F+A+ +G+ +RR Sbjct: 1 MPELPEVEVVRRGLADFTTGRTIDAVEVLHPRPVRRHLAGPDDFAASLKGQTFAAPARRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL + L +++ HLGMSG F ++ + +H + ++ V + Sbjct: 61 KYLWLPLRSGDAVLAHLGMSGQFRVQPVGAP----DEKHLRIRFRFADDGG----EVRFL 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + E + + + +P D F+ ++ + LK ALL+Q +V Sbjct: 113 DQRMFGGLSYSEGGAEL-PGEIAHIARDPFDPLFDLDAFVAGIRRRKTGLKRALLDQTLV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNIY EALWRAKL + T +L +++ + V+ +A+D GG+S Sbjct: 172 SGVGNIYADEALWRAKLHYAKATETLKPLQA------REILGHARAVMSEALDVGGTSFD 225 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV+++G GYF+ +VYG+ G C G+ IRR RS+F C CQ Sbjct: 226 ALYVNVNGESGYFERGLAVYGQEGSGC-PRDGRPIRREPFMNRSSFRCPKCQ 276 >gi|167754595|ref|ZP_02426722.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|237733769|ref|ZP_04564250.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|167705427|gb|EDS20006.1| hypothetical protein CLORAM_00097 [Clostridium ramosum DSM 1402] gi|229383107|gb|EEO33198.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 270 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L + N + I + N+ D F A + I D+ R K+L Sbjct: 1 MPELPEVETVRRTLKNFVLNKKIISIDVLYPNIIEDDVEEFIEACTNQTINDIDRAGKFL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L+ +++ + HL M G + +H+H+ +L +N + YND R Sbjct: 61 IFKLD-DIAFVSHLRMEGKYHYVEHDEPLN----KHDHIIFNLDDNKQLR-----YNDTR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M LV PL LGPEP + IY + HK N +K+A+L+Q I+AGI Sbjct: 111 KFGRMKLVSLDNYMNEIPLCKLGPEPFNAKLEDIY--PKLHKSNLPIKHAILDQSIIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + L+P L K + +LI+ +L +AI GG+++ + Sbjct: 169 GNIYANEICFAMGLNPNTPACKLT------KKSVQELIEVSSAILNEAIAQGGTTIHSF- 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G FQ + + CG I ++ GR T+YC +CQK Sbjct: 222 SANGIDGLFQVKLKAHL---QKVCPICGGEITKVAIKGRGTYYCKHCQK 267 >gi|328457761|gb|AEB03184.1| formamidopyrimidine-DNA glycosylase fpg [Mycobacterium tuberculosis KZN 4207] Length = 304 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 32/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 127 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 128 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR RS+FYC Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGRDGENC-RRCGAVIRRERFMNRSSFYCPR 297 Query: 287 CQ 288 CQ Sbjct: 298 CQ 299 >gi|297626606|ref|YP_003688369.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922371|emb|CBL56943.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 301 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 138/293 (47%), Gaps = 21/293 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDF-PHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ + + + R R D P F + G++ + RR Sbjct: 1 MPELPEVEVVREGLAQFVEGRRIDAVRVLDARALKRHDGGPDDFVGSLVGRRCDEPRRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYL I L+G ++I HLGMSG F ++ P+H V I++ + T + + Sbjct: 61 KYLWIPLDGRDALIAHLGMSGQFRVDAPGAPL----PRHARVVITMDDGTQLR-----FV 111 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D R FG + P+R + +P D F + + K++ +K ALL+Q +V Sbjct: 112 DQRLFGSLAYCPGGAGL-PEPIRHIALDPFDPHFRVEAVAGRLQAKHTTVKRALLDQTLV 170 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALW A + T L V A+ AGG+S Sbjct: 171 SGIGNIYADEALWLAHTNYEHPTSLLSTRRARAVLR------RAADVRRRALAAGGTSFD 224 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV++ G GYF +VYG+ G+PC CG I R RS++ C CQ+ Sbjct: 225 ALYVNVHGDSGYFARGLAVYGRDGQPC-PRCGTAIVRQRFMNRSSYLCPRCQR 276 >gi|312830067|emb|CBX34909.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 290 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VYYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYR---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|284044548|ref|YP_003394888.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] gi|283948769|gb|ADB51513.1| formamidopyrimidine-DNA glycosylase [Conexibacter woesei DSM 14684] Length = 284 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR L + T+ + P+ A G++I RR KY Sbjct: 1 MPELPEVETVRRQLEPRLVGRTLVAYAVRDARWTEPRSPNEVVAPLVGRRIEGFHRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ E E L +++HL M+G+ + + + + + + + DP Sbjct: 61 LIWEAEDELFLLIHLRMTGNLLYDAPEGT------LYTRAHFGFDDGHDLR-----FVDP 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L+ + LG EP + F A +L + +K LL+QK +AG Sbjct: 110 RRFGTGWLLAGQSELDAYLDARLGVEPFSDGFTAEHLRRLARGSRAPIKAFLLDQKRIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+R+++ P+R+ + L + L IDA G+S+ D+ Sbjct: 170 IGNIYADEALFRSRIHPLRQAGRVTTAQ------WELLRDAVVDALSAGIDARGASIDDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DG+ G FQ+ F ++ + + CL CG IR+I+ AGR T+ C +CQ Sbjct: 224 RDLDGARGSFQDRFLIHRRADDGCLE-CGGPIRKILAAGRGTYVCEHCQ 271 >gi|213583920|ref|ZP_03365746.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 213 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 19/232 (8%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 KYLL+EL II+HLGMSGS I ++ + +H+HV + ++N + Y Sbjct: 1 KYLLLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YT 50 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K+V Sbjct: 51 DPRRFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLV 108 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+ Sbjct: 109 VGVGNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLK 162 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 163 DFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 213 >gi|313902129|ref|ZP_07835539.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] gi|313467592|gb|EFR63096.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter subterraneus DSM 13965] Length = 355 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 101/351 (28%), Positives = 147/351 (41%), Gaps = 74/351 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD------FPHHFSAATRGKKIIDVS 54 MPELPEVE IRR+L + +T + + R + P F A G ++ + Sbjct: 1 MPELPEVETIRRDLERHLAGARITRVHVLRPEVVCGAGGEAIGPEAFRAVLEGTRLGRFA 60 Query: 55 RRAKYLLIEL----------------------------------EGNLSIIVHLGMSGSF 80 RR KYLLIEL G L + +HL M+G Sbjct: 61 RRGKYLLIELHRAAGDPAAGSGLNTAPVLPDEPAGRRVRPAGPGGGRLWLAIHLRMTGRL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP-- 138 + + P H HV L + ++D RRFG + L+ + + Sbjct: 121 TLARRGEPR----PPHTHVVFELEPGPGRSWEELRFSDVRRFGRLYLLPDNPLARARGRP 176 Query: 139 ---------------------LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 L TLGPEP F A L + + + +K LL+Q++V Sbjct: 177 AKRRAGGTVPEGPHGGTGLQGLYTLGPEPLSRRFGAAELGRRLAGRRAPIKAVLLDQRVV 236 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL+RA++ P R SL + +L + I+ VL +A+ AGG++ Sbjct: 237 AGLGNIYADEALFRARIHPARPAGSLTGQE------VARLARAIRSVLREAVAAGGTTFS 290 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DY G G F +VY + G PC CG + + AGR++ YC CQ Sbjct: 291 DYRDGLGREGRFGRRLAVYDREGLPC-PRCGTPVAALRLAGRTSHYCPRCQ 340 >gi|312194941|ref|YP_004015002.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] gi|311226277|gb|ADP79132.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EuI1c] Length = 312 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 98/320 (30%), Positives = 141/320 (44%), Gaps = 48/320 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+ + + F+ G+ + RR Sbjct: 1 MPELPEVEVVRRGLERGVVGRTIATVTVLHPRAVRRHTGGAADFAGVLVGQTVTAARRRG 60 Query: 58 KYLLIELE----------------------------GNLSIIVHLGMSGSFIIEHTSCAK 89 KYL + L +++ HLGMSG ++ S Sbjct: 61 KYLWLALSADPDRGPAPHPEPAGLAPAAAPLPAGPRDGDALLGHLGMSGQLLVVPPSA-- 118 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P H+ I LT ++ R + D R FG M LV+ P+ + +P D Sbjct: 119 ----PDQTHLRIRLTFTDGGRELR--FVDQRTFGHM-LVDEGGAALPAPMAHIARDPLDP 171 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 F+ + + LK ALL+Q +V+GIGNIY EALW A+L R T +L + Sbjct: 172 LFDDTAFVAGLAARRTGLKRALLDQGLVSGIGNIYADEALWAARLHYARPTETLRGTDA- 230 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +L+ E++ VL A+ AGG+S R YV +G G F+ + YG+ G PC S CG Sbjct: 231 -----RRLLAEVRTVLTAALAAGGTSFDRLYVSTEGVSGLFERELTAYGRAGLPC-SRCG 284 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 IRR RS+F C CQ Sbjct: 285 SPIRRDSFMNRSSFSCPTCQ 304 >gi|254455806|ref|ZP_05069235.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] gi|207082808|gb|EDZ60234.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. HTCC7211] Length = 287 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 118/300 (39%), Positives = 172/300 (57%), Gaps = 24/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+R++L +K V + + +NLRF P +FS+ KKII V R +KYL Sbjct: 1 MPELPEVEIVRQSLNKKIKQKKVKKVIVRNRNLRFKIPLNFSSYFENKKIIKVERFSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS----------CAKPIKNPQHNHVTISLTNNTNTK 110 ++ L ++ ++HLGMSG+ I P +HNHV I Sbjct: 61 ILYLSKSIYCLIHLGMSGTIHIIENKMNNIITNTSFYNSPTLPKKHNHVEIIFE------ 114 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 K++V+YNDPRRFGF ++ + K LGPEP D +F+ Y+ + F KN ++KN Sbjct: 115 KFKVVYNDPRRFGFFQII-KNKKNLKERFNHLGPEPFDLNFDLNYVYNYFKYKNRDIKNL 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK ++G+GNIY E L+++K+ P RK L K+ K+I +K+L+ AI Sbjct: 174 LLDQKFISGVGNIYASEILFKSKIHPYRKVCFLS------KEECKKIILNSKKILLKAIS 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 GGSS+RD+ + GS G FQN F VY + G C + C +I++ + + RSTF+C CQK Sbjct: 228 KGGSSIRDFKNTSGSKGGFQNEFKVYQQQGMKCKNFRCTDLIKKKISSNRSTFFCESCQK 287 >gi|223940228|ref|ZP_03632088.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] gi|223891115|gb|EEF57616.1| formamidopyrimidine-DNA glycosylase [bacterium Ellin514] Length = 284 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 106/307 (34%), Positives = 144/307 (46%), Gaps = 42/307 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVEI+ R+L ++ N +TD+ + R L A G + +SRR KY Sbjct: 1 MPELPEVEILVRHLAPLITNKKITDVEIRRSKVLAPTTASDLEEALTGARFTHLSRRGKY 60 Query: 60 LLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 LL L+ L ++ HLGM+G + K P+H V + L + R Sbjct: 61 LLFFLKSPRMQCPLQLLGHLGMTGRMYL----LPKNAGLPKHAAVILGL------GRERF 110 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++ D R FG L S L LGPEP F Y H + +K LL+Q Sbjct: 111 VFEDTRYFGRFTLDTRS-------LAALGPEPWSPEFTDEYFHHALKRSTQPVKVKLLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +VAG+GNIY EAL+RA +SP +R + L + IQ+VL AI G + Sbjct: 164 SLVAGVGNIYASEALYRAGISPKLSSRKIKPIQA------KHLRKAIQEVLEQAIQCGST 217 Query: 235 SLRDYVHIDGSIGYF------------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 D+V I+G G+F Q VY + G+ C CG I+R VQA RSTF Sbjct: 218 LPLDFVGIEGKNGHFYYGSAGDSSEFYQERLLVYDRLGQSCGK-CGAGIKRFVQAARSTF 276 Query: 283 YCTYCQK 289 YC CQ+ Sbjct: 277 YCPRCQR 283 >gi|299531517|ref|ZP_07044923.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] gi|298720480|gb|EFI61431.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni S44] Length = 279 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGARIEKATLGKP-LRWPL-GLLPQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V L LG EP + F S +K LL+ +V G Sbjct: 112 RFGAVIYVPDEGDVLARKLLDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + + + L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPATPARDVGRR------KVKVLYEAIRSVLALAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG I+ + Q RST+YC CQK Sbjct: 226 SAANGMEGHFQLEAQVYGRDGLPCSH-CGAAIQLMRQGQRSTYYCARCQK 274 >gi|264676954|ref|YP_003276860.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] gi|262207466|gb|ACY31564.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni CNB-2] Length = 279 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEKATLGKP-LRWPL-GLLPQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEEPLGTGGAHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V L LG EP + F S +K LL+ +V G Sbjct: 112 RFGAVIYVPDEGDVLARKLLDHLGMEPLSDGFTLDAFQAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + + + L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPTTPARDVGRR------KVKVLYEAIRSVLALAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG I+ + Q RST+YC CQK Sbjct: 226 SAANGMEGHFQLEAQVYGRDGLPCSH-CGAAIQLMRQGQRSTYYCARCQK 274 >gi|93117335|gb|ABE99585.1| fpg [Neisseria meningitidis] Length = 239 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 83/252 (32%), Positives = 135/252 (53%), Gaps = 13/252 (5%) Query: 13 NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIV 72 + ++ TV + L + LR+ G++++ RRAKYL++ + +++ Sbjct: 1 GIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYLIVRFQTG-ILLI 59 Query: 73 HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSL 132 HLGMSGS I S + ++ +H+HV I ++ T + Y DPR+FG + E + Sbjct: 60 HLGMSGSLRIFTPSDGRIGRSDRHDHVDIVFSDGTVMR-----YRDPRKFGAILWYE-GI 113 Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + +P L LGPEP +F YL + + +K AL++ +V G+GNIY E+L+RA Sbjct: 114 EEHHPLLEKLGPEPLLEAFCTDYLYVRLKAQKRAVKLALMDNAVVVGVGNIYANESLFRA 173 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 +SP R L + L++ ++ VL AI+ GGS+LRD+V DG GYFQ Sbjct: 174 GISPHRPANRLKKKE------CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQE 227 Query: 253 FSVYGKTGEPCL 264 ++VYG+ +PC Sbjct: 228 YTVYGRHNQPCP 239 >gi|325000485|ref|ZP_08121597.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudonocardia sp. P1] Length = 280 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 88/294 (29%), Positives = 146/294 (49%), Gaps = 27/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + V + + P F+A G+ + +RR Sbjct: 1 MPELPEVEVVRRGLADHVLDRRVAAVEVLHPRAVRRHPTGSADFTARLTGRTLRAAARRG 60 Query: 58 KYLLIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 KYL +EL+ G+ +++ HLGMSG ++E + + +H V + ++ Sbjct: 61 KYLWLELDTAEAGDDALLAHLGMSGQMLVEDPAEP----DEKHLRVRLRFDDD----GPE 112 Query: 114 VIYNDPRRFGFMDLVE----TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D R FG + + + P+ + +P D +F+A ++ + +K Sbjct: 113 LRFVDQRTFGGLSVHPLAPASGGGLLPEPVAHIARDPMDPAFSADDTVAALRRRRTEVKR 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q +V+GIGNIY EALWRA+L +R T L + G + ++ V+ A+ Sbjct: 173 ALLDQTVVSGIGNIYADEALWRARLHGLRPTEKLTRAQG------HAVLDAATTVMTAAL 226 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 GG+S YV+++G+ GYF + +VYG+ C CG IRR RS+F Sbjct: 227 AQGGTSFDALYVNVNGASGYFDRSLNVYGQVDRAC-PRCGTPIRRDAFMNRSSF 279 >gi|283851990|ref|ZP_06369266.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] gi|283572714|gb|EFC20698.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio sp. FW1012B] Length = 289 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 101/307 (32%), Positives = 145/307 (47%), Gaps = 36/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + V I + + ++ A G+ + VSRRAK Sbjct: 1 MPELPEVETIARALAPGLVGRVVVGIEAPDRKVLAAPKTRAAWARAAAGRTVTAVSRRAK 60 Query: 59 YLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 LL+ L E L HL M+G F I T P + + + Sbjct: 61 LLLVHLGPAPAPGSLPGAPDLDEDTLLFAFHLKMTGRFHIAPTDAP----PPAYARLLVR 116 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L + + ++++D RRFG L+ +P TLGPEP D + Sbjct: 117 LDDGQS-----LVFSDMRRFGTARLLTPQALSDWPFYATLGPEPWD--MTPEAFEAALSR 169 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + +K LL+Q ++AGIGNIY E+L+ A + P +SL KL+ +Q Sbjct: 170 RTTRIKAVLLDQTVMAGIGNIYADESLFAAGIRPDTPAKSLSAGQRQ------KLLAAVQ 223 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ AI AGGS++RDY DG G FQ+ F+VYGK GEPC C ++ AGR++ Sbjct: 224 AVIGRAIAAGGSTIRDYRTPDGVEGGFQHQFTVYGKAGEPC-PGCRAVLVAAKVAGRTST 282 Query: 283 YCTYCQK 289 +C +CQK Sbjct: 283 FCPHCQK 289 >gi|297590777|ref|ZP_06949415.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] gi|297575663|gb|EFH94379.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus MN8] Length = 290 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 148/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTRQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|94984550|ref|YP_603914.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] gi|94554831|gb|ABF44745.1| formamidopyrimidine-DNA glycosylase [Deinococcus geothermalis DSM 11300] Length = 289 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 103/301 (34%), Positives = 154/301 (51%), Gaps = 43/301 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ + +I + D +A G++I +SRR KYL Sbjct: 1 MPELPEVETTRRKIEPLLAGRIILNIAHNAPQRYRD-----TALAHGRRISGLSRRGKYL 55 Query: 61 LIEL---------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 ++ L +L +IVHLGM+G F +E H VT+ T Sbjct: 56 ILHLVPPEARSDEPHDLELIVHLGMTGGFRLEEGP---------HTRVTL------TTDA 100 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG M +V P L +GPEP + F + + +K L Sbjct: 101 GQLYFNDPRRFGKMAVVPAGAYGGMPTLAAMGPEPLSDDFREEDFVRRAAWAGA-VKPWL 159 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LWRA++ P + +L +L + I++V+ +A+ A Sbjct: 160 LSQKPVSGVGNIYADESLWRARIHPAQT--NLSAPEAG------RLYRAIREVMAEAVAA 211 Query: 232 GGSSLRD----YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL D Y DG++G+FQ +VYG+TG+ C CG I+++V A R T +C C Sbjct: 212 GGSSLGDGPGNYRQHDGAVGFFQGQHAVYGRTGQLC-PRCGTPIQKMVLAQRGTHFCPAC 270 Query: 288 Q 288 Q Sbjct: 271 Q 271 >gi|221142561|ref|ZP_03567054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751515|gb|ADL65692.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 290 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGHT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|319761702|ref|YP_004125639.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|330823573|ref|YP_004386876.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] gi|317116263|gb|ADU98751.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans BC] gi|329308945|gb|AEB83360.1| formamidopyrimidine-DNA glycosylase [Alicycliphilus denitrificans K601] Length = 271 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR L + T+ + L K+LR+ G++++ V RR KY Sbjct: 1 MPELPEVEVTRRGLADAIGGATIRAVALG-KSLRWPL-GLAPGELAGQRVLAVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS H + H+H + T + +DPR Sbjct: 58 LLLDLQQGLLLIHLGMSGSLRFAHGLPQR----GPHDHFDMETDRGT------LRLHDPR 107 Query: 121 RFGFMDLVETSLKYQY-PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + Q L TLG EP F+ +K LL ++V G Sbjct: 108 RFGAVVWAAGEDDPQARKLLGTLGVEPLGEDFDFQAFHAALRASRMPIKQLLLAGRVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A++ P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLARIRPTMRASAIGSQRA------RRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG+ G+FQ +VYG+ G PC CG +R + Q RST++C CQ+ Sbjct: 222 SGVDGNAGHFQAEANVYGREGLPC-RQCGTPVRLLRQGQRSTYFCPNCQR 270 >gi|260907270|ref|ZP_05915592.1| Formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 307 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 92/315 (29%), Positives = 142/315 (45%), Gaps = 39/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---------FSAATRGKKII 51 MPELPEVE +R + T+T + + F AA G++II Sbjct: 1 MPELPEVESVRVGVHEWTAGTTITGAEVIDPRILGTTSQRRIDASAVDGFIAAVTGRRII 60 Query: 52 DVSRRAKYLLIELEGNL-------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 RR K++ + L +L S++VHLGMSG + + H H Sbjct: 61 AAERRGKFMWLTLGEDLGAGPAAEPAAPELSLLVHLGMSGQLRVHDAADEI------HRH 114 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGF---MDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 L ++ ++ + D R FG LV + + +P + +F Sbjct: 115 TRAILRLERGSESLQLRFIDQRIFGHLGVQPLVHAYGRLVPASANHIAADPLEPAFEPGL 174 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 Q +K + +K+ALL+Q +V+GIGNIY EAL+RA + P L T K L Sbjct: 175 ALEQLARKRTVVKSALLDQSLVSGIGNIYADEALFRAGIHP------LAIPARTRKSRLA 228 Query: 216 KLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 ++ +V+ DA+ GG+S YV+++G GYF A VYG+ G+ C+ CG I ++ Sbjct: 229 AVLDSATRVMSDALAVGGTSFDALYVNVNGESGYFDRALLVYGRGGQECV-RCGTEIEKM 287 Query: 275 VQAGRSTFYCTYCQK 289 GR + +C CQK Sbjct: 288 TIGGRGSHFCPNCQK 302 >gi|332670941|ref|YP_004453949.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] gi|332339979|gb|AEE46562.1| formamidopyrimidine-DNA glycosylase [Cellulomonas fimi ATCC 484] Length = 302 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 30/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ +HR + P F+ G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVAVHRDYSVRRHVEGPLDFAGRLAGRRLDAAVRRG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + L+ + +++ HLGMSG ++ + H V ++L + + + + Sbjct: 61 KFLWLLLDDEDAALMAHLGMSGQLLVRSAQDLRDEVRHPHLRVRLALDDGS-----ALDF 115 Query: 117 NDPRRFGF---MDLVETSL----------KYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 D R FG DLV T P+ + + D S + L + Sbjct: 116 VDQRTFGHLSVPDLVPTPDGAPGGLGSGRAVVPAPVTHIARDLLDPSLDRPALVEAVRAR 175 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K ALL+Q +V+GIGNIY E LWRA+L R T +L + + + + Q+ Sbjct: 176 RTGIKRALLDQALVSGIGNIYADEGLWRARLHYARPTDTLRRAE------VERALDGAQE 229 Query: 224 VLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 V+ A+ GG+S YV+++G+ GYF + +VYG+ G PC CG +RR RS++ Sbjct: 230 VMTAALAQGGTSFDALYVNVNGASGYFDRSLAVYGQAGRPC-PRCGAAVRRDEFMNRSSY 288 Query: 283 YCTYCQ 288 C CQ Sbjct: 289 TCPVCQ 294 >gi|331698523|ref|YP_004334762.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326953212|gb|AEA26909.1| Formamidopyrimidine-DNA glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 298 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 143/305 (46%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + F+ G+ + V RR Sbjct: 1 MPELPEVEVVRRGLADHVAGRRIATVTVAHPRAIRRHAAGAADFTGRLAGRLVGAVRRRG 60 Query: 58 KYLLIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KYL +EL G+ +++ HLGMSG ++ + +H V ++ ++ Sbjct: 61 KYLWLELADAAQDAPQPGDDAVLAHLGMSGQMLVADHG----KPDEKHLRVRVTFDDD-- 114 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY----QYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + D R FG + + P+ + +P D +F ++ Sbjct: 115 --GPELRFVDQRTFGGLSAHPLAPAAGGGLLPAPVAHIARDPMDPAFVLDDAVAGIRRRR 172 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + LK ALL+Q +V+GIGNIY EALWRA+L R T SL + G ++ +V Sbjct: 173 TGLKRALLDQTVVSGIGNIYADEALWRARLHWARPTESLTRAQG------RAVLTAAAEV 226 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + +A+ GG+S YV+++G+ GYF + +VYG+T C CG IRR RS+F Sbjct: 227 MDEALAQGGTSFDALYVNVNGASGYFDRSLAVYGQTDRAC-PRCGTPIRREAFMNRSSFS 285 Query: 284 CTYCQ 288 C CQ Sbjct: 286 CPRCQ 290 >gi|258424105|ref|ZP_05686987.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] gi|257845726|gb|EEV69758.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9635] Length = 290 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKTQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG M V + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFGEMRNV--ASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|15924679|ref|NP_372213.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50] gi|15927267|ref|NP_374800.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus N315] gi|49483931|ref|YP_041155.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|148268169|ref|YP_001247112.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH9] gi|150394236|ref|YP_001316911.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156980006|ref|YP_001442265.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu3] gi|255006473|ref|ZP_05145074.2| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425804|ref|ZP_05602228.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257428470|ref|ZP_05604868.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257431104|ref|ZP_05607481.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257433787|ref|ZP_05610145.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257436703|ref|ZP_05612747.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257794074|ref|ZP_05643053.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|258415778|ref|ZP_05682049.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|258421985|ref|ZP_05684905.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|258438257|ref|ZP_05689541.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|258443715|ref|ZP_05692054.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|258445926|ref|ZP_05694102.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|258448393|ref|ZP_05696510.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|258454126|ref|ZP_05702097.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|269203307|ref|YP_003282576.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282893184|ref|ZP_06301418.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|282904260|ref|ZP_06312148.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282906085|ref|ZP_06313940.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282909000|ref|ZP_06316818.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911316|ref|ZP_06319118.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282914485|ref|ZP_06322271.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282916949|ref|ZP_06324707.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282919454|ref|ZP_06327189.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282924831|ref|ZP_06332497.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282927819|ref|ZP_06335430.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|283770753|ref|ZP_06343645.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283958440|ref|ZP_06375891.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|293503563|ref|ZP_06667410.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|293510578|ref|ZP_06669283.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|293537120|ref|ZP_06671800.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|295405999|ref|ZP_06815807.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295428260|ref|ZP_06820889.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296274884|ref|ZP_06857391.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MR1] gi|297245075|ref|ZP_06928952.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|13701485|dbj|BAB42779.1| SA1512 [Staphylococcus aureus subsp. aureus N315] gi|14247461|dbj|BAB57851.1| similar to formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus Mu50] gi|49242060|emb|CAG40759.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA252] gi|147741238|gb|ABQ49536.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus JH9] gi|149946688|gb|ABR52624.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus JH1] gi|156722141|dbj|BAF78558.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257271498|gb|EEV03644.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275311|gb|EEV06798.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278052|gb|EEV08700.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 68-397] gi|257281880|gb|EEV12017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus E1410] gi|257284054|gb|EEV14177.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M876] gi|257788046|gb|EEV26386.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9781] gi|257839371|gb|EEV63844.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9763] gi|257842029|gb|EEV66458.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9719] gi|257848301|gb|EEV72292.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9299] gi|257851121|gb|EEV75064.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8115] gi|257855168|gb|EEV78107.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6300] gi|257858361|gb|EEV81246.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A6224] gi|257863578|gb|EEV86335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5937] gi|262075597|gb|ACY11570.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ED98] gi|282313197|gb|EFB43593.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C101] gi|282317264|gb|EFB47638.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus C427] gi|282319436|gb|EFB49788.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus D139] gi|282321666|gb|EFB51991.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M899] gi|282325011|gb|EFB55321.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WBG10049] gi|282327264|gb|EFB57559.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331377|gb|EFB60891.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus Btn1260] gi|282590329|gb|EFB95408.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A10102] gi|282595878|gb|EFC00842.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus C160] gi|282764502|gb|EFC04628.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8117] gi|283460900|gb|EFC07990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus H19] gi|283790589|gb|EFC29406.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus A017934/97] gi|285817372|gb|ADC37859.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus 04-02981] gi|290919965|gb|EFD97033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus M1015] gi|291095229|gb|EFE25494.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 58-424] gi|291466469|gb|EFF08990.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus M809] gi|294968996|gb|EFG45017.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8819] gi|295127660|gb|EFG57297.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297178155|gb|EFH37403.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A8796] gi|298694959|gb|ADI98181.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus subsp. aureus ED133] gi|312437853|gb|ADQ76924.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH60] gi|315130677|gb|EFT86663.1| hypothetical protein CGSSa03_10550 [Staphylococcus aureus subsp. aureus CGS03] gi|315195593|gb|EFU25980.1| hypothetical protein CGSSa00_08000 [Staphylococcus aureus subsp. aureus CGS00] gi|323440767|gb|EGA98476.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O11] gi|323442922|gb|EGB00545.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus O46] gi|329727534|gb|EGG63990.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21172] Length = 290 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|88658566|ref|YP_507413.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] gi|88600023|gb|ABD45492.1| formamidopyrimidine-DNA glycosylase [Ehrlichia chaffeensis str. Arkansas] Length = 270 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ R L + T+ DI ++R +LR + + V R+ KY+ Sbjct: 1 MPELPEVEIVCRALSSQILGKTILDIEVNRYDLRVPVTQNLCDIAVNSSVFQVLRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L +++HLGMSG+ I + IK +HNHV +NN +I+NDPR Sbjct: 61 VLVLSNQYYLVIHLGMSGNLIYSES----YIKQKKHNHVIFHFSNNN-----LLIFNDPR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ S + + G + + FN YL + +K+ + +K+ L+N K V GI Sbjct: 112 RFGIVILLTYSQYIE--FFKNFGVDALSDEFNTNYLYNTSNKRCT-IKSLLMNNKFVTGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A ++P R + L +I ++ +L+ +I+ GGSS++DY Sbjct: 169 GNIYSTESLFLAGIAPNRFVKDLSIIE------CNNIIDGVKNILLYSIENGGSSIKDYT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQN F VY +T + C C I I Q GRSTF+C YCQ Sbjct: 223 SPFGIRGTFQNHFLVYNRTRQQCYK-CNSSILVIKQNGRSTFFCPYCQ 269 >gi|297156898|gb|ADI06610.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 312 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 150/296 (50%), Gaps = 22/296 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + TV ++ + F+A +G++ RR Sbjct: 1 MPELPEVEVVRRGLERWISGRTVAEVQVLHPRAVRRHLGGGEDFAARLKGRRAGVARRRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L + + S++ HLGMSG +++ A + +H + + ++ T+ + + Sbjct: 61 KYLWLPLEDADESVLAHLGMSGQLLVQPHGAA----DEKHLRIRVRFNDSIGTE---LRF 113 Query: 117 NDPRRFGFMDLVET---SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 D R FG + L ET + + + +P D +F+ ++ + +K ALL+ Sbjct: 114 VDQRTFGGLSLHETVEGAADGLPAAIAHIARDPLDPAFDEAAFHTALRRRRTTVKRALLD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L R T +L + +L+ ++ V+ A+ GG Sbjct: 174 QSLISGVGNIYADEALWRARLHYDRPTATLTRPRSV------ELLDHVRDVMNAALAVGG 227 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +S YV+++G GYF+ + YG+ EPC C +RR RS+++C CQ Sbjct: 228 TSFDSLYVNVNGESGYFERSLDAYGRENEPC-RRCATPMRRRPWMNRSSYFCPRCQ 282 >gi|313813553|gb|EFS51267.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA1] Length = 280 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|82751277|ref|YP_417018.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus RF122] gi|82656808|emb|CAI81237.1| probable formamidopyrimidine DNA glycosylase [Staphylococcus aureus RF122] Length = 290 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGVFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|283470956|emb|CAQ50167.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus ST398] Length = 290 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFIEIAPEPFTNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|170781178|ref|YP_001709510.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169155746|emb|CAQ00867.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 311 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 27/308 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHH--FSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLIELE--------GNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + LE G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPEPTGDRTGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPAHGELVV 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + V G ++ + + +P D +F+ L + Sbjct: 121 AFVDQRIFGSMAVDRLVATPDGHAGGRGSTAALVPTQVAHIARDPLDPAFDDEQLLSRLA 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + +K ALL+Q +V+GIGNIY EALW A++ T L + +L+ E+ Sbjct: 181 RRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPTDQLGRGRAL------RLLAEV 234 Query: 222 QKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + VL A+ GG+S YV+++G+ GYF ++ + YG+ G+PC CG I R R Sbjct: 235 RHVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKPC-PRCGTPIVREAFMNRG 293 Query: 281 TFYCTYCQ 288 + +C CQ Sbjct: 294 SHFCPRCQ 301 >gi|282854596|ref|ZP_06263931.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|282582178|gb|EFB87560.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J139] gi|314966092|gb|EFT10191.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA2] gi|314981863|gb|EFT25956.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA3] gi|315090789|gb|EFT62765.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA4] gi|315094942|gb|EFT66918.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL060PA1] gi|315104263|gb|EFT76239.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA2] gi|327328031|gb|EGE69800.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 280 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------PQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|21283361|ref|NP_646449.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MW2] gi|49486515|ref|YP_043736.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57650560|ref|YP_186573.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87161684|ref|YP_494330.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195496|ref|YP_500300.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221794|ref|YP_001332616.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|161509903|ref|YP_001575562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253732340|ref|ZP_04866505.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258451797|ref|ZP_05699819.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|262048660|ref|ZP_06021543.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|262052260|ref|ZP_06024465.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|282920229|ref|ZP_06327954.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|284024737|ref|ZP_06379135.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus 132] gi|294848710|ref|ZP_06789456.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|297207598|ref|ZP_06924033.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911680|ref|ZP_07129124.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304380720|ref|ZP_07363389.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204801|dbj|BAB95497.1| MW1632 [Staphylococcus aureus subsp. aureus MW2] gi|49244958|emb|CAG43419.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MSSA476] gi|57284746|gb|AAW36840.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus COL] gi|87127658|gb|ABD22172.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203054|gb|ABD30864.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374594|dbj|BAF67854.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. Newman] gi|160368712|gb|ABX29683.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723862|gb|EES92591.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257860509|gb|EEV83335.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A5948] gi|259159861|gb|EEW44900.1| hypothetical protein SA930_0220 [Staphylococcus aureus 930918-3] gi|259163307|gb|EEW47866.1| hypothetical protein SAD30_1056 [Staphylococcus aureus D30] gi|269941169|emb|CBI49556.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus TW20] gi|282594577|gb|EFB99562.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9765] gi|294824736|gb|EFG41159.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus A9754] gi|296887615|gb|EFH26513.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887101|gb|EFK82302.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus TCH70] gi|304340719|gb|EFM06650.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198614|gb|EFU28942.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus CGS01] gi|320140433|gb|EFW32287.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA131] gi|320143971|gb|EFW35740.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus MRSA177] gi|329314361|gb|AEB88774.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus T0131] gi|329728368|gb|EGG64805.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21189] gi|329733282|gb|EGG69619.1| DNA-formamidopyrimidine glycosylase [Staphylococcus aureus subsp. aureus 21193] Length = 290 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|329737415|gb|EGG73669.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU028] Length = 290 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR KY++ + + + ++ HLGM+G F + + N +H V L N Sbjct: 61 IKKVERRGKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG ++ YP L + PEP + YL KK Sbjct: 121 -----KQKLVYSDIRRFG--EIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYK 173 Query: 166 --NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++ Sbjct: 174 NKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQERKS------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ + Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHF 284 Query: 284 CTYCQK 289 C CQ+ Sbjct: 285 CPNCQR 290 >gi|314923851|gb|EFS87682.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL001PA1] Length = 280 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 135/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------PQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L P + + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPLVDGIPGPVI-HIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC CG I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEPC-HRCGMPIVRESFMNRSSFRCPRCQR 278 >gi|91787193|ref|YP_548145.1| formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] gi|123355948|sp|Q12DZ5|FPG_POLSJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91696418|gb|ABE43247.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas sp. JS666] Length = 271 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 137/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + + LR+ G +++ V RR KYL Sbjct: 1 MPELPEVEVTRLSFAGRIAGARIEAVSMGKP-LRWPLGCS-PQQLVGLRVLAVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L L +++HL + + +H+H + + T + NDPR Sbjct: 59 LVDLSDGL-LLIHL----GMSGSVSFGSSLSSPGKHDHFDMVTSLGT------LRLNDPR 107 Query: 121 RFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + + + L LG EP ++F+A + + +K LL + V G Sbjct: 108 RFGAVVYAGDEHDAVAHKLLGRLGVEPLSDAFDAALFHQALKPRQTPIKQVLLGGEAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P K + + L + I++VL A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTTKASRISKPRA------ALLHRAIRQVLTQAVTKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G+FQ VY + G PC CG I+ I Q RSTFYC CQK Sbjct: 222 SNAQGEAGHFQLDAMVYDRAGMPC-KVCGSPIKSIRQGQRSTFYCVSCQK 270 >gi|121603812|ref|YP_981141.1| formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] gi|166198726|sp|A1VKP2|FPG_POLNA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120592781|gb|ABM36220.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Polaromonas naphthalenivorans CJ2] Length = 271 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ R + + + + + + LR+ + +G++++ V RR KY Sbjct: 1 MPELPEVEVTRLSFAERIAGARIEAVLVGKP-LRWPLGCE-TQQLQGQRVLAVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS +H+H + + T + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSVSFGLNLPV----TGKHDHFDMVTSLGT------LRLHDPR 107 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP ++F+A+ + + +K LL + V G Sbjct: 108 RFGAVVYASGEDDAVAKKLLGRLGVEPLSDAFDALVFHQWLKGRKTAIKPLLLAGQAVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P K + + +L + IQ VL +A+ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTTKASLISKPRA------ARLHRAIQDVLTNAVAKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ VY + G PC C I+ I Q RS+FYC CQK Sbjct: 222 SNADGEAGHFQLDAMVYDRAGLPC-RVCAAPIKSIRQGQRSSFYCATCQK 270 >gi|320334927|ref|YP_004171638.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] gi|319756216|gb|ADV67973.1| Formamidopyrimidine-DNA glycosylase [Deinococcus maricopensis DSM 21211] Length = 270 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 138/296 (46%), Gaps = 38/296 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L ++ T+ I + D + G+ + D++RR KY+ Sbjct: 1 MPELPEVETTRRKLEPLLLGRTIVRIEHDAPDKYRD-----THRAHGRVVRDLTRRGKYI 55 Query: 61 LIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L L E + +IVHLGM+G F E H VT+ + Sbjct: 56 LARLQDPDGHEDDAELIVHLGMTGGFRYEPGP---------HTRVTLHTDEG------AI 100 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 Y D R+FG +V+ P L +GPEP + F +K LL+Q Sbjct: 101 YYQDARKFGKWAVVDPGAYASMPTLAGMGPEPLGDDFAVDAFVRA-AATCGPVKPWLLSQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 VAG+GNIY E+LWRA++ P + R L + T +L I++V+ +A+ AGGS Sbjct: 160 VPVAGVGNIYADESLWRARIHPAQ--RRLTLDEAT------RLHAAIREVMAEAVQAGGS 211 Query: 235 SLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +L D Y DG G FQ + Y + GEPC CG I + V A R T +C CQ Sbjct: 212 TLSDGTYAQPDGLSGLFQQQHNAYARDGEPCA-RCGTTITKSVLAQRGTHHCPACQ 266 >gi|220912983|ref|YP_002488292.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] gi|219859861|gb|ACL40203.1| formamidopyrimidine-DNA glycosylase [Arthrobacter chlorophenolicus A6] Length = 323 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 51/327 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+ + + +R F +G + DV RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIESVDVLDPRSIRRHALGVEDFIGNLQGATVSDVVRRG 60 Query: 58 KYLLIELEGN----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 K+L + L ++++ HLGMSG +++ + + +H V + Sbjct: 61 KFLWLPLVDGSAHQQAAGNGQAPPSRVALMAHLGMSGQLLMQDAG----VPDEKHLKVRL 116 Query: 102 SLTNNTNTKKYRVIYNDPRRFG---FMDLVETS-------LKYQYPPLR----TLGPEPA 147 L+ + ++ + D R FG LV T + P + + +P Sbjct: 117 HLSPSAGMPG-QLRFVDQRIFGGLFVTALVPTDDGGPGGLAESPLPLIAGEASHIARDPL 175 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 D +F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T L + + Sbjct: 176 DPAFSFDRFYQRLRARKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTDKLRRAD 235 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSN 266 ++LI + V++DA+DAGG+S YV+++G+ GYF + + YG+ GEPC Sbjct: 236 A------FRLIDSARAVMLDALDAGGTSFDSLYVNVNGASGYFDRSLNAYGREGEPC-KR 288 Query: 267 C-----GQMIRRIVQAGRSTFYCTYCQ 288 C IRR RS++ C CQ Sbjct: 289 CTAAGIHATIRREQFMNRSSYTCPVCQ 315 >gi|253734527|ref|ZP_04868692.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] gi|253727468|gb|EES96197.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus aureus subsp. aureus TCH130] Length = 290 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVKFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ ++I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|326382853|ref|ZP_08204543.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326198443|gb|EGD55627.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 295 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 26/298 (8%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 PELPEVE IR L + +V D+ + H + R P S RGK+ RR K Sbjct: 4 PELPEVETIRLGLSAHLSGRSVRDVEVLHPRAARRHVGGPIDLSNRLRGKRFEGAERRGK 63 Query: 59 YLLI---ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 Y+ + + ++++VHLGMSG +I P+ H + + L + + + Sbjct: 64 YMWLLASDSADEVAVVVHLGMSGQMLIAEQGAEDPV----HLRIRVPLDDG-----HELR 114 Query: 116 YNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + D R FG DLV+T + + + P+P +++F+ + ++++ +K A+L Sbjct: 115 FVDQRTFGGWHLDDLVDTGPRRLPESVAHIAPDPFEDAFDRGAVIDSLRRRDTEIKRAIL 174 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +++G+GNIY E+LWRA+L R+TR G P+ L L+ +V+ +AI G Sbjct: 175 DQTVISGVGNIYADESLWRAELHGRRRTR------GIPRARLGDLVDHATQVMGEAIKVG 228 Query: 233 GSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+S D YV+++G GYF+ + + YG+ G C C + R RS+F+C CQ+ Sbjct: 229 GTSFDDLYVNVNGQSGYFERSLNAYGREGLLC-RRCETPMVREAFMNRSSFFCPTCQR 285 >gi|303327976|ref|ZP_07358415.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] gi|302861802|gb|EFL84737.1| DNA-formamidopyrimidine glycosylase [Desulfovibrio sp. 3_1_syn3] Length = 285 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 95/300 (31%), Positives = 142/300 (47%), Gaps = 26/300 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + + R A G++I DV RR K L Sbjct: 1 MPELPEVETVARTLRPQVQECLIEGAEVLRSGSLHPLSLP-PATLAGRRIADVGRRGKLL 59 Query: 61 LIEL---EGNLS--------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+ L E + + VHL M+G ++ H L Sbjct: 60 LVHLAPPESGRTPEETAPDLLAVHLRMTGRLMVYAPGTP----PGSHTRCVFDLRTPDGD 115 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ R+ ++D R FG + + + R LGPEP + + + LK Sbjct: 116 RR-RLFFDDTRAFGLVLAATPEILQAWDFWRELGPEPLEIG--EREFAALLRSRGAALKA 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+QK++AGIGNIY E+L++A L P RK SL L+ ++ VL +I Sbjct: 173 VLLDQKVIAGIGNIYADESLFQAGLDPRRKASSLSPAQS------RCLLAALKDVLRRSI 226 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GSS+RDY +G +G FQN+F+VYG+ G C+ CG+ +++I AGR+T C +CQK Sbjct: 227 AQCGSSIRDYRDANGDVGAFQNSFAVYGRGGAACV-RCGRPLQKIRVAGRATVCCPHCQK 285 >gi|209526485|ref|ZP_03275012.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] gi|209493120|gb|EDZ93448.1| formamidopyrimidine-DNA glycosylase [Arthrospira maxima CS-328] Length = 288 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 40/294 (13%) Query: 19 KNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL------------- 64 N + + + F A I RR KYLL +L Sbjct: 3 LNQPIVGADVLLDSAIAHPTAVEFIAQLTNTTINHWYRRGKYLLAQLQAPSQPSNPIFTS 62 Query: 65 --------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + VHL M+G + + P H H + L + + + Sbjct: 63 KDPIETKTSDGGWLGVHLRMTGQLLWLTSD------QPLHKHTRVRLFLQG---ERELRF 113 Query: 117 NDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D R FG + V + LR LGPEP + F+ YL ++ + +K ALL+Q Sbjct: 114 VDQRTFGKIWWVPPGMAVMDVISGLRELGPEPLSDEFSPEYLANKLRLRQRPIKTALLDQ 173 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 I+AG+GNIY EAL+ A + P +R L + D + +L I +VL +AI +GG+ Sbjct: 174 AILAGLGNIYADEALFLAGIQPTTPSRRLSE------DQVNRLCTHIVEVLQEAIASGGT 227 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++R+++++ G G + + VY + G+PC C I +I +GR T +C CQ Sbjct: 228 TIRNFLNVQGVNGNYGSHAWVYQRGGKPC-RVCQTPIAKIKLSGRGTHFCPRCQ 280 >gi|240047522|ref|YP_002960910.1| formamidopyrimidine-DNA glycosylase [Mycoplasma conjunctivae HRC/581] gi|239985094|emb|CAT05087.1| DNA glycosylase [Mycoplasma conjunctivae] Length = 271 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + R L + +T I + N + P +F A + IID+ AK+ Sbjct: 1 MPELPEVVTVVRALSQKIIGKKITQIKIRSDNFIKEISPKNFIAEVKNATIIDIKNHAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ N II HL M+G + K K H+++ ++ + + YND Sbjct: 61 ILIFLDNNKVIISHLRMNGKYF-----TYKSAKWFAHDYLQFIFSDQSV-----LNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L Y PL+ + EP D + + K N +K LL+QK++ G Sbjct: 111 RKFGTFHLRRLESLYSLAPLKNVASEPFDI--DVEQFFAKLQKINKTIKAVLLDQKLIGG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + K+SP+ ++L + LI+ +++L +I GGSS+ Y Sbjct: 169 IGNIYADEICFATKISPLTIAKTLNFQE------VKLLIENAKRILAASIKLGGSSINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K G+PC C Q I ++ AGR T+ C CQK Sbjct: 223 TSLNAKQGSFQNFLQVHTKVGKPC-PVCQQTIVKLKVAGRGTYVCNQCQK 271 >gi|297622481|ref|YP_003703915.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] gi|297163661|gb|ADI13372.1| formamidopyrimidine-DNA glycosylase [Truepera radiovictrix DSM 17093] Length = 267 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 24/280 (8%) Query: 11 RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS-AATRGKKIIDVSRRAKYLLIELEGNLS 69 RR L ++ + L P + G++I+ V+RR K+L++ L G Sbjct: 2 RRELEPYVRGRVILAATLVDAP---PGPKYARLERAVGQRILAVTRRGKFLILPLSGGDD 58 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +I+HLGM+G P P+H V + L+ + + D RRFG +V Sbjct: 59 LIIHLGMTGIL--------SPEPAPKHVRVRLELSEGG-----ALYFRDARRFGRFLVVP 105 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L +GPEP +F L + + +K LL+QK V+G+GNIY EAL Sbjct: 106 SGAYEALPTLSAMGPEPLSAAFTGDALYRALQRSRTPIKPFLLSQKPVSGVGNIYADEAL 165 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 WRA++ P+ + + +L I++VL ++ A G++L+DY ++G +G + Sbjct: 166 WRARIHPLTPANEVSRAKA------AQLAGAIREVLAASLRAKGTTLQDYRTVNGEVGAY 219 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ +PC CG +R++ GR T +C CQ+ Sbjct: 220 ALQLQAYGRAEKPC-PRCGSPLRKVTLGGRGTHFCARCQR 258 >gi|88856700|ref|ZP_01131355.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] gi|88813997|gb|EAR23864.1| formamidopyrimidine-DNA glycosylase [marine actinobacterium PHSC20C1] Length = 298 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 28/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T + + ++LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLEPAVTGATAASVTVFDERSLRRHEGPSEDFIDRLTGRVFLPPQRRG 60 Query: 58 KYLLIELEG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 K++ I L +++ HLGMSG ++ S + + I L + + Sbjct: 61 KFMWIPLTDSDDAHGEALVTHLGMSGQVLLRDQSTDDRL-----TRIRIELDHPEH-GAL 114 Query: 113 RVIYNDPRRFGFMDL------VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 R+ + D R FG M + V+ + + +P D F+ K + Sbjct: 115 RLNFVDQRIFGSMAIDSMLPTVDQPAFAVPSQVAHIARDPLDPHFDDAGFLRALKAKRTT 174 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K ALL+Q +V+GIGNIY EALW A++ + T +L + L+ E++ V Sbjct: 175 VKRALLDQTLVSGIGNIYADEALWAARVHYNQPTGTLSRAKAL------LLLAEVRAVFS 228 Query: 227 DAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A+ GG+S Y++++G GYF ++ +VYG+ G C CG+ + R R + +C Sbjct: 229 KALAEGGTSFDTQYLNVNGESGYFAHSLNVYGQQGRAC-PRCGREVVREQFMNRGSHFCR 287 Query: 286 YCQK 289 +CQ+ Sbjct: 288 FCQR 291 >gi|229820102|ref|YP_002881628.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] gi|229566015|gb|ACQ79866.1| formamidopyrimidine-DNA glycosylase [Beutenbergia cavernae DSM 12333] Length = 310 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 137/305 (44%), Gaps = 30/305 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL---HRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + + + + A G RR Sbjct: 1 MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+ + L+ +++VHLGMSG ++ +P+H I ++ +++ Sbjct: 61 KFCWLTLDTGRALLVHLGMSGQLLVRGAGQDA-QDDPRHLRARIRFADDGE-----LLFI 114 Query: 118 DPRRFGF---MDLVET----------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 D R FG+ DLV T + + + D + L + Sbjct: 115 DQRTFGYLTSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLLDPALRIDELVTAVRTRR 174 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 S +K ALL+Q +V+G+GNIY EALWRA++ P R TR L P+ + +++ V Sbjct: 175 SAVKRALLDQSLVSGVGNIYADEALWRARVHPERATRGL------PRLAVRSVLESAAGV 228 Query: 225 LIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + DA+ GG+S YV ++G+ GYF + SVYG+TG PC CG I R RS+ + Sbjct: 229 MQDALAQGGTSFDALYVDVNGASGYFDRSLSVYGQTGRPC-PRCGTAIVRSEFMNRSSHW 287 Query: 284 CTYCQ 288 C CQ Sbjct: 288 CPTCQ 292 >gi|15805520|ref|NP_294216.1| formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] gi|6458179|gb|AAF10070.1|AE001908_5 formamidopyrimidine-DNA glycosylase [Deinococcus radiodurans R1] Length = 291 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +++ T+ I +H R+ + G+++ ++RR KYL Sbjct: 12 MPELPEVETTRRKIEPLLRGKTIERI-VHDAPHRY----RNTERAHGRQVRGLTRRGKYL 66 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ L +L +IVHLGM+G F +E H VT L + Sbjct: 67 LLHLAAADAAEDEPHDLELIVHLGMTGGFRLEEGP---------HTRVTFELGSGE---- 113 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG + V P L +GPEP + F + +K L Sbjct: 114 -KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFVA-LAARCGPVKPWL 171 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A+L P + D +L + I++V+ A+D Sbjct: 172 LSQKPVSGVGNIYADESLWHARLHPAQT--------RLNADEAGRLYRAIREVMAAAVDK 223 Query: 232 GGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C C Sbjct: 224 GGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPCD-RCGTPIEKIVLGQRGTHFCPVC 282 Query: 288 Q 288 Q Sbjct: 283 Q 283 >gi|313680246|ref|YP_004057985.1| DNA-(apurinic or apyrimidinic site) lyase; formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] gi|313152961|gb|ADR36812.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Oceanithermus profundus DSM 14977] Length = 265 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 144/291 (49%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L V+ + + G+++ + RR KYL Sbjct: 1 MPELPEVETVRRMLAPVVTGRRLLGLEHDDPARYAAAEAA-----VGRRVHALRRRGKYL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G L ++VHLGMSGS ++ + H + T V +NDPR Sbjct: 56 IFALTGGLELVVHLGMSGSLRLDEGT---------HTRARLEFEGVT------VFFNDPR 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + V P L +GPEP F A + + LK ALL+Q+ VAG+ Sbjct: 101 RFGKLRAVPAGDYRVLPTLARMGPEPLTRGFTARAFAARLARTARPLKPALLSQEPVAGL 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY EALW+A+L P R +L D + +L + ++ VL A++ GGS+L D Sbjct: 161 GNIYADEALWKARLHPARPANALAP------DEVRRLHRAVRAVLRRAVERGGSTLGDGA 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y DG GYFQ +VYG+ GE C CG+ I R+V GRST C CQ+ Sbjct: 215 YTRPDGEPGYFQIEHAVYGRAGEAC-PRCGRTIERLVLGGRSTHVCPRCQR 264 >gi|24211712|sp|Q9RX22|FPG_DEIRA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM Length = 280 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +++ T+ I +H R+ + G+++ ++RR KYL Sbjct: 1 MPELPEVETTRRKIEPLLRGKTIERI-VHDAPHRY----RNTERAHGRQVRGLTRRGKYL 55 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ L +L +IVHLGM+G F +E H VT L + Sbjct: 56 LLHLAAADAAEDEPHDLELIVHLGMTGGFRLEEGP---------HTRVTFELGSGE---- 102 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ +NDPRRFG + V P L +GPEP + F + +K L Sbjct: 103 -KLYFNDPRRFGKVVAVAPGDYASMPTLAAMGPEPLSDDFTEAEFVA-LAARCGPVKPWL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+QK V+G+GNIY E+LW A+L P + D +L + I++V+ A+D Sbjct: 161 LSQKPVSGVGNIYADESLWHARLHPAQT--------RLNADEAGRLYRAIREVMAAAVDK 212 Query: 232 GGSSL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGSSL +Y DG G FQ++ VYG+ G+PC CG I +IV R T +C C Sbjct: 213 GGSSLGNGVGNYRQHDGEGGGFQHSHHVYGRAGQPCD-RCGTPIEKIVLGQRGTHFCPVC 271 Query: 288 Q 288 Q Sbjct: 272 Q 272 >gi|309810299|ref|ZP_07704137.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] gi|308435727|gb|EFP59521.1| DNA-formamidopyrimidine glycosylase [Dermacoccus sp. Ellin185] Length = 350 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 148/353 (41%), Gaps = 77/353 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNM-----TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE++RR L + VT + R++L P H + A G+++ R Sbjct: 3 MPELPEVEVVRRGLDDHVVGRAFVTSRVTGSRVARRHL--PGPQHLADALLGRRVASAQR 60 Query: 56 RAKYLLIELEG-----------------------NLSIIVHLGMSGSFIIEHTSCAKPIK 92 R KYL + E + ++++HLGMSG ++E Sbjct: 61 RGKYLWMTFEDAAPGSDGSADATVPLDRREGAVADDALVIHLGMSGQVLVESADSPL--- 117 Query: 93 NPQHNHVTISLTNNTNTKKYR--------------------------------VIYNDPR 120 +H H L+ R + + D R Sbjct: 118 -EKHAHAVFDLSAPVKLSPPRKSGERAGSGEAVDAPGVTDASERPRSEPSAQQMRFVDQR 176 Query: 121 RFG---FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 FG DL + + + P+P + +F+A K+ +K LL+Q IV Sbjct: 177 TFGGLFLDDLTVAHGREVPASIAHIAPDPLEEAFDAGAAARLMRSKDVAIKRMLLDQGIV 236 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GIGNIY EALWRA++ R R L + L ++ Q V+ A+D GG+S Sbjct: 237 SGIGNIYADEALWRAQVHGRRPGRMLTKTQ------LIGVLTAAQDVMRSALDHGGTSFD 290 Query: 238 D-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + YG+ G+PC CG +I R RS+ +C CQK Sbjct: 291 ALYVNVNGASGYFDRSLDAYGQQGKPC-RRCGTLIVREQFMNRSSHFCPTCQK 342 >gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 286 Score = 245 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE I+ +L ++ + + L P F G ++ RRAK+ Sbjct: 1 MPELPEVETIKNDLRGLVVGSRIERAEVREPALVEQPPQEEFVRRLGGARVTGARRRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++EL+ +++ L + G ++ P++ P+ + V + L+ + R++ D Sbjct: 61 LVVELDTGEALVFQLKIGGQLLLVP-----PVEEPE-DSVMLVLSLDGG---RRLLLRDQ 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 F L+ K L LGPEP F YL + + + +K LL+Q +++G Sbjct: 112 TGFSRARLL--GEKELAERLSGLGPEPFSEEFTVRYLKERLGSRRAQIKPLLLDQSLISG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A+LSP R+ SL + +L I+ L I+ G+++R Y Sbjct: 170 IGNIYADEILYDARLSPRRRASSLSEEE------WERLYAAIRSNLAAGIEHRGTTVRLY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G QN V+ + G PC CG + R GR T YC CQ Sbjct: 224 RDVLGRAGEHQNHLRVFERHGGPC-PRCGAEVVRERVGGRPTHYCPRCQ 271 >gi|302333354|gb|ADL23547.1| formamidopyrimidine-DNA glycosidase [Staphylococcus aureus subsp. aureus JKD6159] Length = 290 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKDQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +L+ +I HLGM+G F I I N +H HV L+N Sbjct: 61 ITNVKRRSKYIVFQLDNKREKRILISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 + ++IY+D RRFG ++ + YP + PEP N YL HQ K Sbjct: 121 DK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P +K + L + +++ Sbjct: 174 NKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKIKDLTYQQQEM------VFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY +P CG I + A R++ Y Sbjct: 228 VLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIETKIIATRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|242373980|ref|ZP_04819554.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] gi|242348334|gb|EES39936.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis M23864:W1] Length = 290 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 140/306 (45%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +KN + + ++ F+ T G Sbjct: 1 MPELPEVEHVKRGIEPYIKNERIKKVIFSDNVIKGKKDNRETIIKGMELDSFAKLTEGYT 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+++ +E + +I HLGM+G F + N +H V L N Sbjct: 61 ITQVLRRSKYIVLHIERDNDQRILISHLGMAGGFFVVDDLEDIATPNYRKHWQVIFELEN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 +++Y+D RRFG ++ + YPP + PEP + A YL Sbjct: 121 EK-----KLVYSDIRRFG--EIRNVAGFESYPPFLEIAPEPFEEEALAHYLSCFDINKYA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+RA + P + +L L +++ Sbjct: 174 NKPIKQMILDHKVIAGAGNIYACEALFRAGVRPDKIAHTLTHQEREM------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + CG I V A R++ + Sbjct: 228 VLKEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKICGHEIETKVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPNCQK 290 >gi|27468284|ref|NP_764921.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57867171|ref|YP_188826.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251811084|ref|ZP_04825557.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|293366363|ref|ZP_06613042.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315830|gb|AAO04965.1|AE016748_199 formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis ATCC 12228] gi|57637829|gb|AAW54617.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis RP62A] gi|251805381|gb|EES58038.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis BCM-HMP0060] gi|291319488|gb|EFE59855.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis M23864:W2(grey)] gi|329733766|gb|EGG70092.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU045] Length = 290 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 145/306 (47%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY++ + + + ++ HLGM+G F + + N +H V L N Sbjct: 61 IKKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG ++ YP L + PEP + YL KK Sbjct: 121 -----KQKLVYSDIRRFG--EIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYK 173 Query: 166 --NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++ Sbjct: 174 NKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQERKS------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ + Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHF 284 Query: 284 CTYCQK 289 C CQ+ Sbjct: 285 CPNCQR 290 >gi|57239162|ref|YP_180298.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|58579116|ref|YP_197328.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] gi|57161241|emb|CAH58159.1| formamidopyrimidine-DNA glycosylase [Ehrlichia ruminantium str. Welgevonden] gi|58417742|emb|CAI26946.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Welgevonden] Length = 269 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++ + L + T+ I ++R +LR + +G I + R+ KY+ Sbjct: 1 MPELPEVEVVCKILSTKIVGKTILKIQINRYDLRTQITEKLADIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHDYITM-----KHNHVLFFFNDNQI-----LVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + + G +P ++FN YL F++K +++K+ L+N KI+ GI Sbjct: 111 RFGSLTLLTYEQYLE--FFKDFGIDPLSDNFNTEYLYSSFNRK-TSIKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFMAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q RSTF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCY-ICNNKISMIKQHSRSTFFCSHCQ 268 >gi|329724651|gb|EGG61157.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU144] Length = 290 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 145/306 (47%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY++ + + + ++ HLGM+G F + + N +H V L N Sbjct: 61 INKVERRSKYIIFYIADHDDDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 K +++Y+D RRFG ++ YP L + PEP + YL KK Sbjct: 121 -----KQKLVYSDIRRFG--EIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTMKKYK 173 Query: 166 --NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++ Sbjct: 174 NKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQERKS------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ + Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHF 284 Query: 284 CTYCQK 289 C CQ+ Sbjct: 285 CPNCQR 290 >gi|325283264|ref|YP_004255805.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] gi|324315073|gb|ADY26188.1| Formamidopyrimidine-DNA glycosylase [Deinococcus proteolyticus MRP] Length = 271 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 40/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ T+ DI D + G+ +++ RR KYL Sbjct: 1 MPELPEVETTRRKIAPLVTGRTIVDIRHLSPKKYPD-----TGLAHGRTVLEPQRRGKYL 55 Query: 61 LIELEGNLS------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ L +IVHLGM+G F +E H +T+ L + + Sbjct: 56 ILPLAQGPDAAPDRELIVHLGMTGGFRLEEGP---------HTRLTLQLDSG------EL 100 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +NDPRRFG + +V+ P L +GPEP ++SF Q K +K LL+Q Sbjct: 101 HFNDPRRFGRVRVVQAGDYAALPTLAAMGPEPLEDSFELEA-FAQAAAKAGAVKPWLLSQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + VAG+GNIY EALWRA++ P + + +L +++V+ +A++ GGS Sbjct: 160 RPVAGVGNIYADEALWRARIHPAQ--------RHLSAEQAARLHAAVREVMREAVELGGS 211 Query: 235 SL----RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 SL +Y DG G FQ + YG+ G+PC CG I + V R T +C CQ Sbjct: 212 SLGNGVSNYRQHDGDWGGFQLQHAAYGRGGQPC-PRCGTTIEKTVLGQRGTHFCPQCQ 268 >gi|152965345|ref|YP_001361129.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] gi|189044663|sp|A6W7S6|FPG_KINRD RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|151359862|gb|ABS02865.1| formamidopyrimidine-DNA glycosylase [Kineococcus radiotolerans SRS30216] Length = 308 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 42/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV+ + P A TRG + D RR Sbjct: 1 MPELPEVEVVRRGVARWVVGRTVSSARFLHPRVTRRHVAGPDDAGARTRGLVVADAVRRG 60 Query: 58 KYLLIELEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL + L +++VHLGMSG ++E + +H + + Sbjct: 61 KYLWLPLATPDGRAEEAMVVHLGMSGQLLVEAADAPE----EKHLRAVWTFDDGGE---- 112 Query: 113 RVIYNDPRRFGFMDLVE--------TSLKYQYP----------PLRTLGPEPADNSFNAI 154 + + D R FG + +V + P P+ + +P D +F+ Sbjct: 113 DLRFVDQRTFGGIAVVPLVATPDGGPGGLGETPDGSWSGSMPAPVAHIARDPLDPAFDDA 172 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + ++ + LK ALL+Q +V+G+GNIY EALWRAKL R TRS+ Sbjct: 173 VFARRLRERTTGLKRALLDQTLVSGVGNIYADEALWRAKLHYARPTRSVTPAQAAALLAG 232 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 + +V+ A+DAGG+S YV+++G+ GYF + +VYG+ G PC CG ++RR Sbjct: 233 LR------EVMTAALDAGGTSFDSLYVNVNGASGYFDRSLAVYGQEGRPC-PRCGALVRR 285 Query: 274 IVQAGRSTFYCTYCQ 288 RS+F C CQ Sbjct: 286 DAFMNRSSFSCPVCQ 300 >gi|320108584|ref|YP_004184174.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] gi|319927105|gb|ADV84180.1| formamidopyrimidine-DNA glycosylase [Terriglobus saanensis SP1PR4] Length = 270 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 136/292 (46%), Gaps = 27/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHF-SAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + + L K P G +I V R K Sbjct: 1 MPELPEVETVANGVHERVHGRRIQHVTLGTKPEPLKSPAALIEETLTGARIERVHRVGKT 60 Query: 60 LLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ +L + VHLGM+G ++ ++ P H H ++L + + + + Sbjct: 61 IVFDLLRDKKPAQFTVHLGMTGRLLVSKGE----VEVPPHTHAILALDD-----EREIRF 111 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 DPRRFG + ++ Y G EP F + + +K ALLNQ + Sbjct: 112 VDPRRFGRLAVIAPQTTYAGT-----GQEPLTIGL--EDFIALFRSRKTPIKAALLNQSL 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + G+GNIY E+L+RA + P R+ L + L +L ++ VL AI GGSS+ Sbjct: 165 LHGVGNIYADESLFRAGIRPKRQAGRLTRAE------LARLHTALKDVLKHAIQLGGSSV 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DYV DG G+FQ VY +TG+PCL C I++I GRST +C CQ Sbjct: 219 SDYVDADGVRGFFQLEHKVYMRTGQPCL-VCETPIKKITVGGRSTHFCPVCQ 269 >gi|319892737|ref|YP_004149612.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|317162433|gb|ADV05976.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius HKU10-03] gi|323464231|gb|ADX76384.1| formamidopyrimidine-DNA glycosylase [Staphylococcus pseudintermedius ED99] Length = 290 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 99/305 (32%), Positives = 148/305 (48%), Gaps = 33/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----------FPHHFSAATRGKK 49 MPELPEVE ++R + + + V D+ R F T G + Sbjct: 1 MPELPEVEHVKRGITPHIMHQKVIDVTFSEPVKRGKLEGKETIIKGIDLDAFVKYTVGFE 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I DV RR+KY+L +E +I HLGM+G+F + + I N +H V L N Sbjct: 61 IADVQRRSKYILFRIENGNVERILISHLGMAGAFFVVQSLDDIAIPNFRKHWQVVFHLEN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN- 164 +++Y+D RRFG + VE+ YP + + PEP + A YL KK Sbjct: 121 G-----IKLVYSDIRRFGEIRNVES--LEAYPSILEIAPEPFEQEALAYYLAKSDEKKYL 173 Query: 165 -SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ ++++G GNIY CEAL+ A++ P +K + L T KL + K Sbjct: 174 NKAIKPFILDHRVISGCGNIYACEALFDAQIHPEKKVKDLSIAEKT------KLFNSVVK 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL I GG+S+ DYVH DG G Q+ VY + + C + C I ++ +GR+T + Sbjct: 228 VLEMGILNGGTSVADYVHADGQRGTMQDHLKVYKQ--KRCAT-CETAIETVIISGRNTHF 284 Query: 284 CTYCQ 288 C CQ Sbjct: 285 CPNCQ 289 >gi|227543197|ref|ZP_03973246.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181006|gb|EEI61978.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51866] Length = 273 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 135/290 (46%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L ++ + + + G++I RR K+L Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAARST-EALAPRLAGREICGTGRRGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+G ++++HL MSG I T+ P H I V + D R Sbjct: 60 WLVLDGAEALVIHLRMSGQMRITQTA------RPVSPHTRIV----AELDGLTVQFVDQR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG L E L + P+ D S + + + LK ALLNQ IV+GI Sbjct: 110 TFGSWSLSELVDGLPVT-LAHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY E LWRA+L P + + + L +L+ Q V+ DA+ GG+S + Y Sbjct: 169 GNIYADEMLWRARLHPRQTRSHVSPHR------LTELLLAGQDVMRDALAQGGTSFDELY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 223 VNVNGESGYFDRSLNAYGKAGLPCD-RCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|327334307|gb|EGE76021.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 280 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G G+F YG+ EPC C I R RS+F C CQ+ Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEPC-HRCETPIIRESFMNRSSFRCPRCQR 278 >gi|242242955|ref|ZP_04797400.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|242233556|gb|EES35868.1| possible DNA-(apurinic or apyrimidinic site) lyase [Staphylococcus epidermidis W23144] gi|319401004|gb|EFV89223.1| formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis FRI909] Length = 290 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + ++K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPLIKSAKIEKVTFAKNVINGKNNHRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY++ + + + ++ HLGM+G F + + N +H V L N Sbjct: 61 IKKVERRSKYIIFYIAYHDEDRILVSHLGMAGGFFVVNNLDEISTPNYRKHWQVIFDLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--HKK 163 + +++Y+D RRFG ++ YP L + PEP + YL K Sbjct: 121 DQ-----KLVYSDIRRFG--EIRNIVNFDSYPSLLEIAPEPFEEVAFEHYLECLTLKKYK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ +++AG GNIY CEAL+RA ++P + T SL + L +++ Sbjct: 174 NKPIKQTILDHRVIAGAGNIYACEALFRAGITPDKITNSLTKQERKS------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + + C CG I V AGR++ + Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGQMQLHLNVYKQ--KKC-KVCGHSIETKVIAGRNSHF 284 Query: 284 CTYCQK 289 C CQ+ Sbjct: 285 CPNCQR 290 >gi|319653434|ref|ZP_08007534.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317394918|gb|EFV75656.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 269 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + +TD+ ++R+ P + +I +++RRAK+L Sbjct: 1 MPELPEMETYRRLLTEQLARKVITDVEVNREKSINVQPAQLKSQLINAQITEITRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L ++++HL + G I + + + V IS + +Y Sbjct: 61 IFKLSSGKNLLLHLMLGGWMYIGNEAD----NPDRTKQVIISFGDKK-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + + L LGPEP + + + LK +NQ+ ++GI Sbjct: 110 RLGYLHLLTDTEVEKE--LSDLGPEPLGQTLGFPAFRERLGSRRGMLKTTFINQQFLSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A L P+RK L + D + L Q ++ VL AI GG Sbjct: 168 GNCYSDEICFEAGLLPMRKADELDE------DEIKILYQSMKGVLTRAIQFGGYMEEPLF 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GEPCL C I + + R TFYC CQ Sbjct: 222 KGDAKTGGYNEQCRVYDREGEPCL-RCSSPIVKEEISSRKTFYCANCQ 268 >gi|227488593|ref|ZP_03918909.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091487|gb|EEI26799.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glucuronolyticum ATCC 51867] Length = 273 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 135/290 (46%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++RR L ++ + + + G++I RR K+L Sbjct: 1 MPELPEVEVVRRGLDRLLVGHRFVSVSVLHPRAARST-EALAPRLAGREICGTGRRGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+G ++++HL MSG I T+ P H I V + D R Sbjct: 60 WLVLDGAEALVIHLRMSGQMRITQTA------RPVSPHTRIV----AELDGLTVQFVDQR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG L E L + P+ D S + + + LK ALLNQ IV+GI Sbjct: 110 TFGSWSLSELVGGLPVT-LAHIAPDLLDASLDIRGVAKHLKRGRGELKPALLNQGIVSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY E LWRA+L P + + + L +L+ Q V+ DA+ GG+S + Y Sbjct: 169 GNIYADEMLWRARLHPRQTRSHVSPHR------LTELLLAGQDVMRDALAQGGTSFDELY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+++G GYF + + YGK G PC CG + + GR + YC +CQ+ Sbjct: 223 VNVNGESGYFDRSLNAYGKAGLPCD-RCGTEMVKEKIGGRGSTYCPHCQR 271 >gi|89100042|ref|ZP_01172912.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] gi|89085276|gb|EAR64407.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] Length = 275 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 125/288 (43%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R+ L + + +T+ ++R+ P F + I + RRAK+L Sbjct: 7 MPELPEMETCRQLLGRQLTGLMITEAEINREKSINVPPAEFIRQVQNSTITSIDRRAKHL 66 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++++HL + G + + + V +S R +Y Sbjct: 67 IFRLSSGKNLLLHLMLGGWMYLGNDED----NPDRTKQVILSF-------GSRKLYFIGL 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + LGPEP D F A KK LK +L+NQ +AGI Sbjct: 116 RLGYLHLLTAQELEKE--FEELGPEPLDPGFTAASFAQLLEKKRGMLKTSLVNQHFIAGI 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E +A L P+RK L + + +L ++ V +AI +GG Sbjct: 174 GNCYSDEICHQAGLLPMRKIEELSEMEKS------RLYPAMKTVFANAIQSGGYMDEPLF 227 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE CL CG I + + R TFYC CQ Sbjct: 228 KGDLITGGYNERCMVYDRKGESCL-RCGSQIVKEEISSRKTFYCPGCQ 274 >gi|319795625|ref|YP_004157265.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] gi|315598088|gb|ADU39154.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus EPS] Length = 270 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + + LR+ A G+ + +V RR KYL Sbjct: 1 MPELPEVEVTRRGFADRIAGARIESVRIGKP-LRWAL-MVVPEALVGRHVREVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ LGMSGS + H+H + T + NDPR Sbjct: 59 LIDLDQGLLLLH-LGMSGSLRFDTALPP----PGTHDHFDLVTDRGT------LRLNDPR 107 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V+ + + L LG EP ++F+ K+ + +K LL +V G Sbjct: 108 RFGAVVYVDDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKTTVKQVLLAGDVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL++A + P + + KL ++++L A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFQAGIRPTLSAARISRPRA------AKLHAAVREILARAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++DG GYFQ +VYG+ GEPC C IR++ Q RST++C CQK Sbjct: 222 SNVDGQNGYFQLEATVYGRAGEPC-RVCATPIRQLRQGQRSTYFCPNCQK 270 >gi|284931593|gb|ADC31531.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. F] Length = 274 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ P F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATPKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I S K + +H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKI---SQFKAKYDERHVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L+ L +P ++ YL + K + +K+ LL+Q +VAG Sbjct: 112 RRFGTFHIHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P +K L ++ + KVL+ AI+ G+++ Y Sbjct: 172 IGNIYADEILFLSKINPAKKANELTDQQ------FKEISKNATKVLLKAIELNGTTIFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 226 QFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] Length = 300 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 130/290 (44%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPEL EVE+IRR L + TVT + + + + F+ G I + RR KY Sbjct: 27 MPELAEVEMIRRVLEPQLGGRTVTKLLVVRPEVVAHPQTEQFAENVCGAVIERLCRRGKY 86 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L I + +VHL M+G ++ ++ + +SL + + + D Sbjct: 87 LQIIFQNGSRAVVHLRMTGQLLVLPADSP----PEKYTQLVLSLDDGRELR-----FLDM 137 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG ++ + ++TLGPEP+D A YL + +K+ LL Q+ VAG Sbjct: 138 RRFGRWWFLQKDEPDTFTGMQTLGPEPSDERLTAGYLREKAGASRKAIKDWLLCQQYVAG 197 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ A + P R SL + +L +EI + + ++ S DY Sbjct: 198 IGNIYSDEILFAAGIYPGRGACSLTEKE------WERLAEEIPRTMQFFVEKNEISAEDY 251 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G VYG G PC CG + AGRS+ YC CQK Sbjct: 252 LKSKGRDYRNTPYLQVYGHKGAPC-PKCGAPLAGSRIAGRSSVYCLQCQK 300 >gi|313678500|ref|YP_004056240.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] gi|312950460|gb|ADR25055.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] Length = 279 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L +KN +T++ + L + P F + I+D+ K Sbjct: 1 MPELPEVKTVVKALKSNIKNAKITNVFVFLDKLIKNVSPQEFKEYLLNETILDIYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L + ++I HL M+G + + +H++V L N + + YND Sbjct: 61 IIFKLSKDKNLISHLRMTGKYF----TDTSLHHKRKHDYVIFELNN-----QMYLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + S + PL LG E + + L K +K+ LL+Q + G Sbjct: 112 RQFGTFHIKDESELFTTKPLDKLGKEV--DQIDPDKLHQLIKNKTIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ + ++P K + P L +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILYLSGINPWTKVNKI------PYAKLIEILNNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ + PC C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRANLPCNK-CKTLIKQETIAQRMTYYCPLCQK 272 >gi|314936208|ref|ZP_07843555.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] gi|313654827|gb|EFS18572.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis subsp. hominis C80] Length = 290 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 149/308 (48%), Gaps = 37/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N T+ I +K ++ F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F I + I N +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN----SFNAIYLTHQFH 161 +++++D RRFG ++ + YP + PEP D FN YL+ + Sbjct: 121 GK-----KLVFSDIRRFG--EIRNLNSFEDYPSFLEIAPEPFDEEALQHFN-HYLSQK-K 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 N +K LL+ KI+AG GNIY CEAL+RA + P RK + L + Sbjct: 172 VANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQERQ------LLFYYV 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 Q+VL + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ Sbjct: 226 QEVLKEGIDNGGTSISDYRHADGKTGKMQLHLNVYK---QKTCKVCGHDIEQKVIASRNS 282 Query: 282 FYCTYCQK 289 +C YCQK Sbjct: 283 HFCPYCQK 290 >gi|47459207|ref|YP_016069.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] gi|81697049|sp|Q6KHS0|FPG_MYCMO RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|47458536|gb|AAT27858.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mobile 163K] Length = 274 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + +L ++ + T++ I + + + F + I ++ K+ Sbjct: 1 MPELPEVKTVILHLKKLILDKTISKIEIFIPKMIKEISSEEFKKYLENETIFNIENEGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + K I H+ + T+ ++ + Y+D Sbjct: 61 IVFFLSNNKIMLSHLRMEGGYNFYSKKRQKEI----HDRLIFHFTDGSS-----LHYHDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + PL + P P + +K + +K LL+Q+I+AG Sbjct: 112 RMFGTFHFRNSENYLKIKPLSLVAPVPWKIDLDE--FFKLLKRKKTAIKKILLDQQIIAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K+ P K L + +++ ++L ++ GGSS+R Y Sbjct: 170 LGNIYVDETLFASKVHPEFKANQLSLEQ------VKLILKNATRILQESTKLGGSSIRSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K +PC NCG++I++I GR T++C CQ+ Sbjct: 224 TSLNEKEGSFQNFLQVHTKFNKPC-PNCGELIQKIKLGGRGTYFCKKCQQ 272 >gi|228475233|ref|ZP_04059959.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] gi|228270844|gb|EEK12246.1| DNA-formamidopyrimidine glycosylase [Staphylococcus hominis SK119] Length = 290 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 103/308 (33%), Positives = 149/308 (48%), Gaps = 37/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N T+ I +K ++ F G K Sbjct: 1 MPELPEVEHVKRGIEPFIVNATIKSISFSKKVIEGKSQNKETIIKGMNLDGFRLNCEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 II V RR+KY++ +E + ++ HLGM+G F I + I N +H HV L N Sbjct: 61 IIKVERRSKYIVFHIEKHNRKRVLLSHLGMAGGFFIVNHLSEIAIPNYRKHWHVIFHLNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN----SFNAIYLTHQFH 161 +++++D RRFG ++ + YP + PEP D FN YL+ + Sbjct: 121 GK-----KLVFSDIRRFG--EIRNLNSFEDYPSFLEIAPEPFDEEALQHFN-HYLSQK-K 171 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 N +K LL+ KI+AG GNIY CEAL+RA + P RK + L + Sbjct: 172 VANKPIKQMLLDHKIIAGCGNIYACEALFRAGIHPARKVKDTSHQERQM------LFYYV 225 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 Q+VL + ID GG+S+ DY H DG G Q +VY + CG I + V A R++ Sbjct: 226 QEVLKEGIDNGGTSISDYRHADGKTGKMQLHLNVYK---QKTCKVCGHDIEQKVIASRNS 282 Query: 282 FYCTYCQK 289 +C YCQK Sbjct: 283 HFCPYCQK 290 >gi|58617172|ref|YP_196371.1| formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] gi|58416784|emb|CAI27897.1| Formamidopyrimidine-DNA glycosidase [Ehrlichia ruminantium str. Gardel] Length = 269 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI+ + L + T+ I ++R +LR +G I + R+ KY+ Sbjct: 1 MPELPEVEIVCKILSTKIVGKTILKIQINRYDLRTQITEKLVDIVQGCYISKILRKGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L I++HLGMSG+ I H +HNHV +N +++NDPR Sbjct: 61 IFILNNQYYIVIHLGMSGTLICNHDYVTM-----KHNHVLFFFNDNQI-----LVFNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L+ + + G +P ++FN YL F++K +++K+ L+N KI+ GI Sbjct: 111 RFGSLTLLTYKQYLE--FFKDFGIDPLSDNFNTEYLYSTFNRK-TSIKSLLMNNKIITGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ AK+ P + T ++ Q T +++ ++ +L+ +I GGSS+R+Y+ Sbjct: 168 GNIYSTESLFTAKVLPTKLTTNISQLECTT------IVENLKNILLLSIKHGGSSIRNYI 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G FQN FSVY + G C C I I Q GR+TF+C++CQ Sbjct: 222 SPTGTKGNFQNYFSVYNRAGLLCY-ICNNKISMIKQHGRNTFFCSHCQ 268 >gi|262277744|ref|ZP_06055537.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] gi|262224847|gb|EEY75306.1| formamidopyrimidine-DNA glycosylase [alpha proteobacterium HIMB114] Length = 286 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 21/297 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI + +L + + V ++ + LR+ + + K I + RR+KYL Sbjct: 1 MPELPEVEITKISLSKQILHKKVKNVTILNPRLRYKLNKQNLLSLKNKIIKKIIRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTNTKKY 112 LI ++VHLGM+G F K +H+H+ +S K + Sbjct: 61 LIHFNDKNILLVHLGMTGRFYFVKKGKNKIDTSFYTKNEIIKKHDHLKLSF------KGF 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 +IYND R+FGF+ + ++ L +LGPEP +F+ YL ++ NS++KN L+ Sbjct: 115 DLIYNDIRKFGFIKKILSTNIESTKHLSSLGPEPLSLNFSFKYLKNKIRNSNSSVKNLLM 174 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 NQ +V+G+GNIYV EAL+R+ +SP + + L K+I I+KVL AI AG Sbjct: 175 NQSVVSGLGNIYVNEALFRSCVSPQKPGKFLKDIET------RKIIIAIKKVLKMAIKAG 228 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 GS++++Y + +G G +Q F VY + GE C C IRR++ +GRS+F+C CQ Sbjct: 229 GSTIQNYHNSEGKTGSYQANFKVYDREGETCKRAGCTGKIRRVIASGRSSFFCIKCQ 285 >gi|256824934|ref|YP_003148894.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688327|gb|ACV06129.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 297 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 27/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + T+ + + + A G+++ RR Sbjct: 1 MPELPEVEVVRAGLESHVVGRTIEVADVRGDRVARRHEGGAAALARALTGRRLCSAERRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K+L + L+ +++ HLGMSG ++ +H H + + T + + Sbjct: 61 KFLWLPLDDGHALMTHLGMSGQMLVLPAEEP----PVRHEHARLDFEDEGPT----LRFA 112 Query: 118 DPRRFGFMD---LVETSLKYQYPP-----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 D R FG LV +P + P+P + F+A + + + +K Sbjct: 113 DQRTFGGWSVDPLVPDPHGGDHPGGVPATATHIAPDPFETCFDAGAVAARLRTRRGPVKR 172 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 A+L+Q +V+G+GNIY EALWR + R SL L+ +Q V+ +A+ Sbjct: 173 AILDQGLVSGVGNIYADEALWRTGVHGERPGHSLTGPRA------RALLTHLQAVMGEAL 226 Query: 230 DAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG+S YV+++G+ GYF +VYG+ G PC CG + R GRS+ +C CQ Sbjct: 227 EQGGTSFDALYVNVNGASGYFDRRLAVYGQQGRPC-PACGSTVLRSPFDGRSSHWCPTCQ 285 >gi|239817308|ref|YP_002946218.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] gi|259647152|sp|C5CYZ1|FPG_VARPS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|239803885|gb|ACS20952.1| formamidopyrimidine-DNA glycosylase [Variovorax paradoxus S110] Length = 270 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 148/290 (51%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + + + + + LR+ A G++++ V RR KYL Sbjct: 1 MPELPEVEVTRRGFAERIAGARIDAVRIGKP-LRWAL-MVMPEALVGRRVLQVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ LGMSGS + A + H+H + T + NDPR Sbjct: 59 LIDLDRGLLLLH-LGMSGSLRFDAALPAPGV----HDHFDLVTELGT------LRLNDPR 107 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + VE + + L LG EP ++F+ K+ + +K LL +V G Sbjct: 108 RFGAVVYVEDEAAPWAIKLLGGLGMEPLGDAFDLDAFHAGLRKRKAAVKQVLLAGDVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + + +L ++++L A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTLSAARISRPRA------ARLHAAVREILARAVEKGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++G GYFQ +VYG+ GEPC C IR + Q RST+YC CQK Sbjct: 222 SNVEGQSGYFQLEATVYGRAGEPC-RVCATPIRLLRQGQRSTYYCPNCQK 270 >gi|221068913|ref|ZP_03545018.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] gi|220713936|gb|EED69304.1| formamidopyrimidine-DNA glycosylase [Comamonas testosteroni KF-1] Length = 279 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + L + LR+ A G+ ++ V RR KY Sbjct: 1 MPELPEVEVTRRSFADRIAGAQIEAATLGKP-LRWPLGLQ-PQALVGRVVLGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A + H+H + T + + +DPR Sbjct: 58 LLLDLSEGLLLMHLGMSGSLRFAGRDEAPLGEGGPHDHFDL------QTSRGLLRLHDPR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + V L LG EP F L S +K LL+ +V G Sbjct: 112 RFGAVVYVPGESDALARKLLDHLGMEPLSEGFTLAALKAGLAASRSPIKQLLLSGSVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +++ P R + T L + I+ VL A++ GG++LRD+ Sbjct: 172 VGNIYASEVLFLSRIHPATPARDVGARKVT------ALYEAIRAVLAMAVEKGGTTLRDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +G G+FQ VYG+ G PC CG IR + Q RST+YC+ CQK Sbjct: 226 SAANGMEGHFQLQAQVYGRDGLPCTH-CGAAIRLMRQGQRSTYYCSSCQK 274 >gi|184200694|ref|YP_001854901.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] gi|183580924|dbj|BAG29395.1| formamidopyrimidine-DNA glycosylase/AP lyase [Kocuria rhizophila DC2201] Length = 309 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 147/313 (46%), Gaps = 35/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPH--HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR + + TV + + ++LR F G + RR Sbjct: 1 MPELPEVEVVRRGVERWVVGRTVESVQVFDARSLRRHTAGVLDFQERLAGLTVESAQRRG 60 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L + L + + +++VHLGMSG ++ + P+H + ++L+ + Sbjct: 61 KFLWLPLRERTGSKPSQALLVHLGMSGQLLVASADQPQ----PRHERIRLALSPAHDDAG 116 Query: 112 YRV----IYNDPRRFGFMDLVETSLKYQ-----YPPLRTLGPEPADNSFNAIYLTHQFHK 162 + + D R FG M L + + +P D F+ + Sbjct: 117 AALPEQARFVDQRIFGGMLLDPLAPSTDGHGTVPEHAAHIARDPLDPLFDVDAFHTALRR 176 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 + + LK ALL+Q +++GIGNIY EALW AKL T ++ +L+ Q Sbjct: 177 RRTGLKRALLDQGLISGIGNIYADEALWAAKLHWAAPTETMTAPRT------RELVAACQ 230 Query: 223 KVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRIVQ 276 +V+ A++AGG+S YV+++G GYF + + YG+ G+PC C +I R Sbjct: 231 EVMRRALEAGGTSFDSLYVNVNGESGYFSRSLNAYGRAGQPC-PRCEAAGLDGVIVREQF 289 Query: 277 AGRSTFYCTYCQK 289 A RS++ C+ CQ+ Sbjct: 290 ANRSSYRCSRCQR 302 >gi|213029143|ref|ZP_03343590.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 220 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 19/239 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDF 220 >gi|225873850|ref|YP_002755309.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792432|gb|ACO32522.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 280 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 144/301 (47%), Gaps = 33/301 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + R F P +A G++I V R K+ Sbjct: 1 MPELPEVETVAQGVHERAHGQRILAAEFSRAREPFKTDPDTMAAVLTGQRIARVHRVGKH 60 Query: 60 LLIELE-----------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 ++ +LE + IVHLGM+G + S + P H H +SL++ Sbjct: 61 IVFDLETPRPPKGKAEPADHQWIVHLGMTGRLLYSAAS----VPVPPHTHGRLSLSSG-- 114 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + + D RRFG M L + P G EP + F + ++K Sbjct: 115 ---HELRFVDARRFGRMGLHSGARAQ---PFSGPGSEPL--HISPEDFAALFRGRKLSIK 166 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALLNQK++ G+GNIY E+L+ A + P R SL + + L KL +Q+VL A Sbjct: 167 AALLNQKLLHGVGNIYADESLYWAGIRPTRIAGSLSR------ERLLKLHAALQQVLRKA 220 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I+ GGSS+ DYV DG G+FQ VY + GEPC C IR++V AGR T YC CQ Sbjct: 221 IELGGSSVSDYVDADGVRGFFQLEHRVYDRAGEPC-RACAAEIRKMVHAGRGTHYCPRCQ 279 Query: 289 K 289 + Sbjct: 280 R 280 >gi|78355589|ref|YP_387038.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217994|gb|ABB37343.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 295 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 97/309 (31%), Positives = 143/309 (46%), Gaps = 34/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L + +T++ + F A T G+ I V RR K L Sbjct: 1 MPELPEVETIARGLAPELTGRRITEVEVFNAGSVQGDREVFDACTPGRVIAGVGRRGKLL 60 Query: 61 LIEL--------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 L+ L + + HL MSG I H + Sbjct: 61 LVHLEKERRQGAACRAVLDHRPAGDTPDMLAFHLRMSGRLFIYGPEQL----PGPHTRII 116 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 I+L + R+ ++D R+FG + + + TLGPEP D + QF Sbjct: 117 ITLDSGR-----RLFFDDARKFGSCRALSPFSRPLWRFWATLGPEPLD--VDRETFIEQF 169 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q ++AG+GNIY E+L+RA + P + ++ + L +L E Sbjct: 170 AERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDEAERR--LGRLYDE 227 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +++VL +AI GSS+RDY G G FQN F VYG++G C+S C + AGR+ Sbjct: 228 LREVLREAISECGSSIRDYRDARGDAGAFQNCFRVYGRSGMQCVS-CRDALTTARVAGRT 286 Query: 281 TFYCTYCQK 289 T YC+ CQK Sbjct: 287 TVYCSNCQK 295 >gi|329930846|ref|ZP_08284245.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] gi|328934548|gb|EGG31053.1| putative DNA-formamidopyrimidine glycosylase [Paenibacillus sp. HGF5] Length = 272 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +TD+ ++R+ F++A +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + +P ++ V I+ + +V+Y Sbjct: 61 IFHLHNGGRLLLHLMLGGILYLGRRDEERPSRS---TQVEITFGD-------QVLYFIGL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 111 RLGYLHFLTARETEN--ALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P L + P++ L +L K++ +A D GG + Sbjct: 169 GNCYADEIAFDARIHP------LSKIQDLPEESLEQLYDSAVKLMHEATDGGGYMEMPFQ 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 223 EGDELTGAYNDECKVYDRGGEPCV-RCGTPIVKAEHASRKIFFCPNCQ 269 >gi|111225161|ref|YP_715955.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111152693|emb|CAJ64434.1| formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil [Frankia alni ACN14a] Length = 321 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 93/330 (28%), Positives = 149/330 (45%), Gaps = 57/330 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + + + + P F+A G+++ RR Sbjct: 1 MPELPEVEVVRRGLQRGVVGRVIASVAVCHPRAVRRHPAGAGDFAALLVGQRVTAARRRG 60 Query: 58 KYLLIEL-------------------------------------EGNLSIIVHLGMSGSF 80 KYL + L + ++I HLGMSG Sbjct: 61 KYLWLALRTDLAAAVAAAAPALAIEPGTEGAPAGLPVLESPPSAAPDDALIAHLGMSGQL 120 Query: 81 IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLR 140 ++ P P H+ I T ++ R + D R FG + + + P+ Sbjct: 121 LVV------PPTTPDQRHLRIRFTFVDGGRELR--FVDQRTFGGLAVAVGGGEL-PEPVA 171 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + +P D +F+ + + + + +K ALL+Q +V+G+GNIY EALW A++ T Sbjct: 172 HIARDPLDPAFDEDLVVRRLRDRRTGVKRALLDQTLVSGVGNIYADEALWAARMHYAHPT 231 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKT 259 +L + + +L+ ++ V+I A+DAGG+S R YV DG G F+ + +VYG+ Sbjct: 232 ETLTRPE------VRRLLDCVRTVMIAALDAGGTSFDRLYVSTDGVSGLFERSLAVYGRA 285 Query: 260 GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+PC CG IRR RS+F C CQ+ Sbjct: 286 GQPCG-RCGDTIRRDAFMNRSSFTCPTCQR 314 >gi|193216889|ref|YP_002000131.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] gi|193002212|gb|ACF07427.1| formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma arthritidis 158L3-1] Length = 275 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+++ L + N ++ + ++ L R P F G+ I +++ R K+ Sbjct: 1 MPELPEVKVVISALKKHILNKKISALEIYHAKLFREHKPEVFIKKLAGRTIKNITNRGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I L+ +L ++ HL M G + + + H + + + Y D Sbjct: 61 IIIFLDDDLILLSHLRMEGKYRYYEANNLPLAND--HLIAKFIFED-----QSELHYLDS 113 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG L T + PL + EP + N L ++ + +K LL+Q++VAG Sbjct: 114 RRFGTFHLRTTEDYNKILPLSKIAAEP--DKINVELLWNKIKSSTTPIKTKLLDQELVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ A+++P + + L K+I+ K++ D+ + GG++L Y Sbjct: 172 IGNIYADEALYCAQVNPSTLAKDVSLK------TLDKIIKCAAKIMKDSFEKGGTTLFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +QN V+G C C I +I R T++C CQ Sbjct: 226 ESLNKQEGQYQNFLKVHGDRIRFC-PTCKSKIIKIKVNNRGTYFCPKCQ 273 >gi|315646600|ref|ZP_07899718.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] gi|315278243|gb|EFU41563.1| formamidopyrimidine-DNA glycosylase [Paenibacillus vortex V453] Length = 272 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +T++ ++R+ F++ +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSIVNVPITNVVVNREKSLNVPVDEFTSVLKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + +P P+ V I+ + +V+Y Sbjct: 61 VFHLHNGGRLLLHLMLGGILYLGRIDEERP---PRSTQVEITFGD-------QVLYFIGL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 111 RLGYLHFLTAKEADD--ALKELGPELLDRRMTKARFVQLIGKRRGALKTTLVNQQVVAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P+ K + L + + L +L KV+ +A D GG + Sbjct: 169 GNCYADEIAFDARIHPLTKIQDLSEQS------LEQLYDSTVKVMNEATDGGGYMEMPFQ 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + R F+C +CQ Sbjct: 223 EGDQLTGAYNDECKVYDREGEPCV-RCGTAIAKAEHTSRKVFFCPHCQ 269 >gi|239637990|ref|ZP_04678951.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] gi|239596553|gb|EEQ79089.1| formamidopyrimidine-DNA glycosylase [Staphylococcus warneri L37603] Length = 290 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 140/306 (45%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + N T+ I ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPYAINTTINKITFSENVKKGKEDNRETIIKGMTLDSFQRLTEGYT 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I + RR+KY++ + + +I HLGM+G F + + N +H V L N Sbjct: 61 ITKIERRSKYIVFYINRDSEQRILISHLGMAGGFFVVDHLEQITVPNYRKHWQVIFELDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 ++IY+D RRFG ++ S YP ++ PEP D +L T++ + Sbjct: 121 GK-----KLIYSDIRRFG--EIRNVSSFDAYPSFLSIAPEPFDEDAMQHFLDITNKKNYA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ K+++G GNIY CEAL+RA + P R T+ L Q + ++ Sbjct: 174 KKPIKQVILDHKVISGCGNIYACEALFRAGILPSRLTQDLTQQEKEM------VFYHVRS 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + CG I V A R++ Y Sbjct: 228 VLNEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKVCGHSIETKVIASRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPTCQK 290 >gi|257482980|ref|ZP_05637021.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 231 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 85/249 (34%), Positives = 129/249 (51%), Gaps = 18/249 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAKYL Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDIRLSGQRIVQVDRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+ E ++I HLGMSG+ + +H HV I L + + Y DPR Sbjct: 61 LIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG M + + + L LGPEP + F+ L + K+ +K +++ +V G+ Sbjct: 111 RFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVVVGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EAL+ A + P R+ + + KL EI+++L AI+ GG++LRD++ Sbjct: 169 GNIYATEALFAAGIDPRREAGGVSRAR------YLKLAIEIKRILTYAIERGGTTLRDFI 222 Query: 241 HIDGSIGYF 249 DG GYF Sbjct: 223 GGDGKPGYF 231 >gi|325963728|ref|YP_004241634.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469815|gb|ADX73500.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 321 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 49/325 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+ + + +R F+ G + D+ RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTIEAVEVLDPRSIRRHALGAEDFTGNLEGATVADIVRRG 60 Query: 58 KYLLIELEGN--------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 K+L + L ++++ HLGMSG +++ + + +H V L Sbjct: 61 KFLWMPLVHPAAAAEGQGSIGRPEVALMAHLGMSGQLLMQDRG----VPDEKHLKVRFRL 116 Query: 104 TNNTNTKKYRVIYNDPRRFG---FMDLVETS-------LKYQYPPLR----TLGPEPADN 149 + + ++ + D R FG LV T + Q P + + +P D Sbjct: 117 SPREGMPE-QLRFVDQRIFGGLFVTSLVPTDDGGPGGLAESQLPLIAEEASHIARDPLDP 175 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 +F+ + K+ + LK ALL+Q +V+GIGNIY EALWRA+L R T +L ++ Sbjct: 176 AFSFELFYRRLRKRKTGLKRALLDQGLVSGIGNIYADEALWRARLHFARPTDTLRRSEA- 234 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ G+PC C Sbjct: 235 -----ERVVDSAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGREGQPC-KRCA 288 Query: 269 -----QMIRRIVQAGRSTFYCTYCQ 288 IRR RS+ C CQ Sbjct: 289 AAGIHATIRRDQFMNRSSHTCPVCQ 313 >gi|297571638|ref|YP_003697412.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] gi|296931985|gb|ADH92793.1| formamidopyrimidine-DNA glycosylase [Arcanobacterium haemolyticum DSM 20595] Length = 284 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 134/303 (44%), Gaps = 36/303 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L+ + T+ L + G I V RR KYL Sbjct: 1 MPELPEVETVRAGLVPHVVGKTIERADLLHSRVARMSEFGL-EPVVGATISAVVRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E +++ HLGMSG F I S +H I T+ T + + D R Sbjct: 60 WMVTEAG-ALVAHLGMSGQFRINSNS--------KHLRARIHFTDGT-----ALDFVDQR 105 Query: 121 RFGFMD---LVET----------SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 FG + LV T L +G + D + + Q + + + Sbjct: 106 TFGHLHPDRLVATGDGGPGGMGSDLALIPQSAAHIGRDLLDPHCDIYSVARQVKRGRTEI 165 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K +LNQ I +GIGNIY EALW A++ P + T ++ + + + + V+ Sbjct: 166 KRVMLNQNIASGIGNIYADEALWEARVHPKKITSAMTLTQ------IRDVYEAARDVMAA 219 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ GG+S YV+++G GYF + +VYGKTG C CG I R+V RS+ C Sbjct: 220 ALAVGGTSFDSLYVNVNGESGYFDRSLNVYGKTGCAC-ERCGTQIERLVFMNRSSHVCPA 278 Query: 287 CQK 289 CQ+ Sbjct: 279 CQR 281 >gi|294660325|ref|NP_853016.2| formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284811982|gb|AAP56584.2| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284930494|gb|ADC30433.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(high)] Length = 274 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L + N + ++ + K L+ F + +D+ R KY Sbjct: 1 MPELPEVQTVINYLKTKIINQKINNVIVSALKVLKNATAKEFKKFLVNEHFVDIKRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + I S K + +H V L + + + Y+D Sbjct: 61 IIFILSNNKVLVSHLRMEGKYKI---SQFKAKYDERHVLVRFILDD------FELHYHDT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG + L+ L +P ++ YL + K + +K+ LL+Q +VAG Sbjct: 112 RRFGTFHIHSVLDYQDQDYLKKLAIDPTQQEWDWKYLKNNAQKSSRVIKSVLLDQSVVAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P +K L ++ + KVL+ AI+ G+++ Y Sbjct: 172 IGNIYADEILFLSKINPAKKANELTDQQ------FKEISKNATKVLLKAIELNGTTIFSY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +Q+ +V+ + +PC CG ++++ R T+YC CQK Sbjct: 226 QFKENHAGSYQDYLNVHLQKDKPC-KVCGNLVKKTKLNNRGTYYCAKCQK 274 >gi|299139806|ref|ZP_07032978.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] gi|298598160|gb|EFI54326.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX8] Length = 295 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 143/318 (44%), Gaps = 52/318 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + ++ + + K F P G KI V R K Sbjct: 1 MPELPEVETVANGVDARVRGQRIVSVWTSGKPQTFKSPETEIVETLTGTKIEKVRRVGKT 60 Query: 60 LLIELEGNLS----------------------------IIVHLGMSGSFIIEHTSCAKPI 91 ++++L + +VHLGM+G ++ + Sbjct: 61 IVMDLVRGGAAGKQIPSGNDNKKSKDKDKDAGTKDTAQFLVHLGMTGRLLVSQAE----V 116 Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 P H H ++L + V + DPRRFG + +V T Y P G EP + Sbjct: 117 PLPPHTHAVLALADGRE-----VRFVDPRRFGRLSVVTTEEGYTGP-----GVEPT--TV 164 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 + F + +K ALLNQ I+ G+GNIY E+L+RA + P ++ L + Sbjct: 165 SEEEFAGLFKGRKLAIKAALLNQSILHGVGNIYADESLFRAGIRPRKQAGKLTRAE---- 220 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 L +L + +Q+VL AI GGSS+ DYV DG G+FQ VY + GE C +CG + Sbjct: 221 --LGRLHEALQQVLAHAIKLGGSSVSDYVDADGVRGFFQLEHKVYSRAGEDC-KDCGAGL 277 Query: 272 RRIVQAGRSTFYCTYCQK 289 ++IV GR+T YC CQ+ Sbjct: 278 KKIVVGGRTTVYCPTCQR 295 >gi|289667980|ref|ZP_06489055.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 227 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 18/245 (7%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G I +V RRAKYLLI+ + S ++HLGMSGS + H+HV ISL Sbjct: 1 MPGAIITNVRRRAKYLLIDTDAGGSALLHLGMSGSLRVLPGDTLPRS----HDHVDISLQ 56 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 N + +NDPRRFG L+ S + L LGPEP ++F YL + + Sbjct: 57 NGRVLR-----FNDPRRFGC--LLWQSDTQAHELLAALGPEPLSDAFTGDYLHALAYGRR 109 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +K L++Q +V G+GNIY E+L RA +SP+R+ + D +L ++ + Sbjct: 110 AAVKTFLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVS------LDRYRRLADAVKDI 163 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L AI GG++LRD++ DG+ GYF+ +VYG+ GEPC CG++++ R+T +C Sbjct: 164 LAYAIQRGGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRLLKHATIGQRATVWC 222 Query: 285 TYCQK 289 CQ+ Sbjct: 223 GSCQR 227 >gi|213418642|ref|ZP_03351708.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 250 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 128/254 (50%), Gaps = 19/254 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I ++ + +H+HV + ++N + Y DPR Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKILR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++L+D+ Sbjct: 168 GNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTTLKDFC 221 Query: 241 HIDGSIGYFQNAFS 254 GS + Sbjct: 222 KAMGSRAILPRSCR 235 >gi|299535475|ref|ZP_07048797.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] gi|298729236|gb|EFI69789.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus fusiformis ZC1] Length = 290 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 33/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + ++ P F + Sbjct: 1 MPELPEVEGVVQALKPTVEGRTIQQVKLSERVHFSFSEGKQCIVKQAEPDAFESTLSQMT 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTN 105 I + RRAKY+ L + ++ HLGM+G++ + ++ K +H H T + + Sbjct: 61 ITRIERRAKYIFFHLLKDDVPYVLVSHLGMTGAWFVVNSPEEINEAKFQKHIHATFEMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKK 163 +IY+D RRFG + + T ++ PL + PEP D ++T + Sbjct: 121 GGY-----LIYSDIRRFGELRFLTT--IEEHAPLTKMAPEPFDEHACDFFITKSKLPKYE 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +++ ++++G GNIY EAL+ K+ P RK L + L +EI Sbjct: 174 NKAVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMSRLSEKRK------RALFEEIVA 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR++ Y Sbjct: 228 VLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKVCP---ACETATSQMTIGGRTSVY 284 Query: 284 CTYCQ 288 C CQ Sbjct: 285 CPNCQ 289 >gi|261406219|ref|YP_003242460.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] gi|261282682|gb|ACX64653.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. Y412MC10] Length = 273 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + N+ +TD+ ++R+ F++A +G K+I V RR K+L Sbjct: 1 MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +++HL + G + + + + V I+ + +V+Y Sbjct: 61 IFHLHNGGRLLLHLMLGGILYLGRRDDEE--RPSRSTQVEITFGD-------QVLYFIGL 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + L+ LGPE D K+ LK L+NQ++VAGI Sbjct: 112 RLGYLHFLTARETEN--ALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGI 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A++ P L + P++ L +L KV+ +A D GG + Sbjct: 170 GNCYADEIAFDARIHP------LSKIQDLPEESLEQLYDSTVKVMHEATDGGGYMEMPFQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + + VY + GEPC+ CG I + A R F+C CQ Sbjct: 224 EGDVLTGAYNDECKVYDREGEPCV-RCGTPIVKAEHASRKVFFCPNCQ 270 >gi|300741696|ref|ZP_07071717.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380881|gb|EFJ77443.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 331 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 88/334 (26%), Positives = 144/334 (43%), Gaps = 56/334 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + L +++R F+ G +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVHILDERSIRRHIGGSADFTMRLEGTRIRGAYRRG 60 Query: 58 KYLLIELEG-----------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + L ++++HLGMSG +++ +H + Sbjct: 61 KYMWLTLSASDDEPSPKPGDSDDTLLPYALVIHLGMSGQLLVKTPE----FPAEKHLKIV 116 Query: 101 ISLT--NNTNTKKYRVIYNDPRRFGFMDLVE-----------------TSLKYQYPPLRT 141 + L N+ K + + D R FG M L E + Sbjct: 117 LELEPANDDIGKTIELRFVDQRIFGGMFLSEVVPGIPAGASLAGAEEIPEELLVPEAVEH 176 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 +G +P D F+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + + Sbjct: 177 IGRDPVDPYFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAKPAK 236 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTG 260 SL +L + +VL +A+ AGG+S YV+++G GYF + + YG+ G Sbjct: 237 SLSAAQT------RELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYGRAG 290 Query: 261 EPCLSNC-----GQMIRRIVQAGRSTFYCTYCQK 289 EPC C +I R RS++ C +CQ+ Sbjct: 291 EPC-RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 323 >gi|221633868|ref|YP_002523094.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] gi|254789452|sp|B9L1Z5|FPG_THERP RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221156330|gb|ACM05457.1| formamidopyrimidine-DNA glycosylase [Thermomicrobium roseum DSM 5159] Length = 289 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 24/299 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE IRR L V+ V H +++ D F+ R +I+ + RR K Sbjct: 1 MPELPEVETIRRTLAPVLIGALVIGALRGEHPEDILLDPWPVFARRVRRHRIVALERRGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK-------- 110 YL E +++HLGM+G + H + A +H H+ + L + Sbjct: 61 YLAARFEDGDRLVIHLGMTGELRLSHPATA----PGKHCHLALVLRSLRPLPPSLVDQRQ 116 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 ++ + Y D RRFG + L++ + + LGPEP D + + L + ++ + +K A Sbjct: 117 RFLLRYLDIRRFGRIALLDQAGWETFT--ARLGPEPLDPTLDPRALWSRLRERRTAIKAA 174 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q ++AGIGNIY EAL++A+L P R+ ++L D + +L+ ++ VL AI+ Sbjct: 175 LLDQALLAGIGNIYADEALFQARLHPARRCQTLS------LDEVERLLVALRTVLSAAIE 228 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+++RDY G G FQ+ VYGK G PC CG + RI AGRS+ +C CQ Sbjct: 229 NAGTTIRDYRDGQGRAGSFQSRLQVYGKPAGTPC-PRCGTGLARIRIAGRSSVFCPRCQ 286 >gi|162447217|ref|YP_001620349.1| bifunctional formamidopyrimidine-DNA glycosylase/dephospho-CoA kinase [Acholeplasma laidlawii PG-8A] gi|161985324|gb|ABX80973.1| bipartite protein: formamidopyrimidine-DNA glycosylase and dephospho-CoA kinase domains [Acholeplasma laidlawii PG-8A] Length = 452 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE IRRNL V++ + ++ ++ + + + F +G++I V R AKYL Sbjct: 1 MPELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSND-ASFETKLKGQRIHKVEREAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++ HL M G + ++ +H HV +L++ + Y D R Sbjct: 60 KFILD-DYLLVSHLRMEGKYFMDAPLN-------KHIHVVFNLSSGHT-----LSYEDTR 106 Query: 121 RFGFMDLVETSLKYQY-PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG +LV+ K Y ++ L +P ++ + F++++ +K LL+Q I+ G Sbjct: 107 KFGRFELVDIKYKDTYLKDIKGLAKDP--DTLDLNTFYSSFNQRSKTIKEILLDQSIIGG 164 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P +K + KD L+ VL AI+ GG+++ + Sbjct: 165 IGNIYANEILYLSKIHPAKKGFLIS------KDEAKTLLNNSNLVLNKAIEMGGTTIDTF 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G FQ +V+GKTGE C CG I + GR T+ C CQ Sbjct: 219 ESL-GHKGEFQQELNVHGKTGEIC-KVCGTKIIKFQLKGRGTYICPKCQ 265 >gi|218962135|ref|YP_001741910.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] gi|167730792|emb|CAO81704.1| putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Candidatus Cloacamonas acidaminovorans] Length = 267 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 158/294 (53%), Gaps = 32/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHH--FSAATRGKKIIDVSRR 56 MPELPEV+ I +L V+K T+ I + P F + + + RR Sbjct: 1 MPELPEVQSIINDLEKVLKGKTIKTIECYYSGTVITNCLPEDNPFPSRA-----LAIKRR 55 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY++I LE + ++I+HL M+G I T C +P+ ++ I L NN + + Sbjct: 56 GKYIIIMLERDNALIIHLRMTGKL-IYDTFCGEPL---KYERARIILENNEV-----LHF 106 Query: 117 NDPRRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R FG + + + ++++ PP LG EP + F L + H K + +K AL++QK Sbjct: 107 IDIRTFGKIVICSQKNIEHCLPP---LGLEPFSDDFTPKALKEKMHGKKAPIKIALMDQK 163 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I+AG+GNIYVCE L+RA ++P + + + N + K+IQ+ ++VL +AID GG+S Sbjct: 164 IIAGLGNIYVCEILYRAGINPEKPANKITRKN------IVKIIQQTKEVLTEAIDKGGTS 217 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DY ID G FQN VY K + C G + R+ Q GRSTFYC CQK Sbjct: 218 ISDYRRIDDKPGSFQNFLQVYQK--QFCPL--GHKVLRLKQGGRSTFYCPICQK 267 >gi|148272539|ref|YP_001222100.1| formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830469|emb|CAN01404.1| fpgA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 311 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 27/308 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHH--FSAATRGKKIIDVSRRA 57 MPELPEVE++R L + +T + + ++L+ P F G+ I RR Sbjct: 1 MPELPEVEVVRAGLEPAVAGARITGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG 60 Query: 58 KYLLIELE--------GNLSIIVHLGMSGSFIIEHTSCAKP--------IKNPQHNHVTI 101 K++ + LE G +++ HLGMSG ++ I++P H + + Sbjct: 61 KFMWLPLEPDPGRDATGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPVHGELVV 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 + + V P G + + + +P D +F+ L + Sbjct: 121 AFVDQRIFGSMAVDRLVPTPDGHAGGRGSDAASVPTQVAHIARDPLDPAFDDELLLDRLA 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + +K ALL+Q +V+GIGNIY EALW A++ T +L + +L+ E+ Sbjct: 181 RRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPTDALARGRAL------RLLAEV 234 Query: 222 QKVLIDAIDAGGSSLR-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 ++VL A+ GG+S YV+++G+ GYF ++ + YG+ G PC CG I R R Sbjct: 235 RQVLARALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGRPC-PRCGTPIVREAFMNRG 293 Query: 281 TFYCTYCQ 288 + C CQ Sbjct: 294 SHLCPRCQ 301 >gi|296130132|ref|YP_003637382.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] gi|296021947|gb|ADG75183.1| formamidopyrimidine-DNA glycosylase [Cellulomonas flavigena DSM 20109] Length = 324 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 149/319 (46%), Gaps = 47/319 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + TVTD+ + R ++R P F+A G+++ RR Sbjct: 1 MPELPEVETVRDGLARHVLGRTVTDVDVRRGYSVRRHDAGPLDFAARLVGRRLEAAVRRG 60 Query: 58 KYLLIELE-----GNLSIIVHLGMSGSFIIEHTSCAK---------------PIKNPQHN 97 K+L + L+ G+ +++ HLGMSG ++ + P +H Sbjct: 61 KFLWLLLDEGAGRGDDALMAHLGMSGQLLVRGPAAGPAALDDAPGDPVATSGPTGWVEHP 120 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGF---MDLVETSL----------KYQYPPLRTLGP 144 H+ + L + + + D R FG DLV T P+ + Sbjct: 121 HLRVRLRLDDG---SALDFVDQRTFGHLSVPDLVPTPDGAPGGLGSARPAVPAPVAHIAR 177 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + D + + + + + +K ALL+Q +V+G+GNIY EALWRA+L R T +L Sbjct: 178 DLLDPALDRDAVVAALRARRTEVKRALLDQTLVSGVGNIYADEALWRARLHGTRPTAALR 237 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 +++ +V+ +A+ GG+S YV ++G+ GYF + +VYG+ G PC Sbjct: 238 PVEA------RRVLDAAHEVMTEALGQGGTSFDALYVDVNGASGYFDRSLAVYGQDGRPC 291 Query: 264 LSNCGQMIRRIVQAGRSTF 282 CG +RR A RS++ Sbjct: 292 -RRCGTPVRRDAFANRSSY 309 >gi|325107647|ref|YP_004268715.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] gi|324967915|gb|ADY58693.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Planctomyces brasiliensis DSM 5305] Length = 279 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 126/295 (42%), Gaps = 22/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----HRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L + T G+ I V RR Sbjct: 1 MPELPEVETMVRGIRQAVAGTRLAAVDLCPCPRKPITLTPGIEELRDRTVGQTITAVERR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK +++ LE ++ M+G ++ +H+ I K+ + + Sbjct: 61 AKRVVLRLESEDCYVIEPRMTGLMLLADPPTI--------DHLRIHWQLRDGRKRRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L + L+ LGP+ D + +K ALL+QK+ Sbjct: 113 WDRRGLGTVRLYSPTEYEAALGLQKLGPDALD--MTPALWKDALQRTARPIKVALLDQKL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L +LSP +L + KL + +L AI GS+L Sbjct: 171 VAGIGNLYASEILHAIRLSPETPANTLTAGQ------IRKLHRSCLAILELAIQYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VYGKTGE C I RIVQA RSTFYC CQK Sbjct: 225 GDGTYRNALNKDGSYQNEHRVYGKTGETCPRCQKHSIERIVQAQRSTFYCPRCQK 279 >gi|295098756|emb|CBK87845.1| formamidopyrimidine-DNA glycosylase (fpg) [Eubacterium cylindroides T2-87] Length = 276 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 19/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K + D+ ++ L + F ++ + ++ D R KY Sbjct: 1 MPEAPEVQTVLSTLEHQIKGAKILDVKVYYPKLIQNLDVTEFVSSLKNQRFCDFFRIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L ++ +L +IVHL M G F I + + +H H L + + Y+D Sbjct: 61 LGFVMD-DLDLIVHLRMEGKFYILKELPS----DLKHIHCVTYLDDGR-----LLCYHDT 110 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L ++ + + +G + D + + + H N+K+ALL+Q I+A Sbjct: 111 RKFGRMALYPKAVDVRRLDCFKNVGYDCLDENLDGMTFYKIIHPLKRNIKSALLDQSIIA 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+ KL P + + + + + +I ++++ A+ AGG+++R Sbjct: 171 GVGNIYADEILFSCKLDPRSRCQKISKKD------CENIIYHTKRIIRGAMKAGGTTIRS 224 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ K EPC C I++IV + R T+ C+ CQK Sbjct: 225 YTSSLGVTGLFQLELKVHSKKDEPC-PVCKNKIKKIVVSQRGTYLCSNCQK 274 >gi|289550553|ref|YP_003471457.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] gi|289180085|gb|ADC87330.1| Formamidopyrimidine-DNA glycosylase [Staphylococcus lugdunensis HKU09-01] Length = 290 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 148/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G K Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+ I +E N +I HLGM+G F I + N +H HV L+N Sbjct: 61 IYKVERRSKYINIYIEKNQECRVLISHLGMAGGFFIVNHLDEIHAPNYRKHWHVIFHLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQFHKK 163 ++Y+D RRFG ++ Y + + PEP D S YLT +Q K Sbjct: 121 GK-----LLVYSDIRRFG--EIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQPKVK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K +L+ K++AG GNIY CEAL+RA + P + +SL Q L E+Q Sbjct: 174 HKPIKQLILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQN------LFLEVQA 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I+ GG+S+ DY H DG G Q +VY + + C CG I + V A R++ + Sbjct: 228 VLNEGIEYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|322437072|ref|YP_004219284.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] gi|321164799|gb|ADW70504.1| formamidopyrimidine-DNA glycosylase [Acidobacterium sp. MP5ACTX9] Length = 269 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 30/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEVE + + + + + K F P + G +I V R K Sbjct: 1 MPELPEVETVANGVHDRVHGQRIDSVWTSGKPQTFKSPETEIAEVLTGARIDRVRRIGKT 60 Query: 60 LLIEL--EGNLS--IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ +L + +VHLGM+G ++ H + P H H + L+ + Sbjct: 61 VVADLTRSSGETAQFLVHLGMTGRLLVSHPE----VPLPPHTHAVLGLSGGNELR----- 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D RRFG + +V + G EP + N F + +K ALLNQ Sbjct: 112 FVDARRFGRLSVV-------HEAYGGPGAEPL--TINEEDFIALFKGRKLAIKAALLNQS 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++ G+GNIY E+L+RAK+ P R+ L + D L +L + +VL AI GGSS Sbjct: 163 LLHGVGNIYADESLFRAKIRPRRQAGKLTR------DELKRLRTALIEVLRHAIKLGGSS 216 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + DYV DG G+FQ VYG+ GE C +CG +++I+ GR+T YC CQ Sbjct: 217 VSDYVDADGVRGFFQLEHKVYGRAGETC-KDCGTALKKIIVGGRTTVYCPTCQ 268 >gi|33567483|emb|CAE31396.1| formamidopyrimidine-DNA glycosylase [Bordetella bronchiseptica RB50] Length = 243 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 21/260 (8%) Query: 33 LRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK 92 +R+ P G+ +++ RR KYLL+ + + IVHLGMSGS + Sbjct: 1 MRWPIPPALPDLLAGRTVLECGRRGKYLLLRFDHGVQ-IVHLGMSGSLR----RVPEQEA 55 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVET--SLKYQYPPLRTLGPEPADNS 150 +H+HV + + +DPRRFG + +P L LG EP D Sbjct: 56 PRKHDHVDWVFDHAV------LRLHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPR 109 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ +L F + +K ALL V G+GNIY E+L+RA + P + + Sbjct: 110 FDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESLFRAGIDPRTAAQRVSAAR--- 166 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG-YFQNAFSVYGKTGEPCLSNCGQ 269 +L I+ L DA+D+GGS+LRDYV G G YF +VY + G PC CG Sbjct: 167 ---CDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAAVYERAGLPC-RVCGT 222 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 IRR+VQ R+T++C CQK Sbjct: 223 PIRRLVQGQRATYFCPSCQK 242 >gi|315658047|ref|ZP_07910920.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] gi|315496937|gb|EFU85259.1| DNA-formamidopyrimidine glycosylase [Staphylococcus lugdunensis M23590] Length = 290 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 103/306 (33%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-----------HHFSAATRGKK 49 MPELPEVE ++R + + N + + K + F T G K Sbjct: 1 MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY+ I +E N +I HLGM+G F I + N +H HV L+N Sbjct: 61 IYKVERRSKYINIYIEKNQERRVLISHLGMAGGFFIVNHLDEIYAPNYRKHWHVIFHLSN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT--HQFHKK 163 ++Y+D RRFG ++ Y + + PEP D S YLT +Q K Sbjct: 121 GK-----LLVYSDIRRFG--EIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQTKVK 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K +L+ K++AG GNIY CEAL+RA + P + +SL Q L E+Q Sbjct: 174 HKPIKQLILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQN------LFLEVQA 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + + C CG I + V A R++ + Sbjct: 228 VLNEGIKYGGTSISDYRHADGKTGTMQLRLNVYKQ--QQC-KKCGHKIEQQVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPVCQK 290 >gi|12045118|ref|NP_072929.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|2494593|sp|P55825|FPG_MYCGE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|3844857|gb|AAC71484.1| formamidopyrimidine-DNA glycosylase [Mycoplasma genitalium G37] gi|166078880|gb|ABY79498.1| formamidopyrimidine-DNA glycosylase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 284 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N + + ++ RK L+ P + + + D+ R+ KY Sbjct: 1 MPELPEVTTVINELKETVLNKPLDQVQVNLRKVLKNIDPQLLNKQLKNQFFTDIKRKGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E N +H V + + ++ Y+D Sbjct: 61 IIFLLSNGLYLVSHLRMEGKYFFEERGS---KFNQKHVLVEFHFDDGS-----QLNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L E Q L L +P + F+ + + +K +L+Q +++G Sbjct: 113 RQFGTFHLYEK--LEQAAQLNKLAFDPLEAGFDYRKIFQKAQNSKRKVKTFILDQTVISG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P L + L + K+L AI G+++ + Sbjct: 171 IGNIYADEILFASKINPETMVDQLTIKE------IEILCKNATKILAKAIVMKGTTISSF 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G +QN V+ K +PC S C Q+I + GR +++C CQK Sbjct: 225 SFKKDHTGGYQNFLKVHTKKDQPC-SVCNQLIVKKKINGRGSYFCLNCQK 273 >gi|54020255|ref|YP_116103.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 232] gi|53987428|gb|AAV27629.1| foramidopyrimidine DNA glycosylase [Mycoplasma hyopneumoniae 232] Length = 275 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVITVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + + + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTYKSP-----QWGKYDYISFVFSDNSV-----LNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDD--FYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L ++I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKAAKLISRKEA------ELIIDFSKKILQESIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|269978188|ref|ZP_06185138.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933697|gb|EEZ90281.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 306 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 35/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFP--HHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + N VT + H ++LRF F GK++ VSRR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQPGGFSRFHELLVGKRLESVSRR 64 Query: 57 AKYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L +EL GN + HLGMSG + A I H + +L N ++ Sbjct: 65 GKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LELV 115 Query: 116 YNDPRRFGFMDLVE-------------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + D R FG ++ T L + + D + + ++ + Sbjct: 116 FCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRS 175 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K LL+Q V+GIGNIY E L+ A + P ++L + L L++ Sbjct: 176 SRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLAKNLSGED------LRNLLEVAA 229 Query: 223 KVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V+ A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV GR+T Sbjct: 230 SVMRHALEFGGTSFDQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRAT 288 Query: 282 FYCTYC 287 +C +C Sbjct: 289 VFCAHC 294 >gi|251796642|ref|YP_003011373.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] gi|247544268|gb|ACT01287.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. JDR-2] Length = 271 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 126/289 (43%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L ++ +T + R F A G+ I V RR K+L Sbjct: 1 MPELPEMEHYRLRLSELIIGSPITGTEVTRDKSINISAEQFEAELVGRTIWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ +++HL + G+ ++ + + VTI +Y Sbjct: 61 LFHLDNGKRLVLHLMLGGTLFF----GSEEERPDRTVQVTIRFATGN-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ + S+K L LGP+P D +F+KK LK AL++Q +++GI Sbjct: 110 RLGYLHFM--SVKEADAKLSELGPDPFDKRLTLERFKARFNKKRGALKTALVDQHVLSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + AK+ P K SL + ++ + + VL +AI GG + Sbjct: 168 GNCYADEIAFAAKIRPDAKIPSLTD------ETWERVYESMHSVLKEAISKGGYMEQPLT 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC CG I + + R F C CQK Sbjct: 222 AGDAITGGYNDHCQVYDRGGEPCF-VCGTAIEQFEISSRKAFVCPVCQK 269 >gi|72080906|ref|YP_287964.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae 7448] gi|71914030|gb|AAZ53941.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae 7448] Length = 275 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + + + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTYKSP-----QWGKYDYISFVFSDNSV-----LNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDD--FYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L ++I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKAAKLISRKEA------ELIIYFSKKILQESIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|73662385|ref|YP_301166.1| formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494900|dbj|BAE18221.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 294 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK------NLRFDFP-----HHFSAATRGKK 49 MPELPEVE + R + +K + I K N R F TR Sbjct: 1 MPELPEVEHVTRGIKPFVKGQKIESILFSDKVQEGKANHRETIVKGMELDTFKRFTRLYT 60 Query: 50 IIDVSRRAKYLLIELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I+D+ RR+KY++ LE + +I HLGM+G F + + N +H HV L N Sbjct: 61 IVDIERRSKYIVFYLEKDGDKRILISHLGMAGGFFVVDKLEDISVPNYRKHWHVIFKLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK--K 163 + ++Y+D RRFG ++ + YP + PEP + A YL K + Sbjct: 121 DK-----LLVYSDIRRFG--EIRNVASFEAYPSFLEIAPEPFEKEAMAHYLAWFDKKLYQ 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ ++++G GNIY CEAL+R+ + P R + L L +++ Sbjct: 174 NKPIKQMILDHRVISGCGNIYACEALFRSGIHPARLPKDLNHQEREM------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL I GG+S+ DY H DGS G Q +VY + CG I V A R++ + Sbjct: 228 VLEAGIKYGGTSISDYRHADGSTGTMQQHLNVYK---QKVCKVCGDDIATQVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPTCQK 290 >gi|218678413|ref|ZP_03526310.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli CIAT 894] Length = 230 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 103/231 (44%), Positives = 137/231 (59%), Gaps = 10/231 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++R L M+ VT + L R +LRF FP + G+ I+ + RRAKYL Sbjct: 1 MPELPEVETVKRGLAPTMEGARVTRLELRRADLRFPFPDALADRVSGRIIVSLGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTNNTNTKKY 112 L++L+ ++I HLGMSGSF IE + A K+ +H+HV L + + Sbjct: 61 LVDLDDGNTLISHLGMSGSFRIEEGAGAATPGEFHHARSKDEKHDHVVFHLEGASGPR-- 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 RVIYNDPRRFGFMD+VE + +P R LGPEP N A YL +F K LK+ALL Sbjct: 119 RVIYNDPRRFGFMDMVERADLAAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALL 178 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +QK +AG+GNIYVCEALWR+ LSP + R ++ L L+ I+ Sbjct: 179 DQKNIAGLGNIYVCEALWRSHLSPGPRRRHAGDGGWPAEEQLNLLVAAIRD 229 >gi|323490454|ref|ZP_08095661.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] gi|323395858|gb|EGA88697.1| formamidopyrimidine-DNA glycosylase [Planococcus donghaensis MPA1U2] Length = 289 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 88/305 (28%), Positives = 147/305 (48%), Gaps = 32/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----------RKNLRFDFPHHFSAATRGKK 49 MPELPEVE + R + V + + + ++ F G + Sbjct: 1 MPELPEVEGVVRQIRPVSIGKKIEAVAVSDVIRLSKENGKEAIIKRIEADGFIKRLTGAQ 60 Query: 50 IIDVSRRAKYLLIEL--EGNLSIIVHLGMSG-SFIIEHTSCAKPIKNPQHNHVTISLTNN 106 I+ V RR+KY+ L + ++ HLGMSG F ++ K +H H+ ++L++ Sbjct: 61 IVRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYVDQLQSIPEDKFRRHVHIVLTLSSG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKKN 164 + ++D RRFG M +++ + +PPL + PEP S +L KN Sbjct: 121 N-----LLAFSDIRRFGEMRVLQ--EEGDFPPLLLMAPEPFHESALEHFLTMAESPKYKN 173 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++ +I++G GNIY EAL++ K+ P R + + +L + I + Sbjct: 174 KAIKEIIMDGQIISGCGNIYATEALFKMKIHPKRAASRISRKRKV------ELFESIVAI 227 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L ++I AGGS++ DY I+G G QN F +YGK + C +CG + + GR++ YC Sbjct: 228 LQESIRAGGSTISDYRDINGESGSMQNRFGMYGK--KQCA-DCGTATKTLKIGGRASVYC 284 Query: 285 TYCQK 289 CQK Sbjct: 285 PTCQK 289 >gi|71893928|ref|YP_279374.1| formamidopyrimidine-DNA glycosylase [Mycoplasma hyopneumoniae J] gi|71852055|gb|AAZ44663.1| foramidopyrimidine DNA gycosylase [Mycoplasma hyopneumoniae J] Length = 275 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 20/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + + ++ N + F + IID+ RAK+ Sbjct: 1 MPELPEVVTVVNALKTEVIGKKIKNVLARDSNFIKEINFFDFQKSIVNATIIDIQNRAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +LI L+ I+ HL M+G + + + ++++++ ++N+ + YND Sbjct: 61 ILIFLDNRKVILSHLRMNGKYFTYKSP-----QWGKYDYISFVFSDNSV-----LNYNDS 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + L ++ PL+ L PEP + + K ++K LL+QKI++G Sbjct: 111 RKFGTFMIRDVELLFKTKPLKDLAPEPFFIKVDD--FYQKIRKSTRSIKAILLDQKIISG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E + K+ P + + + + +I +K+L +I GGSS+ Y Sbjct: 169 LGNIYADEVCFATKIFPGKTAKLISRKEA------ELIIYFSKKILQQSIKLGGSSISSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 223 TSLNAKEGKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 271 >gi|223044143|ref|ZP_03614182.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] gi|222442537|gb|EEE48643.1| formamidopyrimidine-DNA glycosylase [Staphylococcus capitis SK14] Length = 290 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELDSFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +E + +I HLGM+G F + N +H V L N Sbjct: 61 ISEVLRRSKYIVFHIEKDNDHRILISHLGMAGGFFVVDDLEEIGTPNYRKHWQVIFELNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 +++Y+D RRFG ++ + YPP + PEP D YL Sbjct: 121 GK-----KLVYSDIRRFG--EIRNIANYESYPPFLEIAPEPFDKEAMIHYLSCFDINKYA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+R + P + SL L +++ Sbjct: 174 NKPIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQKEM------LFYYVRE 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + CG I V A R++ + Sbjct: 228 VLEEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKTCGHEIETKVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPNCQK 290 >gi|330685708|gb|EGG97347.1| DNA-formamidopyrimidine glycosylase [Staphylococcus epidermidis VCU121] Length = 290 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 140/306 (45%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + N T+ I ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFAVNTTINKITFSENVKKGKEDGRETIIKGMTLESFRRLTEGYT 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I + RR+KY++ + + +I HLGM+G F + + + N +H V L N Sbjct: 61 INQIERRSKYIVFYINRDAEQRILISHLGMAGGFFVVNHLEEINVPNYRKHWQVIFELDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 ++IY+D RRFG ++ S YP ++ PEP D +L T++ + Sbjct: 121 GK-----KLIYSDIRRFG--EIRNVSSFDSYPSFLSIAPEPFDEEALQHFLDCTNKKNYS 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K +L+ K+++G GNIY CEAL+RA + P R T+ L + ++ Sbjct: 174 KKPIKQVILDHKVISGCGNIYACEALFRAGILPNRLTQELSNQEKEM------VFYHVRS 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GG+S+ DY H DG G Q +VY + CG I V A R++ Y Sbjct: 228 VLNEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKVCGHSIETQVIASRNSHY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPTCQK 290 >gi|332528609|ref|ZP_08404591.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] gi|332041925|gb|EGI78269.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Hylemonella gracilis ATCC 19624] Length = 275 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 140/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + + + + LR+ A G+++ V RR KYL Sbjct: 1 MPELPEVEATRLSFADHIADARIVSAWQGLP-LRWPL-GIAPAQLVGRRVRGVRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ + +++HLGMSGS + H+H + T + + NDPR Sbjct: 59 LLDLDEGM-LLLHLGMSGSLSFTDVAVHGTRPRGAHDHFDL------QTDRGLLRLNDPR 111 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + E+ L LG EP D SF A K+ S +K LL +V G Sbjct: 112 RFGAVVWAESEQAPIARKLLDGLGVEPLDESFEADAFHAALKKRRSAIKQVLLAGDVVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + + +L I+ VL A+ AGG++LR+Y Sbjct: 172 VGNIYASEALFIAGIRPSLSAARISKPRA------ERLHAAIRDVLGRALAAGGTTLRNY 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G FQ VYG+ G PC + CG I+ + Q R+T+YC +CQK Sbjct: 226 SNAVGERGNFQFEAKVYGREGLPC-TVCGHPIKLMRQGQRATYYCVHCQK 274 >gi|56750239|ref|YP_170940.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] gi|56685198|dbj|BAD78420.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 6301] Length = 239 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 116/251 (46%), Gaps = 22/251 (8%) Query: 44 ATRGKKIIDVSRRAKYLLIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 A + +I + RR KYLL +L + VHL M+G F + +H V Sbjct: 2 ALQQTQIQEWRRRGKYLLADLSREGEPAGTWGVHLRMTGQFFWTEPATPLT----KHTRV 57 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLT 157 + + + + D R FG M V + L LGPEP F A YL Sbjct: 58 RLRFEGDRELR-----FIDIRSFGQMWWVPPDRPVESVITGLSKLGPEPFAPEFTARYLR 112 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 + + +K ALL+Q +VAGIGNIY E+L+R + P + L + KL Sbjct: 113 DRLRRSQRPIKTALLDQSLVAGIGNIYADESLFRTGIHPTTPSDRLTKIQA------EKL 166 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 + I +VL +I AGG++ D+ + G G + VYG+ +PC CG I+++ A Sbjct: 167 REAIVEVLTASIGAGGTTFSDFRDLTGVNGNYGGQAWVYGRKDQPC-RTCGTPIQKLKLA 225 Query: 278 GRSTFYCTYCQ 288 GRS+ +C CQ Sbjct: 226 GRSSHFCPRCQ 236 >gi|281356218|ref|ZP_06242711.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] gi|281317587|gb|EFB01608.1| formamidopyrimidine-DNA glycosylase [Victivallis vadensis ATCC BAA-548] Length = 274 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 153/290 (52%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E I R L + + + + +R SA G++IIDV RRA+Y+ Sbjct: 1 MPELPEAENIGRALKRALVERRIVKVEVFTPAMREPLTPLLSAGLEGRRIIDVRRRARYV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++EL+ +++H GMSG +E + +H HV + L + + R Sbjct: 61 VVELDDGRGLLMHFGMSGVVRVESPEVPR----RKHEHVFLHLDDGR-----AFRFECTR 111 Query: 121 RFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RF + + E +P L LG EP ++FN YL + + +KN ++N +IV G Sbjct: 112 RFSVLKVCELPRPGGWPSELDALGVEPLTDAFNGNYLYEKSRGRTGCVKNFIMNNEIVVG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++SP+R+T S+ + + ++ + +++L AI+ GG+S+ D+ Sbjct: 172 IGNIYATETLYASEVSPLRETGSVTREECS------RIAECAKRILARAIELGGTSISDF 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +++DGS G F +VYG+ G+ C CG+ I GRS+ +C CQK Sbjct: 226 LNVDGSEGKFALELAVYGRKGQAC-PKCGERIEMRKLGGRSSCFCPVCQK 274 >gi|307700916|ref|ZP_07637941.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] gi|307613911|gb|EFN93155.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris FB024-16] Length = 306 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 95/306 (31%), Positives = 141/306 (46%), Gaps = 35/306 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFP--HHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + N VT + H ++LRF F GK++ VSRR Sbjct: 5 MPELPEVETIRRNLSSHLLNTCVTAVSAPTHPRSLRFQPGGFSRFHELLVGKRLESVSRR 64 Query: 57 AKYLLIELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 K+L +EL GN + HLGMSG + A I H + +L N ++ Sbjct: 65 GKFLWLELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LELV 115 Query: 116 YNDPRRFGFMDLVE-------------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + D R FG ++ T L + + D + + ++ + Sbjct: 116 FCDQRTFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRS 175 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +K LL+Q V+GIGNIY E L+ A + P R+L + L L++ Sbjct: 176 SRRAIKTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGED------LRNLLEVAA 229 Query: 223 KVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V+ A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV GR+T Sbjct: 230 SVMRHALEFGGTSFDQLYVDSWGNPGDFASELLVYGRGGQAC-HQCGQALDKIVLDGRAT 288 Query: 282 FYCTYC 287 +C +C Sbjct: 289 VFCAHC 294 >gi|269115161|ref|YP_003302924.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis] gi|118406894|gb|AAO39419.2| foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] gi|268322786|emb|CAX37521.1| Foramidopyrimidine-DNA glycosylase [Mycoplasma hominis ATCC 23114] Length = 275 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ + L + N +T++ +++ + +F P +F + R KKI + K+ Sbjct: 1 MPELPEVRVVVKALNNTILNKKITNLIIYKPKIFKEFSPQYFISILRDKKIEKIDNIGKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + P + +H ++N+ + + D Sbjct: 61 IIFFLSEKLVLLSHLRMEGKYRYY---LNPPKEIDKHLVARFVFSDNSE-----LHFLDK 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG L + PP+ LGPEP + L + +K LL+Q VAG Sbjct: 113 RLFGTYMLRNLENYNKIPPISLLGPEP--KDIDIEALFKKIKNSKMPIKTKLLDQSFVAG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY EAL+ +K+ P+ K L L +I+ +++ + + GG++L Y Sbjct: 171 IGNIYADEALFASKIHPLSKASDLSLEQ------LKDIIKNANEIMEKSYELGGTTLFSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G +Q+ +++ + + C CGQ ++ R T+ C CQK Sbjct: 225 ESLNKQEGKYQDFLNIHSDSIKKC-KVCGQKTLKLKVNQRGTYVCPNCQK 273 >gi|70726236|ref|YP_253150.1| hypothetical protein SH1235 [Staphylococcus haemolyticus JCSC1435] gi|68446960|dbj|BAE04544.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 290 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 35/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSA--ATRGKK------- 49 MPELPEVE ++R + + N T+ + K + + G + Sbjct: 1 MPELPEVEHVKRGIEPYILNATIKSVTFSNKVIEGKQQGKETIIKGINLDGFRLNSESFK 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I + RR+KY++ +E N I+ HLGM+G F I N +H HV L N Sbjct: 61 IKSIDRRSKYIVFTIEKNNNQRIILSHLGMAGGFFIVDKLSDISTPNYRKHWHVVFHLDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-- 163 +++Y+D RRFG +L + YP + PEP D++ Y + K Sbjct: 121 GK-----QLVYSDIRRFG--ELRNLATYNDYPAFLEIAPEPFDDNA-LNYFLDRIKLKKY 172 Query: 164 -NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 N +K LL+ K++AG GNIY CEAL+RA + P RK + + L +Q Sbjct: 173 QNKPIKQMLLDHKMIAGCGNIYACEALFRAGVLPERKVKDVSNQERQM------LFYYVQ 226 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 +VL + I+ GG+S+ DY H DG G Q +VY + CG I + V A R++ Sbjct: 227 EVLNEGINNGGTSISDYRHADGKTGEMQLHLNVYK---QKTCKICGHDIEQKVIASRNSH 283 Query: 283 YCTYCQK 289 +C +CQK Sbjct: 284 FCPHCQK 290 >gi|218282128|ref|ZP_03488427.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] gi|218216921|gb|EEC90459.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] Length = 273 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPE PEV+ + L +K++++ D+ ++ + + F G+ +R KY Sbjct: 1 MPEAPEVQTVLSTLETQIKDISIEDVLIYYPKIVDNVEVETFKHRLIGQSFRTFNRLGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ L+ + ++VHL M G F + C +H HV L N Y+D Sbjct: 61 LIFGLD-DYDLVVHLRMEGKFYLYDKICED-----KHIHVVFKLNNGICMS-----YHDT 109 Query: 120 RRFGFMDLVETSLK-YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M L + YP + +G + D + +Y H H NLK+ LL+Q I+A Sbjct: 110 RKFGRMYLYSKKEDIHAYPCFKNVGYDYMDQRVDGMYFYHCIHTLKRNLKSCLLDQSIMA 169 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E + L P + L + + K++ E +++L A GG+++R Sbjct: 170 GIGNIYADEICFALGLDPRSRACKLSKKD------CDKIVLETRRILQGATHYGGTTIRS 223 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G G FQ V+ +T C I++I + R T+ C CQK Sbjct: 224 YTSSLGVTGRFQLHLKVHDQTQ---CKVCHHAIKKITVSQRGTYLCPKCQK 271 >gi|269957059|ref|YP_003326848.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269305740|gb|ACZ31290.1| formamidopyrimidine-DNA glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 339 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 87/340 (25%), Positives = 140/340 (41%), Gaps = 63/340 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V ++ + R ++R P F++ G + +RR Sbjct: 1 MPELPEVETVRDGLARHVVGARVREVEVLRDYSVRRQDGGPSAFASLIEGATLTAAARRG 60 Query: 58 KYLLIEL--------------------------EGNLS----IIVHLGMSGSFIIEHTSC 87 K+L + L + + ++ HLGMSG ++ Sbjct: 61 KFLWLPLAAAPVVEPVETTPLDPAGVVSTGSTTDAGSTTRTALLAHLGMSGQLLVRD--- 117 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-------------TSLKY 134 + H V + LT T + + D R FG + +V T Sbjct: 118 GRDPWAHPHLRVRLHLT-GAPTGATALDFVDQRTFGHLAVVGLVPTPDGAPGGLGTDEPA 176 Query: 135 QYPPLRTLGPEPADNSFNA-----IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 P+ + + D + ++ + +K ALL+Q +V+GIGNIY EAL Sbjct: 177 VPGPVAHIARDLLDPELAPGTPGRAAVIAAVRRRRTGIKRALLDQTLVSGIGNIYADEAL 236 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGY 248 WRA++ R T L + +++ + V+ +A+ GG+S YV+++G GY Sbjct: 237 WRARVHYARATDVLRPVE------VARVLDAAEDVMREALAVGGTSFDTLYVNVNGESGY 290 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F + YG+ GEPC CG I R RS +C CQ Sbjct: 291 FARGLAAYGRAGEPC-PRCGTPIVRDTFMNRSAHWCPRCQ 329 >gi|291320264|ref|YP_003515525.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] gi|290752596|emb|CBH40568.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae] Length = 279 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N T+T++ + K ++ P+ F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKSNILNSTITNVIVKLDKLIKNATPNEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + K +H+++ L N + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYF----TDISINKTRKHDYIIFELDN-----QMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+SP KT + P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKISPWTKTNKI------PYEKFKEMLSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ +T PC C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRTNMPCNK-CNALIQQEFIAQRMTYYCPICQK 272 >gi|212703530|ref|ZP_03311658.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] gi|212673030|gb|EEB33513.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] Length = 286 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 25/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + + + R+ G +I V RR K Sbjct: 5 MPELPEVETVVRTLRPQVLDCCIERVDVFRERSLHPLSLP-VERLAGTRISAVRRRGKLA 63 Query: 61 LIELEGNLS---------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L+ELE + + VHL M+G F++ A +H + L + Sbjct: 64 LLELEPPAAAAAVPVPSLLAVHLRMTGRFMVHPEGAA----PLKHTRIIFHLRRLDGIRA 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ ++D R FG + L ++ +LGPEP + L + H + +K AL Sbjct: 120 -QLFFDDVRSFGLVFAATPELLDRWDFWCSLGPEPLE--LGPGELGPRLHGR-RAIKAAL 175 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q ++AGIGNIY E+L+RA + P R L + +L +Q+VL ++I Sbjct: 176 LDQTVLAGIGNIYADESLFRAGIDPRRPAGELSEAEA------ERLRIALQEVLRESIAQ 229 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GSS+RDY +G++G FQN F VYG+ G+ C CG + + GR+T +C CQ Sbjct: 230 CGSSIRDYRDANGNVGAFQNTFFVYGRGGQAC-RRCGTELEKSRIGGRATVFCPQCQ 285 >gi|304404451|ref|ZP_07386112.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] gi|304346258|gb|EFM12091.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] Length = 271 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + T+T + R+ P F A G+ + V RR K+L Sbjct: 1 MPELPEMETYRNMLSERIAGRTITAASVTREKTVNLNPDEFVQALIGRVVWFVERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ I++HL + GS + + V +S + ++ Sbjct: 61 LLHLDDGRRIVIHLMLGGSLYYGDEED----RPDRTVQVELSFGAHK-------LFGIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ K LGPEP D F K LK++L++Q +AGI Sbjct: 110 RLGYVHLLT--AKEAIERFEELGPEPLDPRLTVDKFKLLFKGKRGALKSSLVDQHTIAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P + +L +L + +Q VL +A GG + Sbjct: 168 GNCYADEICFVASIRPSTRIPALKDEE------WERLFRAMQSVLREATANGGYMEDPFY 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GEPC + CG I + + + FYC CQ Sbjct: 222 KGDTLTGGFNSLCRVYDRGGEPC-TQCGTAIVQAEVSSKKVFYCPSCQ 268 >gi|314933843|ref|ZP_07841208.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] gi|313653993|gb|EFS17750.1| DNA-formamidopyrimidine glycosylase [Staphylococcus caprae C87] Length = 290 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 139/306 (45%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFVINEKIDKVIFSEKVIEGKNNQRETIIKGIELDSFKKLTEGYV 60 Query: 50 IIDVSRRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I +V RR+KY++ +E + +I HLGM+G F + N +H V L N Sbjct: 61 ISEVLRRSKYIVFHIEKDNDRRILISHLGMAGGFFVVDDLKEIGTPNYRKHWQVIFELNN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 +++Y+D RRFG ++ + YP + PEP D YL Sbjct: 121 GK-----KLVYSDIRRFG--EIRNIANYESYPLFLEIAPEPFDKEAMIHYLSCFDINKYA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +L+ K++AG GNIY CEAL+R + P + SL K++L+ +QE+ Sbjct: 174 NKPIKQMILDHKVIAGAGNIYACEALYRTGIRPDKIANSLSHQQ---KEMLFYYVQEV-- 228 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 L + I GG+S+ DY H DG G Q +VY + CG I V A R++ + Sbjct: 229 -LEEGIKYGGTSISDYRHADGKTGEMQLHLNVYK---QKYCKTCGHEIETKVIATRNSHF 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPNCQK 290 >gi|295396032|ref|ZP_06806216.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] gi|294971120|gb|EFG47011.1| DNA-formamidopyrimidine glycosylase [Brevibacterium mcbrellneri ATCC 49030] Length = 329 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 90/337 (26%), Positives = 147/337 (43%), Gaps = 61/337 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---------FSAATRGKKII 51 MPELPEVE +R+ L + + + T+T + + F A G +I+ Sbjct: 1 MPELPEVESVRQGLSVWLTDATITRAQVLDARILGTTSARNVPIERVASFERALEGVRIV 60 Query: 52 DVSRRAKYLLIELE-----------------------GNLSIIVHLGMSGSFIIEHTSCA 88 V RR KY+ + L ++ +HLGMSG I Sbjct: 61 SVERRGKYMWMPLAVGGLVGGGLVSDGEARDGEAAEVDEWALAMHLGMSGQARIHEA--- 117 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPP---------- 138 ++P H H ++ + D R FG + + L P Sbjct: 118 ---EDPLHPHTRAVFDVAGPAGVGQIRFVDQRIFGHLGVERLVLGVAGTPGATGTAGERR 174 Query: 139 -----LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 R G +P + F+ + +KN +K+ALL+Q++V+G+GNIY EAL+ A Sbjct: 175 LVAESARGAGLDPFEVGFSVPMVARAIARKNVAIKSALLDQRVVSGVGNIYADEALFEAG 234 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNA 252 + P + L + + ++++ + V+ A++ GG+S YV+++G GYF+ + Sbjct: 235 VHPAARASRLRISR------IERVLEAARDVMARALEVGGTSFDALYVNVNGESGYFERS 288 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC+ C I R+V GRST C CQK Sbjct: 289 LQVYGREGQPCV-RCSTPITRVVLGGRSTHVCVKCQK 324 >gi|15828781|ref|NP_326141.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pulmonis UAB CTIP] gi|17366043|sp|Q98QQ1|FPG_MYCPU RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|14089724|emb|CAC13483.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycoplasma pulmonis] Length = 278 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV ++ ++L ++N+ + + L + P +F G+KI+ +S K Sbjct: 1 MPELPEVRVVCKSLNEKVQNLVFKKVEIFNPKLFKEYDPSYFQEFLIGEKILKISNLGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL M G + KP + +H N + + Y + Sbjct: 61 IIYFLTNNKIMLSHLRMEGKYSFYEQ---KPKETLKHIQAIFYFENGSE-----LHYRES 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + + PL + P + F ++ KK +K LL+Q IV+G Sbjct: 113 RPFGTFHIRYLNNYLKIDPLAKVAQSPGEIDF--ETFYNRLSKKALAIKPTLLDQSIVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P + L KD + ++++ ++L + + GGSS+ Y Sbjct: 171 IGNIYADEILFASKIHPATPSNLLS------KDKVKEILKNAIEILDKSTELGGSSINSY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ G +QN V+ K GE C+ C I +I GR T++C CQK Sbjct: 225 ESLNKKEGQYQNFLKVHTKKGEFCIK-CSSKIEKIKFKGRGTYFCPTCQK 273 >gi|255027263|ref|ZP_05299249.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-003] Length = 214 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 17/231 (7%) Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LL +L N +I+ HL M G F + + + +H H+ ++T + + D Sbjct: 1 FLLFDLT-NCTILSHLRMEGKFRLMD----ENEEVSKHTHIIFHFEDHTELR-----FLD 50 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG M++ + + ++ LGPEP +F K + +K ALL+QK+VA Sbjct: 51 VRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVA 110 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R Sbjct: 111 GVGNIYADEICFEAKVRPERAANSLSDKE------IKRIFKATKSIMTEAVALGGSTVRT 164 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+ G +G +QN VYGKT EPC+ CG I +I GR T +C CQK Sbjct: 165 YVNSQGKLGQYQNKLKVYGKTDEPCV-VCGTPIEKIKLNGRGTHFCPNCQK 214 >gi|311113799|ref|YP_003985021.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] gi|310945293|gb|ADP41587.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa ATCC 17931] Length = 332 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 89/335 (26%), Positives = 146/335 (43%), Gaps = 57/335 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDF--PHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + + + L +++R F+ +I RR Sbjct: 1 MPELPEVETVREGVHHHAVGCVIERVRILDERSIRRHIGGSADFTTCLERTRIRGAYRRG 60 Query: 58 KYLLIELEGN-----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 KY+ + L ++++HLGMSG +++ +H + Sbjct: 61 KYMWLTLSAPEDEPFPKRGDSDDTLLPYALVIHLGMSGQLLVKTPE----FPAEKHLKIV 116 Query: 101 ISLTNNTN---TKKYRVIYNDPRRFGFMDLV----------------ETSLKYQYP-PLR 140 + L K + + D R FG M L E S ++ P + Sbjct: 117 LELEPADGESTNKATELRFVDQRIFGGMFLSNLVPDIPAGTSSAGAEEISEEFLVPEAVE 176 Query: 141 TLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 +G +P D SF+ + + +S +K LL+Q +V+GIGNIY EALWRA++ + Sbjct: 177 HIGRDPVDPSFDVAKIRRIMLRTSSGIKRLLLDQSVVSGIGNIYADEALWRARIHYAKPA 236 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKT 259 +SL +L + +VL +A+ AGG+S YV+++G GYF + + YG+ Sbjct: 237 KSLSAAQT------RELFAAVHQVLTEALHAGGTSFDALYVNVNGQSGYFDRSLNAYGRA 290 Query: 260 GEPCLSNC-----GQMIRRIVQAGRSTFYCTYCQK 289 GEPC C +I R RS++ C +CQ+ Sbjct: 291 GEPC-RRCLEAGRTSIIVREPFMNRSSYRCPHCQR 324 >gi|126651390|ref|ZP_01723597.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] gi|126591919|gb|EAZ86002.1| hypothetical protein BB14905_12510 [Bacillus sp. B14905] Length = 290 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 33/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + ++ P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSERVHFSFSEGKQCIVKQAEPDAFELTLSEMT 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTN 105 I + RRAKY+ L E ++ HLGM+G++ + ++ K +H H T + + Sbjct: 61 ITKIERRAKYIFFHLFKDEVPYVLVSHLGMTGAWFVVNSPEDIDEAKFQKHIHATFKMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKK 163 +IY+D RRFG + + + PL + PEP D ++T + Sbjct: 121 GGY-----LIYSDIRRFGELRFLAK--IEDHVPLTKMAPEPFDELACDFFITKSTLPKYE 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +++ ++V+G GNIY EAL+ K+ P RK + + L +EI Sbjct: 174 NKAVKEVIMDGQVVSGCGNIYATEALFAQKIHPARKMNRISEKRK------RALFEEIVA 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR++ + Sbjct: 228 VLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKICP---ACETATSQMTIGGRTSVF 284 Query: 284 CTYCQ 288 C CQ Sbjct: 285 CPNCQ 289 >gi|315655501|ref|ZP_07908400.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315490156|gb|EFU79782.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 321 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 92/331 (27%), Positives = 136/331 (41%), Gaps = 54/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITELRTGLVGARLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-------------- 95 K+L L EG L++++HLGMSG +E K Sbjct: 61 GKFLWFSLSGEVPSSEGPLALVIHLGMSGQLRVESRGATLHRKEAATSPQVAPQYSRETR 120 Query: 96 ---HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA----- 147 H + +L N + +++ D R FG ++L P PEP Sbjct: 121 LLLHERLRFTLDNEKD-----LVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPLGV 175 Query: 148 --------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 D + + +K LL+Q IV+GIGNIY E L+ A++ P Sbjct: 176 EHIARDVLDPCRDTTDFVKKTRASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAP 235 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGK 258 RSL L +L+ + V+ A+ GG+S R YV+ G+ G F VYG+ Sbjct: 236 GRSLSDR------KLRELLGAVAAVMGQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGR 289 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ C CG + +++ GRS+ +C CQ+ Sbjct: 290 GGQSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|87120854|ref|ZP_01076746.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] gi|86163692|gb|EAQ64965.1| formamidopyrimidine-DNA glycosylase [Marinomonas sp. MED121] Length = 216 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 17/233 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R + ++N + D+ + + LR+ G+ +I +SRR KY+ Sbjct: 1 MPELPEVETTKRGIQPHLQNQQILDVEIRQAQLRWPITAELVEQVSGQDVISLSRRGKYI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I ++I+HLGMSGS + H+HV L++ + Y DPR Sbjct: 61 GIHTSTG-TVIIHLGMSGSLYLVAADTPPLF----HDHVDFKLSSGQWLR-----YTDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + L + ++ LGPEP ++FNA YL + K +K +++ K + G+ Sbjct: 111 RFGAI-LWTKEDWLNHSLIQHLGPEPLSDAFNAAYLAAKAKGKTQAIKTFIMDSKQLVGV 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 GNIY EAL+ A + P R+ + T KL+ AI+ GG Sbjct: 170 GNIYANEALFMAGIKPNRRAGLVSAKRLTVLVDCIKLVLAQ------AIEQGG 216 >gi|308189908|ref|YP_003922839.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] gi|307624650|gb|ADN68955.1| DNA-formamidopyrimidine glycosylase [Mycoplasma fermentans JER] Length = 273 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ N L ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSET--NIKELFNKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ + L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNIT------FEQLEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC CQK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNCQK 273 >gi|94987079|ref|YP_595012.1| formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] gi|94731328|emb|CAJ54691.1| Formamidopyrimidine-DNA glycosylase [Lawsonia intracellularis PHE/MN1-00] Length = 279 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 148/292 (50%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L ++ + ++ ++ G RR K L Sbjct: 1 MPELPEVETIVRTLEPIINGRMCLNYTVYNQDSVQGDISL--DVLIGAIFGKPFRRGKLL 58 Query: 61 LIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 LI L ++ +HL M+G ++ H V+ SL + + + Sbjct: 59 LIPLVIKDSHVYTLCIHLKMTGRILVYPQDRCPTT----HTRVSFSLDDGNT-----IFF 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R+FG++ ++ T+ + +P TLGPEP + + +F + N+K+ LLNQ++ Sbjct: 110 EDIRKFGYVRILSTTEEPVWPFWNTLGPEPLEIDVS--TFIERFRGRRGNIKSLLLNQRV 167 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG GNIY E+L+RA++SP+ L + + L +Q+VL++AI + GSS+ Sbjct: 168 IAGCGNIYADESLFRAQISPMATVSQLSM------ESIATLYHALQEVLLEAIASCGSSI 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +DY DG++G FQN+ +VYG+ G+PC+ C + + GR T +C+ CQ Sbjct: 222 KDYRAADGNVGAFQNSLNVYGRFGKPCV-VCKKDLEGTRIGGRMTVWCSSCQ 272 >gi|283457875|ref|YP_003362475.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133890|dbj|BAI64655.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 359 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 92/357 (25%), Positives = 153/357 (42%), Gaps = 75/357 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + V + + ++LR P HF A G+ + RR Sbjct: 5 MPELPEVETVRAGIADHSLGRPVRAVRVVDARSLRRHLPGPAHFETALTGRALRGAYRRG 64 Query: 58 KYLLIELE------GNLSIIVHLGMSGSFIIEHTSC------------------AKPIKN 93 KYL + L + +++VHLGMSG ++ A + Sbjct: 65 KYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGGDSGSESGSDSGNESEARAAFDEQ 124 Query: 94 PQHNHVTISL----------------TNNTNTKKYRVIYNDPRRFGFMDLVE-------- 129 P+H V + L + N R+++ D R FG M L Sbjct: 125 PRHLRVALELGPVGATSVAGATGGAASANRANTGQRLLFVDQRIFGGMFLSPLVPDVPAA 184 Query: 130 -----------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +P D F+ + +F + +S +K LL+Q +++ Sbjct: 185 VATNKVAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLDQSVIS 244 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY EALWRA+L + R+L +L++ + +VL +++ AGG+S Sbjct: 245 GVGNIYADEALWRARLHYAKPARTLSAAQT------RELLEAVTQVLRESLAAGGTSFDA 298 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV++ G GYF+ + + YG+ GEPC C ++ R RS++ C +CQ+ Sbjct: 299 LYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQNRSSYRCPHCQR 354 >gi|85057347|ref|YP_456263.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789452|gb|ABC65184.1| formamidopyrimidine-DNA glycosylase [Aster yellows witches'-broom phytoplasma AYWB] Length = 276 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 136/288 (47%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+II L + + + + + F I+D+ R+ K+L Sbjct: 1 MPELPEVQIIVDFLKTQLIGKKIVATKVFYEPTVKNT-KEFQK-IEQTTILDIQRKGKFL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L L +I HL M G I KP P+H + S+ K + Y D R Sbjct: 59 LFFLTQELVLIGHLRMEGKLFI------KPCDEPKHKYEHFSIILGD---KSSLRYYDFR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ ++ L L +P + N ++L + K S LK LLNQKI++G+ Sbjct: 110 KFGRFEVKNQNIFLTQTTLHQLALDPFEI--NPVFLYQKILKTKSALKKVLLNQKIISGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ KL P K L + +++ QKVL AI GG+++ + Sbjct: 168 GNIYVNEVLFLVKLHPETKACELSLKQ------VQEIVTISQKVLAKAIKLGGTTVSTFE 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G IGYFQN V+GK +PC+ NC I +I GR T+ C CQ Sbjct: 222 SQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPICQ 268 >gi|220905063|ref|YP_002480375.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869362|gb|ACL49697.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 313 Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 100/326 (30%), Positives = 149/326 (45%), Gaps = 52/326 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L ++ + D + R + RG +I DV RR K L Sbjct: 1 MPELPEVETVARTLRPHVQGRIIADAQVLRPTSQHPLSLPLQD-LRGCRIADVVRRGKLL 59 Query: 61 LIELE------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL----- 103 L+ L+ NL + VHL M+G + + A H + L Sbjct: 60 LLLLDPTEAEKTCVRGMQNLCLAVHLRMTGRLM----TYAAKTSPGTHTRCILDLKALPA 115 Query: 104 ---------------------TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 + + + R+ ++D R FG M + ++P R L Sbjct: 116 TAGGQAAAECGPAGGAGVPGAEDCLTSGERRLFFDDVRAFGTMLAGTPEMFARWPFWREL 175 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GPEP D K S +K LL+QK++AG+GNIY E+L+ A + P RK Sbjct: 176 GPEPLDI--TEAAFAASIAAKRSAIKAVLLDQKMLAGVGNIYADESLFAAGIDPRRKGSE 233 Query: 203 LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP 262 L + +L+Q ++ VL+ +I GSS+RDY DG++G FQN F+VYG+ G+ Sbjct: 234 LTRLQAD------RLLQCLRDVLLLSISQCGSSIRDYRDADGNVGAFQNTFAVYGRGGQK 287 Query: 263 CLSNCGQMIRRIVQAGRSTFYCTYCQ 288 C + CG ++ + AGRST +C CQ Sbjct: 288 CKT-CGSLLEKAKVAGRSTVFCPQCQ 312 >gi|308177248|ref|YP_003916654.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307744711|emb|CBT75683.1| formamidopyrimidine-DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 307 Score = 231 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 37/313 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L ++ TV + + D F G I V RR Sbjct: 1 MPELPEVEVVREGLDKWIRARTVQSVQVLDPRSVRRHIDGVDDFEQTLTGCTITSVVRRG 60 Query: 58 KYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+L ++LEG +++ HLGMSG ++E + +H V +SL+ + + + Sbjct: 61 KFLWMDLEGLETPTALVAHLGMSGQLLVEEPDAP----DEKHLKVRLSLSQKSVFPR-EL 115 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPL-------------RTLGPEPADNSFNAIYLTHQFH 161 + D R FG M L P + + D L Sbjct: 116 RFVDQRIFGGMFLSPLVATADALPAGAGSIRATIPEAAAHIARDVMDPHRAPEDLYVSLR 175 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 ++ + LK A+L+Q I++G+GNIY EALW+A LS +R T ++ + + +L + Sbjct: 176 RRTTQLKRAILDQGIISGVGNIYADEALWQAGLSGLRNTATIRRPE------VDRLNDAL 229 Query: 222 QKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC-----GQMIRRIV 275 V+ A+ AGG+S YV+++G+ GYF + + YG+ G+ C C +IRR Sbjct: 230 VDVMTRALAAGGTSFDSLYVNVNGASGYFARSLNAYGREGKACA-RCLENGRDSLIRRDP 288 Query: 276 QAGRSTFYCTYCQ 288 GRS++ C CQ Sbjct: 289 FMGRSSYSCPVCQ 301 >gi|302542232|ref|ZP_07294574.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302459850|gb|EFL22943.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 286 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 22/283 (7%) Query: 15 MMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRAKYLLIELEG-NLSI 70 + TV ++ + F+A G++ V RR KYL + E ++ Sbjct: 2 ERWISGRTVAEVQVLHPRAVRRHLGGAEDFAARLTGRRTGAVRRRGKYLWLPFEDTAEAV 61 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL--- 127 + HLGMSG +++ + +H + + ++ T+ + + D R FG + L Sbjct: 62 LAHLGMSGQLLVQPGHAP----DEKHLRIRVRFADDVGTE---LRFVDQRTFGGLSLHGS 114 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 V L+ + + +P D +F+ ++ + +K ALL+Q +++G+GNIY E Sbjct: 115 VPGDLEGLPDAIAHIARDPLDPAFDEAAFHLALRRRRTTVKRALLDQSLISGVGNIYADE 174 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSI 246 ALWRA+L R T +L + +L+ ++ V+ A+ GG+S YV+++G Sbjct: 175 ALWRARLHYDRPTATLTRPRS------AELLGHVRDVMSAALAVGGTSFDSLYVNVNGES 228 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GYF+ + YG+ EPC CG +RR RS+++C CQ+ Sbjct: 229 GYFERSLDAYGREDEPC-RRCGTAMRRRPWMNRSSYFCPRCQR 270 >gi|325128407|gb|EGC51290.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 215 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 7/209 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE R + ++ TV + L + LR+ G++++ RRAKYL Sbjct: 1 MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQVLSCGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +++HLGMSGS I S + + +H+HV I ++ T + Y DPR Sbjct: 61 LIRFQTG-VLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVFSDGTVMR-----YRDPR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + E ++ +P L LGPEP +F YL + + LK AL++ +V G+ Sbjct: 115 KFGAILWYE-GIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRALKLALMDNAVVVGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 GNIY E+L+RA +SP R L + Sbjct: 174 GNIYANESLFRAGISPHRPANRLKKKECA 202 >gi|13508119|ref|NP_110068.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|2494594|sp|P75402|FPG_MYCPN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|1674146|gb|AAB96105.1| formamidopyrimidine-DNA glycosylase [Mycoplasma pneumoniae M129] gi|301633660|gb|ADK87214.1| DNA-formamidopyrimidine glycosylase [Mycoplasma pneumoniae FH] Length = 277 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 16/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + +H K L+ + A +D+ RR KY Sbjct: 1 MPELPEVATVITELKSCVLNKPVKQVKVHLDKVLKNTNVKQLNDALVNHSFVDIKRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L L ++ HL M G + E + NHV + + + Y+D Sbjct: 61 IIFCLSNGLFLVSHLRMEGKYFFEAKGSQFDL-----NHVLVEFLFQDGDQ---LNYHDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG L L L +P D FN + ++ HK N +K +L+Q ++G Sbjct: 113 RQFGTFHLFNRYQFENARELNKLALDPLDQEFNHQAIFNKGHKSNKKIKTFILDQTNISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P ++L + + Q +L A++ G+++ + Sbjct: 173 IGNIYADEILFASKIHPETLAKNLNLSQ------YQLICQNATDILKKAVEMKGTTIGTF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +Q+ ++GK G+ C S C I + GR ++ C CQ Sbjct: 227 TFKKDHTGGYQHFLKIHGKKGKQCQS-CNTTIIKKKINGRGSYICEKCQ 274 >gi|26553653|ref|NP_757587.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] gi|26453659|dbj|BAC43991.1| formamidopyrimidine-DNA glycosylase [Mycoplasma penetrans HF-2] Length = 277 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 18/291 (6%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + +L N T+T+I + K + F+ ++I D++R+ K Sbjct: 1 MPELPEVQSVIDSLKEQGCLNRTITNIESIMPKIFKNCSYEDFTHYIINEQIKDITRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ L + +VHL M G E T + + +H V I + + Y + Y+D Sbjct: 61 YLIFHLTNDKVFVVHLRMEGKLFFEKTDSSY---DKKHVLVKIEMDD------YEIRYHD 111 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRFG + + ++ LG +P + F+ YL + K N +K LL+Q+ V+ Sbjct: 112 TRRFGTFTIYNENNYLDSKEIKKLGLDPLEEEFDWKYLKNNIKKSNRAIKTTLLDQENVS 171 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E L+ + + P L N+ K+ + + +L A++ G+++ Sbjct: 172 GIGNIYADEILFASSIHPETIANKLTDND------FKKIAENSRIILAKAVENKGTTIAT 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y G FQ V+ K C+ NC I +I GR T+ C CQK Sbjct: 226 YFFKKEQKGEFQKFLKVHTKKDFDCV-NCKNKIVKIKVNGRGTYLCLKCQK 275 >gi|149173447|ref|ZP_01852077.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] gi|148847629|gb|EDL61962.1| formamidopyrimidine-DNA glycosylase [Planctomyces maris DSM 8797] Length = 282 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + ++ + D C + + + V RR Sbjct: 1 MPELPEVETMVRGIREAVEGRKIKDFRNCPCPCKPISMKPGIKSIRTKALNQTVTSVRRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 AK ++++LE S ++ M+G ++ P H+ + T + + Sbjct: 61 AKRVILDLENGYSFVIEPRMTGLMLLSD--------PPDTGHLRLEWTLQKGRSSRSLWF 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L+ + + LGP+ + A L + K + +K ALL+QK+ Sbjct: 113 WDRRGLGTVQLLSRKEQELVLGPQKLGPDALEI--TANELKQRLAKTSRAIKVALLDQKM 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN+Y E L ++++ P R L + L + +Q++L AI GS+L Sbjct: 171 VAGIGNLYASEMLHQSRIHPERTADQLSTAE------IRSLHKAMQQILKTAIRYEGSTL 224 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D Y + G +QN VYG+ + C S G I RIVQA RSTF+C CQ Sbjct: 225 GDGTYRNALNQSGGYQNQHQVYGQEEKNCPSCKGAQIVRIVQAQRSTFFCPCCQ 278 >gi|329768945|ref|ZP_08260371.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] gi|328836167|gb|EGF85849.1| formamidopyrimidine-DNA glycosylase [Gemella sanguinis M325] Length = 286 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 138/302 (45%), Gaps = 31/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK----------NLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L +KN + + + FS GKKI Sbjct: 1 MPELPEVENIKLGLEDSLKNKKILSVTFSNTVKEGHDLNKMPIVKQSLIDFSNNVVGKKI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNT 109 ++SRR KYL + L II H GM+G+F + + KN +H HV L N Sbjct: 61 KELSRRGKYLYLALNKGY-IITHFGMTGAFFLVNDIAEITNKNYYKHRHVIFELDTNE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN--SNL 167 +++++D RRFG + VE + + P L PEP + +L KK ++ Sbjct: 118 ---KLVFSDIRRFGELRYVEKIGE--FKPFVNLAPEPFEKKAKQYFLDKLLEKKYKDQSI 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+ + G GNIY CE L+R ++ P+ K L L E+ +L Sbjct: 173 KALLLDGNVFCGCGNIYDCEVLYRKRIHPLTKPCELTLKEK------EDLFDELVFILEW 226 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI GGS++ DYVH DG G QN +YGK P G + I GRS+ YC C Sbjct: 227 AIKEGGSTISDYVHADGGEGNMQNFHQIYGKKKCP----LGHDVENINIKGRSSHYCPVC 282 Query: 288 QK 289 QK Sbjct: 283 QK 284 >gi|330813300|ref|YP_004357539.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] gi|327486395|gb|AEA80800.1| formamidopyrimidine-DNA glycosylase [Candidatus Pelagibacter sp. IMCC9063] Length = 286 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 20/296 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI ++ L +++ +TDI + +LR+ +F KKI ++RR+KYL Sbjct: 1 MPELPEVEITKKTLQKYVQDQYITDIKIKNYSLRYKINKNFRKNVVKKKIKKITRRSKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSC-------AKPIKNPQHNHVTISLTNNTNTKKYR 113 + L I+HLGM+G ++ + + +HNH+ KKY Sbjct: 61 IFHLSDKTFFIIHLGMTGRILVGKNNTLLDTSFYSSNSSINKHNHLYFFF------KKYV 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 +IYND RRFGF+ + L LG EP S N Y + ++KN L++ Sbjct: 115 MIYNDTRRFGFIKFYTEQELLRSSHLIHLGVEPLSKSLNFSYFKERIKGFKKSIKNTLMD 174 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + G+GNIYV EAL+ +K+SP R + + N I+K+L +I GG Sbjct: 175 QSFICGLGNIYVNEALFISKISPGRMSFKIKDNEIILLIK------SIKKILKKSIVFGG 228 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 S+++D+ + +G G FQN F VYGK G+ C +C +I+R V + R+TF+CT CQ Sbjct: 229 STIKDFHNSEGKSGQFQNFFKVYGKEGQGCPRSSCKGIIQRSVISSRATFFCTKCQ 284 >gi|315656592|ref|ZP_07909479.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492547|gb|EFU82151.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 321 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 97/329 (29%), Positives = 141/329 (42%), Gaps = 50/329 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V + H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLSVSDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIE--------HTSCAKPIKNPQH----- 96 K+L L +G L++++HLGMSG +E + A P PQH Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQGAPQHSRETR 120 Query: 97 --NHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA------- 147 H + T + + +++ D R FG ++L P PEP Sbjct: 121 LLPHERLRFTLDN---EKDLVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGVEH 177 Query: 148 ------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 D + + H +K LL+Q IV+GIGNIY E L+ A++ P R Sbjct: 178 IARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAPGR 237 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGKTG 260 SL L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ G Sbjct: 238 SLSDR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGRGG 291 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + C CG + +++ GRS+ +C CQ+ Sbjct: 292 QSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|293363949|ref|ZP_06610685.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] gi|292552439|gb|EFF41213.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alligatoris A21JP2] Length = 274 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ +L ++K +T + ++ K ++ +F + + I + KY Sbjct: 1 MPEYPEVTVVSNSLNELVKFKKITKVEVNLEKIIKNTDVKNFINSLENRVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +L +I HL M G F E+ + N +H+ V + +N+ ++IYND Sbjct: 61 IIFSFDNDLKMISHLRMEGKFFYENFLSDR---NKKHDLVIFTFEDNS-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLG--PEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 RRFG MDLV+ + + L P P +A + + K +K LL+Q IV Sbjct: 113 RRFGTMDLVQ-GDLSTFTKISKLANLPNPL----DASKIMQKVKNKKIPIKTVLLDQSIV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGNIY E L+ +K++P+ +++ ++Q + ++ + GGSS+ Sbjct: 168 LGIGNIYADEVLFASKINPLSPASNILLKE------WKLILQNAKDIMNQSTKQGGSSVN 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y ++ G FQN VY + CL C + +I GR T +C CQK Sbjct: 222 TYGSVNNVQGTFQNELKVYNRATLACL-RCKNKLDKIKVNGRGTTFCAICQK 272 >gi|149180839|ref|ZP_01859341.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] gi|148851358|gb|EDL65506.1| hypothetical protein BSG1_00370 [Bacillus sp. SG-1] Length = 270 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + L + N ++++ + R+ F+ + + I V+RRAK+L Sbjct: 1 MPELPEMENYKNLLSERILNKQISEVEIGREKSINVPVDEFTHLVKNRTIKKVTRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ ++ +++HL M G ++ + KP + + I L+ +Y Sbjct: 61 LFHLDNDVVLLLHL-MLGGWMFYGSEQEKPDRT-----IQIRLSFGIQH-----LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L L L LGPEP F+ K+ +LK L+NQ+ +AGI Sbjct: 110 RLGYLHLY-KDLDEAAKELDDLGPEPITPPFSVEQFLDLAGKRRGSLKTTLVNQRFLAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P RK L Q+ +L Q +Q +L DAI +GG Sbjct: 169 GNCYSDEICFHAAIMPGRKFNELSQHET------RQLFQSMQFILNDAIASGGYMEEPLF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + + VY + GEPC+ CG I + + + TFYC CQK Sbjct: 223 PGDNLTGGYNSKCRVYDREGEPCI-RCGSQIIKDKISSKKTFYCGNCQK 270 >gi|119964032|ref|YP_948195.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119950891|gb|ABM09802.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 320 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 151/324 (46%), Gaps = 48/324 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L ++ TVT + + +R F ++DV RR Sbjct: 1 MPELPEVEVVRRGLARWVRGRTVTGVDVLDPRSIRRHALGTEDFIGNLEHATVLDVVRRG 60 Query: 58 KYLLIEL------EGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 K+L + L + + ++ HLGMSG +++ + + +H V ISL+ Sbjct: 61 KFLWMPLVMSGVSDTEPADELPKVALMAHLGMSGQLLMQDPV----VPDEKHLKVRISLS 116 Query: 105 NNTNTKKYRVIYNDPRRFG--------------FMDLVETSLKYQYPPLRTLGPEPADNS 150 + ++ + D R FG L ET L + +P D Sbjct: 117 PADGMPE-QLRFVDQRIFGGLFVTALVPTVDGGPGGLGETPLPEIAEEASHIARDPLDPY 175 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 F+ + + + LK ALL+Q +++GIGNIY EALWRA+L R T +L + + Sbjct: 176 FSFDAFYRKVKGRKTGLKRALLDQGVISGIGNIYADEALWRARLHYARATDTLRRADA-- 233 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 +L++ ++ V+ A+ AGG+S YV+++G GYF + + YG+ GE C C Sbjct: 234 ----ERLVEAVKDVMNAALAAGGTSFDSLYVNVNGDSGYFARSLNAYGRAGELCG-RCEA 288 Query: 270 M-----IRRIVQAGRSTFYCTYCQ 288 + ++R RS++ C CQ Sbjct: 289 IGLHSVMKREQFMNRSSYTCPVCQ 312 >gi|257068989|ref|YP_003155244.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] gi|256559807|gb|ACU85654.1| formamidopyrimidine-DNA glycosylase Fpg [Brachybacterium faecium DSM 4810] Length = 313 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 94/322 (29%), Positives = 146/322 (45%), Gaps = 45/322 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L T+TD+ L + AA G + V+RR Sbjct: 1 MPELPEVEVVRRGLAPRTLGRTITDVELLDARIIRRQAGGADRLRAALEGSALTAVARRG 60 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNP-QHNHVTI 101 K+L L + +++ HLGMSG P +P +H +++ Sbjct: 61 KFLWWRLADPDGADTGEALMGHLGMSGQLRFATPGAPAAAPSAASEGPASDPLRHRRLSL 120 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMD---LVETSL----------KYQYPPLRTLGPEPAD 148 L + R+ D R FG + LVE + + + D Sbjct: 121 HLDDGA-----RLDLVDQRLFGGLWTSPLVEAADGSLAAVGSPDALLPEGAAHIARDLLD 175 Query: 149 NSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 + + + + S +K LLNQ+IV+GIGNIY EALW A+ +L Q Sbjct: 176 PAADLPAIARALRTRRSAVKTLLLNQEIVSGIGNIYADEALWAARTRYDTPGTALSQRRA 235 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 +++ + V+ A++ GG+S YV++DG GYF + + YG+ GEPC + C Sbjct: 236 LG------ILRAARAVMERALEVGGTSFDALYVNVDGRSGYFARSLAAYGREGEPC-TRC 288 Query: 268 GQMIRRIVQAGRSTFYCTYCQK 289 G+++RR+V GRS+ YC CQ+ Sbjct: 289 GRLLRRVVHQGRSSHYCPRCQR 310 >gi|269794453|ref|YP_003313908.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269096638|gb|ACZ21074.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 309 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 90/311 (28%), Positives = 142/311 (45%), Gaps = 33/311 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK---NLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V + + R P F+A G ++++ +RR Sbjct: 1 MPELPEVETVRDGLARHVLGARVDCVEVRRDYSVRRHEGGPVDFAARLSGHRLVEAARRG 60 Query: 58 KYLLIELE-GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KYL + L+ L+++ HLGMSG ++ + H V + LT T + + Sbjct: 61 KYLWLTLDEPGLALLGHLGMSGQLLVRSGDTLTAESS--HLRVRLHLTAADGTP-LALDF 117 Query: 117 NDPRRFGFMDLVE-------------TSLKYQYPPLRTLGPEPADNSFNA-----IYLTH 158 D R FG + + E T P+ + + D + L Sbjct: 118 VDQRTFGHLSVTELVATPDGLPGGLGTDEPLVPEPVSHIARDLLDPAVAEGTAGRTALVD 177 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 + ++ + +K ALL+Q +V+GIGNIY EALWRA R T + + Sbjct: 178 RVRRRRTGIKRALLDQTVVSGIGNIYADEALWRASTHYARGTAGMSRAQVAAVLA----- 232 Query: 219 QEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 ++V+ +A+ GG+S YV+++G+ GYF + + YG+ G+PC CG IRR Sbjct: 233 -AAEQVMREALSQGGTSFDALYVNVNGASGYFDRSLAAYGQAGKPC-RRCGATIRRDEFM 290 Query: 278 GRSTFYCTYCQ 288 RS+F C CQ Sbjct: 291 NRSSFSCPVCQ 301 >gi|121607944|ref|YP_995751.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] gi|121552584|gb|ABM56733.1| formamidopyrimidine-DNA glycosylase [Verminephrobacter eiseniae EF01-2] Length = 273 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 140/292 (47%), Gaps = 23/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ + + + L + LR+ + G++++ + RR KYL Sbjct: 1 MPELPEVEVTRRSFADAIAGARIQAVALGKP-LRWPLGCD-PMSLVGQQVLGLRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G L ++ LGMSGS H + H+H + T + +DPR Sbjct: 59 LADTSGGLLLLH-LGMSGSLRFSHGLPPAGV----HDHFDLVTDRGT------LRLHDPR 107 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP +SF+ K +K LL ++V G Sbjct: 108 RFGAVVYAPDEQAPVALKLLGALGMEPLSDSFSLATFQSGLKKSRMPIKPLLLAGRLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ A + P + + + +L + I+ VL A+ GGS+LR++ Sbjct: 168 VGNIYASEVLFLAGIRPTAVASRVG------AERVRRLHEAIRTVLTRAVQMGGSTLRNF 221 Query: 240 VHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ+ VYG+ G PC +CG IR + Q RS+++C CQ+ Sbjct: 222 SNADGMAGHFQSSAHIHVYGRDGAPC-HHCGSAIRLLRQGQRSSYFCPLCQR 272 >gi|169829548|ref|YP_001699706.1| formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] gi|168994036|gb|ACA41576.1| Formamidopyrimidine-DNA glycosylase [Lysinibacillus sphaericus C3-41] Length = 290 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 33/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE + + L ++ T+ + L + ++ P F Sbjct: 1 MPELPEVEGVVQALKPKVEGRTIQHVQLSERVHFSFSEGKQCIVKQAEPDAFELTLSEMT 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTN 105 I + RRAKY+ L E ++ HLGM+G++ + ++ K +H H T + + Sbjct: 61 ITKIERRAKYIFFHLLKDEVPYVLVSHLGMTGAWFVVNSPEDINEAKFQKHIHATFKMAD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKK 163 +IY+D RRFG + + + PL + PEP D ++T Sbjct: 121 GGY-----LIYSDIRRFGELRFLAK--IEDHIPLTKMAPEPFDELACEFFITKSTLPKYA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 N +K +++ ++++G GNIY EAL+ K+ P RK + + L +EI Sbjct: 174 NKAVKEVIMDGQVISGCGNIYATEALFAQKIHPARKMNRISEKRK------RALFEEIVA 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL +I+AGGS++ DY +I+G G QN +YGK P C ++ GR++ + Sbjct: 228 VLRQSIEAGGSTISDYRNINGEAGSMQNRLKMYGKKICP---ACETATSQMTIGGRTSSF 284 Query: 284 CTYCQ 288 C CQ Sbjct: 285 CPNCQ 289 >gi|116671046|ref|YP_831979.1| formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116611155|gb|ABK03879.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 326 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 54/330 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFD--FPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L+ ++ T+T + + +R F+ G +++DV RR Sbjct: 1 MPELPEVEVVRRGLVSWVRGRTITSVDVLDPRSIRRHALGAQDFTGNLEGSRVLDVVRRG 60 Query: 58 KYLLIELE-------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 K+L + LE ++++ HLGMSG +++ + + + +H Sbjct: 61 KFLWLPLEEAAAVQPGTDGIPAAGTSRPRVALMAHLGMSGQLLMQDSV----VPDEKHLK 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFG---FMDLVETSL-------KYQYPPLR----TLGP 144 V + L+ + ++ + D R FG LV T+ + P + + Sbjct: 117 VRLRLSPAHGMPE-QLRFVDQRIFGGLFVTSLVPTADGGPGGLGEVPEPFIAEEASHIAR 175 Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 +P D F+ + + + LK ALL+Q +V+GIGNIY EALWRA+L R T +L Sbjct: 176 DPLDPYFSFDSFYRRLRSRKTGLKRALLDQGLVSGIGNIYADEALWRARLHYARPTETLR 235 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPC 263 + + +++ ++V++DA+ AGG+S YV+++G+ GYF + + YG+ + C Sbjct: 236 RADAL------RVLDAAREVMLDALAAGGTSFDSLYVNVNGASGYFDRSLNAYGRENQEC 289 Query: 264 LSNCGQM-----IRRIVQAGRSTFYCTYCQ 288 C ++R RS++ C CQ Sbjct: 290 -KRCAAAGIVSLMKREQFMNRSSYTCPVCQ 318 >gi|89896847|ref|YP_520334.1| hypothetical protein DSY4101 [Desulfitobacterium hafniense Y51] gi|89336295|dbj|BAE85890.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 272 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+E + L + + + R F + I V R KYL Sbjct: 1 MPEIPEMETYKNYLQRSVLGKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ H+ + G E +P++ P +H+ + +++ + + D R Sbjct: 61 ILALSSGKALCAHMMLDGRMYYE--VAGEPVELPGRSHIRLKFADHSI-----LHFCDLR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G++ L+E S LG +P D F+ K +K L++QK ++GI Sbjct: 114 -LGYLKLLEPSQVDAIK--EGLGLDPLDAEFSLAAFLKILSGKRGMIKPLLMDQKNISGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A + P RKT +L +L I +L I GG + Sbjct: 171 GNAYANEILFAAGILPERKTPTLTDGEK------ERLYGVIPDLLQQGIAKGGYIEEPFA 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY +TG+PCL CG+ I++ + GR+ +YC CQ Sbjct: 225 PWDKLSGGMIPHFKVYDRTGQPCL-QCGEPIQQKIVGGRNAYYCLTCQ 271 >gi|294993978|ref|ZP_06799669.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] Length = 328 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 141/293 (48%), Gaps = 32/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++RR L + T+T++ +H P +A RG +I RR Sbjct: 16 MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRG 75 Query: 58 KYLLIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 KYL + L + +++VHLGMSG ++ CA HV IS + T Sbjct: 76 KYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAA--------HVRISALLDDGTV 127 Query: 111 KYRVIYNDPRRFGFM---DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + + D R FG DLV P+ L +P D F+ + +K+S L Sbjct: 128 ---LSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSEL 184 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q++V+GIGNIY EALWRAK++ +L L ++ V+ + Sbjct: 185 KRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRR------LGAVLHAAADVMRE 238 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 A+ GG+S YV+++G GYF+ + YG+ GE C CG +IRR R Sbjct: 239 ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENC-RRCGAVIRRERFMNR 290 >gi|148377581|ref|YP_001256457.1| foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] gi|148291627|emb|CAL59013.1| Foramidopyrimidine DNA glycosylase [Mycoplasma agalactiae PG2] Length = 279 Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + + L + N+T+T++ + K ++ F +KI+DV K Sbjct: 1 MPELPEVKTVVKALKGNILNLTITNVIVKLDKLIKNATASEFKNYLLNEKILDVYNVGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ +L N +++ HL M+G + + + + +H+++ L + + YND Sbjct: 61 IIYKLSNNKNLVSHLRMTGKYF----TDSSINRTRKHDYIIFELD-----SQMFLFYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + + + PL LG E + + L K+ +K+ LL+Q + G Sbjct: 112 RQFGTFHIKNDNELFSSKPLDKLGKEV--DKIDPKNLYESVRNKSIPIKSFLLDQSYILG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P KT + P + +++ + +L A + GGS++ D+ Sbjct: 170 IGNIYANEILFLSKINPWTKTNKI------PYEKFKEILSNTKIILDKATELGGSTIVDF 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G+ G FQN V+ + PC C +I++ A R T+YC CQK Sbjct: 224 SGLNGAEGQFQNHLQVHMRANMPCNK-CNALIQQEFIAQRMTYYCPICQK 272 >gi|317484387|ref|ZP_07943305.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] gi|316924362|gb|EFV45530.1| formamidopyrimidine-DNA glycosylase [Bilophila wadsworthia 3_1_6] Length = 305 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 93/315 (29%), Positives = 139/315 (44%), Gaps = 49/315 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I R L ++ + L + F+ G I RR K L Sbjct: 11 MPELPEVETIARTLAPQVEGRRIVACELLNPS-TFEGTIPLGK-VVGGVIGRPGRRGKLL 68 Query: 61 LIELEGN---------------------------LSIIVHLGMSGSFIIEHTSCAKPIKN 93 L+ L + HL M+G + Sbjct: 69 LLPLAFGSDPLPPVDEACPSGSLARCLACGDERITGLGFHLKMTGRLFVYPAGTP----P 124 Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 +H + L + + R+ ++D R+FG++ ++ S +P +LGPEP + +A Sbjct: 125 EKHTRLLFDLDDGS-----RLFFDDTRKFGYVRVLSPSSVSCWPFWNSLGPEPLE--MDA 177 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 F + +K LL+Q ++AG GNIY E+L+RA + P D Sbjct: 178 DAFAACFAGRRGKIKALLLDQSVLAGCGNIYADESLFRAGIRP--------DAQLVSADR 229 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L +L +++VL+++IDA GSS+RDY G G FQNAF VYG++GE CL CG + Sbjct: 230 LKRLHAALREVLLESIDACGSSIRDYRTARGDAGAFQNAFRVYGRSGETCLE-CGTPLES 288 Query: 274 IVQAGRSTFYCTYCQ 288 AGR+T +C CQ Sbjct: 289 CRIAGRATVFCPNCQ 303 >gi|255326577|ref|ZP_05367654.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296317|gb|EET75657.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 360 Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats. Identities = 93/362 (25%), Positives = 155/362 (42%), Gaps = 80/362 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R + V + + ++LR P HF A G+ + RR Sbjct: 1 MPELPEVETVRAGIADHSLGRLVQAVRVVDARSLRRHLPGPAHFEVALTGRALRGAYRRG 60 Query: 58 KYLLIELE------GNLSIIVHLGMSGSFIIEHTSCAKPI------------------KN 93 KYL + L + +++VHLGMSG ++ +P + Sbjct: 61 KYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGDEPGGDSGSDSGSESEARAAFDEQ 120 Query: 94 PQHNHVTISL----------------TNNTNTKKYRVIYNDPRRFGFM---DLVETSLKY 134 P+H V + L + N R+++ D R FG M LV Sbjct: 121 PRHLRVALELGPVGATSAAGATGGTVSTNRAGTGQRLLFVDQRIFGGMFLSRLVPDVPAA 180 Query: 135 Q---------------------YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 ++ + +P D F+ + +F + +S +K LL+ Sbjct: 181 VAVNEAAAGEAAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLD 240 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +++G+GNIY EALWRA+L + R+L +L++ + +VL +++ AGG Sbjct: 241 QSVISGVGNIYADEALWRARLHYAKPARTLSAAQT------RELLEAVTQVLRESLAAGG 294 Query: 234 SSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYC 287 +S YV++ G GYF+ + + YG+ GEPC C ++ R RS++ C +C Sbjct: 295 TSFDALYVNVLGESGYFERSLNAYGRAGEPC-HRCAEAGRTTLMVREPFQNRSSYRCPHC 353 Query: 288 QK 289 Q+ Sbjct: 354 QR 355 >gi|269929067|ref|YP_003321388.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] gi|269788424|gb|ACZ40566.1| formamidopyrimidine-DNA glycosylase [Sphaerobacter thermophilus DSM 20745] Length = 286 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 29/300 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + L R L P A G ++ V R KYL Sbjct: 1 MPELPEVEAARRGIAEQLLGRVLVGYELTRPALVVPAPGLTLDALVGSRLECVERHGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHN--------HVTISLTNNTNT 109 + E +++HL ++G + A P ++ H+ + + Sbjct: 61 FLSFE-PAVLVIHLKLAGQLVARGSGIPGFAAGHPVPAYDAPLPHKSTHLRFDFDGDAH- 118 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLK 168 + D R F + L+ + LGP+ D +F L ++ LK Sbjct: 119 ----LYLTDIRHFARVWLLPHDDLPAFREGLHLGPDVLDPAFTVETLRQGLARRTVGRLK 174 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +VAG+GNIYV E+LW+AKL P R SL + +L + I + A Sbjct: 175 PTLLDQSLVAGLGNIYVDESLWQAKLHPERTAASLTDAE------IERLYEGIHTTMELA 228 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GG+ + + +G F V+G+ G PC CG I +I R T+ C CQ Sbjct: 229 LPTGGARILN-SKAQTEVGEFP---FVHGREGLPC-PRCGTAIIKIRVNNRGTYLCPQCQ 283 >gi|327439257|dbj|BAK15622.1| formamidopyrimidine-DNA glycosylase [Solibacillus silvestris StLB046] Length = 290 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----------RKNLRFDFPHHFSAATRGKK 49 MPELPEVE + R+L +++ T+ + L + ++ P F R K Sbjct: 1 MPELPEVEGVVRDLRPIVEGKTIKSVSLSDVVYTSHEAGKQAIVKNAKPSQFELLVRDMK 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSG-SFIIEHTSCAKPIKNPQHNHVTISLTN 105 I + RR+KY+ L + ++ HLGMSG F++ K +H H +L + Sbjct: 61 IDKLERRSKYIFFHLKKDDERFILVNHLGMSGAWFVVTDVLEITEEKFRKHIHAIFTLAS 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL--THQFHKK 163 ++Y D RRFG + + +PPL + PEP D ++ + + Sbjct: 121 GE-----LLVYADIRRFGELRFI--KEIADHPPLLKMAPEPFDEIACDFFIMQSEKPKFA 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++K +++ ++++G GNIY EAL++ + P + T L + T L + I Sbjct: 174 KKSIKEVIMDGQVISGCGNIYATEALFKMLIHPGKATNELSREQKTM------LFRVICD 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL ++ID+GGS++ DY I+G G Q+ +YGK + C+ C +V AGR++ Y Sbjct: 228 VLQESIDSGGSTISDYRSINGGAGTMQHRLKMYGK--KQCV-VCETNTESLVIAGRTSTY 284 Query: 284 CTYCQK 289 C CQK Sbjct: 285 CPQCQK 290 >gi|300214317|gb|ADJ78733.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus salivarius CECT 5713] Length = 207 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 16/219 (7%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +I HL M G + +E ++ + +H HV T+ T+ + YND R+FG M LV+ Sbjct: 1 MISHLRMEGKYFVEPST----KEVEKHTHVVFDFTDGTSLR-----YNDVRKFGRMQLVK 51 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 T ++ Q L LGPEP + +F + ++ +KNALL+Q IVAG+GNIY E L Sbjct: 52 TGVEMQTAGLAKLGPEPKEETFIVEDFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVL 111 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 W +K+ P L + + L I K L A +AGG+++R Y G F Sbjct: 112 WMSKIHPETPANKLTEEE------VKVLRDNIIKELALATEAGGTTIRSYTDAFRHSGGF 165 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q + Y +TG+PC CG I+RIV R T +C CQ Sbjct: 166 QFSLHAYQRTGDPC-ERCGTPIQRIVVGQRGTHFCPKCQ 203 >gi|41326247|emb|CAF20409.1| FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE [Corynebacterium glutamicum ATCC 13032] Length = 277 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 130/292 (44%), Gaps = 31/292 (10%) Query: 11 RRNLMMVMKNMTVTDICLHRKNLRFD---FPHHFSAATRGKKIIDVSRRAKYLLIEL--- 64 RR L M T+ + + A G ++ RR K+L +EL Sbjct: 2 RRGLEDHMVGHTIVSATVLHPRAARNQLGGGPEIEANIAGLRVSAAKRRGKFLWLELIDA 61 Query: 65 -----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 +L ++VHLGMSG +I+ H + L N V + D Sbjct: 62 PSGETRPDLGLLVHLGMSGQMLIKEPDAPI----SPHLRAKVELDNGDE-----VWFVDQ 112 Query: 120 RRFGFMDLVETSLKYQYPP-LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R FG+ L L P + + + D S + + + S +K LLNQ+IV+ Sbjct: 113 RTFGYWWL--GDLVDGVPERVSHIATDVLDESADFSAIARNLKSRKSEIKRLLLNQEIVS 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW+AK+ P+++ L L +L+Q + V+ A+ GG+S Sbjct: 171 GIGNIYADEMLWQAKIHPLQRADRLSLAR------LEELLQAGKDVMTKALAQGGTSFDA 224 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + + Y +TGEPC CG +I R R + YC CQK Sbjct: 225 LYVNVNGNSGYFALSLNAYAQTGEPCG-RCGTLIIRESFMNRGSHYCPNCQK 275 >gi|219667324|ref|YP_002457759.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] gi|219537584|gb|ACL19323.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] Length = 272 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 17/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+E + L + + + + + R F + I V R KYL Sbjct: 1 MPEIPEMETYKNYLQLSVLDKRIVGTEITRARSTNVPTDEFVRWVQDTSIEQVLRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L ++ H+ + G E +P++ P +H+ + +++ + + D R Sbjct: 61 ILALSSGKALCAHMMLDGRMYYE--VAGEPVELPGRSHIRLKFADHSI-----LHFCDLR 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G++ L+ S LG +P D F+ + K +K L++QK ++GI Sbjct: 114 -LGYLKLLAPSQVDAIK--EGLGLDPLDAEFSLAAFLNILSGKRGMIKPLLMDQKNISGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A + P RKT +L +L I +L AI GG + Sbjct: 171 GNAYSNEILFAAGILPERKTPTLTDGERD------RLYGVIPDLLQQAIAKGGYIEEPFA 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY +TG+PCL CG+ I++ GR+ +YC CQ Sbjct: 225 SWDKLSGGMIPYFKVYDRTGQPCL-QCGEPIKQKTVGGRNAYYCLTCQ 271 >gi|108805235|ref|YP_645172.1| formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] gi|108766478|gb|ABG05360.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE +I ++ + V + R ++ P FS RG+ + RR K + Sbjct: 1 MPELPETTVISEDIRRLAAGRRVLRAEVFRPDVTNVPPEEFSGRLRGRVLEGTGRRGKLI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G + +VHL +SG + + + N + ++ Sbjct: 61 VLDF-GGVVGLVHLVISGRVL----RLPAWTEPDRLNTAVLEFEGGPVLSFAKLW----- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G+ L E ++P L LGP+P F YL ++ + +K LL+Q +VAG+ Sbjct: 111 -LGYFHLYEPERVGEHPLLARLGPDPFSEGFTPGYLARA-FRRRAAVKGLLLDQSVVAGL 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ A++ P+R+ +L + + + +K+L AI+ G++ Y Sbjct: 169 GNIYVDEVLFAARVHPLRRADTLSEEE------IRAIHAATRKILRRAIELRGTTFDSYH 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G +Q V+ + G+PC +CG I ++ AGR T C CQ Sbjct: 223 DAFGESGGYQRELRVFARAGKPC-PSCGARIAKLRVAGRGTHVCPACQ 269 >gi|222151603|ref|YP_002560759.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] gi|222120728|dbj|BAH18063.1| formamidopyrimidine-DNA glycosylase homolog [Macrococcus caseolyticus JCSC5402] Length = 290 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 33/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + + DI ++ F Sbjct: 1 MPELPEVEHVKRGIEPQITGERIIDIHFSDAVSNGKTQGKETIVKGLSLDAFKERCIDTH 60 Query: 50 IIDVSRRAKYLLIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKN-PQHNHVTISLTN 105 I V RR+KY++ +L +GN ++ HLGM+G++ + + + N +H HVT +L+ Sbjct: 61 IESVMRRSKYIIFKLKGKDGNRYMVGHLGMTGAYFVVPSIDDITVPNYKKHWHVTFTLS- 119 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY--LTHQFHKK 163 +++Y+D RRFG + +++ S + T+ PEP A Y H + Sbjct: 120 ----SSMKLVYSDIRRFGELRMLDESQFAHFD--ATIAPEPFSEEGRAHYISALHLPKYQ 173 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K ++ +V+G GNIY CEAL A ++P + L + T L + I Sbjct: 174 DKPIKQVIMLHSVVSGCGNIYACEALHNAGINPNITVKKLSEKRRT------LLYEHIVD 227 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 VL + I GGS++ DY + G G QN F VYGK C + CG I+ V A R+T Y Sbjct: 228 VLNEGILYGGSTISDYRNAQGESGTMQNRFKVYGKKI--CGT-CGNEIKTKVIATRNTHY 284 Query: 284 CTYCQK 289 CT+CQK Sbjct: 285 CTHCQK 290 >gi|309807139|ref|ZP_07701116.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] gi|308166490|gb|EFO68692.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus iners LactinV 03V1-b] Length = 197 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 108/206 (52%), Gaps = 9/206 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE +RR L ++K ++++ + + + F G+KI+ + R KYL Sbjct: 1 MPEMPEVETVRRTLEPLIKGKIISNVTIWYDKIIVNDADFFQRKVVGQKILAIDRYGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI L NL+I+ HL M G + + K +H HV + ++NT + Y+D R Sbjct: 61 LIRLTNNLTIVSHLRMEGKYHFLDSDAPKQ----KHEHVQFTFSDNTYLR-----YDDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M L+ET + + ++ LG EP F + ++ + +KN LL+Q IV G+ Sbjct: 112 KFGRMQLIETGTERRNTGIKNLGFEPNSEDFTLDFFLNRVKARKRAIKNVLLDQSIVCGL 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN 206 GNIY E LW++K+ P+ + Sbjct: 172 GNIYTDEVLWQSKIHPLSIANKIATR 197 >gi|226227840|ref|YP_002761946.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226091031|dbj|BAH39476.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 279 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 22/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPE E I R+L ++ V D+ + R + LR +A G +I V RRAK Sbjct: 1 MPELPETETIARDLHAMVVGSVVRDVSVPRPDVLREIAAADLCSALSGGRITRVWRRAKL 60 Query: 60 LLIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++++L N ++V +G +++ + P ++ V +SL + + Sbjct: 61 IVLDLTLADRQNSHLVVQPRFTGGLLVDDGTL--PTSEFAYSCVAMSLGDGRT-----LH 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D RR G + L+ + +Y LGPEP D +F+A + + ++K L++Q+ Sbjct: 114 YRDVRRLGTVALMPEARFLEYS--SGLGPEPLDQTFDATAFSGCVRLSHQSIKVVLMDQR 171 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AG+GNIY EALWRA + P R+ SL +L ++ VL +I A G+S Sbjct: 172 RLAGVGNIYANEALWRAGIDPSREASSLTFAEA------ERLHTALRDVLTASIAARGTS 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-QMIRRIVQAGRSTFYCTYCQ 288 RDY G G F + YG+ GEPC CG +++ GRST +C CQ Sbjct: 226 FRDYRDARGERGTFVEQLAAYGRGGEPC-PRCGRRLVVTHAVDGRSTVFCPGCQ 278 >gi|229543047|ref|ZP_04432107.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] gi|229327467|gb|EEN93142.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] Length = 267 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + L ++ T+T+ + R+ F A +KI +SR AKYL Sbjct: 1 MPELPEMETYKTWLASLIGGRTITNAMIQREKSINIPAGKFMKAVTNQKIQSISRCAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +LE +++HL M G ++ KP + + I L+ R ++ Sbjct: 61 IFQLENGSCLLLHL-MLGGWMFFGKEEDKPDRT-----IQIQLSFGD-----RHLFFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ +GPE D F L + ++ LK L NQ+++AGI Sbjct: 110 RLGYLHLLTPEAVQAE--FEKIGPELLDLHFTLAVLQQRMQQRRGILKTVLTNQEVLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A+L P +K L L +L + I+ +L I+ GG Sbjct: 168 GNRYSDEILWHAQLRPDQKAGHLDNQQ------LARLYESIRFILQKGIEQGGYMEHPLH 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG G +Q V+G+ EPC C IR+ + T++C YCQ Sbjct: 222 KGDGKTGCYQ--MYVHGREDEPC-PRCSTPIRKKEISSHKTYFCPYCQ 266 >gi|304373419|ref|YP_003856628.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] gi|304309610|gb|ADM22090.1| Formamidopyrimidine-DNA glycosylase, MutM [Mycoplasma hyorhinis HUB-1] Length = 278 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L+++ L + +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTIEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL M+G + ++S K HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRMNGKYFFNNSS-----KKELHNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + S L ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPMEIS--EEELFNKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ + P+ K + +N L + + +L+ +I+ GGS++ Y Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE------LKLIKKFATSILLKSIELGGSTINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 223 SSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|256789490|ref|ZP_05527921.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289773384|ref|ZP_06532762.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289703583|gb|EFD71012.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 287 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G ++ V R K+L Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPPLTA-LEGHRVAAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E G ++ HL +G + + KP K P V + + + Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALE-----TGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + Q P + LGP+P F+ + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVV--ADPRQVPGVARLGPDPLAADFDEARFAALLDGERRQLKGALRDQSLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP + SL + +L ++ L +A++ Sbjct: 173 AGVGNAYSDEILHAAKMSPFKLAASLTDDET------ARLYAALRDTLTEAVERSRGIAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 227 GRLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|21219464|ref|NP_625243.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|6580659|emb|CAB63194.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 287 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G ++ V R K+L Sbjct: 1 MPELPEVEALRDFLTEHLTGREIVRVLPVAISVLKTYDPPLTA-LEGHRVAAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E G ++ HL +G + + KP K P V + + + Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPSGLPKPGKGPLALRVALE-----TGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + Q P + LGP+P F+ + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVV--ADPRQVPGVARLGPDPLAADFDEARFAALLDGERRQLKGALRDQSLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP + SL +L ++ L +A++ Sbjct: 173 AGVGNAYSDEVLHAAKMSPFKLAASLTDEET------ARLYAALRDTLTEAVERSRGIAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 227 GRLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|241764080|ref|ZP_04762118.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] gi|241366611|gb|EER61092.1| formamidopyrimidine-DNA glycosylase [Acidovorax delafieldii 2AN] Length = 271 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 143/290 (49%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+L V+ + + L + LR+ + G+ ++ + RR KYL Sbjct: 1 MPELPEVEVTRRSLAEVITGARIEAVRLGKP-LRWPLGCA-PSILVGQHMVALRRRGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI+L+ L ++ LGMSGS + H+HV + T K + +DPR Sbjct: 59 LIDLDKGLLLLH-LGMSGSLRFIRDQAPPGV----HDHVDLV------TSKGVLRLHDPR 107 Query: 121 RFGFMDLVETSLKY-QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L LG EP +F L + +K LL ++V G Sbjct: 108 RFGALVYAANEDDAVAQKLLGGLGMEPLSETFTEAALLAGLKASRAPVKQVLLAGRLVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY EAL+ A + P + +L I+ VL A++ GGS+LRD+ Sbjct: 168 VGNIYASEALFLAGIRPTVAGNLIGPIRA------RRLHAAIKTVLARAVELGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + DG G+FQ+ +VYG+ G PC CG+ ++ I Q RS+++C CQ+ Sbjct: 222 SNADGMAGHFQHEANVYGRAGAPC-HRCGRAVQMIRQGQRSSYFCPGCQR 270 >gi|298346955|ref|YP_003719642.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] gi|298237016|gb|ADI68148.1| formamidopyrimidine-DNA glycosylase [Mobiluncus curtisii ATCC 43063] Length = 321 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 94/331 (28%), Positives = 137/331 (41%), Gaps = 54/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G ++ RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGARLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------- 94 K+L L +G L++++HLGMSG +E K Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 95 --QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA----- 147 H + +L N + +++ D R FG ++L P PEP Sbjct: 121 LLPHERLRFTLDNEKD-----LVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGV 175 Query: 148 --------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 D + + H +K LL+Q IV+GIGNIY E L+ A++ P Sbjct: 176 EHIARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQSIVSGIGNIYADEGLFAARIHPAAP 235 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGK 258 RSL L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ Sbjct: 236 GRSLSDR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGR 289 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ C CG + +++ GRS+ +C CQ+ Sbjct: 290 GGQSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|254994376|ref|ZP_05276566.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J2-064] Length = 212 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 73/229 (31%), Positives = 119/229 (51%), Gaps = 17/229 (7%) Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L N +I+ HL M G F + + + +H H+ ++T + + D R Sbjct: 1 LFDLT-NCTILSHLRMEGKFRLMD----EKEEVSKHTHIIFHFEDHTELR-----FLDVR 50 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG M++ + + ++ LGPEP +F K + +K ALL+QK+VAG+ Sbjct: 51 KFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGV 110 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E + AK+ P R SL + ++ + + ++ +A+ GGS++R YV Sbjct: 111 GNIYADEICFEAKVRPERAANSLSDKE------IKRIFEATKSIMTEAVALGGSTVRTYV 164 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +G +Q+ VYGKT EPC+ CG+ I +I GR T +C CQK Sbjct: 165 NSQGKLGQYQDKLKVYGKTDEPCV-VCGKPIEKIKLNGRGTHFCPNCQK 212 >gi|295835423|ref|ZP_06822356.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] gi|197696491|gb|EDY43424.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] Length = 287 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T + + L+ P +A G ++ V R K+ Sbjct: 1 MPELPEVEALRDFLDTHLVGRTPARVLPVAVSVLKTYDPPP--SALVGHEVTAVRRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + +G ++ HL +G + A P K + + + L + + + + Sbjct: 59 LALGTDGGPHLVTHLARAGWLRWQDEVPAAPPKPGRGPLALRLVLDDGSG---FDLTEAG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + + T+ P + LGP+P F+ + LK AL +Q +VA Sbjct: 116 TQKRLAVYV--TADPMTVPGIARLGPDPLAPGFDRAAFAALLRGERRQLKGALRDQSLVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP + L + +L + ++ L +A+ Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETD------RLYEALRTTLTEAVTRSRGIAAG 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + A S YC CQ Sbjct: 228 RLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|291298922|ref|YP_003510200.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] gi|290568142|gb|ADD41107.1| DNA-formamidopyrimidine glycosylase [Stackebrandtia nassauensis DSM 44728] Length = 286 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + F A G++I V R K+L Sbjct: 1 MPELPEVEALADFLRRRAVSHEVKRVDVASITALKTFDPP-PTALHGRRITAVDRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL +G A P++ +H + ++L + + + + Sbjct: 60 DLDAD-GTHLIFHLARAGWLRWNDKLAATPLRPGKHPLALRLALDDGSG---FDLSEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V S Q P + LGP+P SF + + +K L +QK++AG Sbjct: 116 KKRLAVYVV--SDPAQVPGIAGLGPDPLAESFTEAAFAAVLSGRRTQIKGLLRDQKLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + SL + + + ++ ++ + + + L+ + Sbjct: 174 IGNAYSDEILHAARMSPFKLADSLTDTDVSV--LYEAMVDTLRTAVAASSGSAAKDLKAH 231 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H ++ V+G+ G+PC CG I + A + YC CQ Sbjct: 232 KH---------DSLRVHGRAGQPC-PVCGDTIAEVSFADSALQYCPTCQ 270 >gi|330723666|gb|AEC46036.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Mycoplasma hyorhinis MCLD] Length = 278 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + N V + L+++ L + +KI+ V + K+ Sbjct: 1 MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTVEQLENWFVNEKILSVKNKGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ + +I HL ++G + ++S +P HNH+ I +NT + YND Sbjct: 61 IVFYFSNDKILISHLRLNGKYFFNNSSKKEP-----HNHLMIQFDDNT-----FLHYNDT 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + T PL +GP P + S L ++ K ++K LL+Q+IV+G Sbjct: 111 RMFGTFHIKTTKDYLNTTPLSNVGPTPMEIS--EEELFNKLQKSKRSIKPTLLDQQIVSG 168 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ + P+ K + +N L + + +L+ +I+ GGS++ Y Sbjct: 169 LGNIYVDEVLFACSIHPLTKAFLINKNE------LKLIKKFATSILLKSIELGGSTINSY 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G FQN V+ K G C S C +I +I GR T+ C+ CQ Sbjct: 223 SSLNMQEGNFQNFLQVHTKKGFAC-SRCNNIIEKITVGGRGTYICSNCQ 270 >gi|304389334|ref|ZP_07371299.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327452|gb|EFL94685.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 321 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 96/331 (29%), Positives = 137/331 (41%), Gaps = 54/331 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC--LHRKNLRF--DFPHHFSAATRGKKIIDVSRR 56 MPELPEVE IRRNL + V H + LR A G + RR Sbjct: 1 MPELPEVETIRRNLEQTVVGARVLGASDPTHERTLRNQQGGITGLRAGLVGACLGAAVRR 60 Query: 57 AKYLLIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------- 94 K+L L +G L++++HLGMSG +E K Sbjct: 61 GKFLWFPLLGDTPREKGPLALVMHLGMSGQLRVESRGATLHRKEAAASPQAAPQHSRETR 120 Query: 95 --QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA----- 147 H V I+L N + +++ D R FG ++L P PEP Sbjct: 121 LLPHERVRITLDNGKD-----LVFCDQRTFGHVELRPLQPTADGAPGGMGAPEPLLPQGM 175 Query: 148 --------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 D + + H +K LL+Q IV+GIGNIY E L+ A++ P Sbjct: 176 EHIARDVLDPCRDTTDFVKKTHASTRAIKTKLLDQGIVSGIGNIYADEGLFAARIHPAAP 235 Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDYVHIDGSIGYFQNAFSVYGK 258 RSL L KL+ + V+ A+ GG+S R YV+ G+ G F VYG+ Sbjct: 236 GRSLSDR------KLRKLLGAVAAVMEQALVFGGTSFDRLYVNSWGNPGEFAKELQVYGR 289 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ C CG + +++ GRS+ +C CQ+ Sbjct: 290 GGQSC-HRCGTRLDKMIIDGRSSVFCPRCQR 319 >gi|238020718|ref|ZP_04601144.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] gi|237867698|gb|EEP68704.1| hypothetical protein GCWU000324_00608 [Kingella oralis ATCC 51147] Length = 198 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 16/214 (7%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGS + + +H+HV I+ N T + Y+DPRRFG + + ++ Sbjct: 1 MSGSLRVWQGNAPA---AGKHDHVDIAFANGT-----LLRYHDPRRFGAILWLAGVAEH- 51 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L+ LG EP + F A YL K+ +K AL+N KIV G+GNIY E+L++A ++ Sbjct: 52 HDLLKDLGVEPLSDDFTADYLFQALQKRGCPVKTALMNNKIVVGVGNIYANESLFQAAIA 111 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R +SL + L ++++L AI+ GGS+LRD+V+ +G GYFQ + V Sbjct: 112 PQRAAKSLRKTE------CAALTAAVKQILRRAIETGGSTLRDFVNSEGKSGYFQQEYKV 165 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YGKT +PC CG I + V R TFYC CQ+ Sbjct: 166 YGKTDQPCAH-CGTPIVKTVIGQRGTFYCPTCQR 198 >gi|117165133|emb|CAJ88687.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces ambofaciens ATCC 23877] Length = 287 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + + ++ + SA G ++ V R K+L Sbjct: 1 MPELPEVEALREFLTEHLVDREIVRVLPVAISVLKTYDPPLSA-LEGHQVAAVHRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E G ++ HL +G + +P K P V + + + Sbjct: 60 DVETAGGPHLVTHLARAGWLHWKDSLPDGPPRPGKGPLALRVAL-----DTGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + + P + LGP+P + F+ + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVV--ADPREVPGVARLGPDPLADDFDEARFAALLDGERRQLKGALRDQSLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP + SL +L + ++ L +A++ Sbjct: 173 AGVGNAYSDEILHAAKMSPFKLAASLTDEET------ARLYEALRATLTEAVERSRGVAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 227 GRLKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 271 >gi|149922617|ref|ZP_01911045.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816503|gb|EDM76000.1| formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 286 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 142/296 (47%), Gaps = 24/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR L V + NLR + H RG V RR Sbjct: 1 MPELPEVESVRRGLARARLKTPVVKLWRSSFNLRTGKNWLRKHEGLEQLRGATPGPVRRR 60 Query: 57 AKYLLIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KY+L + EG L +++HLGMSG + H H + ++ + Sbjct: 61 GKYILWHMQGADEGELVLLIHLGMSGRCGVARADQPI----VDHTHFIATFADDRQLR-- 114 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + DPRRFG + + Y+ P+ LGPEP F+ L K L++ALL Sbjct: 115 ---FVDPRRFGGLKVGTRETIYEREPVAALGPEPLSEDFDGAVLEAALGKSKRALRDALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ VAGIGNIY EA + A+L+P+R SL + + + KL + VL + G Sbjct: 172 DQRAVAGIGNIYAVEACFEARLNPLRPAASLSRRSWS------KLADALVLVLERGVRNG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++L+D+ ++ G +G Q+ VYG+ GEPC CG+ + V RS CT CQ Sbjct: 226 GTTLKDFRNVVGEVGRNQDDLRVYGRGGEPC-PRCGRRLADFVSQNRSGVMCTRCQ 280 >gi|302555694|ref|ZP_07308036.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302473312|gb|EFL36405.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 287 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L + + + ++ F SA G ++ V R K+L Sbjct: 1 MPELPEVEALKDFLTEHLVGHQIVRVLPVAISVLKTFDPPLSA-VEGHEVAAVRRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 I ++ HL +G + +P K P + + + Sbjct: 60 DIATADGPHLVTHLARAGWLQWKDRLPDGPPRPGKGPLALRAALE-----TGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +VE + P + LGP+P + F+ L + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVVEDPQE--VPGVARLGPDPLADDFDERRLAELLAGERRQLKGALRDQSLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP + SL +L ++ L DA++ Sbjct: 173 AGVGNAYSDEILHAAKMSPFKLAASLSAAETG------RLYAALRDTLTDAVERSRGVAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GEPC CG IR + + S YC CQ Sbjct: 227 GRLKAEKKSG-----LRVHGRAGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|238810071|dbj|BAH69861.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 274 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 2 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 61 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 62 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ N L ++ KN +K LL+Q V+G Sbjct: 113 RQFGTFHIKTKGTLYTTKPLDKVAKIPSET--NIKELFNKIKNKNIPIKQLLLDQSFVSG 170 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ + L K+I+ K++ A + GGSS+ Y Sbjct: 171 IGNIYANETLFATQINPLTPSKNIT------FEQLEKIIKAAAKIMDQATELGGSSIDTY 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 225 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 274 >gi|319777154|ref|YP_004136805.1| DNA glycosylase [Mycoplasma fermentans M64] gi|6537224|gb|AAF15568.1|AF179376_3 foramidopyrimidine DNA gycosylase [Mycoplasma fermentans] gi|318038229|gb|ADV34428.1| DNA glycosylase [Mycoplasma fermentans M64] Length = 273 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 18/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + ++L + N + I + L + F + +DV+ AK+ Sbjct: 1 MPELPEVRSVVKDLRPKVVNRKIVKIDILHPKLIKEVSVEEFKNFLINETFLDVNNLAKH 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ L N ++ HL MSG + + K +H+++ L +N+ + YND Sbjct: 61 IIFSLTNNKYLLSHLRMSGKYFTHY----KYRPATKHDYLIFHLDDNSC-----IYYNDS 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+FG + Y PL + P++ N L ++ KN +K LL+Q V+G Sbjct: 112 RQFGTFHIKTKGTLYTTKPLDKVAKIPSET--NIKELFNKIKNKNIPIKQLLLDQSFVSG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +++P+ ++++ + L K+I+ K++ A + GGSS+ Y Sbjct: 170 IGNIYANETLFATQINPLTPSKNIT------FEQLEKIIKAAAKIMDQATELGGSSIDTY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +DG G FQ+ V+G + C I +I R T+YC QK Sbjct: 224 TSVDGVKGQFQDFLQVHGHFNDVCKRCKKAKINKIFINKRGTYYCPNYQK 273 >gi|333023009|ref|ZP_08451073.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332742861|gb|EGJ73302.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 287 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + T T + + L+ P +A G ++ DV R K+ Sbjct: 1 MPELPEVEALRDFLDDHLVGRTPTRVLPVAVNVLKTYDPPP--SALVGHEVTDVRRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + +G ++ HL +G + P K + + + L + + + + Sbjct: 59 LDVVTDGGPHLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSG---FDLTEAG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V+ P + LGP+P F+ + LK AL +Q +VA Sbjct: 116 TQKRLAVYVVDDP--RTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVA 173 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L AKLSP + L + + +L + ++ L +A+ Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAG 227 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG IR + A S YC CQ Sbjct: 228 SLKAEKKSG-----LRVHGRTGESC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|239917410|ref|YP_002956968.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414104|ref|ZP_06245846.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838617|gb|ACS30414.1| DNA-(apurinic or apyrimidinic site) lyase /Formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 305 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 145/304 (47%), Gaps = 28/304 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPE E++RR L + ++ + P RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRSPGGADALRERLRGARLAEPARRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + L EG+ +++VHLGMSG +++ A + +H + + +T + + + + Sbjct: 61 KFLWLPLAEGDDAVVVHLGMSGQILVDEPGAA----DQRHLRLRLPVTAADGSAR-ELRF 115 Query: 117 NDPRRFGFMDLVE------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG L + + +P F+ + + ++ S LK A Sbjct: 116 VDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPAAVHARLARRRSTLKRA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A++ Sbjct: 176 LLDQSLVSGIGNIYADEALWGARLHPERPTERMRRADTL------RLLAAVQDVMRRALE 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-----IRRIVQAGRSTFYC 284 GG+S YV++DG GYF + + YG+TG+PC C I R R++ C Sbjct: 230 VGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPC-RRCAAEGVDSRIVREPFMNRASHLC 288 Query: 285 TYCQ 288 CQ Sbjct: 289 PRCQ 292 >gi|318060353|ref|ZP_07979076.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actG] Length = 287 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNM---TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V + ++ P +A G ++ DV R Sbjct: 1 MPELPEVEALRDFLDDHLVGRIPTRVLPVAVNVLKTYDPPP----SALVGHEVTDVRRYG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIY 116 K+L + +G ++ HL +G + P K + + + L + + + + Sbjct: 57 KFLDVVTDGGPRLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSG---FDLTE 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + +V+ P + LGP+P F+ + LK AL +Q + Sbjct: 114 AGTQKRLAVYVVDDP--RTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSL 171 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GN Y E L AKLSP + L + + +L + ++ L +A+ Sbjct: 172 VAGVGNAYSDEILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIA 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + A S YC CQ Sbjct: 226 AGSLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 271 >gi|227495871|ref|ZP_03926182.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] gi|226834548|gb|EEH66931.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Actinomyces urogenitalis DSM 15434] Length = 350 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 134/351 (38%), Gaps = 69/351 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF---DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +RR L + VT + + F G+++ RR Sbjct: 1 MPELPEVEAVRRGLERHLVGRVVTGVEVLEPRALRRQEGGVEAFIRGLAGRRLEAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN------------------------ 93 K+L + L+ ++ HLGMSG ++ T+ A + Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTAPATSARGQEPGPVGDAPAADAVVADPSVPRV 120 Query: 94 -----------------PQHNHVTISLT----NNTNTKKYRVIYNDPRRFGFMDLVE--- 129 P+H V + LT + + D R G + L E Sbjct: 121 DLTATRAPSLVRDLSVRPRHLRVRLHLTSREADPHPQAGAALDLVDQRMLGGLRLSEMVA 180 Query: 130 ----------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + + D + + + + +K L++Q++V+G Sbjct: 181 TSDGASGGEGSPQPFLPQDAAHIARDLLDPAVDHDGVLARMRSSRRGVKALLMDQELVSG 240 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD- 238 +GNIY E LW A++ RSL G +L++ +V+ A+ GG+S Sbjct: 241 VGNIYADEGLWAARVHAASPGRSLGPRVG------RRLLEATAEVMRRALKVGGTSFDAL 294 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV +G+ G+F YG+ G+ C CG ++R V RS +C CQ+ Sbjct: 295 YVDAEGAAGFFARELEAYGRAGQEC-RRCGATMQRQVIGARSHTFCPRCQR 344 >gi|194246472|ref|YP_002004111.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] gi|193806829|emb|CAP18258.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma mali] Length = 270 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE++ R+L + + + +I + + + F +KI++++R+ KYL Sbjct: 1 MPELPEVEVVVRSLKKNLIDKKIINIKVLYEPIVGKL-DIFKKIL-NQKILNLTRKGKYL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ HL M G + + +H H + L NN + + D R Sbjct: 59 IFFFSNELVLVGHLRMEGKLYFKPSDEII----VKHEHFVLFLENN-----ISLRFKDTR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +FG + E Q L L EP + +F+ K ++KN+LL+QKI+AG Sbjct: 110 KFGRFIVYEQKNYLQSSKLEHLALEPFEISTFD---FYQILKNKKKSIKNSLLDQKIIAG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+ +K+ P ++ + K++ +++ AI GG+S+ + Sbjct: 167 LGNIYANEVLFLSKIHPANRSCDITFEQT------EKILNYSKQIFKQAILLGGTSINTF 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G FQ V+GK + CL C + I +I GR T++C+ CQ Sbjct: 221 -DSLGIQGSFQKKLLVHGKEKQSCLVCC-KPIMKIKLGGRGTYFCSNCQ 267 >gi|226315118|ref|YP_002775014.1| formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] gi|226098068|dbj|BAH46510.1| putative formamidopyrimidine-DNA glycosylase [Brevibacillus brevis NBRC 100599] Length = 268 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 125/288 (43%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E RR L + T+T + R+ P F+ + ++ V RR K+L Sbjct: 1 MPELPEMENYRRLLQEKIGGGTITATHVQREKTINLPPAEFARLLQDNRLTLVDRRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LE +++HL + G + + K + VT+S R++Y Sbjct: 61 LFHLESGHVLLLHLMLGGFLYL----GSAEDKLKRTAQVTLSFGE-------RLLYFHGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L+ + L LGPEP D F T K S LK AL+NQ +AGI Sbjct: 110 RLGYLHLLTNVQIDE--RLAPLGPEPLDPLFTFTRFTELLADKRSVLKTALVNQHWLAGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A + P R +L +L +Q VL +AI GG + Sbjct: 168 GNCYADEICFHAAILPTRTIPTLSLEEQ------KRLYHSMQTVLTEAIRFGGYMQPLF- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F VY + GEPC CGQ I + + R F C CQ Sbjct: 221 QGDSLTGGFDERCQVYDRGGEPC-PRCGQPIEKSELSSRKVFACANCQ 267 >gi|326775044|ref|ZP_08234309.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326655377|gb|EGE40223.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G + V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSA-LEGTTVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + + + + L + + R Sbjct: 60 DIE-AGGLHLCTHLARAGWLRWKDSFPAAPPRPGK-GPLALRLITVDG-DGFDLTEMGTR 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + LGP+P ++F+ + +K AL +Q ++AGI Sbjct: 117 KRLSVHLVHDPA--DVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L + D + +L ++ L DA+ + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLDE------DDVTRLYTALRSTLQDAVTRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|182434517|ref|YP_001822236.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463033|dbj|BAG17553.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G + V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSA-LEGTTVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + + + + L + + R Sbjct: 60 DIE-AGGLHLCTHLARAGWLRWKDSFPAAPPRPGK-GPLALRLITVDG-DGFDLTEMGTR 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + LGP+P ++F+ + +K AL +Q ++AGI Sbjct: 117 KRLSVHLVHDPA--DVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L + D + +L ++ L DA+ + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLDE------DDVTRLYTALRSTLQDAVTRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|297204068|ref|ZP_06921465.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197714732|gb|EDY58766.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 287 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 120/291 (41%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ L + + + ++ + +A G++++ V R K+L Sbjct: 1 MPELPEVEALKDFLTENLVGHEMVRVLPVAISVLKTYDPPLTA-VEGREVVAVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E +G ++ HL +G + +P K P V + + + Sbjct: 60 DLETDGGPHLVTHLARAGWLHWKDRLPDGPPRPGKGPLALRVALE-----TGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + P + LGP+P F+ + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVVADPQE--VPGIARLGPDPLAEDFDGERFAALLKAERRQLKGALRDQTLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L A++SP + SL L + ++ L +A++ Sbjct: 173 AGVGNAYSDEILHAARMSPFKLAASLTPEET------ETLYRALRTTLTEAVERSRGVAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TG+PC CG IR + + S YC CQ Sbjct: 227 GRLKSEKKSG-----LRVHGRTGDPC-PVCGDTIREVSFSDSSLQYCPTCQ 271 >gi|283781572|ref|YP_003372327.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] gi|283440025|gb|ADB18467.1| DNA-formamidopyrimidine glycosylase [Pirellula staleyi DSM 6068] Length = 284 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----HRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ T+ D+ L R + G KI + R Sbjct: 1 MPELPEVETMRRGILKA-TGATIVDVQLEPCARRPIAIKPSLAVVQKSLIGTKISAIERL 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K +++ + +I+ M+G ++ + +H + I L + + Y Sbjct: 60 GKRVVVRAGDDFHLILEPRMTGLVLVSDP------PSREHLRLRIDL---AGSVLPSIWY 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R G + L T+ LGP+ + + + + + + +K ALL+Q+I Sbjct: 111 WDRRGLGSIQLYRTAELEAQLLSGKLGPDAL--AISKDDFSARLKRTSRAIKVALLDQQI 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG+GN+Y E L A + P + L + L L ++ +VL AI GS+L Sbjct: 169 VAGVGNLYASEILHLAAIDPKCRANKLTRQQ------LDLLHDKMLEVLHTAILHEGSTL 222 Query: 237 RD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Y + G +QN VY + EPC C I+RIVQA RSTF+C CQ+ Sbjct: 223 SDGTYRNALAQAGNYQNMHRVYDREHEPC-PTCLSPIQRIVQAQRSTFFCAACQR 276 >gi|242096492|ref|XP_002438736.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] gi|241916959|gb|EER90103.1| hypothetical protein SORBIDRAFT_10g025220 [Sorghum bicolor] Length = 399 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 117/301 (38%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE RR L + + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDDKVVVAAAGRAAFERAMVGRTIVAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSC---------AKPIKNPQHNHVTISLTNNTN 108 K L ++L+ GM+G+ I+ ++ +++ L + Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGVPVTNYKRSVVNSEEEWPSKYSKFFAELDDG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L E PP+ LGP+ + +K +K Sbjct: 119 ---LEFSFTDKRRFARVRLFEDPE--TVPPISELGPDALFEPMSVDDFLDSLGRKKIGIK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L+++++ P++ +L P++ L + IQ+V+ A Sbjct: 174 ALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNL------PRESCEALHRSIQEVVKYA 227 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +D + F + + + G+ G+ I I GR+T Y Q Sbjct: 228 VE-----------VDADMDRFPKEWLFHHRWGKKPGKVNGKKIEFITAGGRTTAYVPQLQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|328886861|emb|CCA60100.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 290 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 117/294 (39%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + SA G ++ ++R K+L Sbjct: 1 MPELPEVEALRAFLDTHLVGKEIARVLPVAISVLKTYDPPLSA-VEGAEVTAIARHGKFL 59 Query: 61 LIELEGN---LSIIVHLGMSGSFIIEHT---SCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + G L ++ HL +G + KP K P + T + + Sbjct: 60 DLTTTGPGGELHLLFHLARAGWLRWQDPLPSGPPKPGKGPLALRTAL-----TGGDGFDL 114 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + + +V + P + LGP+P F + +K AL +Q Sbjct: 115 TEAGTTKRLAVYVVRDPRE--VPGVARLGPDPLAEDFGPAEFAALLAGERRQIKGALRDQ 172 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AGIGN Y E L AK+SP + T++L L ++ L +A++ Sbjct: 173 SLIAGIGNAYSDEILHAAKMSPFKPTQNLTPTET------AALYAAMRTTLHEAVERSHG 226 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 227 LAAGRLKAEKKSG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 274 >gi|326507936|dbj|BAJ86711.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 408 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 114/301 (37%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE RR L +T + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRITRCAVADDPKVVVAAAGRVAFERAMVGRTILAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTN 108 K L + L+ GM+G+ I+ + K +++ + L + Sbjct: 61 KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSADDWPSKYSKFFVELDDG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L + PP+ LGP+ + KK +K Sbjct: 119 ---LEFSFTDKRRFARVRLFDDPE--TVPPISELGPDALFEPMSVDNFVDSLSKKKIGIK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L+++K P++ SL + + L Q IQ+V+ A Sbjct: 174 ALLLDQSFISGIGNWIADEVLYQSKTHPLQIASSLTR------ESCEALHQSIQEVVKYA 227 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D +D F + + + G+ G+ I I GR+T Y Q Sbjct: 228 VD-----------VDADCDRFPVEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPELQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|294155508|ref|YP_003559892.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] gi|291600003|gb|ADE19499.1| DNA-formamidopyrimidine glycosylase [Mycoplasma crocodyli MP145] Length = 274 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ L ++K + ++ ++ K ++ F + K I + KY Sbjct: 1 MPEYPEVTVVTNALNEIVKFKKIKEVIVNLDKIIKNVDVEKFKNTLKDKVIFSIENIGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++I+ E + SII H+ M G F E + ++N +H+ + + ++IYND Sbjct: 61 IVIKFESDWSIIAHMRMEGKFFYETNN---FLRNKKHDLIIFVFDDGN-----KLIYNDT 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RRFG MDL +P + LG P N +A + + +K + +K LL+Q++V G Sbjct: 113 RRFGTMDLHY-GDVNNFPKISKLGNLP--NQLDASKIMDKCKRKTTAIKTTLLDQELVLG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K++P+ K + + N ++ ++ +I+ GGS++ Y Sbjct: 170 IGNIYADEILYASKINPLTKAKDISLNQ------WKTILNFGHTIMTRSIELGGSTVNSY 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I+ G +QN VYGK E C + C +I GR T YC CQK Sbjct: 224 SSINNKEGSYQNELKVYGKYKEFCTT-CKSQFEKIKVNGRGTTYCPKCQK 272 >gi|325962918|ref|YP_004240824.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469005|gb|ADX72690.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 289 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ TV+ + + + FSA G+ + V R K++ Sbjct: 1 MPELPEVAGLAGFLDEHLRGSTVSKVQIVSFAVLKTADPPFSA-LEGRTVTGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRVIYNDP 119 I+ + +S + HL +G + +K + H ++ T + + + Sbjct: 60 SIDTD-GISFVFHLARAGWIRFTDSPTDAQLKMGKGHIAARLAFTGPGGPRGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V P + TLGP+P +F+A L + +K L NQ ++AG Sbjct: 119 KKSLAVYVVRDPQ--DVPGIATLGPDPFAEAFDAGMLAEILAGSSQQIKGLLRNQGVIAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP +SL + +LY I ++ + +A G +D Sbjct: 177 IGNAYSDEILHAARISPFATAKSLDRETV---QVLYNAIHDV--LGTALAEAAGKPPKDL 231 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+ +TG+PC CG +R + A + YC CQ Sbjct: 232 KDV------KRSHMRVHARTGQPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|108760481|ref|YP_634069.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108464361|gb|ABF89546.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] Length = 290 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 129/288 (44%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RRNL+ + + + A G+ + + RR KYL Sbjct: 1 MPELPEVEIARRNLVRWFSDRRIVRAESENTRIFRGAERQQFDALTGR-LESLVRRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG ++ HLGM+G F+ P ++ L + + ++DPR Sbjct: 60 LFAFEGGKGLMGHLGMTGKFVRRTEGQVAP-----YSRARFHLDDGHV-----IHFSDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG ++ + + +R LG +P + A L LK AL++Q+ ++G+ Sbjct: 110 MFGRLEPAPAARLRELDAVRILGRDPLADGLTAGQLQQAVGSSRKELKVALMDQERISGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EAL+RA L P R+ SL D +L+Q I+ ID G Sbjct: 170 GNIHAAEALFRAGLHPSRQPGSLTP------DEWKRLVQAIRAT----IDFGLKEQEGEE 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G +N F VYG+ G PC S CG + Q GR+T +C CQ Sbjct: 220 PVYLEEGRSENPFQVYGRAGSPC-SQCGTRVESFTQGGRTTHFCPRCQ 266 >gi|85860946|ref|YP_463148.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] gi|85724037|gb|ABC78980.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] Length = 311 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 28/288 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + + + + L +G+ I V+R K + Sbjct: 51 MPELPEVETLCRQLRQKVPHAKIKGTFILDSKL------GKLDNLKGRGIASVTRLGKRI 104 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+ S+ +HL M+G + + + P H+ + LT R+I DPR Sbjct: 105 VLGLDDGRSLEIHLRMTGRLLWQEK--PDIGEKPPHSRFILDLTPG------RIIIVDPR 156 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF + LV + K + L + ++ ++K+ L++Q I+ GI Sbjct: 157 RFATLSLVADAAKGNA------AVDALKPGC-PEALKEKGCNRSRSIKSFLMDQSIIGGI 209 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+RA L+P+R+T L + ++ + +VL A+ G+S+ D+ Sbjct: 210 GNIYACEILYRAGLNPLRRTADLTSED------WRRVGSAMVEVLSKAVVCRGTSISDWR 263 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q VYG+ G+ C +CG +I+R+ GR T++C CQ Sbjct: 264 DLFGCKGEYQKELRVYGREGKKC-PHCGGIIQRVRLLGRGTWFCPNCQ 310 >gi|71894461|ref|YP_278569.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] gi|71851249|gb|AAZ43858.1| foramidopyrimidine DNA gycosylase [Mycoplasma synoviae 53] Length = 281 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 20/293 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEV ++ ++L ++ + + L + + F K ++ K+ Sbjct: 1 MPEYPEVTVVCQSLSKLLLGKKINNCELLSEKFAKNSSVKDFEEFFNNKTFKKINNTGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + IVHL M G F I TS + + +H+H+ L N+ + YND Sbjct: 61 IEFIFDDKSRAIVHLRMEGKFFIRKTSDLEKYRF-KHDHIYFHLGNDET-----LAYNDS 114 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG + + K ++ L P D + YL + ++K LL+QK+V G Sbjct: 115 RGFGSFETISKENKLSVKEIKNLANLPKDVDID--YLYKKLQNTTRSIKTILLDQKLVLG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E L+ +K+ P+ K ++L + L L+ Q+++ ++I GGS++ Y Sbjct: 173 IGNIYADETLFASKIFPMEKAKNLSKAQ------LKTLMDNAQRIMDESIKLGGSTVHSY 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI----VQAGRSTFYCTYCQ 288 ++G G FQ VYG+ CL CG ++++ Q GR T YC CQ Sbjct: 227 QSVNGIDGKFQQRLKVYGRAKLNCLE-CGSFVKKVKLDFKQNGRGTSYCPNCQ 278 >gi|297155165|gb|ADI04877.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 288 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + L + + ++ + + G+ + V R K+L Sbjct: 1 MPELPEVEALAQILAERAVGREIARVHPAAVSVLKTYDPPLTD-LEGRTVTAVRRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +++HL +G P + + + + R Sbjct: 60 DLATD-GPHLVLHLARAGWLRWRDGLPEDPPRPGKGPLALRLRLAGPEGAGFDLTEAGTR 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + V + P + LGP+P SF +K L +Q ++AGI Sbjct: 119 KALSVYCVHDPQE--VPGIARLGPDPLAESFTLEEFAGLLRGVRHRIKGVLRDQSVIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP R L + + +L + + L DA++ + Sbjct: 177 GNAYSDEILHAARMSPYRLAGDLTEEE------VARLYEAMGATLRDAVERSLGPAARDL 230 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TG+PC CG M+R + A S YC CQ Sbjct: 231 KAEKRSG-----MRVHGRTGQPC-PVCGDMVREVSFADSSLQYCPTCQ 272 >gi|241888677|ref|ZP_04775984.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] gi|241864700|gb|EER69075.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans ATCC 10379] Length = 285 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 97/305 (31%), Positives = 139/305 (45%), Gaps = 37/305 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----------LHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L V+ N + +I + + + FS + +GK+I Sbjct: 1 MPELPEVENIKFGLEEVVINKKIINITYSKVVEDSHKVGKMAIVKQKLSAFSDSVKGKEI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNT 109 +SRR KYL L II H GM+G+F + KN +H HV L+ Sbjct: 61 EKLSRRGKYLYFTLNEGY-IITHFGMTGAFFLVKDIAEITNKNYYKHQHVIFELSTGE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSN 166 +++Y+D RRFG +L ++ P L PEP D Y + + + Sbjct: 118 ---KLVYSDIRRFG--ELRYIDDITKFKPFINLAPEPFDKKAK-KYFLSKLEENKYREQS 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL + G GNIY CE L+R K+ P+ K L + L +E+ +L Sbjct: 172 IKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKES------LFKELIDILD 225 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--GQMIRRIVQAGRSTFYC 284 AI GGS++ DYVH DG G QN +YGK C G + + GRS+ +C Sbjct: 226 FAIKEGGSTISDYVHADGGEGNMQNFHQIYGKK------VCPLGHEVENVTIKGRSSHFC 279 Query: 285 TYCQK 289 CQK Sbjct: 280 PICQK 284 >gi|261314782|ref|ZP_05953979.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] gi|261303808|gb|EEY07305.1| formamidopyrimidine-DNA glycosylase [Brucella pinnipedialis M163/99/10] Length = 215 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 92/218 (42%), Positives = 120/218 (55%), Gaps = 12/218 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L M+ TV + +R +LRF FP +F+ G++I + RRAKYL Sbjct: 1 MPELPEVETVRRGLQPFMEGATVVRVEQNRPDLRFAFPENFAERLSGRRIEALGRRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA--------KPIKNPQHNHVTISLTNNTNTKKY 112 + L+ LSII HLGMSGSF IE + KN H+HV L Sbjct: 61 TVHLDDGLSIISHLGMSGSFRIEAEDAQGLPGGFHHERSKNSLHDHVVFHLMRPDG-ASA 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 R+IYNDPRRFGFM E ++P L+ LG EP N + L F + + LK ALL Sbjct: 120 RIIYNDPRRFGFMLFAEKGALEEHPLLKDLGVEPTGNLLSGEVLAALFKGRRTPLKAALL 179 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 +Q+++AG+GNIYVCEALWR R+ + Sbjct: 180 DQRLIAGLGNIYVCEALWRQG---FRRCARQARLQAKW 214 >gi|329767933|ref|ZP_08259445.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] gi|328838596|gb|EGF88199.1| formamidopyrimidine-DNA glycosylase [Gemella haemolysans M341] Length = 286 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 142/305 (46%), Gaps = 37/305 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC----------LHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L V+ N + D+ L++ + ++FS +GK I Sbjct: 1 MPELPEVENIKFGLEEVVINKQILDMKYSNVVTESHKLNKMAIVKQDINYFSENVKGKTI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNT 109 +SRR KYL L II H GM+G+F + KN +H HV L+ Sbjct: 61 EKLSRRGKYLYFTLNEGY-IITHFGMTGAFFLVKDISEITNKNYFKHQHVIFELSTGE-- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSN 166 ++IY+D RRFG + +E ++ P L PEP D Y + K+ + Sbjct: 118 ---KLIYSDIRRFGELRYIED--VTKFKPFVNLAPEPFDKKAK-KYFLDKLDENKYKDQS 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL + G GNIY CE L+R K+ P+ K L + L +E+ +L Sbjct: 172 IKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELSKKKKES------LFKELVDILE 225 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--GQMIRRIVQAGRSTFYC 284 AI GGS++ DYVH DG G QN +YGK C G + + GRS+ +C Sbjct: 226 LAIKEGGSTISDYVHTDGGEGNMQNFHQIYGKK------VCPLGHDVENVTIKGRSSHFC 279 Query: 285 TYCQK 289 CQK Sbjct: 280 PICQK 284 >gi|239978113|ref|ZP_04700637.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291450010|ref|ZP_06589400.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291352959|gb|EFE79861.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] Length = 286 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + TV + + L+ P + G++I V R K+ Sbjct: 1 MPELPEVEALREFLAVHAVGRTVERVLPVAFHVLKTYDPP--ATDLAGQRITAVDRYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + + G L ++ HL +G + T A P + + + + L + + + + Sbjct: 59 LDLTV-GPLHLVTHLARAGWLKWQDTVPAAPPRPGKGPLALRVVLDDGSG---FDLTEAG 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V P + LGP+P + F+ L ++ LK AL +Q ++A Sbjct: 115 TQKRLAVYVVRDPA--DVPGIARLGPDPLADGFDRDRLAALLAPESRLLKGALRDQSLIA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E L A+LSP + L T L + ++ L DA++ G Sbjct: 173 GIGNAYSDEILHAARLSPFKNAGRLTDEETT------ALYEALRTTLTDAVERGRGVAAG 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + V+GK GEPC CG IR + A S YC +CQ Sbjct: 227 HLKKEKKT-----NLRVHGKDGEPC-PVCGDTIRSVNFADSSLQYCPHCQ 270 >gi|197120708|ref|YP_002132659.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] gi|196170557|gb|ACG71530.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] Length = 280 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ P+H + L + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLRGAEEPA----PRHARAWLRLEGGGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIQPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + L I +DA Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAGA------KALAAGILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C I R+VQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPILRVVQAQRSTFFCPRCQR 280 >gi|39939160|ref|NP_950926.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] gi|39722269|dbj|BAD04759.1| formamidopyrimidine-DNA glycosylase [Onion yellows phytoplasma OY-M] Length = 276 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 136/290 (46%), Gaps = 24/290 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+II L + + + + + + F I+D+ R+ K+L Sbjct: 1 MPELPEVQIIVDFLKKKLIGKKIVATKVFYETVVKNT-KEFQK-IEQTTILDIQRKGKFL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYND 118 L L L +I HL M G I KP P+H H I L + K + Y D Sbjct: 59 LFFLTQELVLIGHLRMEGKLFI------KPCDEPKHKYEHFAIILED-----KSSLRYYD 107 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R+FG ++ ++ L L +P + N L + K S LK LLNQKI++ Sbjct: 108 FRKFGRFEVKNQNIFLTQTTLHQLALDPFEI--NPAVLYQKILKTKSALKKVLLNQKIIS 165 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIYV E L+ KL P K L + +++ QKVL AI GG+++ Sbjct: 166 GLGNIYVNEVLFLVKLHPETKACELSLEQ------VQEIVTISQKVLTKAIKMGGTTVST 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G IGYFQN V+GK +PC+ NC I +I GR T+ C CQ Sbjct: 220 FESQPGIIGYFQNKLQVHGKVNKPCI-NCQTKIIKIKVGGRGTYLCPVCQ 268 >gi|220915420|ref|YP_002490724.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953274|gb|ACL63658.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 280 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARALEGARFAGIRRIG 60 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ P+H + L + Sbjct: 61 KHLLVALERGGAPVGLLAHLGMTGKWVLRGAEEPA----PRHARAWLRLDGGGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + P + LGP+P ++ + L K +K LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFEDVPEVAALGPDPLEHGIDPAALAGALAKSRLPVKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA++ P R +R+L + I +DA Sbjct: 172 RLLPGVGNIHASEACFRARVDPRRPSRALSRAEAKALAA------AILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C I R+VQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRKGGRTSPIARVVQAQRSTFFCPRCQR 280 >gi|115469160|ref|NP_001058179.1| Os06g0643600 [Oryza sativa Japonica Group] gi|51535473|dbj|BAD37370.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|51535507|dbj|BAD37426.1| putative formamidopyrimidine-DNA glycosylase 1 [Oryza sativa Japonica Group] gi|113596219|dbj|BAF20093.1| Os06g0643600 [Oryza sativa Japonica Group] gi|215694501|dbj|BAG89494.1| unnamed protein product [Oryza sativa Japonica Group] Length = 400 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 113/302 (37%), Gaps = 37/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 MPELPEVE RR L + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNT 107 K L + L+ GM+G+ I+ K +++ + L + Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDG- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RRF + L E PP+ LGP+ ++ +K + Sbjct: 120 ----LEFSFTDKRRFARVRLFEDPE--TVPPISELGPDALFEPMSSDSFADSLSRKKIGI 173 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++++ P++ SL + + L Q IQ+V+ Sbjct: 174 KALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSR------ESCEALHQSIQEVVKY 227 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A++ +D F + + + G+ GQ I I GR+T Y Sbjct: 228 AVE-----------VDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQL 276 Query: 288 QK 289 QK Sbjct: 277 QK 278 >gi|118464184|ref|YP_880320.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254773947|ref|ZP_05215463.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|118165471|gb|ABK66368.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 287 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISA-LHGQTVVGAERWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + E L +I HL +G A P++ + + + L + + + Sbjct: 60 GLRTE-GLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGSPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ + P + LGP+ D + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDPA--RVPGIAALGPDALD--LDVDALADLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|222635968|gb|EEE66100.1| hypothetical protein OsJ_22131 [Oryza sativa Japonica Group] Length = 405 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 113/302 (37%), Gaps = 37/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 MPELPEVE RR L + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALEAHCVGRRIARCAVADDPKVVVAAAGGRVAFERAMVGRTIVAARRR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNT 107 K L + L+ GM+G+ I+ K +++ + L + Sbjct: 61 GKNLWLRLDAPPFPSFQFGMAGAIYIKGVPVTKYKRSVVSSTDEWPSKYSKFFVQLDDG- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + D RRF + L E PP+ LGP+ ++ +K + Sbjct: 120 ----LEFSFTDKRRFARVRLFEDPE--TVPPISELGPDALFEPMSSDSFADSLSRKKIGI 173 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++++ P++ SL + + L Q IQ+V+ Sbjct: 174 KALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSR------ESCEALHQSIQEVVKY 227 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A++ +D F + + + G+ GQ I I GR+T Y Sbjct: 228 AVE-----------VDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQL 276 Query: 288 QK 289 QK Sbjct: 277 QK 278 >gi|41406987|ref|NP_959823.1| hypothetical protein MAP0889 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395338|gb|AAS03206.1| hypothetical protein MAP_0889 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 287 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRHAVGLPIGRVDVAALSVLKTFDPPISA-LHGQTVVGAERWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + E L +I HL +G A P++ + + + L + + Sbjct: 60 GLRTE-GLFLIAHLSRAGWLRWSDRLTAAPLRPGKGPIALRVHLGTPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ + P + LGP+ D + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDPA--RVPGIAALGPDALD--LDVDALADLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSDKQ------LATLHDAMVTVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|302562223|ref|ZP_07314565.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302479841|gb|EFL42934.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 287 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A G+++I V R K+L Sbjct: 1 MPELPEVEALRDFLSEHLVGHEIVRVLPVAISVLKTYDPPLTA-LEGREVIAVHRYGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E +G + HL +G + + +P + P V + + + Sbjct: 60 GLETDGGPYFVTHLARAGWLQWKDRLPSGPPRPGRGPLALRVALE-----TGAGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + P + LGP+P F+ L + LK AL +Q ++ Sbjct: 115 GTQKRLAVYVVADPAE--VPGVARLGPDPLAGDFDERRLADLLSGERRRLKGALRDQGLI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L A++SP + SL T +L + ++ L +A++ Sbjct: 173 AGVGNAYSDEILHAARMSPFKLAASLTPEETT------RLYEALRGTLTEAVERSRGVAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 227 GRLKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 271 >gi|643609|gb|AAA61988.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 181 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 13/194 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG + T + L LGPEP + FN YL + KK + +K L++ K+V G+ Sbjct: 110 RFGA--WLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGV 167 Query: 181 GNIYVCEALWRAKL 194 GNIY E+L+ A + Sbjct: 168 GNIYASESLFAAGI 181 >gi|225442888|ref|XP_002263635.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 403 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 + ++L+ GM+G+ I+ + K +++ + I L + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+E PP+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLEDPA--SVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKA 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +AGIGN E L+ A++ P++ SL + + L Q I++V+ A+ Sbjct: 174 LLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTR------ESCETLHQCIKQVIEKAM 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + G S + F + + + + +P + G+ I I GR+T Y Q Sbjct: 228 EVGADSSQ-----------FPSNWIFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|302036203|ref|YP_003796525.1| bifunctional DNA-formamidopyrimidine glycosylase/DNA lyase [Candidatus Nitrospira defluvii] gi|300604267|emb|CBK40599.1| DNA-formamidopyrimidine glycosylase and DNA-(apurinic or apyrimidinic site) lyase [Candidatus Nitrospira defluvii] Length = 287 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E+ R L + TV D + R+++ + R KI V R+ K + Sbjct: 1 MPELPEAEVAARQLRERVVGATVRDCWIGREDIVREGLLSLEQY-RQAKITGVERKGKSV 59 Query: 61 LIEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + ++ LGM+G + TS K+P H H + L + + Y Sbjct: 60 ILHFLCGKEPRFLVAELGMTGLLLFRSTST----KHPHHTHFVLHL---DGCSEPDIRYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 +PRRFG + L++ + +Y R G +P S S LK+ L++Q+++ Sbjct: 113 NPRRFGRLSLLDQAGLERYVA-RRFGYDPLTISH--EQFLCVLRATRSRLKSLLMHQQVI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ L P + + ++ P+ + +L Q + +VL +AI GGSS+R Sbjct: 170 AGIGNIYANEILFRSCLHPNQPSNTI------PEKSIVRLHQVMGEVLREAIAMGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DY DG+ G +++ VY K GEPC + CG +I R RS+FYC CQ+ Sbjct: 224 DYFAPDGTEGQYKSRHLVYAKAGEPCPNACGTVICR-SVGERSSFYCPTCQR 274 >gi|197294837|ref|YP_001799378.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] gi|171854164|emb|CAM12157.1| Formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma australiense] Length = 271 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 131/288 (45%), Gaps = 20/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+II L + + + + +F FS K I+D+ R+ K+L Sbjct: 1 MPELPEVQIIVNILKSKLIGAKIIKTKVFYAPVIKNF-EAFSQ-IEEKTILDIQRKGKFL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L L II HL + G ++ S H + N+ + Y D R Sbjct: 59 LFFLTQKLVIIGHLRLEGKLFLKPASNPHEATE----HFVLFFDND-----LSLRYYDFR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG ++ L L +P + F + K + LK LLNQKI++G+ Sbjct: 110 KFGRFEVQNQKDFLTKTTLNQLASDPFEIDFM--TFYQKVVKSKTALKKVLLNQKIISGL 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIYV E L+ AKL P K L + + +++ +KVL AI GGSS+ + Sbjct: 168 GNIYVNEVLFLAKLHPETKACDLNPSQ------VQNILEIAKKVLKKAIFFGGSSISTFE 221 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G+ G FQN V+GK PC + C I +I GR T+ C CQ Sbjct: 222 PEEGTKGSFQNHLLVHGKQKIPC-TVCMTNIIKIKVGGRGTYLCPSCQ 268 >gi|282862765|ref|ZP_06271826.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] gi|282562451|gb|EFB67992.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. ACTE] Length = 286 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A + + V R K+L Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARVLPVAISVLKTYDPPLTA-LQDTTVTAVDRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 I G L +++HL +G + A P + + + LT+ + + + Sbjct: 60 DI-TAGGLHLLIHLARAGWLRWQDGVPAAPTRPGKGPLALRTVLTDG---EGFDLTEMGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + LV P + LGP+P +SF+ + +K AL +Q ++AG Sbjct: 116 TKRLSVHLVRDPA--DVPGVARLGPDPLADSFDRDAFALLLGGQRRQIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + T SL N+ L L ++ L DA++ Sbjct: 174 IGNAYSDEILHVARMSPFKLTTSLSDND------LTHLYTAMRATLKDAVERSRGVAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ G+ C CG I + + + YC CQ Sbjct: 228 LKAEKKSG-----MRVHGRAGQAC-PVCGDTILEVSFSDSALQYCPTCQ 270 >gi|239945857|ref|ZP_04697794.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239992325|ref|ZP_04712989.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291449313|ref|ZP_06588703.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291352260|gb|EFE79164.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + +A ++ V+R K+L Sbjct: 1 MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLTA-LERTRVTSVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE G L + HL +G + + A P + + + + L T+ + + + Sbjct: 60 DIE-AGGLHLCTHLARAGWLRWKDSFPAAPPRPGK-GPLALRLV-TTDGDGFDLTEMGTK 116 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + TLGP+P ++F+ +K AL +Q ++AGI Sbjct: 117 KSLSVHLVHDP--VDVPRIATLGPDPLADTFDRDAFAALLAGARRQIKGALRDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP ++T L + D + +L ++ + DA+D + Sbjct: 175 GNAYSDEILHVAKMSPFKRTADLTE------DDVTRLYTALRTTVRDAVDRSSGVEAGKL 228 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG I + + S YC CQ Sbjct: 229 KAEKKTG-----MRVHGRTGEAC-PVCGDTILEVSFSDSSLQYCPTCQ 270 >gi|153003174|ref|YP_001377499.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026747|gb|ABS24515.1| formamidopyrimidine-DNA glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 276 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 25/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN---LRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + I K R P F+ G + + R Sbjct: 1 MPELPEVEIAARNLRRWTMGRRIERIEPDPKARYVFRPATPTAFARGLEGARFGPIRRIG 60 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ ++ + + ++ HLGM+G ++ A + + L + + Sbjct: 61 KHLLVSMKKDGAPVGLLAHLGMTGKWLRREGDAA----PSRFSRARFHLDDGAV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++D R FG + +V + + + LGP+P + + L + +K +++Q Sbjct: 112 HFDDMRLFGRLRVVPGARFEEVREIAELGPDPLEQGIDLDRLAEALGRSRLAVKVRIMDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++ G+GNI E+L+ AK+ P R+ RSL + KL I + + I S Sbjct: 172 ALLPGVGNIVASESLFLAKIDPRRQARSLTPAE------VRKLADGILATVKETIAREDS 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV GS +N F VY + GE C I R+VQA RST+YC CQ+ Sbjct: 226 PEISYVEEPGS----ENPFLVYAREGERCPRCRRAEIVRVVQAQRSTYYCPRCQR 276 >gi|329938480|ref|ZP_08287905.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329302453|gb|EGG46344.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 286 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI---CLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + VT + +H P +A +G+ + V R Sbjct: 1 MPELPEVEALRDFLTGHLVGREVTRVLPLAVHVLKTYDPPP----SALQGRTVTAVHRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+L ++ E L ++ HL +G + +P K P V + + + Sbjct: 57 KFLDLDAE-GLHLVTHLARAGWLHWRDRLPETPPRPGKGPLALRVAL-----DTGAGFDL 110 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++ + +V + + P + LGP+P F+ L + LK AL +Q Sbjct: 111 TEAGTQKRLAVYVVRDAAE--VPGVARLGPDPLAADFDEARLAGLLAGERRQLKGALRDQ 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AG+GN Y E L A++SP + T SL +++L + ++ L +A++ Sbjct: 169 GLLAGVGNAYSDEILHAARMSPFKPTASLTPEE------IHRLYEALRGTLTEAVERSRG 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG +R + + S YC CQ Sbjct: 223 VAAGRLKAEKKSG-----LRVHGRTGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 270 >gi|145637016|ref|ZP_01792680.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269874|gb|EDK09813.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 191 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 103/202 (50%), Gaps = 13/202 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + +K + I + + LR+ A +K+I +SRRAKYL Sbjct: 1 MPELPEVETTKNGISPYLKGAIIEKIVVRQPKLRWMVSEEL-AQITQQKVIALSRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+LE +I HLGMSGS + +H+H+ I + N V YNDPR Sbjct: 60 IIQLETGY-MIGHLGMSGSLRVVEKGDLID----KHDHLDIVVNNGKV-----VRYNDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RFG E ++P LGPEP F++ YL + KK + LK L++ +V G+ Sbjct: 110 RFGAWLWTEK--LNEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRS 202 GNIY E L+ L P + +R Sbjct: 168 GNIYANETLFLCNLHPQKNSRE 189 >gi|254819353|ref|ZP_05224354.1| hypothetical protein MintA_05478 [Mycobacterium intracellulare ATCC 13950] Length = 287 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L +TV + + ++ F SA G+ ++ R KYL Sbjct: 1 MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPISA-LHGQTVVGADRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + + +L ++ HL +G A P++ + + + L + + Sbjct: 60 GLRTD-DLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV Q P + +LGP+ D L +K + +QK++AG Sbjct: 119 QKRVAVWLVSDPQ--QIPQIASLGPDALD--LGPDDLARVLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L + L L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSEKQ------LAALHDAMITVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|313665519|ref|YP_004047390.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] gi|312949704|gb|ADR24300.1| DNA-formamidopyrimidine glycosylase [Mycoplasma leachii PG50] Length = 274 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 139/290 (47%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINRTIIKSEIFSNKIVSSISVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL II HL M+G ++IE K+ L NN + + D Sbjct: 61 IVFEL-KEYVIISHLRMTGKWVIEDPEQYAYKKSWL--KAEFLLDNNLVAR-----FYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTNANLITKDQTKEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +QN V+ + C C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQNKLFVHL-NNKNC-KLCNTKISKIKVNGRGTYYCSNCQK 274 >gi|29833831|ref|NP_828465.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|29610955|dbj|BAC75000.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L + V + + L+ P A G++I V R K+ Sbjct: 1 MPELPEVEALKDFLADHVVGHEVVRVLPVAISVLKTYDPP--VTALEGREITAVRRHGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +E + L + HL G + +P K P V + + + Sbjct: 59 LDLEAD-GLHFVTHLARGGWLHWRDKLPDAPPRPGKGPLALRVALETGEG-----FDLTE 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + +V P + LGP+P + F+ + +K AL +Q + Sbjct: 113 AGTQKRLAVHVVRDPG--DVPGVARLGPDPLADDFDEARFARLLEGERRRIKGALRDQSL 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN Y E L AK+SP + T +L + +L ++ L +A++ Sbjct: 171 IAGVGNAYSDEILHAAKMSPFKLTSALTAEE------IRQLYAALRTTLTEAVERSRGLA 224 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGEPC CG IR + + S YC CQ Sbjct: 225 AGRLKAEKKTG-----LRVHGRTGEPC-PVCGDTIREVSFSDSSLQYCPTCQ 270 >gi|115372595|ref|ZP_01459902.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|310823827|ref|YP_003956185.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|115370316|gb|EAU69244.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca DW4/3-1] gi|309396899|gb|ADO74358.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1] Length = 281 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 130/288 (45%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI RRNL+ + V + +A +G+ + + RR KYL Sbjct: 1 MPELPEVEIARRNLVRWIGPRRVVKAEADDTRVFRGAERARFSALKGR-VESLERRGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L E ++ HLGM+G F+ +P ++ L + T + + DPR Sbjct: 60 LWTFEAGRGLLAHLGMTGKFVRRQKGQPEP-----YSRARFHLEDGTV-----IHFRDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG M+ V S +++LG +P ++ L +LK AL++Q +AG+ Sbjct: 110 LFGRMEPVPASELRALEAIQSLGRDPLEDGLTGPQLAEAVGTSRQDLKVALMDQGRLAGL 169 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI+ EAL+RA L P RK +L + +L + I + ++ Y+ Sbjct: 170 GNIHAAEALFRAGLHPARKPDTLTPED------WKRLARAIHATIAFGLEEQEGEEPVYL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +N F VYG+ G+PC C + QAGR+T C CQ Sbjct: 224 ----EDGGAENVFRVYGRAGQPCQ-VCQSPVESFTQAGRTTHVCPECQ 266 >gi|121593321|ref|YP_985217.1| formamidopyrimidine-DNA glycosylase [Acidovorax sp. JS42] gi|166215605|sp|A1W4G6|FPG_ACISJ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|120605401|gb|ABM41141.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Acidovorax sp. JS42] Length = 271 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + + LR+ A G+++ V RR KY Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVGKP-LRWPLGTE-PAVLVGRRVCGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A+ H+H + T + +DPR Sbjct: 58 LLLDLDEGLLLIHLGMSGSLRFARDLPAR----GAHDHFELITDQGT------LRLHDPR 107 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L G EP F K + +K LL +V G Sbjct: 108 RFGAVVWAAGESDPRARKLLDGWGLEPLGEDFAFETFHAGLRAKRTPIKQLLLAGTVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A + P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLAGIRPTTRACAIGPQRA------RRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G+FQ +VYG+ G PC CG +R + Q RST++C +CQ+ Sbjct: 222 SSADGSAGHFQLEANVYGRAGLPC-RQCGTPVRLLRQGQRSTYFCPHCQR 270 >gi|327541806|gb|EGF28318.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 300 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 127/302 (42%), Gaps = 29/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH----RKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISP-IVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--- 113 K +++ + +++ M+G ++ +P H + I + N R Sbjct: 60 GKRVMLCFDDQSRLVIEPRMTGLVLLADP------PDPDHLRLRIQFRSPHNGSTMRSRE 113 Query: 114 ----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ D R G + + T Y LGP+ S A L +K Sbjct: 114 IPTEMLVWDRRGLGTIRWM-TERDYLEKVDSRLGPDAM--SITAEQLRENLAASKRPIKV 170 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q VAGIGN+Y E L+ A + P + L + ++ I VL DAI Sbjct: 171 ALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQ------WERIHPAITLVLQDAI 224 Query: 230 DAGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C C Sbjct: 225 NHEGSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGC 284 Query: 288 QK 289 Q+ Sbjct: 285 QR 286 >gi|86156705|ref|YP_463490.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773216|gb|ABC80053.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 280 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH---RKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVEI RNL + V ++ R+ R P F+ A G + + R Sbjct: 1 MPELPEVEIAARNLRRWAEGRRVEEVGWDPRARRIFRPATPAAFARAVEGARFAGIRRIG 60 Query: 58 KYLLIELEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 K+LL+ LE + ++ HLGM+G +++ P+H + L + + Sbjct: 61 KHLLVSLERGGAPVGLLAHLGMTGKWVLRAAGDPA----PRHARAWLRLEGDGV-----L 111 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 + D R FG + V + + P + LGP+P ++ + L LK LL+Q Sbjct: 112 HFQDSRLFGRLRTVPGARFDEVPEVAALGPDPLEDGIDPAALAGALAASRLPLKVKLLDQ 171 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++ G+GNI+ EA +RA+L P R +R+L + L I +DA Sbjct: 172 RLLPGVGNIHASEACYRARLDPRRPSRTLSRAGA------KALAAGILASFRMTLDAEDG 225 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTFYCTYCQK 289 YV G+ +N F VY + GEPC C IRRIVQA RSTF+C CQ+ Sbjct: 226 PEITYVEEPGA----ENPFLVYAREGEPC-PRCRRAGRTSPIRRIVQAQRSTFFCPRCQR 280 >gi|330944159|gb|EGH46278.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 213 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 19/232 (8%) Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 K L+I+ E ++I HLGMSG+ + +H HV I L + + Y Sbjct: 1 KCLMIQAEVG-TLISHLGMSGNLRLVEAGLPAL----KHEHVDIELESG-----LALRYT 50 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 DPRRFG M + + + L LGPEP + F+ L + K+ +K +++ +V Sbjct: 51 DPRRFGAMLW--SLDPHNHELLIRLGPEPLTDLFDGERLYERSRGKSIAVKPFVMDNAVV 108 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GNIY EAL+ A + P R+ S+ + KL EI+++L AI+ GG++LR Sbjct: 109 VGVGNIYATEALFAAGIDPRREAGSVSRAR------YLKLAIEIKRILAYAIERGGTTLR 162 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D++ DG GYFQ YG+ G+PC CG +R + R++ YC CQ+ Sbjct: 163 DFIGGDGKPGYFQQELFAYGRGGQPC-KVCGTTLREVKLGQRASVYCPKCQR 213 >gi|83319527|ref|YP_424603.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283413|gb|ABC01345.1| formamidopyrimidine-DNA glycosylase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 274 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 141/290 (48%), Gaps = 17/290 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + K + F T+ +KI+D+ AKY Sbjct: 1 MPELPEVVTVTNTIKPSLINKTIIKSEIFSNKIVSSTSVEQFINLTKEQKILDIYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++ EL II HL M+G ++IE++ K+ L NN + + D Sbjct: 61 IVFEL-KEYVIISHLRMTGKWVIENSDQYAYKKSWL--KAEFLLDNNLVAR-----FYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L S + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKSTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTNANLITKDQTKEIIKNCENVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G +Q V+ + C C I +I GR T+YC+ CQK Sbjct: 227 ESLPGVTGSYQTKLFVHL-NNKNC-KLCNTKISKIKVNGRGTYYCSSCQK 274 >gi|226498176|ref|NP_001141023.1| hypothetical protein LOC100273102 [Zea mays] gi|194699240|gb|ACF83704.1| unknown [Zea mays] Length = 384 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 116/301 (38%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH---FSAATRGKKIIDVSRRA 57 MPELPEVE RR L + + F A G+ I+ RR Sbjct: 1 MPELPEVEAARRALQAHCVGRRIARCAVADDAKVVVAAAGRAAFERAMVGRTIVAARRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSC---------AKPIKNPQHNHVTISLTNNTN 108 K L ++L+ GM+G+ I+ ++ +H+ L + Sbjct: 61 KNLWLQLDAPPFPSFQFGMAGAIYIKGIPVTNYKRSVVNSEEEWPSKHSKFFAELDDG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + L E PP+ LGP+ + +K +K Sbjct: 119 ---LEFSFTDKRRFARVRLFEDPE--TLPPISELGPDALFEPMSVDSFLDSLGRKKIGIK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L+++++ P++ +L P++ L Q I++V+ A Sbjct: 174 ALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNL------PRESCEALHQSIEEVVKYA 227 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ +D + F + + + G+ G+ I I GR+T Y Q Sbjct: 228 VE-----------VDADMDRFPKEWLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|320007052|gb|ADW01902.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 286 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + + + ++ + + G + V+R K+L Sbjct: 1 MPELPEVEALRDFLGDHLVGKEIARVLPLAISVLKTYDPPVTE-LEGADVSAVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 I G+L +++HL +G + A P + + + LT + + Sbjct: 60 DI-TAGDLHLLIHLARAGWLQWKDGFPATPPRPGKGPLALRTVLTGGDG---FDLTEMGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + LV + P + LGP+P +SF+ +K AL +Q ++AG Sbjct: 116 TKRLAVHLVRDPAE--VPGVARLGPDPLADSFDRDAFAAVLGGARRQIKGALRDQSLIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP + T +L + T +L ++ L DA++ Sbjct: 174 IGNAYSDEILHVAKMSPFKLTSALGDEDVT------RLYDAMRTTLQDAVERSRGVAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + ++ V+G+TG+PC CG + + + S YC CQ Sbjct: 228 LKAEKK-----SSMRVHGRTGQPC-PVCGDTVLEVSFSDSSLQYCPTCQ 270 >gi|152964129|ref|YP_001359913.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] gi|151358646|gb|ABS01649.1| DNA-formamidopyrimidine glycosylase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 23/295 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + N+ + +A G + V RR K+L Sbjct: 1 MPELPEVEALATFLRERLVGRVVARVEVGALNVLKTYDPP-PSALGGLLVAGVVRRGKWL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL-------TNNTNTKKYR 113 ++++ L + VHL +G A P++ N V + + + + Sbjct: 60 DVDVD-GLHLAVHLSRAGWVRWSDALPAAPLRPGGKNPVALRVRLAPEDDEDPHRPPGFD 118 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + ++ + +V Q P + TLGP+P D++F+ +K L + Sbjct: 119 LTEAGTQKRLAVHVVRDPA--QVPGIATLGPDPLDDAFDEAAFASLLAGSRQQVKGLLRD 176 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN Y E L A+LSP L P + +L ++ L+DA+ A Sbjct: 177 QSVLAGVGNAYSDEVLHVARLSPYAIAGKL------PAPDVERLYDALRTTLLDAVAAAS 230 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+ G PC CG +R + A RS YC CQ Sbjct: 231 GKPAKELKDAKRAG-----LRVHGRAGLPC-PVCGDTVREVSFADRSMQYCATCQ 279 >gi|18404050|ref|NP_564608.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana] gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 390 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L +EL+ GM+G+ I+ + K +++ + L + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+ P+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKP 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L++A++ P++ SL K+ L I++V+ A+ Sbjct: 174 LLLDQGYISGIGNWIADEVLYQARIHPLQTASSLS------KEQCEALHTSIKEVIEKAV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + +D F + + + + +P + G+ I I GR+T Y Q Sbjct: 228 E-----------VDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|108801300|ref|YP_641497.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119870451|ref|YP_940403.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126437281|ref|YP_001072972.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|108771719|gb|ABG10441.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119696540|gb|ABL93613.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126237081|gb|ABO00482.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 287 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L + + + + ++ F +A G+++ D R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLPIGRVDVSAFSVLKTFDPPITA-LHGREVTDAHRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L +I HL +G A P+K + + + L + + Sbjct: 60 GLQ-AGDLYLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGAAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV S P + LGP+ + A L K++ +K + +QK++AG Sbjct: 119 QKRLAVWLV--SDPSAVPGIAALGPDALE--LTADELGVLLSKQSGRIKTVITDQKVLAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP L + L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAQLSPFATANKLTPEQ------VATLHDAMLSVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] Length = 390 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L +EL+ GM+G+ I+ + K +++ + L + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+ P+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKP 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L++A++ P++ SL K+ L I++V+ A+ Sbjct: 174 LLLDQGYISGIGNWIADEVLYQARIHPLQTASSLS------KEQCEALHTSIKEVIEKAV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + +D F + + + + +P + G+ I I GR+T Y Q Sbjct: 228 E-----------VDADSSQFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|320102895|ref|YP_004178486.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] gi|319750177|gb|ADV61937.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] Length = 288 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 27/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE + R L + + + + L F + V RR Sbjct: 1 MPELPEVETMARGLRPTLTGAKLGQVEVIDPKLLEGSGMSADRFVERVSESVVSHVGRRG 60 Query: 58 KYLLIELEGNLSII-VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L+ L G ++ + M+G F + HV I K V Sbjct: 61 KWLVWTLAGQRGLVVIQPRMTGGFWLIEPDRPH--------HVRILFPLPELGKT--VWL 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D RR G + + R+ GP+ + + L + + LK L++QK+ Sbjct: 111 TDARRLGRVLWFADQTQASAAFARSHGPDALEIERDD--LAARLARTARGLKPTLMDQKV 168 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGNIY E + A++ P +L + +L I +L+ AI A GSS Sbjct: 169 LAGIGNIYADEICFAARIHPEIPANTLSARQ------VDRLHAAISAILLRAIQAEGSSF 222 Query: 237 R-DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRSTFYCTYCQ 288 Y + G G F ++YG+ G+PC CG+ I + A GR T++C CQ Sbjct: 223 DAGYRTVLGLEGGFLAENAMYGRGGQPC-PGCGEPILKTRIAGLIGRPTYFCPICQ 277 >gi|307328100|ref|ZP_07607280.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306886219|gb|EFN17225.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 288 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 16/288 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + + ++ + S G I +R K+L Sbjct: 1 MPELPEVEALTAILAERAAGREIARVLPVAVSVLKTYDPPLSV-LEGHTITAAARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++VHL +G P + + L + + R Sbjct: 60 DLATD-GPHLVVHLAKAGWLRWRDGLPEAPPRPGKGPLALRLLLAGPERSGFDLTEAGTR 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V + P + LGP+P ++SF +K L +Q ++AGI Sbjct: 119 KGLAVYVVRDPQE--VPGIARLGPDPLEDSFTLEAFAGLLRGVRHRIKGVLRDQSVIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A++SP R L + + + ++ + + + L+ Sbjct: 177 GNAYSDEILHAARMSPYRLASDLTEEE--IAGVYEAMGATLRSAVERSHGLAATDLK--- 231 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + V+G+TG+PC CG +R + S YC CQ Sbjct: 232 ------GEKRGGMRVHGRTGQPC-PVCGDTVREVSFRDSSLQYCPTCQ 272 >gi|296169701|ref|ZP_06851319.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895698|gb|EFG75394.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F A G+ + R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVGALSVLKTFDPPL-GALHGRPVTGAHRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G L +I HL +G A P++ + + + L + + Sbjct: 60 GLQ-AGELFLITHLSRAGWLRWSDKLGAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV P + LGP+ + + L +K + +QK++AG Sbjct: 119 QKRLAVWLVTDPQ--TVPGIAALGPDALELGVDD--LAGLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L T + ++ ++ + ++ G ++L+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLTDEQLTT--LHDAMVSVLRDAVSRSVGQGAATLK-- 230 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 231 -------GEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 271 >gi|226226067|ref|YP_002760173.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] gi|226089258|dbj|BAH37703.1| formamidopyrimidine-DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27] Length = 264 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 87/289 (30%), Positives = 123/289 (42%), Gaps = 26/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE L + TV + + P A G + V RRAK Sbjct: 1 MPELPEVEYAASQLRDRVLGQTVQAVRVTHAAQARHLPSTDQQAIVGLTLDRVERRAKVQ 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + VH M+G ++ + P ++L + RV DPR Sbjct: 61 LLHFGSG-VLEVHFRMTGDWVFSRVTDPVPPFE------RLALETDAGL---RVSLVDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +GPEP ++F+ H ++ +K LL+Q++VAGI Sbjct: 111 ALSVVRWHAAGSYRGL----EVGPEPLSDAFSVDVFRHALTRRRGPIKPVLLDQRVVAGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY EALW A ++P ++ K L +L I+ VL A DA R + Sbjct: 167 GNIYASEALWEAGIAPTAIANTIT------KPRLTRLRDAIRVVLETAPDA-----RYFE 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VYG+ G PC CG IRR+VQAGRST+YC CQ+ Sbjct: 216 RDTPDEQERDRRWRVYGRDGRPC-RRCGSAIRRLVQAGRSTYYCAVCQR 263 >gi|291008458|ref|ZP_06566431.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 284 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + ++L +V + + ++ +S G+ + +R KYL Sbjct: 1 MPELPEVEALAQHLRDNATGRSVARVDIASLSVLKTVSPPWSE-LHGRTVTGATRYGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ E L ++ HL +G + P K + + + L + + Sbjct: 60 DLDCE-GLHLVFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGGG---VGFDLTEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ +VE + P + LGP+ S + LT + +K L +Q ++AG Sbjct: 116 QKKLSAWVVEDPAE--VPGIAKLGPDAL--SLDVEGLTAVLSGRTERIKTVLTDQSMIAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSP L D + +L ++++L DA++ Sbjct: 172 IGNAYSDEILHAAKLSPYATAGRLD------ADAVERLHATMREILTDAVERSLKQDAAR 225 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TG PC CG +R + A RS YC CQ Sbjct: 226 LKAEKRSG-----MRVHGRTGLPC-PVCGDKVREVSFADRSLQYCATCQ 268 >gi|118468423|ref|YP_889782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118169710|gb|ABK70606.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 288 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 24/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L V+ + + ++ F AA G + R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGRVVSRVDVSALSVLKTFDPP-VAALHGSTVTAAHRWGKYL 59 Query: 61 LIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIY 116 +E+E L +I HL +G P+K + + + L + ++ + + Sbjct: 60 GMEVESGGAPLHLITHLSRAGWLRWSDKLAPTPLKPGKGPIALRVHLGD---SQGFDLTE 116 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + +V P + +LGP+ S ++ L + +K + +QK+ Sbjct: 117 AGTQKRLAVWVVRDP--MDVPQIASLGPDAL--SLDSTALAGVLAGNSGRIKTVITDQKV 172 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L AKLSP L L L + VL DA+ S Sbjct: 173 MAGIGNAYSDEILHVAKLSPFTTAGKLTDAQ------LGALHDAMITVLTDAV-----SR 221 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 222 SVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 272 >gi|169628133|ref|YP_001701782.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus ATCC 19977] gi|169240100|emb|CAM61128.1| Putative formamidopyrimidine-DNA glycosylase [Mycobacterium abscessus] Length = 287 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L T+ I + ++ F +A G+ + +R KYL Sbjct: 1 MPELPEVEALADHLRRHATGATIGRIDISALSVLKTFDPPITA-LHGQPVTGATRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L ++ HL +G A P+K + + + L + + + Sbjct: 60 GLQ-AGDLYLVTHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGDAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V P + +LGP+ S A L + LKN + +Q++++G Sbjct: 119 QKRLAVWVVRDPA--AVPQIASLGPDAL--SLTADGLADILAGTTARLKNVITDQRVISG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSP ++L + L L + +Q VL DA++ Sbjct: 175 IGNAYSDEILHVAKLSPFASGKTLSEGQ------LTALYEAMQSVLTDAVERSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG ++R + A +S YC CQ Sbjct: 224 QQAATLKGEKRSGLRVHARAGMPC-PVCGDVVREVSFADKSFQYCPTCQ 271 >gi|222110042|ref|YP_002552306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] gi|254789435|sp|B9ME52|FPG_DIAST RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|221729486|gb|ACM32306.1| formamidopyrimidine-DNA glycosylase [Acidovorax ebreus TPSY] Length = 271 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 137/290 (47%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR+ ++ TV I + + LR+ A G+++ V RR KY Sbjct: 1 MPELPEVEVTRRSFAGAIEGATVRGITVGKP-LRWPLGTE-PAVLVGRRVCGVRRRGKY- 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ +++HLGMSGS A+ H+H + + T + +DPR Sbjct: 58 LLLDLDEGLLLIHLGMSGSLRFARDLPAR----GAHDHFELITDHGT------LRLHDPR 107 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 RFG + L G EP F K + +K LL +V G Sbjct: 108 RFGAVVWAAGESDPRARKLLDGWGLEPLGEDFAFEAFHAGLRAKRTPIKQLLLAGTVVVG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY CE L+ A + P + ++ +L I++VL A++ GGS+LRD+ Sbjct: 168 VGNIYACEVLFLAGIRPTTRACAIGPQRA------RRLHGAIREVLARAVERGGSTLRDF 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 DGS G+FQ +VYG+ G C CG +R Q RST++C +CQ+ Sbjct: 222 SSADGSAGHFQLEANVYGRAGLQC-RQCGTPVRLSRQGQRSTYFCPHCQR 270 >gi|42561208|ref|NP_975659.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492706|emb|CAE77301.1| formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320956|gb|ADK69599.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 274 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTNVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL II HL M+G ++IE++ K+ + L NN + + D Sbjct: 61 IVIEL-KEHVIISHLRMTGKWVIENSDQYAYKKSWL--RAELLLDNNLVFR-----FYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N +A YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSADYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L+ N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LVSANLITKDQTKEIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|32474898|ref|NP_867892.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32445438|emb|CAD75439.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 300 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 29/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH----RKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + + + + L R + RG+++ + RR Sbjct: 1 MPELPEVETMCRGISP-IVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRR 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--- 113 K +++ + +++ M+G ++ +P H + I + N R Sbjct: 60 GKRVMLCFDDQSRLVIEPRMTGLVLLADP------PDPDHLRLRIQFRSPHNRSTMRSRE 113 Query: 114 ----VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 ++ D R G + + T Y LGP+ A L +K Sbjct: 114 IPTEMLVWDRRGLGTIRWM-TERDYLEKVDSRLGPDAMCI--TAEQLRANLAASKRPIKV 170 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q VAGIGN+Y E L+ A + P + L + ++ I VL DAI Sbjct: 171 ALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQ------WERIHPAITLVLQDAI 224 Query: 230 DAGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + GS+L D Y + G +QN VY + C ++RRIVQA R+TF+C C Sbjct: 225 NHEGSTLSDGTYRNALNDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGC 284 Query: 288 QK 289 Q+ Sbjct: 285 QR 286 >gi|256384331|gb|ACU78901.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385164|gb|ACU79733.1| DNA-formamidopyrimidine glycosylase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455864|gb|ADH22099.1| DNA-formamidopyrimidine glycosylase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 274 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL II HL M+G ++IE++ K+ + L NN + + D Sbjct: 61 IVIEL-KEHVIISHLRMTGKWVIENSDQYAYKKSWL--RAELLLDNNLVFR-----FYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P+ + ++ ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINPLTSANLITRDQTN------EIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|126642855|ref|YP_001085839.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 208 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 19/219 (8%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++ HLGMSGSF + C + +H+H+ I + ++ Y+DPRRFG + + Sbjct: 1 MLWHLGMSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPRRFGCILWLN 50 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + Q + TLGPEP F+A YL + K+ +K AL++ +V G+GNIY E+L Sbjct: 51 P--ETQGKLIDTLGPEPLSTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESL 108 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 + + P + L + KL+ EI+++L AID GGS+LRDY + G GYF Sbjct: 109 FNVGIHPAQPAGDLTMQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYF 162 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Q YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 QQTLLAYGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 200 >gi|331703660|ref|YP_004400347.1| formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802215|emb|CBW54369.1| Formamidopyrimidine DNA glycosylase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 274 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 17/289 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-RKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + + + N T+ + + K + F T+ +KI DV AKY Sbjct: 1 MPELPEVVTVTNTIKPKIINRTILNSQIFTNKIISSTSVDQFINLTKNQKIYDVYNLAKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 ++IEL II HL M+G ++IE++ K+ + L NN + + D Sbjct: 61 IVIEL-KEHVIISHLRMTGKWVIENSDQYAYKKSWL--RAELLLDNNLVFR-----FYDM 112 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R FG ++L + L LGP P +N + YL ++ K N +K LL+Q +++G Sbjct: 113 RGFGTLNLYNKQTFLKDSHLDKLGPIPLNNQTSVDYLFNKLQKSNKAIKTVLLDQHVISG 172 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIYV E L+ +K++P L N KD ++I+ + VL AI G+++ D+ Sbjct: 173 LGNIYVNEVLFLSKINP------LTSANLITKDQTNQIIKNCETVLSQAILLKGTTISDF 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G +Q V+ + C C I +I GR T+YC+ CQ Sbjct: 227 ESLPGITGGYQTKLLVHM-NNKNC-KICDTKISKIKVNGRGTYYCSKCQ 273 >gi|290955721|ref|YP_003486903.1| formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] gi|260645247|emb|CBG68333.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces scabiei 87.22] Length = 289 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L+ + + + L+ P +A G++I DV R K+ Sbjct: 1 MPELPEVEALRDFLVGSLVGHEAVRVLPVAISVLKTYDPP--VSAFEGREITDVRRHGKF 58 Query: 60 LLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L IE +G L ++ HL +G + P + N + + + T + + + Sbjct: 59 LDIEADGGELHLVTHLARAGWLQWKDRLPDGPPRPGGRNPLALRVALETG-EGFDLTEAG 117 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V Q P + LGP+P + F+ + +K AL +Q ++A Sbjct: 118 TQKRLAVYVVRDPA--QVPGIARLGPDPLADEFDVTRFAGLLAGERRQIKGALRDQSLIA 175 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E L A++SP R T SL + L + ++ L +A++ Sbjct: 176 GIGNAYSDEILHAARMSPFRLTSSLKPEE------IRHLHEALRTTLTEAVERSRGLAAG 229 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GEPC CG +R + + S YC CQ Sbjct: 230 RLKAEKKSG-----LRVHGRAGEPC-PVCGDTVREVSFSDSSLQYCPTCQ 273 >gi|314919237|gb|EFS83068.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] Length = 256 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFPRVLDAYGRENEP 252 >gi|256372280|ref|YP_003110104.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] gi|256008864|gb|ACU54431.1| formamidopyrimidine-DNA glycosylase [Acidimicrobium ferrooxidans DSM 10331] Length = 275 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PEVE +R L ++ T+ I + R+ +R P A G+ I+ + R K+ Sbjct: 1 MPEAPEVERVREVLAARVEGATLEGIRMVGRRLVRRHDPELL-ATVSGRPIVSMRRIGKF 59 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ +L G +++VHLGM+G ++ S HV + L ++ + DP Sbjct: 60 LVFDL-GTDALVVHLGMAGRLVVSDASATA-------THVQLVLDF----RRAVITLVDP 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVA 178 R F + + L LGP+ A L + +K ALL+Q++VA Sbjct: 108 RTFSEAFVDVLGTDGRPRRLAGLGPDVFGPEEEIAASLERHAARSRRAIKTALLDQRVVA 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-- 236 G+GN+Y E L+R + P L + L + + V +A+ AGG++ Sbjct: 168 GLGNMYADETLFRVGVHPSTPMNVLGR-------RLVAIAEAAGDVAREALAAGGTTFAD 220 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R Y G F +VY + G PC C I R V GRS +C CQ+ Sbjct: 221 RAYRDPLDRPGAFGARLAVYQRAGSPC-PRCATSIVRRVLQGRSAHWCPRCQQ 272 >gi|289426426|ref|ZP_06428169.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|289153154|gb|EFD01872.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK187] gi|313763648|gb|EFS35012.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313794041|gb|EFS42065.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801429|gb|EFS42680.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313816826|gb|EFS54540.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829555|gb|EFS67269.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313839851|gb|EFS77565.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914650|gb|EFS78481.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314920853|gb|EFS84684.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930531|gb|EFS94362.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954309|gb|EFS98715.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957412|gb|EFT01515.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314963604|gb|EFT07704.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL082PA1] gi|314968564|gb|EFT12662.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA1] gi|315079458|gb|EFT51451.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315099275|gb|EFT71251.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100491|gb|EFT72467.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315109075|gb|EFT81051.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327451939|gb|EGE98593.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327455026|gb|EGF01681.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457686|gb|EGF04341.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755142|gb|EGF68758.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758080|gb|EGF71696.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] Length = 256 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|258644410|dbj|BAI39671.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Indica Group] Length = 409 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 118/301 (39%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ + ++ +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELS------KYKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + ++ PP+ LGP+ + +K + +K Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPE--AVPPISELGPDALFEPLHLDDFVESLSRKKAPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q V+GIGN E L++A++ P++ + K+ L Q I +V+ + Sbjct: 173 ALLLDQSFVSGIGNWIADEVLYQARIHPMQTASMIS------KEKCKALHQCIIEVIEKS 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +S + + + + + +P G+ I I GR++ Y Q Sbjct: 227 LEVGCNSSQ-----------YPENWIFHSREKKP-----GKKIDFITVGGRTSAYVPELQ 270 Query: 289 K 289 K Sbjct: 271 K 271 >gi|145222442|ref|YP_001133120.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315442889|ref|YP_004075768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|145214928|gb|ABP44332.1| DNA-formamidopyrimidine glycosylase [Mycobacterium gilvum PYR-GCK] gi|315261192|gb|ADT97933.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 287 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 124/289 (42%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F +A G+++ +R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVASLSVLKTFDPP-VSALVGREVTAANRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G+L +I HL +G A P+K + + + L Y + Sbjct: 60 GLQ-AGDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGEAPGYDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV L P + +LGP+ S T ++ +K + +QK+++G Sbjct: 119 QKRLAVWLVTDPL--AVPQIASLGPDAL--SLTLPAFTEMLSGESGRIKTVITDQKVISG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP L + D+ +I + + ++ ++L+ Sbjct: 175 IGNAYSDEILHVARLSPFATANKLTEAQRA--DLYDAMITVLTDAVTRSVGQQAATLK-- 230 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC C +R + A +S YC CQ Sbjct: 231 -------GEKRSGLRVHARTGLPC-PVCVDTVREVSFADKSFQYCATCQ 271 >gi|115475806|ref|NP_001061499.1| Os08g0304900 [Oryza sativa Japonica Group] gi|50508157|dbj|BAD30940.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|50508168|dbj|BAD30974.1| putative formamidopyrimidine-DNA glycosylase [Oryza sativa Japonica Group] gi|113623468|dbj|BAF23413.1| Os08g0304900 [Oryza sativa Japonica Group] gi|215693253|dbj|BAG88635.1| unnamed protein product [Oryza sativa Japonica Group] Length = 409 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 118/301 (39%), Gaps = 42/301 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ + ++ +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELS------KYKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + ++ PP+ LGP+ + +K + +K Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPE--AVPPISELGPDALFEPLHLDDFVESLSRKKAPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++A++ P++ + K+ L Q I +V+ + Sbjct: 173 ALLLDQSFISGIGNWIADEVLYQARIHPMQTASMIS------KEKCKALHQCIIEVIEKS 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ G +S + + + + + +P G+ I I GR++ Y Q Sbjct: 227 LEVGCNSSQ-----------YPENWIFHSREKKP-----GKKIDFITVGGRTSAYVPELQ 270 Query: 289 K 289 K Sbjct: 271 K 271 >gi|50842930|ref|YP_056157.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840532|gb|AAT83199.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|315106731|gb|EFT78707.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] Length = 256 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 MPELPEVE +R L + V + + F G++ V+R Sbjct: 1 MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + P PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------PQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q + V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRRHPETPCSRLSQSEAV------ELLQTARDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFFRVVDAYGREDEP 252 >gi|309810552|ref|ZP_07704370.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] gi|308435549|gb|EFP59363.1| putative formamidopyrimidine-DNA glycosylase [Dermacoccus sp. Ellin185] Length = 287 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 111/291 (38%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L + + + L + F A G + VSR K++ Sbjct: 1 MPELPEVSGLVGFLDERIVGRAIVGVELASIAVLKTFDPS-PQALAGLVVDAVSRHGKWI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCA---KPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 +E G LS++ HL +G +P K+P V + + + Sbjct: 60 ALETSGGLSLVFHLSRAGWLRWSDALPTTVLRPGKSPIALRVRF-----DDGSGFDLTEA 114 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V P + LG +P F + +K L +Q + Sbjct: 115 GTQKRLAVHIVRD--VVDVPGIAKLGIDPLSPEFTREAFGQLVASRRMQIKGLLRDQNEI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AKLSP T SL + L + L +A+DA Sbjct: 173 AGVGNAYSDEVLHVAKLSPFALTSSLEPGQ------IDTLYDALITTLTNAVDAAAGKPA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGE C CG +IR + A RS YC CQ Sbjct: 227 KDLKDAKRAG-----MRVHGRTGEAC-PVCGDVIREVSFADRSLQYCATCQ 271 >gi|119962635|ref|YP_948112.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949494|gb|ABM08405.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 293 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L + +T++ ++ L+ P + A G+ I+ R K+ Sbjct: 3 MPELPEVHGLCMYLDTQLHGAVLTEVRINSFSALKTADPPY--TALEGRTILGAKRIGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN---HVTISLTNNTNTKKYRVIY 116 + I+ + L + HL +G + ++ + N + + + + Sbjct: 61 VCIDAD-GLFFVFHLAKAGWVRYTEHPSSAGLRMGKSNISARLLLHRPADDAHIGVDLTE 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + +V+ P + TLGPEP F+ L + +K L +Q + Sbjct: 120 AGTKKSLAIYVVKDPQ--DVPGIATLGPEPLSPDFDLDALAGILGSSSQQIKGLLRSQSV 177 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L A++SP +SL Q + +L +Q+VL+ A++A Sbjct: 178 IAGIGNAYSDEILHAARISPFATAKSLDQA------TVARLYAAMQEVLVGAVNAAAGKP 231 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ F V+ +TG+PC CG +R + A S YC CQ Sbjct: 232 SSELKDTK-----RSNFRVHARTGQPC-PVCGDTVREVSFADTSLQYCPTCQ 277 >gi|289705862|ref|ZP_06502242.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] gi|289557405|gb|EFD50716.1| DNA-formamidopyrimidine glycosylase [Micrococcus luteus SK58] Length = 305 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 28/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPE E++RR L + ++ + P RG ++ + +RR Sbjct: 1 MPELPEAEVVRRGLARWATDAVAAELEVLDPRSLRRSPGGADALRERLRGARLAEPARRG 60 Query: 58 KYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K+L + L EG+ +++VHLGMSG +++ A + +H + + +T + + + + Sbjct: 61 KFLWLPLAEGDDAVVVHLGMSGQILVDEPGAA----DQRHLRLRLPVTAADGSAR-ELRF 115 Query: 117 NDPRRFGFMDLVE------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 D R FG L + + +P F+ + + + ++ S LK A Sbjct: 116 VDQRIFGGWWLDALRPDDAAGGERIPTTAAHIALDPLHPLFDPVAVHARLARRRSTLKRA 175 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +V+GIGNIY EALW A+L P R T + + + +L+ +Q V+ A++ Sbjct: 176 LLDQSLVSGIGNIYADEALWGARLHPERPTERMRRADTL------RLMAAVQDVMRRALE 229 Query: 231 AGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCG-----QMIRRIVQAGRSTF 282 GG+S YV++DG GYF + + YG+TG+PC C I R R++ Sbjct: 230 VGGTSFDALYVNVDGRSGYFARSLAAYGRTGQPC-RRCAAEGVDTRIVREPFMNRASH 286 >gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 118/289 (40%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + VT + + R+ F G I + RRAK+L Sbjct: 1 MPELPEMENYRLLLNERIAGQKVTGVEVTREKTINVPVQSFLKEVNGTIIEHIDRRAKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +L +++HL + G + + T T ++ Sbjct: 61 IFKLSNGKRLVLHLMLGGVLFLGNGENDPD-----------RTRQVTLTIGKIELFFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ LV + + LGPEP + +A K+ LK L+NQK ++GI Sbjct: 110 RLGYLHLVTQEEMEEQ--FKDLGPEPLQITIDA--FNELIKKRKGMLKTTLVNQKFISGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E + A+L P RK L + L Q IQ VL I GG + Sbjct: 166 GNLYSDEICYEARLLPERKMNELSTQE------VLDLFQSIQHVLRRGISQGGYMDPLF- 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + D G + VY + GE C S C I R + R FYC CQK Sbjct: 219 NGDAQTGNY--HAFVYDREGEAC-SRCQTHIVREEISSRKCFYCPNCQK 264 >gi|220912308|ref|YP_002487617.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] gi|219859186|gb|ACL39528.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] Length = 289 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L ++ +T + + + F+A G+ + V R K++ Sbjct: 1 MPELPEVAGLATFLDGQLRGAVLTKLQVVSFAVLKTADPPFNA-IEGRTVAGVRRFGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 I+ E +S++ HL +G + +K + V + + + + + Sbjct: 60 SIDTE-GMSLVFHLARAGWLRFTDSPADSQLKMGKGMIAVRCAFSGPDGPRGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + +V P + LGP+P +F+A L + +K L +Q ++AG Sbjct: 119 RKSLAVYVVRDPQ--DVPGIAALGPDPFTEAFDAGMLAEILGASSQQIKGLLRSQSVIAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DAGGSSLRD 238 IGN Y E L A++SP +SL + + + L + I +L +A+ +A G +D Sbjct: 177 IGNAYSDEILHAARISPFATAKSLDR------ETVQVLYEAIHGILGEAMAEAQGKPPKD 230 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+ +TG PC CG +R + A + YC CQ Sbjct: 231 LKDV------KRSHMRVHARTGLPC-PVCGDTVREVSFADTALQYCPTCQ 273 >gi|329947034|ref|ZP_08294446.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] gi|328526845|gb|EGF53858.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 170 str. F0386] Length = 351 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 84/346 (24%), Positives = 137/346 (39%), Gaps = 70/346 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + V RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTGVEVLDPRPLRRQDGGVRAFVDQLTGRTVTAVVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN------------------------ 93 K+L + L+ ++ HLGMSG ++ TS A Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTSPAAASDRDPAIRSAAAFLVDPDTRLGRRPVD 120 Query: 94 ----------------PQHNHVTISLTNN---TNTKKYRVIYNDPRRFGFMDLVETSLKY 134 P+H V + L+++ T + D R G + +V+ + Sbjct: 121 LSATERPRYVRDISASPRHLRVRVHLSSDPSADGTDGAVLDLVDQRMLGGLHVVDLTPTV 180 Query: 135 QYPPLRTLGPEPA---------DNSFNAIY-------LTHQFHKKNSNLKNALLNQKIVA 178 P PEP + + + + +K LL+Q +V+ Sbjct: 181 DGAPGGAGSPEPLLPADATHIARDLLDPALELAGPTGVVARVRASRRAIKTLLLDQGLVS 240 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY E LW A + +R +L ++ ++++ +V+ A++AGG+S Sbjct: 241 GIGNIYADEGLWEAGVHGLRLGTALDTR------VVARILEATAEVMRRALEAGGTSFDA 294 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 YV ++G+ G+F YG+ G+ C CG + R GRS Y Sbjct: 295 LYVDVEGASGFFARELGAYGRQGQAC-RRCGTTMLREALGGRSHTY 339 >gi|120405833|ref|YP_955662.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119958651|gb|ABM15656.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 297 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 29/299 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +TV + + ++ F SA G+++ +R KYL Sbjct: 1 MPELPEVEALADHLRRHAVGLTVGRVDVAALSVLKTFDPPISA-LYGQEVTGANRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISL----------TNNTNT 109 ++ G L +I HL +G A P+K + + + L Sbjct: 60 GLQ-AGELHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGPPGESPGPNVAAGAA 118 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + ++ + LV P + +LGP+ S L ++ +K Sbjct: 119 PGFDLTEAGTQKRLAVWLVTDP--MAVPQIASLGPDAL--SLTGQALAEVLGGQSGRIKT 174 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 + +QK++AGIGN Y E L AKLSP L + L L + VL DA+ Sbjct: 175 VITDQKVIAGIGNAYSDEILHVAKLSPFATANKLTPSQ------LVTLHDAMISVLTDAV 228 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 229 -----TRSVGQQAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 281 >gi|183984529|ref|YP_001852820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177855|gb|ACC42965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 287 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 117/289 (40%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L T+ + + ++ F +A G+ + R KYL Sbjct: 1 MPELPEIEALVDHLRRHAVGTTIGRVDVAALSVLKTFDPPINA-LHGQTVTGAGRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G L +I HL +G A P++ + + + L + + Sbjct: 60 GVQ-AGPLWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGVAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LVE Q P + TLGP+ + L +K + +QK++AG Sbjct: 119 QKRLAVWLVEDP--RQVPGIATLGPDALE--LGPEELAGVLGPHTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L + L L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCATCQ 271 >gi|317495934|ref|ZP_07954297.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] gi|316914111|gb|EFV35594.1| formamidopyrimidine-DNA glycosylase [Gemella moribillum M424] Length = 286 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 132/303 (43%), Gaps = 33/303 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL----------HRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE I+ L+ + N + + ++ + +F+ K I Sbjct: 1 MPELPEVENIKLGLVDQVLNKKIVGVSYSEIVKLGHSENKMTIVKQDLDYFANNVINKNI 60 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-QHNHVTISLTNNTNT 109 ++RR KYL L II H GM+G+F + KN H H+ L Sbjct: 61 EGLTRRGKYLYFTLSNGY-IIAHFGMTGAFFVVKDIAEITNKNYYNHRHIIFELD----- 114 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSN 166 K +++Y+D RRFG +L + P L PEP + Y + K+ Sbjct: 115 TKEKLVYSDIRRFG--ELRYIDEITMFKPFIDLAPEPFSQTAK-SYFLEKLESPKYKDQP 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL + G GNIY CE L+R K+ P+ K L + L E+ +L Sbjct: 172 IKALLLEGNVFCGCGNIYDCEVLYRQKIHPLTKASELTKKQK------ENLFDELVNILT 225 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 AI+ GGS++ D+VH DG G QN +YGK P G IV R++ +C Sbjct: 226 FAIEQGGSTISDFVHSDGGEGNMQNFHQIYGKKTCP----LGHKTDNIVIKTRASHFCPI 281 Query: 287 CQK 289 CQK Sbjct: 282 CQK 284 >gi|240172877|ref|ZP_04751536.1| hypothetical protein MkanA1_26427 [Mycobacterium kansasii ATCC 12478] Length = 287 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E + +L + + + + ++ F +A G + R KYL Sbjct: 1 MPELPEIEALVDHLRRHAVGLPIGRVDVAALSVLKTFDPP-VSALHGHTVTAADRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + + L +I HL +G A P++ + + + L + + Sbjct: 60 GLRAD-PLWLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGIPGEAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LV+ P + LGP+ + + L +K + +QK++AG Sbjct: 119 QKRLAVWLVDDP--KHVPGIAALGPDALE--LSTEDLAGLLAGNTGRIKTVITDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L L L + VL DA+ Sbjct: 175 IGNAYSDEILHVAKISPFATAGKLSAGQ------LATLHDAMVSVLSDAVHRSVG----- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAAMLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCPRCQ 271 >gi|312138559|ref|YP_004005895.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325676377|ref|ZP_08156056.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|311887898|emb|CBH47210.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325552938|gb|EGD22621.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + L V + + ++ F ++ +G+ + R K+L Sbjct: 1 MPELPEVEALAQFLRDHAVGAVVGRVDVAALSVLKTFDPPITS-LQGRNVTGADRFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + L +I HL G KP K P V T + T + + Sbjct: 60 ALDCD-GLWLIAHLSRGGWLRWIDNPGSAPPKPGKGPLAVRVHF-FTPDGETPAFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V L P + LGP+ + S +K AL++Q ++ Sbjct: 118 GTKKRLAVWVVTDPLL--VPGIARLGPDALE--VTRPQFGEILAGTTSRIKTALVDQSLL 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L A+LSP T L D + +L ++ L DA++ Sbjct: 174 AGIGNAYSDEILHAARLSPFATTSKLAP------DEVDRLYDAMRAELSDAVERSVGQEA 227 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G +V+ +TG PC CG +R + A RS YC CQ Sbjct: 228 ARLKGEKRAG-----MTVHARTGMPC-PVCGDTVREVAYAERSFQYCPTCQ 272 >gi|258650476|ref|YP_003199632.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] gi|258553701|gb|ACV76643.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] Length = 294 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 34/300 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + L +T + + N+ + ++A G+ + R K+L Sbjct: 1 MPELPEVTALAAFLTEHAGGQRITAVSVAALNVLTTYDPP-ASALVGRTVTGAGRHGKFL 59 Query: 61 LIELEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 + L +I+HL +G +P K + ++L+ Sbjct: 60 DLVTAPGPDASPGTPDALHLILHLARAGWLRWSDAISPRPPKMGGPIALRVALSGGGG-- 117 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + V ++ +V P + LGP+ D + L + +KN Sbjct: 118 -FDVTEAGTKKSVTAAVVTDP--RAVPGVARLGPDALD--LDRAALAQVLATQTGRIKNV 172 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L +Q+++AG+GN Y E L A+LSP L D L +L + VL DA+ Sbjct: 173 LTDQRVIAGVGNAYSDEILHTARLSPFATAAKLSP------DELDRLYDALATVLTDAVL 226 Query: 231 A--GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG + R G + V+ +TG PC CG ++ + A RS YC CQ Sbjct: 227 RSVGGQAAR-------LKGEKRTGLRVHARTGLPC-PVCGDVVAEVSFADRSFQYCPTCQ 278 >gi|255947552|ref|XP_002564543.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591560|emb|CAP97795.1| Pc22g05070 [Penicillium chrysogenum Wisconsin 54-1255] Length = 370 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL E+ I + + T++ + ++ F F A +GKKI+ ++ Sbjct: 1 MPELAEIHRIVHFIREHLVGKTLSKVQAQHDDIIFGKVGTSGAEFQKAMQGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I+ KP L + K Sbjct: 61 GKYFWMTMSSPPHAVMHFGMAGWLKIKDADTYYYRSDKPADQEWPPKYWKFLLETNDESK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADN--SFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + PL+ GP+P + + + +LT + KK + Sbjct: 121 TEAAFVDARRLGRIRLVDCPADEIRDHTPLKENGPDPVTDKDTVDEAWLTEKLGKKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L D + L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTL------NADQIKDLHSAIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I S + H F++ + GK +P + G I + GR++ Sbjct: 235 SIGVLADSEKFPEHWL-----FKHRWG-KGKKNQPAVLPNGDKITFLTVGGRTSAVVPAV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|300866461|ref|ZP_07111152.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300335505|emb|CBN56312.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 200 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 18/216 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY- 134 M+G + H +H V + + + D R FG M V + + Sbjct: 1 MTGQLLWVHRDDPLQ----KHTRVRLFFAEGRELR-----FVDQRTFGQMWWVPPTTEVS 51 Query: 135 -QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 L+ LGPEP F YL + H ++ ++K ALL+Q ++AG+GNIY EAL+ + Sbjct: 52 SAIAGLKKLGPEPFSEEFTVEYLAAKLHHRSRSVKTALLDQALIAGLGNIYADEALFLSG 111 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + L + +L I +VL +A++AGG++ ++++++G G + Sbjct: 112 VRSQTSCSDLTNEQ------IQRLHSAIIQVLENALNAGGTTFSNFLNVNGVNGNYGGIA 165 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + G+PC CG I R+ AGRS+ +C CQ+ Sbjct: 166 WVYNRAGQPC-RVCGTPIERLKLAGRSSHFCPQCQR 200 >gi|189425027|ref|YP_001952204.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] gi|189421286|gb|ACD95684.1| formamidopyrimidine-DNA glycosylase [Geobacter lovleyi SZ] Length = 271 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 36/296 (12%) Query: 1 MPELPEVEIIRRNL---MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + + L + V ++ + R ++ G DV R Sbjct: 1 MPELPEVESVLQCLTTSNPSLIGRLVREVRILRNSVIDGEASAVVQTVTGSTCCDVYRHG 60 Query: 58 KYLLIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 KYL +G+ + + +HL M+G + + +H + L + Sbjct: 61 KYLFFGFQGHSASKRVWLALHLRMTGRLFLV----PEQEIAERHTRFALLLDHG-----L 111 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 + ++DPR FG + LV+ + LGP+ + H LK LL Sbjct: 112 ALRFDDPRAFGRVWLVDDPSEVT----SKLGPDALLIQ--QKTFLDRLHGARRQLKPLLL 165 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q VAG+GNIY E L+RA+L P R + L + + + VL+ A+ A Sbjct: 166 DQGFVAGVGNIYADETLFRAQLHPARLSADLTSSEA------ERFYHALHGVLVQAVAAK 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ +IDG +VYG+ G PC+ CG +I + R T +C CQ Sbjct: 220 GA------NIDGVFEAGSFPVAVYGRGGRPCI-VCGTLIVKERLGQRGTHFCPVCQ 268 >gi|269956005|ref|YP_003325794.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269304686|gb|ACZ30236.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 75/297 (25%), Positives = 112/297 (37%), Gaps = 24/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R L + TV + F +A G + +R K+L Sbjct: 1 MPELPEVEGLVRFLDERSRGRTVAAADVGNIAALKTFDPPLTA-LVGATVRGWARHGKWL 59 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP----QHNHVTISLTNNTNTKK 111 + + + ++VHL G ++ V + Sbjct: 60 DLRTFTFDDDADPHLLVHLSRGGWLRWYDQVPTTTVRPRLGGSARGAVIALRVRFDDGTG 119 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + ++ + +V P + TLGPEP D +F L KN +K L Sbjct: 120 FDLTEAGTQKRLAVHVVRDP--RDVPQVATLGPEPLDPAFTVEALRALLGAKNQQVKGLL 177 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 +Q +AGIGN Y E L A+ SP + TRS D + +L I L A+ A Sbjct: 178 RDQGAIAGIGNAYSDEILHVARFSPFKLTRSFTP------DDVARLHAAIVDTLTGAVAA 231 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TG+ C CG +R + A RS YC CQ Sbjct: 232 SSGKPAKELKDAKRAG-----MRVHGRTGQAC-PVCGDTVREVSFADRSLQYCATCQ 282 >gi|218200905|gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group] Length = 415 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 119/302 (39%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ + ++ +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELS------KYKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + ++ PP+ LGP+ + +K + +K Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPE--AVPPISELGPDALFEPLHLDDFVESLSRKKAPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++A++ P++ + K+ L Q I +V+ + Sbjct: 173 ALLLDQSFISGIGNWIADEVLYQARIHPMQTASMIS------KEKCKALHQCIIEVIEKS 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYC 287 ++ G +S + + + + + +P + G+ I I GR++ Y Sbjct: 227 LEVGCNSSQ-----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPEL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|222640316|gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group] Length = 415 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 119/302 (39%), Gaps = 38/302 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI--- 115 L + L+ GM+G+ I+ + ++ +S T K +++ Sbjct: 61 NLWLALDSPPFPSFQFGMAGAIYIKGVELS------KYKRSAVSPTEEWPLKYSKLLVVM 114 Query: 116 -------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + D RRF + ++ PP+ LGP+ + +K + +K Sbjct: 115 DDGLEFSFTDKRRFAKIRFLDNPE--AVPPISELGPDALFEPLHLDDFVESLSRKKAPIK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q ++GIGN E L++A++ P++ + K+ L Q I +V+ + Sbjct: 173 ALLLDQSFISGIGNWIADEVLYQARIHPMQTASMIS------KEKCKALHQCIIEVIEKS 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYC 287 ++ G +S + + + + + +P + G+ I I GR++ Y Sbjct: 227 LEVGCNSSQ-----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPEL 275 Query: 288 QK 289 QK Sbjct: 276 QK 277 >gi|229495049|ref|ZP_04388795.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] gi|229317980|gb|EEN83855.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] Length = 288 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + L ++ HL +G + KP K P V T +T + + Sbjct: 60 ALDCD-GLWLVTHLSRAGWMRWLDNPSATPPKPGKGPLALRVHF-FTPEGSTPAFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + P + LGP+ + ++ +KN++++Q ++ Sbjct: 118 GTKKRLAVWVVNDPQE--VPGIARLGPDAM--AVTEAEFAQILGGTSARIKNSIVDQSLI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AKLSP + L D + L ++ L DAI+ Sbjct: 174 AGIGNAYSDEILHTAKLSPFATSSRLTP------DQISTLYAVMRSTLADAIER-----S 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ V+ +TG PC CG ++R + A RS YC CQ Sbjct: 223 EGQDAARLKGEKRSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYCATCQ 272 >gi|301166437|emb|CBW26013.1| formamidopyrimidine-DNA glycosylase [Bacteriovorax marinus SJ] Length = 270 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 132/292 (45%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I+ L +M + + + + H G+KII V R+ K L Sbjct: 1 MPELPEVETIKNQLNEIM---PIKVLECTQSKVISGIAHTPIE-LSGRKIIAVHRKGKLL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 EL+ N ++ HLGM+G + I P +HNH+ I K + Y DPR Sbjct: 57 YFELDKNEFLLSHLGMTGGWRIGKEKPTDP-NGVKHNHLCI------KHKGGYLSYVDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 RFG M ++ L LG + D ++ YL+ K N +K LL+QK+ AG Sbjct: 110 RFGHMYQLDK--LQTQEKLDELGVDLKDKAYTPEYLSTTIKKYPNRQIKVHLLDQKLYAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR-D 238 GN V E RA + P R+ +SL KD + K+ + V+ A GG++ + Sbjct: 168 TGNYIVNEICARAGVRPTRRNKSLT------KDEIIKMHKATAVVIDGATQTGGTTFQGG 221 Query: 239 YVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y GS G V Y K + C ++++ A R T+YC CQK Sbjct: 222 YADTTGSKGNGVGHLVVFYQKICQLCHE---TPVKKLYLAQRGTYYCPKCQK 270 >gi|300782065|ref|YP_003762356.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299791579|gb|ADJ41954.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 286 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L T+ I + ++ ++ G++I +R K+L Sbjct: 1 MPELPEVEALAHHLRENAVGRTIFRIDVASLSVLKTATPPWTE-LHGREITGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+L ++VHL +G A P+K + + + + + Sbjct: 60 DV-VAGDLHLVVHLARAGWLRWSDGLAAAPLKPGKGPISLRVHLESATGPGFDLTEAGTK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V+ + + LGP+ + +A L F KN+ LK AL +Q ++AGI Sbjct: 119 KGLAVWVVKDPQEIA--SVARLGPDAL--AVDAAQLRELFAGKNTRLKWALTDQSLLAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + RAKLSP L + L L + I + DA++ Sbjct: 175 GNAYSDEIMHRAKLSPYATIGKLDEG------ALETLAEAIHDIETDAVERSVG-----Q 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR I A +S YC CQ Sbjct: 224 KAARLKGEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCPTCQ 270 >gi|332527362|ref|ZP_08403418.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] gi|332111771|gb|EGJ11751.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Rubrivivax benzoatilyticus JA2] Length = 274 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 97/302 (32%), Positives = 141/302 (46%), Gaps = 42/302 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+ RR + ++ V + L K LR+ A G +++ V RR KYL Sbjct: 1 MPELPEVEVTRRGIDEPLRGAEVLAVRLG-KALRWPL-GVAPQALLGARVLPVQRRGKYL 58 Query: 61 LIELEGNL------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 + L G S+ +H A P P H+H + ++ T Sbjct: 59 WLPLLGGCGGGLLLHLGMSGSLALH-------------PAAPAPGP-HDHFDLVTSHGT- 103 Query: 109 TKKYRVIYNDPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 + DPRRFG + T+ L LG EP D + + + + Sbjct: 104 -----LRLTDPRRFGAVVWSPSTADPPAATLLAALGAEPFDATLTPQSFHAALQRHRTPI 158 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+ +IV G GNIY CEAL +A + P R + +L+Q +++ L Sbjct: 159 KAMLLSGRIVVGAGNIYACEALHQAGIHPATPCRRIGPLRA------ARLLQALRETLAQ 212 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI+ GGS+LRD+ G G FQ+ VYG+ GEPC CG +RR+VQA R+T++C C Sbjct: 213 AIELGGSTLRDFRDAHGMNGEFQHHARVYGRAGEPC-PRCGAAVRRVVQAQRATYFCAAC 271 Query: 288 QK 289 Q+ Sbjct: 272 QR 273 >gi|124516591|gb|EAY58099.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum rubarum] Length = 291 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 28/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII-DVSRRAKY 59 MPELPE E IR ++ + V I + + G+ + +V R K Sbjct: 1 MPELPEAEAIRLPVLRFFSDGVVESIRRGSNKNIWIGEEEYR---LGELFLFNVRRTGKV 57 Query: 60 LLIE--LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 L+ + + +I LGMSG+++I+H P H H+ IS N + R+ Sbjct: 58 LIFDWRTTKEKTAVLLISRLGMSGTWLIQHLREPL----PDHCHLVISFKNLAH----RL 109 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 +Y DPRRFG ++ T + L + GP+ A Q K + +++ LL+Q Sbjct: 110 VYRDPRRFGRLEW--TFEEESSVILASQGPDILKIP--ADEWHRQARKSSRTIRSLLLDQ 165 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 KI +GIGNIY E L+ A LSP R +SL + Y+++ +++L AI +GGS Sbjct: 166 KISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAAREILEAAIRSGGS 219 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + G G +Q+ VYG+ G+PC +C I+ + +A R+ FYC +CQK Sbjct: 220 TIHSFQTSLGEDGRYQDRHIVYGRAGKPC-PHCSTPIQSVKEASRTLFYCPFCQK 273 >gi|330984358|gb|EGH82461.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 258 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 25/273 (9%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 M + + LR G+ I+ +SR KY+LIEL ++ HLG Sbjct: 6 QRMVGKVFVTGEVLNERLREPVQSDLLLKISGQAIVSISRLGKYILIELTRG-HLVCHLG 64 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G +I S +H+ + S + T ++YND R+FGF ++ S + Sbjct: 65 MTGKLVINAESA-------KHDRIRFSFEDGTT-----LVYNDVRKFGF--VMYESDVAR 110 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 L LG EP +F+ L + +K LL+Q+ +AG+GNIYV E L+ +S Sbjct: 111 NKYLSHLGIEPLSEAFSPESLMAMAAGNRTPIKVFLLDQRKIAGLGNIYVNEVLYECGIS 170 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P TR L + +L+ I+ +L +I+ GGSS+ DY D G FQ+ F V Sbjct: 171 PHLLTRDLSSCQAS------RLVPAIKTMLKRSIELGGSSISDYRDADDKKGSFQDTFRV 224 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ + G + R Q GRSTFY Q Sbjct: 225 YGRD----FDHLGNAVTRATQGGRSTFYVEALQ 253 >gi|145229675|ref|XP_001389146.1| formamidopyrimidine-DNA glycosylase [Aspergillus niger CBS 513.88] gi|134055255|emb|CAK43841.1| unnamed protein product [Aspergillus niger] Length = 375 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T++ + + ++ + F A GKK+ ++ Sbjct: 1 MPELAEVSRIVHFLRQHLVGKTLSKVSVQNDDIIYGKAGTTAAEFQKAMEGKKVTGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHAVMHFGMAGWLKIRDADTYYYRTDKPGDKEWPPKYWKFLLETEGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + Y PL+ GP+P + + +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEEIRNYSPLKENGPDPVADKDIVSEEWLAKKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++AK+ P + + +L D + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYQAKIHPEQYSNTLDD------DQIRELHSAIHYICST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +++ S + F++ +S GK P + G+ I + GR++ Sbjct: 235 SVELLADSEKFPADWL-----FKHRWS-KGKKNTPSVLPNGEKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|251772775|gb|EES53337.1| Formamidopyrimidine DNA-glycosylase [Leptospirillum ferrodiazotrophum] Length = 279 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 139/300 (46%), Gaps = 38/300 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL----RFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE RR ++ V + I R+++ R F G +I+ RR Sbjct: 1 MPELPEVETTRRAILPVFTGRRIASITPLREDIWATGRRPPRGPF----TGGEIV---RR 53 Query: 57 AKYLLIEL--------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K L+ L + ++ GMSG + H + H H+ + + Sbjct: 54 GKTLIFSLIPDKADRSSPPIFLLSRFGMSGRWDRRHQGS----RPAPHTHLELLIPE--- 106 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + ++DPRRFG +++ + + + L GP+ S + L F + L+ Sbjct: 107 -EGVILAWSDPRRFGRLEISPSPDESR--LLAGTGPDAL--SLDGPSLFEIFRPLATPLR 161 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 AL N ++AGIGNIY+ E L+ A LSP R SL +L Q + ++L A Sbjct: 162 KALTNPALLAGIGNIYMAEILFDAGLSPFRPAGSLSLAEAC------RLSQSLHRILSSA 215 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ID+GGS++ Y DGS G +Q +VYG+ G PC CG ++R RS +YC CQ Sbjct: 216 IDSGGSTIHSYRQEDGSPGGYQKFHAVYGREGSPC-RRCGLPLQRTTVEARSLYYCALCQ 274 >gi|225559783|gb|EEH08065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 383 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 119/313 (38%), Gaps = 44/313 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRTYLVGKTITRVHAQDDPIVFGKAGTSAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFH 161 ++N + DPRR + LV+ ++ PL+ GP+P D +L + Sbjct: 121 SSN---SEAAFVDPRRLARVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ P+ + +L I Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTI------PEAQIEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-----CGQMIRRIVQ 276 V ++D G S + F + + G+ + G I I Sbjct: 232 NYVCSMSVDLLGDSEK-----------FPADWLFKHRWGKGKQNRSQKLPNGDKIVFITV 280 Query: 277 AGRSTFYCTYCQK 289 GR++ QK Sbjct: 281 GGRTSAVVPSVQK 293 >gi|284920492|emb|CBG33554.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli 042] Length = 263 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQL-----EPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLSAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|289428678|ref|ZP_06430361.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|295130990|ref|YP_003581653.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|289158076|gb|EFD06296.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes J165] gi|291377097|gb|ADE00952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes SK137] gi|313773587|gb|EFS39553.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313811638|gb|EFS49352.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313822218|gb|EFS59932.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823549|gb|EFS61263.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313831379|gb|EFS69093.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834991|gb|EFS72705.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|314924612|gb|EFS88443.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314962024|gb|EFT06125.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314974254|gb|EFT18350.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976741|gb|EFT20836.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314978881|gb|EFT22975.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314984442|gb|EFT28534.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|314986460|gb|EFT30552.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990819|gb|EFT34910.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315081315|gb|EFT53291.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315083516|gb|EFT55492.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087197|gb|EFT59173.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089370|gb|EFT61346.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|315095394|gb|EFT67370.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|327328344|gb|EGE70106.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327329790|gb|EGE71546.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|327444128|gb|EGE90782.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444992|gb|EGE91646.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327446475|gb|EGE93129.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] gi|328752231|gb|EGF65847.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|328760096|gb|EGF73675.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] gi|332675869|gb|AEE72685.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 256 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|218704031|ref|YP_002411550.1| endonuclease VIII [Escherichia coli UMN026] gi|293403958|ref|ZP_06647952.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298379734|ref|ZP_06989339.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300900708|ref|ZP_07118857.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] gi|226741114|sp|B7N9V3|END8_ECOLU RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218431128|emb|CAR12004.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli UMN026] gi|291428544|gb|EFF01569.1| endonuclease VIII [Escherichia coli FVEC1412] gi|298279432|gb|EFI20940.1| endonuclease VIII [Escherichia coli FVEC1302] gi|300355767|gb|EFJ71637.1| zinc finger found in FPG and IleRS [Escherichia coli MS 198-1] Length = 263 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLSAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|85710813|ref|ZP_01041874.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] gi|85695217|gb|EAQ33154.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] Length = 197 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 17/214 (7%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSG + + +H+H+ I T + NDPRRFG + ET+ + Sbjct: 1 MSGKLRVVPIETPR----VKHDHIEIEFTTGQCLR-----LNDPRRFGALLFTETNAD-E 50 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + L LGPEP + FNA YL + K +K +++ V G+GNIY EAL++A + Sbjct: 51 HKLLAMLGPEPLTDEFNADYLFERSRNKKQPIKTFIMDNHQVVGVGNIYANEALFKAGIH 110 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R ++ K +L++ I++ L +AI GG++LRD+ +DGS GYF V Sbjct: 111 PKRAAGAIS------KVRYERLVKHIKETLAEAIRQGGTTLRDFTRVDGSPGYFAQKLQV 164 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ G+ C+ C + +R I RST YCT CQ+ Sbjct: 165 YGRGGKMCM-VCKKPLREIRLGQRSTVYCTQCQR 197 >gi|326499279|dbj|BAK06130.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 375 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 118/300 (39%), Gaps = 36/300 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEAARLALEEHCVGKRILRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L + L+ GM+G+ I+ +K +++ + + L + Sbjct: 61 NLWLVLDSPPYPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + D RRF + L++ PP+ LGP+ F +KN+ +K+ Sbjct: 118 --LEFSFTDKRRFAKIRLLDNPE--AVPPISELGPDALCEPMQLDEFVQSFGRKNAPIKS 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L++A++ P++ + + K+ L + I++V+ ++ Sbjct: 174 LLLDQSFMSGIGNWMADEVLYQARIHPMQTSSKIS------KEKCKALHRCIKEVIEKSV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + G S F + + + +P + G+ I + GR++ Y Q Sbjct: 228 EVGADSN-----------EFPENWIFHSREKKPGKAFVDGKKIDFVTVGGRTSAYVPELQ 276 >gi|284988837|ref|YP_003407391.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] gi|284062082|gb|ADB73020.1| DNA-formamidopyrimidine glycosylase [Geodermatophilus obscurus DSM 43160] Length = 284 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L VT + L F SA G ++ V+R K+L Sbjct: 1 MPELPEVEALTAFLREHAVGSVVTRVDLAAVQAIKTFDPPLSA-LGGLELTGVARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 +++ L ++VHL +G P K + V + L + + + Sbjct: 60 DLDVS-GLHLVVHLARAGWLHWRTGLPTAPPKPGKGPLAVRVHLEDGDG---FDLTEQGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + +V + + P + LGP+ + + ++ LK AL +Q ++AG Sbjct: 116 RKGLAVYVVRSPAE--VPGIARLGPDAL--AVDRDTFVALLAGRSGQLKGALTDQTLLAG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP + L + +L ++ L +A+ Sbjct: 172 IGNAYSDEILHAARLSPFKMADKLSDDEAL------RLYDAMRATLTEALQRQVG----- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 221 QEAATMKGEKRSGLQVHARTGLPC-PVCGDTVREVSFADTSLQYCPTCQ 268 >gi|226361374|ref|YP_002779152.1| DNA glycosylase [Rhodococcus opacus B4] gi|226239859|dbj|BAH50207.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 288 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAEFLRKHAVGAVVGRVDVAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ L ++ HL G KP K P V T T + + Sbjct: 60 ALDCS-GLWLVTHLSRGGWLRWTDNPSVAPPKPGKGPLALRVHF-FTPEGATPAFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + LV + + + LGP+ + ++ +KNAL++Q ++ Sbjct: 118 GTKKRLAVWLVHDPREVE--GIARLGPDAL--AVTEPEFAALLSTTSARIKNALVDQSLL 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP +R+L P+D ++ L ++ VL DA++ Sbjct: 174 AGVGNAYSDEILHTAKISPFATSRTL------PEDQVHVLYDAMRSVLTDAVERSLG--- 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 225 --QDAARLKGEKRSGMRVHARTGLPC-PVCGDTVREVSFAEKSFQYCATCQ 272 >gi|159040486|ref|YP_001539739.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] gi|157919321|gb|ABW00749.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora arenicola CNS-205] Length = 286 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + + + +AA G+++ D R K+L Sbjct: 1 MPELPEVEALADYLRRRAVGRRVDRLEIAAISALKTYDPAITAA-AGRQVTDARRLGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L+ +L +++HL +G ++ P V + + + + + + + Sbjct: 60 DLVLDADLHLVIHLARAGWLQFREEFPSRGPLRPGKGPVALRVRLDDGS-GFDLTEAGTQ 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + LGP+ + + + + +K L +Q ++AG+ Sbjct: 119 KSLAIYLVTDPAV--VPGVARLGPDAL--AVDPATFAERLRGRRGQVKGVLTDQTVLAGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP T L D L L + VL +A+ S Sbjct: 175 GNAYSDEILHTARLSPFALTSRLTD------DQLAALHTATRDVLGEAV-----SRSVGQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 224 RAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQYCPACQ 270 >gi|313825875|gb|EFS63589.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] Length = 256 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL + L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWLILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|317123306|ref|YP_004097418.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] gi|315587394|gb|ADU46691.1| DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase [Intrasporangium calvum DSM 43043] Length = 286 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 24/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + VT + L + F + G I V R K+L Sbjct: 1 MPELPEVQALVDFLAERTAGLAVTKVELASISALKTFNPP-PQSLEGAPIDGVHRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 I+ + ++ HL +G T+ +P K+P V +S + + + Sbjct: 60 DIDCD-GTHLVFHLARAGWLRWSDQLPTTVLRPGKSPIALRVRLS-----DGSGFDLTEA 113 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ +V + P + LGP+P + F + + +K L +Q+++ Sbjct: 114 GTKKSLAAYIVRDPKE--VPGVARLGPDPLADDFTLERFRELLTGRRTQIKGLLRDQEVI 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP SL P D++ +L +++ L A+ A Sbjct: 172 AGVGNAYSDEILHVAKVSPFAIAGSL------PPDVVDRLYAALRETLSSAVHAASGKPA 225 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+ +TG+ C CG ++R + A S YC CQ Sbjct: 226 KELKDAKRAG-----MRVHARTGQAC-PECGDVVREVSFADTSLQYCATCQ 270 >gi|302538173|ref|ZP_07290515.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302447068|gb|EFL18884.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 286 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +R L + V + L L+ P AA G+ V+R K+ Sbjct: 1 MPELPEVEALREFLDEHLAGRVVERVLPLAVSVLKTYDPPP--AALEGQPAGPVARYGKF 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYND 118 L + + G L ++ HL +G A+P + + + + L + + Sbjct: 59 LALRV-GGLHLVTHLARAGWLRWREEFPAQPPRPGKGPLALRLVLEGGGG---FDLTEAG 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ + +V + P + LGP+P + F + +K L +Q ++A Sbjct: 115 TQKRLAVYVVHDPQE--VPGIARLGPDPLADGFGREAFAALLAGERRQIKGVLRDQSVIA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN Y E L AK+SP + S + T L ++ L +A++ Sbjct: 173 GIGNAYSDEILHAAKVSPFKLAASFDEEQVT------HLYGAVRDTLREAVERAHGLAAQ 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GEPC CG +R + A S YC CQ Sbjct: 227 DLKAEKKSG-----LRVHGRDGEPC-PVCGDTVRSVSFADSSLQYCPTCQ 270 >gi|323967463|gb|EGB62882.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli M863] gi|327254388|gb|EGE66010.1| endonuclease VIII [Escherichia coli STEC_7v] Length = 263 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEAAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI ++ + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRLS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|312200446|ref|YP_004020507.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311231782|gb|ADP84637.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 270 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + G+ + K+LL+ Sbjct: 1 MPEGHTVHRLAAAHAEMFRGRPVAVTSPQGRF---ADGARRLTGRVLESAEAYGKHLLLR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ G + + P V + L ++ Y D R Sbjct: 58 FDGEQVLHVHLGIYGKYTLAPGPAPTPTGA-----VRLRLASDGG-------YADLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+E L LGP+P ++ + + + + L++Q +VAG GNI Sbjct: 106 ACELLEPGDVKT--LLDRLGPDPLRPDADSELAWRRISRSRTVIAQLLMDQAVVAGPGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA + P + L + L ++ ++ + + G H Sbjct: 164 YRAEVLFRAGIDPRLSGKDLAASQ------WAALWADLGVLMAEGVRTGRIDTVRPQHTP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY +TG+PCL C + AGR+ F+C CQ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRTGQPCL-ICENPVLTTELAGRNLFWCPVCQ 267 >gi|313819676|gb|EFS57390.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] Length = 256 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH-----RKNLRFDFPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + R F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPRGGLAGAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LL+Q Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLDQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|313807891|gb|EFS46372.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA2] Length = 256 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 22/268 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-----FPHHFSAATRGKKIIDVSR 55 M ELPEVE +R L + + V + + F G++ V+R Sbjct: 1 MLELPEVETVRAGLEQFVVPVVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 R KYL L+ +++ HLGMSG F + PQH H I +T + + Sbjct: 61 RGKYLWFILDDGTAMLAHLGMSGQFRVS------TQHAPQHRHTRIVITLDDG---RDLR 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 + D R FG + L + P+ + P+P + F+ + + + S +K +LLNQ Sbjct: 112 FLDQRTFGGLTLAPL-VDGIPGPVTHIAPDPFEECFDVDEVVRRLCARRSAIKRSLLNQT 170 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V+GIGNIY E LWR + P L Q+ +L+Q V+ +A+ GG+S Sbjct: 171 LVSGIGNIYADETLWRVRCHPETPCSRLSQSEAV------ELLQTACDVMAEAMSQGGTS 224 Query: 236 LRD-YVHIDGSIGYFQNAFSVYGKTGEP 262 YV+++G G+F YG+ EP Sbjct: 225 FDSLYVNVNGESGWFSRVLDAYGREDEP 252 >gi|256023684|ref|ZP_05437549.1| endonuclease VIII [Escherichia sp. 4_1_40B] Length = 263 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNCQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|323357079|ref|YP_004223475.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273450|dbj|BAJ73595.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 287 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 21/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEVE + L + + V+ + N + +A G + V R K++ Sbjct: 1 MPEMPEVEGLVEFLRGRVTGLQVSKATVSAINALKTYDPPLTA-LVGSAVTAVDRHGKFV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 + + + +I HL +G + IK + + + + + + + Sbjct: 60 DVSTDAGVHLIFHLAKAGWLRWYDALPSTIIKPGKTPIALRVGFDDGSG---FDLTEAGT 116 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + V + + P + LGP+P F+ + + +K L +Q I+AG Sbjct: 117 KKSLAVYAVRSPDE--VPGIARLGPDPLSEGFDRATFGALLTGRRTQIKGVLRDQSIIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID-AGGSSLRD 238 +GN Y E L AK+SP +L D + +L + + + L +AID A G + Sbjct: 175 VGNAYSDEILHAAKMSPYALAATLTD------DEVDRLFRAMVETLTEAIDEARGKPPAE 228 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+ GE C CG +R + A S YC CQ Sbjct: 229 LKDA------KRRGMRVHGRRGEAC-PVCGDEVRSVYFADNSLEYCPTCQ 271 >gi|111019239|ref|YP_702211.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110818769|gb|ABG94053.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 288 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F + +G+ + +R K+L Sbjct: 1 MPELPEVEALAEFLREHAVGAVVGRVDVAALSVLKTFDPPIT-GLQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ L ++ HL G KP K P V T T + + Sbjct: 60 ALDCS-GLWLVTHLSRGGWLRWTDNPSAAPPKPGKGPLALRVHF-FTPEGATPAFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + + + LGP+ + ++ +KNAL++Q ++ Sbjct: 118 GTKKRLAVWVVHDPQEVE--GIARLGPDAL--AVTEPEFAALLSTTSARIKNALVDQSLL 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN Y E L AK+SP +R+L P+D ++ L ++ VL DA+ Sbjct: 174 AGVGNAYSDEILHTAKISPFATSRTL------PEDQVHVLYDAMRSVLSDAVQRSLG--- 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR + A +S YC CQ Sbjct: 225 --QDAARLKGEKRSGMRVHARTGLPC-PVCGDTIREVSFAEKSFQYCATCQ 272 >gi|302531490|ref|ZP_07283832.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302440385|gb|EFL12201.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L TV + + ++ ++ G++I +R K+L Sbjct: 1 MPELPEVEALAHHLREHAVGSTVFRLDVASLSVLKTAMPPYTE-LHGREITGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G+L ++VHL +G P+K + + + + + + Sbjct: 60 DVVL-GDLHLVVHLARAGWLRWSDALSPAPLKPGKGPISLRVHLESASGPGFDLTEAGTK 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V + + LGP+ + +A L F K + LK AL +Q ++AGI Sbjct: 119 KGLAVWIVADPAE--VASVARLGPDAL--AVDASQLRELFQGKGTRLKWALTDQSLIAGI 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + RAKLSP L + L L + I++V DA+ S Sbjct: 175 GNAYSDEIMHRAKLSPYATVGKLDEG------ALEVLAEAIREVETDAV-----SRSVGQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG IR I A +S YC CQ Sbjct: 224 KAARLKGEKRSGLRVHARTGLPC-PVCGDTIREISFADKSFQYCATCQ 270 >gi|16128689|ref|NP_415242.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|89107572|ref|AP_001352.1| endonuclease VIII [Escherichia coli str. K-12 substr. W3110] gi|170080381|ref|YP_001729701.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238899979|ref|YP_002925775.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|300947207|ref|ZP_07161417.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|300957658|ref|ZP_07169849.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|301027113|ref|ZP_07190483.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|301647439|ref|ZP_07247246.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|307137325|ref|ZP_07496681.1| endonuclease VIII [Escherichia coli H736] gi|331641215|ref|ZP_08342350.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] gi|1706651|sp|P50465|END8_ECOLI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741113|sp|B1X6P5|END8_ECODH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|259645858|sp|C4ZWI9|END8_ECOBW RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|1054938|gb|AAC45355.1| endonuclease VIII [Escherichia coli] gi|1786932|gb|AAC73808.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. MG1655] gi|2190281|dbj|BAA20414.1| endonuclease VIII [Escherichia coli] gi|4062310|dbj|BAA35378.1| endonuclease VIII [Escherichia coli str. K12 substr. W3110] gi|169888216|gb|ACB01923.1| endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli str. K-12 substr. DH10B] gi|238861032|gb|ACR63030.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BW2952] gi|260450133|gb|ACX40555.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli DH1] gi|299879402|gb|EFI87613.1| zinc finger found in FPG and IleRS [Escherichia coli MS 196-1] gi|300315619|gb|EFJ65403.1| zinc finger found in FPG and IleRS [Escherichia coli MS 175-1] gi|300453193|gb|EFK16813.1| zinc finger found in FPG and IleRS [Escherichia coli MS 116-1] gi|301074413|gb|EFK89219.1| zinc finger protein found in FPG and IleRS [Escherichia coli MS 146-1] gi|315135370|dbj|BAJ42529.1| endonuclease VIII [Escherichia coli DH1] gi|315614659|gb|EFU95300.1| endonuclease VIII [Escherichia coli 3431] gi|323942975|gb|EGB39138.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E482] gi|323971999|gb|EGB67219.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TA007] gi|331038013|gb|EGI10233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H736] Length = 263 Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|256393641|ref|YP_003115205.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] gi|256359867|gb|ACU73364.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] Length = 288 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 18/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + V + SA G+ + V+R K+L Sbjct: 1 MPELPEVQALAAFLDEHLAGHAVAAATPVAIQALKTYDPPLSA-LEGQVVSGVTRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 + G++ +++HL +G + P + + + + + + Y Sbjct: 60 DFSV-GDVHLVLHLARAGWVRWQEELPTAPPRPGKGPLALRVRMEEPAGSGIDVTEYGTK 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + + + P + LG +P F A L + +K L +Q ++AG Sbjct: 119 KGLAVYVVRDPA---EVPGIARLGIDPLSAEFTAEVLAGLLDGERRQIKGFLRDQSVLAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + L D + L Q I L DA++ Sbjct: 176 IGNAYSDEILHAARMSPYKLAAKLTP------DEVADLYQVIIGTLTDAVERSRGLPMKD 229 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+TGE C CG IR + A + YC CQ Sbjct: 230 LKSEKKSG-----LRVHGRTGEKC-PVCGDTIREVSFADSALQYCPTCQ 272 >gi|282163419|ref|YP_003355804.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] gi|282155733|dbj|BAI60821.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] Length = 269 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + +K T+ +I + ++ + FS GKKI V+ + K++ Sbjct: 1 MPELPEIYNLAGQMDEALKGKTIREIQIRQEKCLNMPANEFSTLVVGKKIRQVTPKGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++LE + ++ LGM G+ + P K ++LT + N++ + Sbjct: 61 FMKLEPDGYFLLSLGMGGNLLYHRPGDNIPEK------YQVALTFDDNSRLSIGFWWFGY 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 DL ++ LG P D +F K ++K ALL+Q +AGI Sbjct: 115 AHAVKDL------KEHKMTHKLGVSPVDPAFTLEKFYGMLEGKKGSVKTALLDQSFIAGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y + L+ AKL P RK +L + L + I+ L +AI GG + Sbjct: 169 GNVYAQDILFNAKLHPDRKIPTLTEGER------RALFEAIRHDLDEAIALGGIAPE--K 220 Query: 241 HIDGSIGYFQ-NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G G + F + G+PC CG I +I +++ C CQ+ Sbjct: 221 DLYGKPGRLTIDDFKAGYREGKPC-PVCGTTIEKIKTGSTASYICPKCQR 269 >gi|254383482|ref|ZP_04998833.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] gi|194342378|gb|EDX23344.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] Length = 286 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +R L + V + ++ + +A G+ +R K+L Sbjct: 1 MPELPEVEALREFLDEHLTGRVVERVHPLAVSVLKTYEPPLTA-LEGQPAGTTARHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 + + G L ++ HL +G + + +P + + + + L + + Sbjct: 60 ALRI-GELHLVTHLARAGWLRWQDSFPEQPPRPGKGPLALRLVLEGGGG---FDLTEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + +V + P + LGP+P ++F+ + +K L +Q ++AG Sbjct: 116 QKRLAVYVVRDPQE--VPGIARLGPDPLADAFDRDAFAALLAGERRQIKGVLRDQGVIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L RAK+SP + S + T L +Q L +A+ Sbjct: 174 IGNAYSDEILHRAKVSPFKLAASFDEEQVT------HLYGAVQDTLREAVARSHGVAAGR 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +A V+G+ GEPC CG +R + A S YC CQ Sbjct: 228 LKAEKK-----SAMRVHGREGEPC-PVCGDTVRSVSFADSSLQYCPTCQ 270 >gi|50953934|ref|YP_061222.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950416|gb|AAT88117.1| formamidopyrimidine-DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 287 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 111/289 (38%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + +L + + + + F A I VSR K+L Sbjct: 1 MPELPEVTALAADLEKRLSGHVIDRLSVVAFAALKTFDPS-PDALHNATITSVSRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G L +I+HL +G P P + L + R Sbjct: 60 DIA-AGELHLIIHLARAGWIGWCQGPPPAPTGWPSKGPLAARLVLEDG-SGLDITEAGTR 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + +V + P + LGP+P D +F + +K L NQ ++AG Sbjct: 118 KSLSISVVRDPAE--VPGVARLGPDPLDPAFTRDVFAAILAGQGRAQIKGVLRNQGLIAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP + D L +L +Q L +A+ + D Sbjct: 176 IGNAYSDEILHVAKMSPFKPA-------ALTDDELDRLYTAVQSTLREAL-----TRADG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ V+G+TG PC CG +R ++ A + YC CQ Sbjct: 224 LAASELKSEKKSGLRVHGRTGRPC-PICGDTVREVIFADSTLQYCPTCQ 271 >gi|330470731|ref|YP_004408474.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] gi|328813702|gb|AEB47874.1| DNA-formamidopyrimidine glycosylase [Verrucosispora maris AB-18-032] Length = 286 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + + +A G+ + D R K+L Sbjct: 1 MPELPEVEALAGYLRQRAVGRRVERLEAVAISALKTYDPALTA-VTGRSVTDARRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G+L ++VHL +G + P + + + + + + + Sbjct: 60 DVVFDGDLHLVVHLARAGWLHYREAFASTVPLRPGKGPIALRARLDDGS-GFDLTEAGTQ 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + LGP+ S + + LK L +Q ++AG+ Sbjct: 119 KKLAVYLVTDPQ--AVPGVAKLGPDAL--SADLAAFAGALRSRRGQLKGVLTDQAVLAGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AKLSP T L D + L ++VL DA+ + Sbjct: 175 GNAYSDEILHAAKLSPFALTDRLTD------DQMATLHAATRRVLGDAV-----TRSLGQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 224 RAAELKGEKRSGLKVHARTGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|323976316|gb|EGB71406.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli TW10509] Length = 263 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI ++ + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRLS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|206603467|gb|EDZ39947.1| Formamidopyrimidine-DNA glycosylase [Leptospirillum sp. Group II '5-way CG'] Length = 291 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 26/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E IR ++ + V I + + + + V R K L Sbjct: 1 MPELPEAEAIRLPVIRFFSDGIVESIKRGNNKKIWIGENEY--RLEELFLFTVRRTGKVL 58 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + + + + +I LGMSG+++I+H P H H+ IS ++ + R++ Sbjct: 59 IFDWRITKEKPAVLLISRLGMSGTWLIQHLRDPL----PDHCHLVISFKDSAH----RLV 110 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG ++ + L + GP+ A + + + +++ LL+QK Sbjct: 111 YRDPRRFGRLEW--AFEEECSVILASQGPDILKIP--ADDWYREARRSSRTIRSLLLDQK 166 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 I +GIGNIY E L+ A LSP R +SL + Y+++ +++L AI +GGS+ Sbjct: 167 ISSGIGNIYASEILFAAGLSPFRTGKSLSKRES------YRILDAARQILESAIRSGGST 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G G +Q+ +VYG+ G+PCL C I+ + +A R+ FYC CQK Sbjct: 221 IHSFQTSLGENGRYQDRHTVYGRAGKPCL-QCSTPIQSVREASRTLFYCPVCQK 273 >gi|157160194|ref|YP_001457512.1| endonuclease VIII [Escherichia coli HS] gi|170020941|ref|YP_001725895.1| endonuclease VIII [Escherichia coli ATCC 8739] gi|188492106|ref|ZP_02999376.1| endonuclease VIII [Escherichia coli 53638] gi|194439240|ref|ZP_03071320.1| endonuclease VIII [Escherichia coli 101-1] gi|253774316|ref|YP_003037147.1| endonuclease VIII [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160784|ref|YP_003043892.1| endonuclease VIII [Escherichia coli B str. REL606] gi|300929484|ref|ZP_07144952.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|166920090|sp|A7ZXX5|END8_ECOHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|189037132|sp|B1IY15|END8_ECOLC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157065874|gb|ABV05129.1| endonuclease VIII [Escherichia coli HS] gi|169755869|gb|ACA78568.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli ATCC 8739] gi|188487305|gb|EDU62408.1| endonuclease VIII [Escherichia coli 53638] gi|194421825|gb|EDX37832.1| endonuclease VIII [Escherichia coli 101-1] gi|242376476|emb|CAQ31180.1| endonuclease VIII [Escherichia coli BL21(DE3)] gi|253325360|gb|ACT29962.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972685|gb|ACT38356.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli B str. REL606] gi|253976879|gb|ACT42549.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli BL21(DE3)] gi|300462593|gb|EFK26086.1| zinc finger found in FPG and IleRS [Escherichia coli MS 187-1] gi|309700936|emb|CBJ00233.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) [Escherichia coli ETEC H10407] gi|323938292|gb|EGB34549.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1520] gi|323963094|gb|EGB58664.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H489] Length = 263 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|54026994|ref|YP_121236.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54018502|dbj|BAD59872.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 289 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 120/293 (40%), Gaps = 25/293 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + + L V + + FD P A G+ + +R K Sbjct: 1 MPELPEVEALAQFLREHAVGAVVGRVDVAALSAVKTFDPP---VTALSGRDVSGAARWGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS---LTNNTNTKKYRVI 115 +L ++ L +I HL G P K + + + T T + + Sbjct: 58 FLGMDCS-GLWLITHLSRGGWLRWIDEPNPNPPKPGGKSPLALRVHFFTPEGATPAFDLT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++ + +V+ P + LGP+ + + H + LK AL++Q Sbjct: 117 EAGTKKRLAVYVVDDPKL--VPGIARLGPDALE--VSEPQFAELLHGTSQRLKTALVDQA 172 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AGIGN Y E L AK+SP T++L P + + +L ++ VL DA+ Sbjct: 173 LLAGIGNAYSDEILHTAKISPFANTKTL------PAEKIAELYAAMRAVLTDAVQRSVG- 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG+PC CG +R + A RS YC CQ Sbjct: 226 ----QDAARLKGEKRSGMRVHARTGQPC-PVCGDTVREVSYAERSFQYCPTCQ 273 >gi|255553261|ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 403 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE R+ + + + D P F AA GK +I R+ K Sbjct: 1 MPELPEVEAARKAIEENCLGKKIKKAIIASDAKVIDGVSPSDFEAALVGKTLISAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L ++L+ GM+G+ I+ + K +++ + + L + Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+ PP+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLNNP--VSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKA 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L++A++ P + S K+ L++ I++V+ AI Sbjct: 174 LLLDQSFISGIGNWIADEVLYQARIHPQQSASSFT------KESCATLLKCIKEVIEKAI 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ F N++ + + +P + G+ I I GR+T Y Q Sbjct: 228 E-----------VEADSSQFPNSWIFHSREKKPGKAFIDGKKIDFITSGGRTTAYVPELQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|289807172|ref|ZP_06537801.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 165 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 9/174 (5%) Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y DPRRFG + T + L LGPEP + FN YL + KK + +K L++ K Sbjct: 1 YTDPRRFGA--WLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNK 58 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +V G+GNIY E+L+ A + P R SL D+L ++I+ VL+ +I+ GG++ Sbjct: 59 LVVGVGNIYASESLFAAGIHPDRLASSLSTEEC---DLLARVIKA---VLLRSIEQGGTT 112 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +CQK Sbjct: 113 LKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHCQK 165 >gi|297625311|ref|YP_003687074.1| formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921076|emb|CBL55617.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 287 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 115/291 (39%), Gaps = 23/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELP+VE + L + + + + FD P A G+ + ++R K Sbjct: 1 MPELPQVEALADFLRTDLVGSVIERLEVGAISALKTFDPPPD---ALVGRTVTAINRFGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L ++ G L ++ HL +G + + IK + + + + + + + Sbjct: 58 HLDVD-AGGLHLVFHLARAGWLVWREKVPSTVIKPGK-SRIALRVRLQGG-AGFDLTEAG 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 +R + +V Q P + +LGP+P F LK L +Q ++ Sbjct: 115 TQRKLAVWIVRDPQ--QVPSIASLGPDPMAPGFTPAVFRQILAGAGRAQLKGILRDQHVI 172 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AKLSP + +L D + +L I+ L A + Sbjct: 173 AGIGNAYSDEILHDAKLSPFKPAANLTD------DEVERLYAAIRDGLAAATERARGLAA 226 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D + ++G G+PC CG I + A S YC CQ Sbjct: 227 RDIKADK-----RAQLRIHGHAGDPC-PVCGTPIASVNFADSSLQYCPVCQ 271 >gi|238486134|ref|XP_002374305.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] gi|220699184|gb|EED55523.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus flavus NRRL3357] Length = 369 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + ++ PL+ GP+P ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L D + +L + V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTD------DQVKELHSALHYVCSI 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + F+ +S K P L N G I + GR++ Sbjct: 235 SVDLLADSEKFPEDWL-----FKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|169771323|ref|XP_001820131.1| formamidopyrimidine-DNA glycosylase [Aspergillus oryzae RIB40] gi|83767990|dbj|BAE58129.1| unnamed protein product [Aspergillus oryzae] Length = 369 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + ++ + F A GKKI+ ++ Sbjct: 1 MPELAEVSRIVHFIRQHLVGKTLAKVSTQNDDIVYGKAGTSASEFQKAMEGKKIVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I + KP L K Sbjct: 61 GKYFWIAMASPPHVVMHFGMAGWLKIRNADTYYYRTDKPQDKEWPPKYWKFLLETDEDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + ++ PL+ GP+P ++ +L + K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPAEQIRKFSPLKENGPDPVADKDTVTEDWLASKLRSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ A++ P + + +L D + +L + V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHARIHPEQYSNTLTD------DQVKELHSALHYVCSI 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + F+ +S K P L N G I + GR++ Sbjct: 235 SVDLLADSEKFPEDWL-----FKYRWSKGKKNASPTLPN-GDKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|303272279|ref|XP_003055501.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463475|gb|EEH60753.1| predicted protein [Micromonas pusilla CCMP1545] Length = 330 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 37/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR------KNLRFDFPHHFSAATRGKKIIDVS 54 MPELPEVE R + T+ + + K + F++A +G+ + Sbjct: 1 MPELPEVESARVLCEKHIVGATIVSVEFNEDGTYDEKIFKEIDESQFTSALKGRTVKAAR 60 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV----TISLTNNTNTK 110 R K+L +L + + H GM+G+ I+ K + V + T + Sbjct: 61 RLGKHLWWDLGTRSTPLFHFGMTGAMTIKGGGSIVKYKAFAVDTVNWPPRFAKLVVTFSN 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + Y DPRRFG + LV+ + + PPL LG +P + F K+ + +K Sbjct: 121 GVTLAYTDPRRFGRVRLVD-GVVTESPPLSDLGFDPLLAMPDEKTFASLFAKRAAPVKAV 179 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+QK+ AG+GN E L+ A++ P + +SL L + + V+ A + Sbjct: 180 LLDQKVAAGVGNWVADEVLFHARVHPEQPAKSLTHGQ------LAMVRDAMSMVVTVACE 233 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 AG S + F + + + G+ + GR+T + QK Sbjct: 234 AGAISEK-----------FPEDWLFHHRWGK---------VTGNKVGGRTTAFVPSVQK 272 >gi|116670100|ref|YP_831033.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Arthrobacter sp. FB24] gi|116610209|gb|ABK02933.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24] Length = 316 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 28/298 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI-CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV + L ++ +T I + L+ P + A G+ I V RR K+ Sbjct: 21 MPELPEVAGLGAFLGDRLRGAVLTKIQIVSFAVLKTADPPY--TALEGRTISGVQRRGKF 78 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ--------HNHVTISLTNNTNTKK 111 ++I+ + + + HL +G + + + + + Sbjct: 79 IIIDAD-GIYLAFHLAKAGWLRYTESPSNALLPRGKGYIAARFEFSRIRPDADGGEAHLG 137 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + ++ + +V P + +LGP+P SF + +K L Sbjct: 138 IDLTEAGTKKSLALYVVRDPE--DIPGIASLGPDPLSASFTLDAFAEILSSSSQQIKGLL 195 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK-DILYKLIQEIQKVLIDAID 230 NQ ++AGIGN Y E L A++SP +SL + D ++ ++ + Sbjct: 196 RNQGVIAGIGNAYSDEILHAARISPFATAKSLDPESVRVLYDSVHNILGAAVA------E 249 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 A G + + ++ V+G+TG+ C CG +R + A R+ YC CQ Sbjct: 250 AVGKAPNELKDA------KRSTMRVHGRTGQAC-PVCGDTVREVSFADRALQYCPRCQ 300 >gi|84495570|ref|ZP_00994689.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84385063|gb|EAQ00943.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 286 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L ++ VT + L ++ F A G I VSR K+L Sbjct: 1 MPELPEVQALVDFLSTRTADLAVTGVELGSISVLKTFNPP-PEALVGAPIDSVSRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G ++ HL +G + ++ + + + L++ + + + Sbjct: 60 DLDC-GGTHLVFHLARAGWLRWSDALSSTRLRPGKSPIALRVRLSDGSG---FDLTEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ +V S P + LGP+P ++F+ +N+ LK L +Q I+AG Sbjct: 116 KKSLAAYIV--SSPSDVPGIARLGPDPLSDAFSLKVFREILGGRNAQLKGVLRDQSIIAG 173 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L AKLSP L + + L + + A + L+D Sbjct: 174 VGNAYSDEILHVAKLSPFAMAAKLDDEQT--ERLYAALRDTLSAAVGAATGKPAAELKD- 230 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+TGE C CG ++R + A S YC CQ Sbjct: 231 --------AKRQGMRVHGRTGETC-PECGDVVREVSFADSSLQYCATCQ 270 >gi|323191061|gb|EFZ76326.1| endonuclease VIII [Escherichia coli RN587/1] Length = 263 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDTPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|323163870|gb|EFZ49680.1| endonuclease VIII [Shigella sonnei 53G] Length = 263 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|238061799|ref|ZP_04606508.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237883610|gb|EEP72438.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 286 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + V + + + + AA G+ + D R K+L Sbjct: 1 MPELPEVEALAGYLRERAVSRRVDRVEVAAISALKTY-DPAPAAVSGRAVTDARRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G+L ++VHL +G + + P + + + + + + + + Sbjct: 60 DVVFDGDLHLVVHLARAGWLHYRESFPSAAPLRPGKGPIALRVRLDDGS-GFDLTEAGTQ 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + LV + P + LGP+ + + + + +K L++Q ++AG+ Sbjct: 119 KKLAAYLV--ADPATVPGVAKLGPDVL--AADLPTFAARIRSRRGQVKGVLMDQAVLAGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP T L D + L + ++VL DA+ S Sbjct: 175 GNAYSDEILHAARLSPFALTDRLTD------DQVAALHESTRRVLGDAL-----SRSLGH 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ +V+ + G PC CG +R + A S YC CQ Sbjct: 224 RAAELKGEKRSGLAVHARAGLPC-PTCGDTVREVSFADSSLQYCPTCQ 270 >gi|296122878|ref|YP_003630656.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] gi|296015218|gb|ADG68457.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] Length = 301 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 28/302 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR----FDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE + R + ++ + + + R G+ I V R Sbjct: 1 MPELPEVETMVRGVRSALERHRLVALRILDTAYRSLTILPDERTVCERVAGQVIQRVWRL 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT------- 109 K ++++ ++ + M+G ++E A+ H + L + Sbjct: 61 GKRVVLDFSDGSTLTIEPRMTGLMLLEDPPSAE------HLRLEFRLAPAGSHGSPTKGK 114 Query: 110 -KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 K V + D R G + + +GP+ S A K + +K Sbjct: 115 GKSTSVWFWDRRGLGTVTWRPPGELEKLLSSHQIGPDAL--SLAAEGWKAALGKTSRPVK 172 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 A+L+QK+VAG+GN+Y E L RA +SP+ + L +L +++L A Sbjct: 173 VAMLDQKLVAGVGNLYASEILHRAGISPLSASSQLHPEE------WERLANAARQILELA 226 Query: 229 IDAGGSSLRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 I GS+L D Y + G +QN VY K GE C + +I RIVQA RSTFYC + Sbjct: 227 IQYEGSTLSDGTYRNALNKSGGYQNEHLVYAKAGEVCSTCRSGVILRIVQAQRSTFYCEH 286 Query: 287 CQ 288 CQ Sbjct: 287 CQ 288 >gi|292487647|ref|YP_003530520.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] gi|292898884|ref|YP_003538253.1| endonuclease VIII [Erwinia amylovora ATCC 49946] gi|291198732|emb|CBJ45841.1| endonuclease VIII (DNA N-glycosylase/AP lyase) [Erwinia amylovora ATCC 49946] gi|291553067|emb|CBA20112.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora CFBP1430] Length = 264 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L +K +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVWFA-----FPALQTYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ A+P ++ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSG-AEPAESKRVLRVRLAAADQT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A L+ K +L + + +D Sbjct: 166 AGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKVDEN----- 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 221 ---HHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|312171755|emb|CBX80013.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia amylovora ATCC BAA-2158] Length = 264 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L +K +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRVADRLEEAIKGKVLTDVWFA-----FPALQTYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ A+P ++ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSG-AEPAQSKRVLRVRLAAADQT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDVQGLAAHPFLQRTGPDVLDMALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A L+ K +L + + +D Sbjct: 166 AGLGNYLRVEILWQAGLAAQHKAETLSDQQLDALATALLAVPRLSYRTRGKVDEN----- 220 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H G++ +F V+ + G+ C CG +I + V + R ++C CQK Sbjct: 221 ---HHHGAL----FSFKVFHRAGKRC-ERCGDIIVKTVLSSRPFYWCPGCQK 264 >gi|26246683|ref|NP_752723.1| endonuclease VIII [Escherichia coli CFT073] gi|110640924|ref|YP_668652.1| endonuclease VIII [Escherichia coli 536] gi|191174054|ref|ZP_03035570.1| endonuclease VIII [Escherichia coli F11] gi|227884317|ref|ZP_04002122.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300989874|ref|ZP_07179003.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|300996474|ref|ZP_07181448.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|301046040|ref|ZP_07193220.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|331656734|ref|ZP_08357696.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] gi|57012700|sp|Q8FJU5|END8_ECOL6 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|122958487|sp|Q0TJX8|END8_ECOL5 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|26107082|gb|AAN79266.1|AE016757_170 Endonuclease VIII [Escherichia coli CFT073] gi|110342516|gb|ABG68753.1| endonuclease VIII [Escherichia coli 536] gi|190905662|gb|EDV65285.1| endonuclease VIII [Escherichia coli F11] gi|222032454|emb|CAP75193.1| endonuclease VIII [Escherichia coli LF82] gi|227838403|gb|EEJ48869.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli 83972] gi|300301957|gb|EFJ58342.1| zinc finger found in FPG and IleRS [Escherichia coli MS 185-1] gi|300304528|gb|EFJ59048.1| zinc finger found in FPG and IleRS [Escherichia coli MS 200-1] gi|300407277|gb|EFJ90815.1| zinc finger found in FPG and IleRS [Escherichia coli MS 45-1] gi|307552567|gb|ADN45342.1| endonuclease VIII [Escherichia coli ABU 83972] gi|312945242|gb|ADR26069.1| endonuclease VIII [Escherichia coli O83:H1 str. NRG 857C] gi|315292029|gb|EFU51381.1| zinc finger found in FPG and IleRS [Escherichia coli MS 153-1] gi|315299245|gb|EFU58499.1| zinc finger found in FPG and IleRS [Escherichia coli MS 16-3] gi|324010437|gb|EGB79656.1| zinc finger found in FPG and IleRS [Escherichia coli MS 60-1] gi|331054982|gb|EGI26991.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA206] Length = 263 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|91209750|ref|YP_539736.1| endonuclease VIII [Escherichia coli UTI89] gi|117622911|ref|YP_851824.1| endonuclease VIII [Escherichia coli APEC O1] gi|218557634|ref|YP_002390547.1| endonuclease VIII [Escherichia coli S88] gi|218688511|ref|YP_002396723.1| endonuclease VIII [Escherichia coli ED1a] gi|237707322|ref|ZP_04537803.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|306812874|ref|ZP_07447067.1| endonuclease VIII [Escherichia coli NC101] gi|122424567|sp|Q1REK9|END8_ECOUT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|166920091|sp|A1A8X0|END8_ECOK1 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741110|sp|B7MFX3|END8_ECO45 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783122|sp|B7MPL0|END8_ECO81 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|91071324|gb|ABE06205.1| endonuclease VIII [Escherichia coli UTI89] gi|115512035|gb|ABJ00110.1| endonuclease VIII [Escherichia coli APEC O1] gi|218364403|emb|CAR02082.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli S88] gi|218426075|emb|CAR06892.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli ED1a] gi|226898532|gb|EEH84791.1| endonuclease VIII [Escherichia sp. 3_2_53FAA] gi|294491202|gb|ADE89958.1| endonuclease VIII [Escherichia coli IHE3034] gi|305853637|gb|EFM54076.1| endonuclease VIII [Escherichia coli NC101] gi|307627868|gb|ADN72172.1| endonuclease VIII [Escherichia coli UM146] gi|315287170|gb|EFU46582.1| zinc finger found in FPG and IleRS [Escherichia coli MS 110-3] gi|320194126|gb|EFW68758.1| Endonuclease VIII [Escherichia coli WV_060327] gi|323952724|gb|EGB48592.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H252] gi|323958461|gb|EGB54167.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H263] gi|324006240|gb|EGB75459.1| zinc finger found in FPG and IleRS [Escherichia coli MS 57-2] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDTPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|284106932|ref|ZP_06386312.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] gi|283830005|gb|EFC34282.1| Formamidopyrimidine-DNA glycosylase [Candidatus Poribacteria sp. WGA-A3] Length = 275 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE E++RR + + T+ I + R ++ S G ++++V R K + Sbjct: 1 MPELPEAEVVRRQVQAAVVGSTIDRIWIGRDDIIRQGLESLSWY-AGARVVEVQRHGKSV 59 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ E G ++ LGM+G + S + + +H H+ + L N + V Y Sbjct: 60 VLICERDAGRRVVVAELGMTGLLLFARES----VPSEKHVHMIMRLANG---PQPEVWYW 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + RRFG + L++ + Y R G +P + + +K LLNQ + Sbjct: 113 NARRFGRLYLLDQTAWQAYRQ-RRFGCDPF--TMTEVEFVDVIKSCRGRIKAVLLNQHRI 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGNIY E L+R+ + P + L + + L +Q+VL +AI GGSS+R Sbjct: 170 AGIGNIYANEVLFRSGIHPHARGCRLSRRR------IRVLFDTMQRVLEEAIRLGGSSVR 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D+V DG+ G FQ+ VY K G C + CG I+ RS+F C CQK Sbjct: 224 DFVAPDGTRGQFQDRHVVYQKKGAHCPNGCGTRIQCF-MNERSSFVCPACQK 274 >gi|74311239|ref|YP_309658.1| endonuclease VIII [Shigella sonnei Ss046] gi|123617735|sp|Q3Z489|END8_SHISS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|73854716|gb|AAZ87423.1| endonuclease VIII/DNA N-glycosylase with an AP lyase activity [Shigella sonnei Ss046] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GLVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|197251492|ref|YP_002145687.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226741118|sp|B5EZF2|END8_SALA4 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197215195|gb|ACH52592.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 113/293 (38%), Gaps = 34/293 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV-TISLTNNTNTKKYRVIYNDP 119 L L++ H + G + + T + P+ + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTG-----EIPKTTRILRVRLQTAD---KTILLYSAS 107 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKI 176 ++++ +P L+ +GP+ D + + +N LL+Q Sbjct: 108 D----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAF 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN E LW+ L+ K + L N + + L+ I + Sbjct: 164 LAGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTT 212 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 213 RGQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|161504121|ref|YP_001571233.1| endonuclease VIII [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189037133|sp|A9MJM8|END8_SALAR RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|160865468|gb|ABX22091.1| hypothetical protein SARI_02219 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 111/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADHLEAAIKGKLLTDVWFAFAQLK-----PYESQLTGQMVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T H T L T ++ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIP--------HTTRILRVRLQTADKTILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 108 D---IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+++L+ K + L + L L + + + G + Sbjct: 165 AGLGNYLRVEILWQSELTGQHKAKDLSEAQ------LNTLSHALLDIPRLSYATRGQTDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H Q F V+ + GE C CG +I + + R ++C +CQK Sbjct: 219 NKHHGA------QFRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 363 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 114/302 (37%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F A GKK++ ++ Sbjct: 1 MPELAEVFRIVHFIRQHLVGKTLTKVSAQEDPIIYGKVGTSAAEFQKAMEGKKVVGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + ++H GM+G I KP L K Sbjct: 61 GKYFWIAMSSPPHPVMHFGMAGWLKIRDADTYYYRTDKPEDKEWPPKYWKFLLETDGEPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR G + LV+ + PL+ GP+P + +L ++ K + Sbjct: 121 TEAAFVDFRRLGRIRLVDCPADDIRNHTPLKENGPDPVVDKDIVTETWLANKLRSKKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L D + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLND------DQIKELNSAIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ +S GK G I I GR++ Sbjct: 235 SVDLLADSEKFPEHWL-----FKHRWS-KGKKNVASALPNGDKITFITVGGRTSAVVPNV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|302870627|ref|YP_003839264.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|302573486|gb|ADL49688.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] Length = 286 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 108/290 (37%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V + +D P +A G+ + R K Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPP---SAVAGRAVTGAGRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + L ++VHL +G A P + + + + + + Sbjct: 58 FLDVRFDEGLHLVVHLARAGWLHYREAFPATTPLRPGKGPIAVRVRLDDG-SGFDLTEAG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ LV Q P + LGP+ + + + + +K L +Q ++A Sbjct: 117 TQKKLAAYLVTDPA--QVPGVAKLGPDALE--ADLPTFAERLRSRRGQVKGVLTDQSVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L A+LSP T L D L L + VL DA+ Sbjct: 173 GVGNAYSDEILHAARLSPFAITDRLTD------DQLAGLHAATRTVLGDAVRRSMG---- 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG +R + A S YC CQ Sbjct: 223 -QRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|315506864|ref|YP_004085751.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|315413483|gb|ADU11600.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 286 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 108/290 (37%), Gaps = 22/290 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD--ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L V + +D P +A G+ + R K Sbjct: 1 MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPP---SAVAGRAVTGAGRYGK 57 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + L ++VHL +G A P + + + + + + Sbjct: 58 FLDVRFDEGLHLVVHLARAGWLHYREAFPAATPLRPGKGPIAVRVRLDDG-SGFDLTEAG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++ LV Q P + LGP+ + + + + +K L +Q ++A Sbjct: 117 TQKKLAAYLVTDPA--QVPGVAKLGPDALE--ADLPTFAERLRSRRGQVKGVLTDQSVLA 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN Y E L A+LSP T L D L L + VL DA+ Sbjct: 173 GVGNAYSDEILHAARLSPFAITDRLTD------DQLAGLHAATRTVLGDAVRRSMG---- 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ + G PC CG +R + A S YC CQ Sbjct: 223 -QRAAELKGEKRSGLKVHARKGLPC-PVCGDTVREVSFADSSLQYCPTCQ 270 >gi|56414155|ref|YP_151230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363077|ref|YP_002142714.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821335|sp|Q5PCL7|END8_SALPA RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741124|sp|B5BC82|END8_SALPK RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|56128412|gb|AAV77918.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094554|emb|CAR60074.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 263 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ I + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIITRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|168238871|ref|ZP_02663929.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734233|ref|YP_002113835.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226741125|sp|B4TQ44|END8_SALSV RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194709735|gb|ACF88956.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288348|gb|EDY27729.1| endonuclease VIII (dna glycosylase/ap lyase nei) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 263 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTADQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|301345445|ref|ZP_07226186.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595026|ref|ZP_07240034.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 202 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 19/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGSF + C + +H+H+ I + ++ Y+DPRRFG + + + Q Sbjct: 1 MSGSFRL----CQPNDELRKHDHLIIQFEDQ------QLRYHDPRRFGCILWLNP--ETQ 48 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 + TLGPEP + F+A YL + K+ +K AL++ +V G+GNIY E+L+ + Sbjct: 49 GKLIDTLGPEPLNTDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH 108 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + L + KL+ EI+++L AID GGS+LRDY + G GYFQ Sbjct: 109 PAQPAGDLTLQQ------IEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLA 162 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+ GE C+ NC + + R++ +C CQ Sbjct: 163 YGRAGEMCV-NCETTLENLKLGQRASVFCPQCQ 194 >gi|281177852|dbj|BAI54182.1| endonuclease VIII [Escherichia coli SE15] Length = 263 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 113/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I ++ + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAPQLDALAHALLDIPRLS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|301020828|ref|ZP_07184892.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] gi|300398474|gb|EFJ82012.1| zinc finger found in FPG and IleRS [Escherichia coli MS 69-1] Length = 263 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ RK + L + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNRKAKDLSAAQLDAL-----------ADALLDIPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|170683193|ref|YP_001742818.1| endonuclease VIII [Escherichia coli SMS-3-5] gi|226741116|sp|B1LLF1|END8_ECOSM RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|170520911|gb|ACB19089.1| endonuclease VIII [Escherichia coli SMS-3-5] Length = 263 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|322615838|gb|EFY12756.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621234|gb|EFY18091.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623654|gb|EFY20492.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628926|gb|EFY25706.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634906|gb|EFY31636.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636566|gb|EFY33270.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641775|gb|EFY38408.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647807|gb|EFY44287.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651863|gb|EFY48232.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652640|gb|EFY48989.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658448|gb|EFY54711.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664949|gb|EFY61140.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668381|gb|EFY64537.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670531|gb|EFY66664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675271|gb|EFY71347.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679697|gb|EFY75738.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684827|gb|EFY80826.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193145|gb|EFZ78364.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200596|gb|EFZ85671.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202268|gb|EFZ87316.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205465|gb|EFZ90431.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213496|gb|EFZ98289.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215330|gb|EGA00075.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220916|gb|EGA05350.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228075|gb|EGA12211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231019|gb|EGA15135.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234148|gb|EGA18237.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238157|gb|EGA22215.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243592|gb|EGA27610.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247384|gb|EGA31343.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251372|gb|EGA35244.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258489|gb|EGA42161.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260643|gb|EGA44252.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264715|gb|EGA48217.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272238|gb|EGA55650.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 263 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQIVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|119500164|ref|XP_001266839.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] gi|119415004|gb|EAW24942.1| Formamidopyrimidine-DNA glycosylase, putative [Neosartorya fischeri NRRL 181] Length = 367 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFIDQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKEWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPAEEIRKHSPLKDNGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I V Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYVCTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHWL-----FKHRWG-KGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|331694040|ref|YP_004330279.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326948729|gb|AEA22426.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 291 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 21/292 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + ++L V + + ++ F ++A G+ + SR K+L Sbjct: 1 MPELPEVEALAQHLRDHAVYRPVARVDVASMSVLKTFEPP-ASALVGRVVTGASRYGKFL 59 Query: 61 LIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +E L++I HL +G T+ A P K + + + + Sbjct: 60 SVEFHDRPGDELALITHLSRAGWLRWHATASATPPKPGRGPLALRVHLDTVGGPGFDLTE 119 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + LV + P + LGP+ + + L +K +++QK Sbjct: 120 AGTQKRLAVYLVHDPQE--VPGIAKLGPDAL--ALSRDELAELLAGHTERIKTLIVDQKT 175 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E L A+LSP + L L L + ++ VL DA++ Sbjct: 176 IAGIGNAYSDEILHTARLSPYAVSGRLRPEQ------LDALYEAMRTVLTDAVERSVG-- 227 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A RS YC CQ Sbjct: 228 ---QGAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFAERSFQYCPGCQ 275 >gi|331645866|ref|ZP_08346969.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] gi|330910465|gb|EGH38975.1| endonuclease V3 [Escherichia coli AA86] gi|331044618|gb|EGI16745.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M605] Length = 263 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 113/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWHVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I ++ + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAPQLDALAHALLDIPRLS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|326773635|ref|ZP_08232918.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326636865|gb|EGE37768.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 358 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 128/358 (35%), Gaps = 77/358 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEH---------------------TSCAKPIKNPQ- 95 K+L + L+ ++ HLGMSG ++ P P Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTAATAPDAAPESHRAAAFLADPDTLPGGRPAD 120 Query: 96 ------------------HNHVTISLTNNTNTKKYR----------VIYNDPRRFGFMDL 127 H V + L+ + D R G + + Sbjct: 121 LSATEQPRYVRDISTSAHHLRVRLHLSTGLGGDNGADGDDGAGAAVLDLVDQRMLGGLHV 180 Query: 128 VETSLKYQYPPLRTLGPEPA---------DNSFNAIY-------LTHQFHKKNSNLKNAL 171 V+ + P P P + + + + +K L Sbjct: 181 VDLTPTADGAPGGMGDPRPLLPADATHIARDLLDPALELTGPTGVVARVRASRRAIKTQL 240 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +V+GIGNIY E LW A + +R L ++ ++++ +V+ A++ Sbjct: 241 LDQGLVSGIGNIYADEGLWEAGVHGLRPGTGLGPR------VVARILESTAEVMRRALEV 294 Query: 232 GGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG+S YV ++G+ G+F YG+ G C C + R GRS YC CQ Sbjct: 295 GGTSFDALYVDVEGAAGFFARELGAYGRQGLEC-RRCKATMVRETLGGRSHTYCPRCQ 351 >gi|238911659|ref|ZP_04655496.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 263 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|159125439|gb|EDP50556.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus A1163] Length = 367 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHWL-----FKHRWG-KGKKNKPPVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|295096574|emb|CBK85664.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease VIII [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 263 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T + L+ F + G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTHVWFAFPQLK-----PFESQLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + + PQ V L T ++ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVEAD-----EQPQTTRV---LRVRLQTADKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK---KNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 108 D---IEMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPTFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+P K L L L + + + + R Sbjct: 165 AGLGNYLRVEILWEVGLAPQHKASQLSDEQ------LEALSHALLDIPRLSYN-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 214 GVVDENKHHGAL-FRFKVFHRAGKKC-ERCGGVIEKATISSRPFYWCPGCQ 262 >gi|169835968|ref|ZP_02869156.1| formamidopyrimidine-DNA glycosylase [candidate division TM7 single-cell isolate TM7a] Length = 227 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 22/236 (9%) Query: 62 IELEGNLSIIVHLGMSGSFIIEHT---SCAKPIK------NPQHNHVTISLTNNTNTKKY 112 I+L N ++++HL M+G I P + V+ + + Sbjct: 2 IDLSTNYTLVIHLKMTGQIIYRGDIKFGAGHPNDSLIGELPDKSTRVSFDFEDGS----- 56 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNAL 171 ++ +ND R+FG++ L+ + P ++ +GPEP D+ F H+F +KN+++K AL Sbjct: 57 KLFFNDQRKFGWIKLIPSLEVKNLPFMQKVGPEPLDDDFTVEDFIHRFERRKNTSIKAAL 116 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q +VAG+GNIY E+LW AK+ P R+ + + + L E++ V+ +I Sbjct: 117 LDQTVVAGVGNIYADESLWGAKIDPRRRVKDITNDEFKS------LYNEVRYVMDLSIKK 170 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 GGS+ R+YV +G+ G + V+ + G+ C CG +I +I AGR T C C Sbjct: 171 GGSTDRNYVDAEGNKGSYLEFARVFRREGQAC-KRCGHIIEKIKHAGRGTHICPGC 225 >gi|116075002|ref|ZP_01472262.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] gi|116067199|gb|EAU72953.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9916] Length = 200 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 18/216 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F+ + + +H V + + + + D R FG M V + Sbjct: 1 MTGQFLWLDDAT----EPCRHTRVRF-----WDPEGRELRFIDMRSFGEMWWVPPGDPLE 51 Query: 136 --YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 L+ LGPEP + FN YL + ++K ALL+Q +VAG GNIY E+L+ A Sbjct: 52 SVITGLKKLGPEPFSDDFNGGYLKQRLKNSKRSIKAALLDQSLVAGAGNIYADESLFAAG 111 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 ++P L L +L + VL +I AGG++ D+ ++G G + Sbjct: 112 IAPHTAAGQLKLAQ------LNELCACLVDVLQKSIGAGGTTFSDFRDLEGVNGNYGGQA 165 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 SVY +TG PCL+ CG I R AGRST +C CQ+ Sbjct: 166 SVYRRTGSPCLA-CGTPIVRDKLAGRSTHWCPNCQR 200 >gi|119714424|ref|YP_921389.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] gi|119535085|gb|ABL79702.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Nocardioides sp. JS614] Length = 288 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 119/291 (40%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L + + I + + F SA G + DV+R K+L Sbjct: 1 MPELPEVEALALDLRGRLDGHAIAKIHVAAFSALKTFDPPLSA-LEGTLVDDVTRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN--HVTISLTNNTNTKKYRVIYND 118 IE L +++HL +G P K + V I L + + V Sbjct: 60 DIE-ASGLHLVLHLARAGWVRWRDEVPTIPPKPSTKSTLAVRIVLDDQSGLD---VTEAG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIV 177 R+ M +V + P + +LGP+P + F L + LK L +Q + Sbjct: 116 TRKSLAMYVVRDP--HDVPGIASLGPDPLTDEFTIDRLREILEREGRKQLKGVLRHQGTI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L A++SP + +L D L L ++ L DA+ Sbjct: 174 AGIGNAYSDEILHAARMSPFKAAGTLTD------DELQVLYDALRGTLGDAVGR-----S 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ +V+G+ G+ C CG +R + A S YC CQ Sbjct: 223 RGLAASELKGEKKSHLAVHGRAGQAC-PVCGDTVREVSFADSSLQYCPTCQ 272 >gi|70993580|ref|XP_751637.1| formamidopyrimidine-DNA glycosylase [Aspergillus fumigatus Af293] gi|66849271|gb|EAL89599.1| formamidopyrimidine-DNA glycosylase, putative [Aspergillus fumigatus Af293] Length = 367 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + ++ + F A GKK++ ++ Sbjct: 1 MPELAEVSRIVHFINQHLVGKTLTKVSAQNDDIVYGKVGTSASEFQKAMEGKKVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY + + ++H GM+G I KP L K Sbjct: 61 GKYFWLIMNEPPHAVMHFGMAGWLKIRDADTYYYRVEKPEDKTWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR + LV+ + ++ PL+ GP+P + +L + + + Sbjct: 121 TEAAFVDFRRLSRIRLVDCPGEEIRKHSPLKENGPDPVADKDIVTEEWLADKLKSRKVPI 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L+ AK+ P + + +L + +L I + Sbjct: 181 KALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDEQ------IKQLHSSIHYICTT 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 ++D S + H F++ + GK +P + G+ I + GR++ Sbjct: 235 SVDVLADSEKFPEHWL-----FKHRWG-KGKKNKPSVLPNGEKIVFLTVGGRTSAVVPSV 288 Query: 288 QK 289 Q+ Sbjct: 289 QR 290 >gi|283479110|emb|CAY75026.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia pyrifoliae DSM 12163] Length = 264 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ +P ++ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGV-EPAQSKRVLRVRLAAADKT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILWQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQA-- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKACQ-RCGETIVKTMLSSRPFYWCPGCQK 264 >gi|331662067|ref|ZP_08362990.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] gi|331060489|gb|EGI32453.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA143] Length = 263 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVETG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLSAAQLDAL-----------ADALLDIPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|205351992|ref|YP_002225793.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856172|ref|YP_002242823.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|226741120|sp|B5QWF8|END8_SALEP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741121|sp|B5R679|END8_SALG2 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|205271773|emb|CAR36607.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707975|emb|CAR32264.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627032|gb|EGE33375.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 263 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQSDENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|168230606|ref|ZP_02655664.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240579|ref|ZP_02665511.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264331|ref|ZP_02686304.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467716|ref|ZP_02701553.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194450919|ref|YP_002044759.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468700|ref|ZP_03074684.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|226741122|sp|B4TBC8|END8_SALHS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194409223|gb|ACF69442.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455064|gb|EDX43903.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195629189|gb|EDX48557.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205334680|gb|EDZ21444.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339977|gb|EDZ26741.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347178|gb|EDZ33809.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 263 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|240276344|gb|EER39856.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H143] gi|325089797|gb|EGC43107.1| formamidopyrimidine-DNA glycosylase lyase mutM [Ajellomyces capsulatus H88] Length = 383 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 121/313 (38%), Gaps = 44/313 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICSNLVGKTITKVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + +P+ P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEEPVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFH 161 ++N + DPRRFG + LV+ ++ PL+ GP+P D +L + Sbjct: 121 SSN---SEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLT 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ P+ + +L I Sbjct: 178 SKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTI------PEAQIEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-----CGQMIRRIVQ 276 + ++D G S + F + + G+ + G I I Sbjct: 232 NYICSMSVDLLGDSEK-----------FPADWLFKHRWGKGKQNRSQNLPNGDKIVFITV 280 Query: 277 AGRSTFYCTYCQK 289 GR++ QK Sbjct: 281 GGRTSAVVPSVQK 293 >gi|300906969|ref|ZP_07124639.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|301305199|ref|ZP_07211297.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|300401272|gb|EFJ84810.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 84-1] gi|300839511|gb|EFK67271.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 124-1] gi|315257630|gb|EFU37598.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 85-1] Length = 263 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|327295530|ref|XP_003232460.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] gi|326465632|gb|EGD91085.1| formamidopyrimidine-DNA glycosylase [Trichophyton rubrum CBS 118892] Length = 387 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 116/308 (37%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVSRIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S F + ++ GK G G+ I + GR++ Sbjct: 232 NYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGAAGKLPSGEPIVFVTVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|255326609|ref|ZP_05367686.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] gi|255296349|gb|EET75689.1| DNA-formamidopyrimidine glycosylase [Rothia mucilaginosa ATCC 25296] Length = 294 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 119/307 (38%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + V + + R+ +A G I K+L Sbjct: 1 MPEGHSIHRIARQISDVFTG---ERVQVSSPQGRY---AEGAALLDGHTITGAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + E +L++ VHLG+ G++ + I ++ K Sbjct: 55 FVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYAAGEGEPYAGPPEPK 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPL------RTLGPEPADNSFNAIYLTHQFHKKNS 165 V G+ DLV ++ P LGP+P + + K + Sbjct: 115 STVRCRIVSEHGWADLVGPTICRTLTPEEVRTVRSKLGPDPLNPDADPEQFYRAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R +SL L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKSLSDEE------LERLWEDNKHLL 228 Query: 226 IDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + + G + D I + + +A VY GEPC CG IR AGR + Sbjct: 229 VIGVRVGRIITTEPEDRPGIPETEAWPDHANYVYMHHGEPC-RRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|204930016|ref|ZP_03221037.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321010|gb|EDZ06211.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 263 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQITTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|200389798|ref|ZP_03216409.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602243|gb|EDZ00789.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 263 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIGTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|157146685|ref|YP_001454004.1| endonuclease VIII [Citrobacter koseri ATCC BAA-895] gi|166920088|sp|A8AJA5|END8_CITK8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157083890|gb|ABV13568.1| hypothetical protein CKO_02451 [Citrobacter koseri ATCC BAA-895] Length = 263 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 107/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFSQLK-----PYESPLIGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T P V L N T ++ Sbjct: 56 LTHFSQGLTLYSHNQLYGVWRVVETG-----NIPATTRV---LRVNLQTADKTILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 108 D---IEMLTPEQLATHPFLQRVGPDVLDPRLTPSDVKARLLSARFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLSDQQ------LEALSHALLDIPRLS-----YTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C +CQ Sbjct: 214 GQADENTHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQ 262 >gi|151337011|gb|ABS00947.1| MutM [Thermus aquaticus] Length = 200 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 83/222 (37%), Positives = 112/222 (50%), Gaps = 24/222 (10%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 ++VHLGM+G F +E T H L + + ++DPRRFG + +VE Sbjct: 1 MVVHLGMTGGFRLEKTP---------HTRAEFLLEDGV------LHFHDPRRFGRIWVVE 45 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P L LGPEP F + LK LL+Q + AG+GNIY EAL Sbjct: 46 RGAYGEIPLLARLGPEPLSPEFRPEAFLLGLRRSRKPLKALLLDQTLAAGVGNIYADEAL 105 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL--RDYVHIDGSIG 247 +RA LSP R R + + +L Q +++VL +A+ GGS+L R Y DG G Sbjct: 106 FRAGLSPFRLGREVSEEEAL------RLFQALREVLAEAVALGGSTLSDRTYQQPDGLPG 159 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQ +VYG+TG PC CG I + V AGR T YC CQ+ Sbjct: 160 GFQKRHAVYGRTGLPC-PRCGAPIAKGVVAGRGTHYCPRCQR 200 >gi|293413990|ref|ZP_06656639.1| endonuclease VIII [Escherichia coli B185] gi|291434048|gb|EFF07021.1| endonuclease VIII [Escherichia coli B185] Length = 263 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTD-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|168820144|ref|ZP_02832144.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205343055|gb|EDZ29819.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084996|emb|CBY94785.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 263 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 109/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTSEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|161615045|ref|YP_001589010.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037134|sp|A9MTR2|END8_SALPB RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|161364409|gb|ABX68177.1| hypothetical protein SPAB_02805 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 263 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFCNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|218553241|ref|YP_002386154.1| endonuclease VIII [Escherichia coli IAI1] gi|218694137|ref|YP_002401804.1| endonuclease VIII [Escherichia coli 55989] gi|226741112|sp|B7M5M8|END8_ECO8A RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783121|sp|B7LAC0|END8_ECO55 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218350869|emb|CAU96567.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli 55989] gi|218360009|emb|CAQ97556.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI1] gi|324116254|gb|EGC10175.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli E1167] Length = 263 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + TS + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTS-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|315042754|ref|XP_003170753.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] gi|311344542|gb|EFR03745.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma gypseum CBS 118893] Length = 390 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 117/308 (37%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T++ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTISKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S F + ++ GK G G+ I + GR++ Sbjct: 232 NYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGAAGKLPSGEPIVFVTVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|145597000|ref|YP_001161297.1| DNA-(apurinic or apyrimidinic site) lyase [Salinispora tropica CNB-440] gi|145306337|gb|ABP56919.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Salinispora tropica CNB-440] Length = 286 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 18/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + N + +AA G+ ++ R K+L Sbjct: 1 MPELPEVEALTVYLRQRAVGRRVDRLEISAINALKTYDPAITAA-AGQPVVHAQRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L +L ++VHL +G ++ P V + + + + + + Sbjct: 60 DLVLGADLHLVVHLARAGWLHFREEFSSRTPLRPGKGPVALRARLDDGS-GFDLTEAGTQ 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + LV P + LGP+ + + + + +K L +Q ++AG+ Sbjct: 119 KSLAVYLVTDPA--TVPGVARLGPDAL--AVDPATFADRLRSRKGQVKGVLTDQTVLAGV 174 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP T L L L + VL DA+ S Sbjct: 175 GNAYSDEILHTARLSPFALTTRLTDEQ------LATLHAATRDVLGDAV-----SRSVGQ 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A S YC CQ Sbjct: 224 RAAELKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADSSLQYCPGCQ 270 >gi|302523189|ref|ZP_07275531.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302432084|gb|EFL03900.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 278 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 25/282 (8%) Query: 11 RRNLMMVMKNM---TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGN 67 R L + V + ++ P +A G ++ DV R K+L + +G Sbjct: 2 RDFLDDHLVGRIPTRVLPVAVNVLKTYDPPP----SALVGHEVTDVRRYGKFLDVVTDGG 57 Query: 68 LSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 ++ HL +G + P K + + + L + + + + ++ + Sbjct: 58 PHLVTHLARAGWLRWQAKVPDTPPKPGRGPLALRLVLDDGSG---FDLTEAGTQKRLAVY 114 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 +V+ P + LGP+P F+ + LK AL +Q +VAG+GN Y Sbjct: 115 VVDDP--RTVPGIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVAGVGNAYSD 172 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E L AKLSP + L + + +L + ++ L +A+ + + Sbjct: 173 EILHAAKLSPFKNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAGSLKAEKKS 226 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G V+G+TGEPC CG IR + A S YC CQ Sbjct: 227 G-----LRVHGRTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 262 >gi|191167209|ref|ZP_03029028.1| endonuclease VIII [Escherichia coli B7A] gi|193070644|ref|ZP_03051581.1| endonuclease VIII [Escherichia coli E110019] gi|256021212|ref|ZP_05435077.1| endonuclease VIII [Shigella sp. D9] gi|260853949|ref|YP_003227840.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|260866845|ref|YP_003233247.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|309797426|ref|ZP_07691818.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|332282439|ref|ZP_08394852.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] gi|190902757|gb|EDV62487.1| endonuclease VIII [Escherichia coli B7A] gi|192956032|gb|EDV86498.1| endonuclease VIII [Escherichia coli E110019] gi|257752598|dbj|BAI24100.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O26:H11 str. 11368] gi|257763201|dbj|BAI34696.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O111:H- str. 11128] gi|308118950|gb|EFO56212.1| zinc finger found in FPG and IleRS [Escherichia coli MS 145-7] gi|323153773|gb|EFZ40020.1| endonuclease VIII [Escherichia coli EPECa14] gi|323180049|gb|EFZ65605.1| endonuclease VIII [Escherichia coli 1180] gi|332104791|gb|EGJ08137.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Shigella sp. D9] Length = 263 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERVLSPRFRNRQFAGLLLEQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 262 >gi|157155050|ref|YP_001461874.1| endonuclease VIII [Escherichia coli E24377A] gi|193065520|ref|ZP_03046588.1| endonuclease VIII [Escherichia coli E22] gi|194429067|ref|ZP_03061598.1| endonuclease VIII [Escherichia coli B171] gi|209917964|ref|YP_002292048.1| endonuclease VIII [Escherichia coli SE11] gi|260842922|ref|YP_003220700.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|293432982|ref|ZP_06661410.1| endonuclease VIII [Escherichia coli B088] gi|300816361|ref|ZP_07096583.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300822999|ref|ZP_07103134.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300918372|ref|ZP_07134972.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300926116|ref|ZP_07141929.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|301327902|ref|ZP_07221075.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|331667079|ref|ZP_08367944.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331676394|ref|ZP_08377091.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] gi|166920089|sp|A7ZJ95|END8_ECO24 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741115|sp|B6I7Y5|END8_ECOSE RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|157077080|gb|ABV16788.1| endonuclease VIII [Escherichia coli E24377A] gi|192926809|gb|EDV81435.1| endonuclease VIII [Escherichia coli E22] gi|194412898|gb|EDX29189.1| endonuclease VIII [Escherichia coli B171] gi|209911223|dbj|BAG76297.1| endonuclease VIII [Escherichia coli SE11] gi|257758069|dbj|BAI29566.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O103:H2 str. 12009] gi|291323801|gb|EFE63223.1| endonuclease VIII [Escherichia coli B088] gi|300414435|gb|EFJ97745.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 115-1] gi|300417815|gb|EFK01126.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 182-1] gi|300524540|gb|EFK45609.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 119-7] gi|300531051|gb|EFK52113.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 107-1] gi|300845586|gb|EFK73346.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 78-1] gi|320198170|gb|EFW72774.1| Endonuclease VIII [Escherichia coli EC4100B] gi|323158762|gb|EFZ44775.1| endonuclease VIII [Escherichia coli E128010] gi|323170829|gb|EFZ56479.1| endonuclease VIII [Escherichia coli LT-68] gi|323185128|gb|EFZ70494.1| endonuclease VIII [Escherichia coli 1357] gi|323947022|gb|EGB43036.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Escherichia coli H120] gi|324020343|gb|EGB89562.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 117-3] gi|331065435|gb|EGI37328.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli TA271] gi|331075887|gb|EGI47184.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli H591] Length = 263 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|62179304|ref|YP_215721.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582543|ref|YP_002636341.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309746|sp|Q57RM1|END8_SALCH RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|254783123|sp|C0PWD7|END8_SALPC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|62126937|gb|AAX64640.1| endonuclease VIII removing oxidized pyrimidines may also remove oxidized purines in absence of MutY and Fpg [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467070|gb|ACN44900.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713771|gb|EFZ05342.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 263 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 105/292 (35%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLNARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + + I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSHVLL-----------DIPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|167552854|ref|ZP_02346605.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322568|gb|EDZ10407.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 263 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEVC-KRCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|322833850|ref|YP_004213877.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] gi|321169051|gb|ADW74750.1| DNA-(apurinic or apyrimidinic site) lyase [Rahnella sp. Y9602] Length = 264 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 31/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + N +TD+ L+ + +A RG +I + R K L Sbjct: 1 MPEGPEIRRAADVLATAVVNKPLTDVWFAFPALK-----PYQSALRGTRITSIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + + + ++ + T + Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVNAG-----EVEKETKRSLRVKLETTEAAILLYSAS-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + + +T+ ++P L+ +GP+ D + + N L LL+Q + Sbjct: 109 ---EISIYDTAEIEKHPFLQRIGPDVLDERLTVAQVRERLLSPKFCNRQLGGMLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW AKL P K + L L V + G+ Sbjct: 166 AGLGNYLRAEILWLAKLLPDHKPKELNDTERD------ALADACLSVARLSYATRGTMDE 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H G++ F V+G+TG+PC CG I + + R F+C CQ Sbjct: 220 NVHH--GAL----FRFKVFGRTGQPC-ERCGDPIMKTSVSSRPFFWCPVCQ 263 >gi|224134470|ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1| predicted protein [Populus trichocarpa] Length = 307 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 36/301 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + D P F AA GK I+ R+ K Sbjct: 1 MPELPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDGVSPSDFVAALVGKTIVSALRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L ++L+ GM+G+ I+ + K +++ + L + Sbjct: 61 NLWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKFFVQLDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+E PP+ LGP+ L KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLEDPA--SKPPISELGPDALLEPMTVDELHGSLSKKKVAIKA 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q V+GIGN E L++A++ P++ SL + + L + I++V+ A+ Sbjct: 174 LLLDQSFVSGIGNWIADEVLYQARIHPLQIASSLSRESS------ATLHKCIKEVIEKAV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQ 288 + G S + F N + + + + + G+ I IV GR+T Y Q Sbjct: 228 EVGADSSQ-----------FPNNWIFHSREKKSKKTFIDGKEIDFIVAGGRTTAYVPGLQ 276 Query: 289 K 289 K Sbjct: 277 K 277 >gi|24987423|pdb|1K3W|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Dna gi|24987426|pdb|1K3X|A Chain A, Crystal Structure Of A Trapped Reaction Intermediate Of The Dna Repair Enzyme Endonuclease Viii With Brominated-Dna gi|51247247|pdb|1Q39|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The Wt Enzyme At 2.8 Resolution. gi|168988580|pdb|2EA0|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 111/290 (38%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE PE+ NL +K +TD+ L+ + + G+ + V R K LL Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + PQ V + +D Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD--- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATRG 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 QVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|326475689|gb|EGD99698.1| formamidopyrimidine-DNA glycosylase [Trichophyton tonsurans CBS 112818] Length = 388 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 116/308 (37%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S F + ++ GK G G+ I + GR++ Sbjct: 232 NYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGATGKLPSGEPIVFVTVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|242768773|ref|XP_002341637.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] gi|218724833|gb|EED24250.1| formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] Length = 359 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 116/305 (38%), Gaps = 31/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ + ++ + F A +G KI ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGRTLANVQVQNDDIVYGKAGTTAAEFQKAMQGNKITGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTN 108 KY I + +++H GM+G I + P++ L Sbjct: 61 GKYFWITMAKPPHVVMHFGMTGWLKIRNADTYYYRTTNADDKEWPPKYWKF---LLETDE 117 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 T K + DPRR + LV+ +Y PLR GP+P + +L + K Sbjct: 118 TPKTEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKK 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++GIGN E L+ +K+ P + + +L + +L I V Sbjct: 178 VPIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTNEQ------IQQLHNSIDYV 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++ S + F++ + GK + G I + GR++ Sbjct: 232 CTTSVRVLADSEQFPEDWL-----FKHRWG-KGKKNQSSALPNGNKIVFLTVGGRTSAVV 285 Query: 285 TYCQK 289 Q+ Sbjct: 286 PAVQR 290 >gi|296103352|ref|YP_003613498.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057811|gb|ADF62549.1| endonuclease VIII [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +TD+ L+ F A G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTDVWFAFPQLK-----PFEAPLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + +T+ + PQ V L T ++ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVNTN-----EQPQTTRV---LRVRLQTADKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 108 D---IEMLTPEQLLTHPFLQRVGPDVLDMRLTANDVKARLLSPKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ K L D L L + + + + R Sbjct: 165 AGLGNYLRVEILWEVGLAAQHKASQLSD------DQLEVLSHALLDIPRLSYN-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 214 GVVDDNKHHGAL-FRFKVFHRAGKRC-ERCGGVIEKTTLSSRPFYWCPGCQR 263 >gi|194446665|ref|YP_002039966.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226741123|sp|B4SZD3|END8_SALNS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|194405328|gb|ACF65550.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEVC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|326484609|gb|EGE08619.1| formamidopyrimidine-DNA glycosylase [Trichophyton equinum CBS 127.97] Length = 388 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 116/308 (37%), Gaps = 34/308 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK ++ ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVMGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN E L+ A++ P + + +L N + +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQ------IKELHSSI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S F + ++ GK G G+ I + GR++ Sbjct: 232 NYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGATGKLPSGEPIVFVTVGGRTS 285 Query: 282 FYCTYCQK 289 QK Sbjct: 286 AVVPSVQK 293 >gi|198244062|ref|YP_002214697.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|226741119|sp|B5FNF0|END8_SALDC RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|197938578|gb|ACH75911.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622453|gb|EGE28798.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKVRLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQSDENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|320664747|gb|EFX31885.1| endonuclease VIII [Escherichia coli O157:H7 str. LSU-61] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L + D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNEAQ---LDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] Length = 362 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 117/305 (38%), Gaps = 31/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ ++ ++ + F A +G K+I ++ Sbjct: 1 MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTN 108 KY I + +++H GM+G I + P++ L Sbjct: 61 GKYFWITMSKPPHVVMHFGMTGWMKIRNADTYYYRTTNADDKEWPPKYWKF---LLETDE 117 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 K + DPRR + LV+ QY PL+ GP+P + +L + K Sbjct: 118 NPKTEAAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKR 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++GIGN E L+ +K+ P + + +L + +L I V Sbjct: 178 VPIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQ------IKQLHTSIDYV 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 ++ S + F++ + GK +P + G I + GR++ Sbjct: 232 CTTSVGVLADSEQFPEEWL-----FKHRWG-KGKKNQPSVLPNGNKIVFLTVGGRTSAVV 285 Query: 285 TYCQK 289 Q+ Sbjct: 286 PSVQR 290 >gi|307314822|ref|ZP_07594416.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|306905720|gb|EFN36248.1| DNA-(apurinic or apyrimidinic site) lyase [Escherichia coli W] gi|315059956|gb|ADT74283.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli W] gi|323379483|gb|ADX51751.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Escherichia coli KO11] Length = 263 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTD-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ + + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLNPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|312970791|ref|ZP_07784970.1| endonuclease VIII [Escherichia coli 1827-70] gi|310336552|gb|EFQ01719.1| endonuclease VIII [Escherichia coli 1827-70] gi|332342049|gb|AEE55383.1| endonuclease VIII [Escherichia coli UMNK88] Length = 263 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSPLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTVDKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|293409085|ref|ZP_06652661.1| endonuclease VIII [Escherichia coli B354] gi|291469553|gb|EFF12037.1| endonuclease VIII [Escherichia coli B354] Length = 263 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K + D+ L + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLIDVWFAFPQL-----EPYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|82543143|ref|YP_407090.1| endonuclease VIII [Shigella boydii Sb227] gi|187732849|ref|YP_001879368.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|123560282|sp|Q324J6|END8_SHIBS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|226741126|sp|B2TU97|END8_SHIB3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81244554|gb|ABB65262.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella boydii Sb227] gi|187429841|gb|ACD09115.1| endonuclease VIII [Shigella boydii CDC 3083-94] gi|320175361|gb|EFW50465.1| Endonuclease VIII [Shigella dysenteriae CDC 74-1112] gi|320183672|gb|EFW58512.1| Endonuclease VIII [Shigella flexneri CDC 796-83] gi|332097678|gb|EGJ02653.1| endonuclease VIII [Shigella boydii 3594-74] Length = 263 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVGTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|300937827|ref|ZP_07152623.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] gi|300457192|gb|EFK20685.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Escherichia coli MS 21-1] Length = 263 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTVDKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPKLTPEVAKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GRVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|297191673|ref|ZP_06909071.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] gi|197721607|gb|EDY65515.1| DNA glycosylase [Streptomyces pristinaespiralis ATCC 25486] Length = 274 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 38/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P +A G+ ++DV+ R K+L Sbjct: 8 MPEGDTVWLTAHRLHEALAGQVLTRSDLR-------VPRFATADLTGRTVLDVTPRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HLGM GS+ + A+ P H I + YR+ Sbjct: 61 LTRFEGGLTLHSHLGMEGSWRVFDAG-ARWSGGPSHQIRAILGSAARTAVGYRL------ 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ + + L ALL+Q+ +AG Sbjct: 114 --PVVELLRTAEEEE--AVGHLGPDLLGPDWDPGRAVANLLADPLRPLGEALLDQRNLAG 169 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQN-NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y E + A+++P L +L++ ++ G + Sbjct: 170 IGNVYKSELAFLARVTPWLPVGELPPGIPERLVATAQRLLEANKRSFDRRTMTSGRNPS- 228 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G PC CG +R+ Q R T++C CQ Sbjct: 229 ------------QKLYVYGRKGRPC-PRCGTPVRKADQGEAGRERPTYWCPRCQ 269 >gi|15800417|ref|NP_286429.1| endonuclease VIII [Escherichia coli O157:H7 EDL933] gi|15829993|ref|NP_308766.1| endonuclease VIII [Escherichia coli O157:H7 str. Sakai] gi|168763993|ref|ZP_02789000.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217326241|ref|ZP_03442325.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|291281646|ref|YP_003498464.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|21362529|sp|Q8X9C6|END8_ECO57 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|12513625|gb|AAG55037.1|AE005249_8 endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. EDL933] gi|13360197|dbj|BAB34162.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Escherichia coli O157:H7 str. Sakai] gi|189365928|gb|EDU84344.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4501] gi|217322462|gb|EEC30886.1| endonuclease VIII [Escherichia coli O157:H7 str. TW14588] gi|290761519|gb|ADD55480.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli O55:H7 str. CB9615] gi|320193108|gb|EFW67748.1| Endonuclease VIII [Escherichia coli O157:H7 str. EC1212] gi|320643356|gb|EFX12536.1| endonuclease VIII [Escherichia coli O157:H- str. 493-89] gi|320648705|gb|EFX17338.1| endonuclease VIII [Escherichia coli O157:H- str. H 2687] gi|320654289|gb|EFX22342.1| endonuclease VIII [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659922|gb|EFX27464.1| endonuclease VIII [Escherichia coli O55:H7 str. USDA 5905] gi|326341550|gb|EGD65340.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1044] Length = 263 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|218699063|ref|YP_002406692.1| endonuclease VIII [Escherichia coli IAI39] gi|226741111|sp|B7NMR0|END8_ECO7I RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|218369049|emb|CAR16803.1| endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli IAI39] Length = 263 Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNELTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|215485737|ref|YP_002328168.1| endonuclease VIII [Escherichia coli O127:H6 str. E2348/69] gi|312965146|ref|ZP_07779383.1| endonuclease VIII [Escherichia coli 2362-75] gi|254783120|sp|B7ULJ5|END8_ECO27 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|215263809|emb|CAS08145.1| endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Escherichia coli O127:H6 str. E2348/69] gi|312290237|gb|EFR18120.1| endonuclease VIII [Escherichia coli 2362-75] Length = 263 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSRLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +G + D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGHDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDLNAAQ------LDALAHALLDIPRLS-----YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 GQVDENKYHGAL-FRFKVFHRDGEPC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|294629356|ref|ZP_06707916.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] gi|292832689|gb|EFF91038.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. e14] Length = 269 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G ++ K+L + Sbjct: 1 MPEGHTIHRLAQDYAARFQGSRPTVTSPQGKF---SDAAALLTGGELTRTEAHGKHLFLR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L + T Y D R Sbjct: 58 FREADWVHIHLGLFGKVTFGDAPAPPPT-----DTVRLRLADTT-------AYVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ + K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 106 TCALITGAEKQAIHD--RLGPDPLRPDADPATAYARIRRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R + D++ + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRPGRDITPAEWQAMWADLVALMRDGVRANRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY +T PC CG +R A R+ F+C CQ+ Sbjct: 222 RPPRVDDHGGEVYVYRRTALPC-HICGTEVRTADLAARNLFWCPTCQR 268 >gi|118619547|ref|YP_907879.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571657|gb|ABL06408.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 287 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 115/289 (39%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + +L T+ + + ++ F +A G+ + R KYL Sbjct: 1 MPELPEIGALVDHLRRPAVGTTIGRVDVAALSVLKTFDSPINA-LHGQTVTGAGRWGKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDP 119 ++ G L +I HL +G A P+ + + + L + + Sbjct: 60 GVQ-AGPLWLIAHLSRAGWLRWSDKLAAAPLPPGKGPIALRVHLGTLGVAPGFDLTEAGT 118 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ + LVE Q P + TLGP+ + L +K + +QK++AG Sbjct: 119 QKRLAVWLVEDP--RQVPGIATLGPDALE--LGPEELAGVLGPHTGRIKTVMTDQKVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AK+SP L + L L + VL DA+ S Sbjct: 175 IGNAYSDEILHVAKISPFATAAKLSEEQ------LAALHDAVVSVLTDAV-----SRSVG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++ V+ +TG PC CG +R + A +S YC CQ Sbjct: 224 QGAATLKGEKRSGLRVHARTGLPC-PVCGDTVREVSFADKSFQYCATCQ 271 >gi|16759667|ref|NP_455284.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142560|ref|NP_805902.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213053352|ref|ZP_03346230.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213421167|ref|ZP_03354233.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425379|ref|ZP_03358129.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213613308|ref|ZP_03371134.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646614|ref|ZP_03376667.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854151|ref|ZP_03382683.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824383|ref|ZP_06543976.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|21362531|sp|Q8Z8D2|END8_SALTI RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|25289592|pir||AD0590 endonuclease VIII, DNA N-glycosylase with an AP lyase activity STY0771 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501960|emb|CAD05190.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhi] gi|29138191|gb|AAO69762.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 263 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 263 >gi|283457913|ref|YP_003362514.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] gi|283133929|dbj|BAI64694.1| formamidopyrimidine-DNA glycosylase [Rothia mucilaginosa DY-18] Length = 294 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 118/306 (38%), Gaps = 31/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + V + + R+ +A G I K+L Sbjct: 1 MPEGHSIHRIARQISDVFTG---ERVQVSSPQGRYT---EGAALLDGHTITGAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + E +L++ VHLG+ G++ + I ++ K Sbjct: 55 FVTFENDLTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYAAGEEQPYAGPPEPK 114 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPL------RTLGPEPADNSFNAIYLTHQFHKKNS 165 V G+ DLV ++ P LGP+P + + K + Sbjct: 115 STVRCRIVSEHGWADLVGPTICRTLTPEEVRTVRSKLGPDPLNPDADPEQFYRAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R +SL L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKSLSDEE------LERLWEDNKHLL 228 Query: 226 IDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + + G + D + + + +A VY GEPC CG IR AGR + Sbjct: 229 VIGVRVGRIITTEPEDRPGVPETEAWPDHANYVYMHHGEPC-RRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQ 288 +C CQ Sbjct: 288 WCPGCQ 293 >gi|170768967|ref|ZP_02903420.1| endonuclease VIII [Escherichia albertii TW07627] gi|170122039|gb|EDS90970.1| endonuclease VIII [Escherichia albertii TW07627] Length = 263 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKL-----YQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSDGLTLYSHNQLYGVWRVADTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTAHPFLQRVGPDVLDPNLTSEMVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D+L + +I ++ + R Sbjct: 165 AGLGNYLRVEILWQIGLTGRHKAKDL---NAQQLDVLSHALLDIPRLS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + GE C CG I + + + R ++C CQ+ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGEQC-ERCGSTIEKTMLSSRPFYWCPGCQR 263 >gi|325003039|ref|ZP_08124151.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia sp. P1] Length = 292 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L V + + + F +A G+ + SR K+L Sbjct: 1 MPELPEVEALAHHLREHAVYRPVARVDVASMSALKTF-DPAVSALVGRVVTGASRYGKFL 59 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRV 114 ++ +G L ++ HL +G T+ A P K + + + L + + + Sbjct: 60 SVDFADRPDDGELHLVTHLSRAGWLRWHATAGATPPKPGRGPLQLRVHL-DAVGGPGFDL 118 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++ + LV+ P + LGP+ + L LK + +Q Sbjct: 119 TEAGTQKRLAVYLVDDPAL--VPGIAKLGPDALE--LTRPGLDELLDGDTRRLKTLVTDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 VAGIGN Y E L A+LSP L + + + + ++ G + Sbjct: 175 STVAGIGNAYSDEILHTARLSPYATAGRLTTEQRDA--LFEAVHGVLADAVGRSVGQGAA 232 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 L+ G ++ V+ +TG PC CG +R + A RS YC CQ Sbjct: 233 ELK---------GEKRSGLRVHARTGLPC-PVCGDTVREVSFAERSFQYCPTCQ 276 >gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue; AFUA_4G11930) [Aspergillus nidulans FGSC A4] Length = 363 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL E+ I + + T+ + ++ + F A GKK+I ++ Sbjct: 1 MPELAEIYRIVHFIRQHLVGKTLAKVSTQHDDIVYGKVGTSAAEFQKAMEGKKVIGTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTISLTNNTNTKK 111 KY I + +++H GM+G I KP L K Sbjct: 61 GKYFWITMTSPPHVVMHFGMAGWLKIRDADTYYYRTDKPEDKQWPPKYWKFLLETDGDPK 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNL 167 + D RR + LV+ + Y PL+ GP+P + +L + K + Sbjct: 121 VEAAFVDFRRLARIRLVDCPAEEIRNYTPLKENGPDPLVDKDVVTKEWLGSKLSSKKVPV 180 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGN E L+ AK+ P + + +L D + +L I V Sbjct: 181 KALLLDQAVISGIGNWMGDEILYHAKIHPEQYSNTLTD------DQVKELHSSIHYVCST 234 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 + + S + H F++ +S K + L N G+ I + GR++ Sbjct: 235 STEVLADSDKFPEHWL-----FKHRWSKGKKNKQSSLPN-GEKITFLTVGGRTSAVVPSV 288 Query: 288 QK 289 QK Sbjct: 289 QK 290 >gi|226307944|ref|YP_002767904.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226187061|dbj|BAH35165.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 288 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 22/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L V + + ++ F +A +G+ + +R K+L Sbjct: 1 MPELPEVEALAGFLRQHAVGAVVGRVDIAALSVLKTFDPPITA-LQGRDVTGAARFGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN---HVTISLTNNTNTKKYRVIYN 117 ++ + L ++ HL +G P K + V T T + + Sbjct: 60 ALDCD-GLWLVTHLSRAGWMRWLDNPSPTPPKPGKGPLALRVHF-FTPEGLTPAFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + P + LGP+ + ++ +KN++++Q ++ Sbjct: 118 GTKKRLAVWVVNDPQE--VPGIARLGPDAM--AVTEAEFAEILGGTSARIKNSIVDQSLI 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L A+LSP + L + L ++ L DAI+ Sbjct: 174 AGIGNAYSDEILHTARLSPFATSSRLTPEQ------ISTLYAVMRSTLADAIER-----S 222 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G ++ V+ +TG PC CG ++R + A RS YC CQ Sbjct: 223 EGQDAARLKGEKRSGMRVHARTGLPC-PVCGDVVREVSFAERSFQYCATCQ 272 >gi|46128147|ref|XP_388627.1| hypothetical protein FG08451.1 [Gibberella zeae PH-1] Length = 392 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 81/306 (26%), Positives = 121/306 (39%), Gaps = 29/306 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + F AA +GKKI+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIISASATDDKNVFGKVGTSGEEVEAALKGKKIMSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVTISLTN----NT 107 KY I LE +++H GM+G I+ A K +K +H Sbjct: 61 GKYFWIALEKPPHLVMHFGMTGWIHIKDEQTAYTNYYKKMKEGEHEQWPPRFWKFQFKTE 120 Query: 108 NTKKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEPADN--SFNAIYLTHQFHKK 163 + + V + D RRFG + L+ Q+ PL GP+P + F YL + + Sbjct: 121 GSPEVEVAFTDSRRFGRVRLINCPGDEIRQHSPLVENGPDPVVDVDRFTEEYLHSKMRAR 180 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q +++GIGN E L++AKL P + T LYK+I + Sbjct: 181 HVPIKALLLDQTMISGIGNWVADETLYQAKLHPEQYCDQFSDAQIT---TLYKMI---RY 234 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V A+D G S H F + K L N G+ I I GR++ Y Sbjct: 235 VCQTAVDKLGDSDEFPEHWL-----FNYRWGKGSKDAATKLPN-GEKIAFITVGGRTSCY 288 Query: 284 CTYCQK 289 QK Sbjct: 289 APGVQK 294 >gi|261194587|ref|XP_002623698.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239588236|gb|EEQ70879.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis SLH14081] gi|239613483|gb|EEQ90470.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ER-3] gi|327355061|gb|EGE83918.1| formamidopyrimidine-DNA glycosylase [Ajellomyces dermatitidis ATCC 18188] Length = 378 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 119/306 (38%), Gaps = 31/306 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYIRKYLVGNTITKVHVQDDPIVFGKAGTTAAEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF-------IIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 KY I + ++H GM+G T+ A ++ + + Sbjct: 61 GKYFWITMSSPPHPVMHFGMTGWLKFTIMNTHYRRTTAANNEESQWPPKFWKFILQIDDA 120 Query: 110 KKYRVIYNDPRRFGFMDLV--ETSLKYQYPPLRTLGPEP-ADNS-FNAIYLTHQFHKKNS 165 K + DPRR G + LV + ++ PL+ GP+P D +L+ + K Sbjct: 121 SKSETAFVDPRRLGRVRLVNCPGADIRKHSPLKENGPDPILDKHIMTLDWLSRKLASKKV 180 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL+Q ++GIGN E L+ AK+ P + + ++ Q + +L I V Sbjct: 181 PIKALLLDQSNISGIGNWMGDEILYHAKIHPEQYSNTIEQGQ------IEQLHSAISYVC 234 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN--CGQMIRRIVQAGRSTFY 283 ++D G S + F++ ++ K + G I I GR++ Sbjct: 235 STSVDLLGDSEKFPADWL-----FKHRWT---KGKQKHSQRLPNGDKIVFITVGGRTSAV 286 Query: 284 CTYCQK 289 QK Sbjct: 287 VPSVQK 292 >gi|154287302|ref|XP_001544446.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408087|gb|EDN03628.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 383 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 44/313 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+T + + F F GKKI+ ++ Sbjct: 1 MPELAEVARIVHYICTNLVGKTITQVHAQHDPVVFGKAGTSATEFKKHMEGKKIVGSGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY I + ++H GM+G + + + P+ + L + Sbjct: 61 GKYFWIIMSSPPHPVMHFGMTGWLKFTNVNTHYSRTAPSPKNEESVWPPKFWKFRLQLDD 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFH 161 ++N + DPRRFG + LV+ ++ PL+ GP+P D +L + Sbjct: 121 SSN---SEAAFVDPRRFGRVRLVDCPGAEIRKHSPLKENGPDPILDKDIMTLDWLKKKLA 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + ++ P+ + +L I Sbjct: 178 SKKVPMKALLLDQANISGIGNWMGDEILYHAKIHPEQYCNTI------PEAQIEQLHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-----CGQMIRRIVQ 276 V ++D G S + F + + G+ + G I I Sbjct: 232 NYVCSMSVDLLGDSEK-----------FPADWLFKHRWGKGKQNRSQKLPNGDKIVFITV 280 Query: 277 AGRSTFYCTYCQK 289 GR++ QK Sbjct: 281 GGRTSAVVPSVQK 293 >gi|118473590|ref|YP_888944.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118174877|gb|ABK75773.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 268 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + T + + RF +AA G+ + K+L Sbjct: 1 MPEGHTLHRLARLHQRRFGRTAVVVSSPQGRF---ADGAAAVSGQIFKRATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + +HLG+ G+F + P V + + D R Sbjct: 58 YDGGRVVHIHLGLYGAFTEWPVPAELALPLPV-GQVRMRIIGAQYG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P +A + K + L++Q ++AG+GN+ Sbjct: 110 VCELITEPEIVDV--IAKLGPDPLRPDADASLAWKRITKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P L + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYLPGTQLDAAEFD------AMWTDLVALMKVGVRRGKIVVVRPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GEPC CG +R GR+ F+C CQ Sbjct: 222 GAPSYRTGRPRTYVYRRAGEPC-RICGTPVRTAELEGRNLFWCPTCQ 267 >gi|329998798|ref|ZP_08303217.1| endonuclease VIII [Klebsiella sp. MS 92-3] gi|328538553|gb|EGF64659.1| endonuclease VIII [Klebsiella sp. MS 92-3] Length = 263 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLTGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + PQ N V L T ++ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGVE-----PQSNRV---LRVRLQTASKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 108 D---IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + D L + + +I ++ R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ---LDALARALLDIPRLSYR--------TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GLVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|194434000|ref|ZP_03066271.1| endonuclease VIII [Shigella dysenteriae 1012] gi|194417765|gb|EDX33863.1| endonuclease VIII [Shigella dysenteriae 1012] gi|332093762|gb|EGI98816.1| endonuclease VIII [Shigella boydii 5216-82] gi|332096522|gb|EGJ01518.1| endonuclease VIII [Shigella dysenteriae 155-74] Length = 263 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSQLIGQHVTHLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|24112009|ref|NP_706519.1| endonuclease VIII [Shigella flexneri 2a str. 301] gi|30062122|ref|NP_836293.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|110804657|ref|YP_688177.1| endonuclease VIII [Shigella flexneri 5 str. 8401] gi|57012687|sp|Q83LZ7|END8_SHIFL RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|123048356|sp|Q0T6V4|END8_SHIF8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|24050826|gb|AAN42226.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 301] gi|30040367|gb|AAP16099.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 2a str. 2457T] gi|110614205|gb|ABF02872.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella flexneri 5 str. 8401] gi|281599971|gb|ADA72955.1| Endonuclease VIII [Shigella flexneri 2002017] gi|313649649|gb|EFS14073.1| endonuclease VIII [Shigella flexneri 2a str. 2457T] gi|332760924|gb|EGJ91212.1| endonuclease VIII [Shigella flexneri 4343-70] gi|332761228|gb|EGJ91514.1| endonuclease VIII [Shigella flexneri 2747-71] gi|332763970|gb|EGJ94208.1| endonuclease VIII [Shigella flexneri K-671] gi|332768190|gb|EGJ98375.1| endonuclease VIII [Shigella flexneri 2930-71] gi|333007378|gb|EGK26858.1| endonuclease VIII [Shigella flexneri VA-6] gi|333007744|gb|EGK27220.1| endonuclease VIII [Shigella flexneri K-218] gi|333021566|gb|EGK40816.1| endonuclease VIII [Shigella flexneri K-304] Length = 263 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFPNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|288922013|ref|ZP_06416221.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] gi|288346629|gb|EFC80950.1| DNA-formamidopyrimidine glycosylase [Frankia sp. EUN1f] Length = 292 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 121/296 (40%), Gaps = 28/296 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++TV + N F FS G ++ V R K+L Sbjct: 1 MPELPEVEALAAFLRETAADLTVARVEPVAVNALKTFDPPFST-LVGAALVAVQRHGKFL 59 Query: 61 LIEL---EGN-LSIIVHLGMSGSFII---EHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + +G L ++ HL +G + + A+P ++P V T+ + Sbjct: 60 DLVFAAADGERLDLVTHLARAGWLQWKAKQPRTPARPGRSPLALRVVF-----TDGSGFD 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALL 172 + ++ + LV Q + LG +P F L + +K + Sbjct: 115 LTEAGTQKRLAVYLVRDPA--QVDGISRLGVDPLSPEFTRDVLAALLAESGRAQIKGVIT 172 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q +AG+GN Y EALW A+LSP R +L + +L + VL DA DA Sbjct: 173 DQSKIAGVGNAYSDEALWVARLSPFRPAAALTTME------VDQLHAAVTGVLRDAADAA 226 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +G V+G+TG PC C IR + + RS YC CQ Sbjct: 227 RGLAAADLKAEKKLG-----LKVHGQTGLPC-PRCADTIREVSFSDRSLQYCPTCQ 276 >gi|331682145|ref|ZP_08382767.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] gi|331080569|gb|EGI51745.1| endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) [Escherichia coli H299] Length = 263 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----PYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + + T K + Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEEPQ------TMRVLRVKLQTVDKTILLYSASD- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLITHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|237730681|ref|ZP_04561162.1| endonuclease VIII [Citrobacter sp. 30_2] gi|226906220|gb|EEH92138.1| endonuclease VIII [Citrobacter sp. 30_2] Length = 263 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ + L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLTDVWFAFEQLK-----PYQSQLIGQRVTQLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H + G + + T K PQ + V + + T+ K + Sbjct: 56 LTHFSNGQTLYSHNQLYGVWRVVDTG-----KIPQTSRV-LRVRLQTHDKTILLYSASD- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDLRLTPDEVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L D L + +I ++ + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKASQLSDEQ---LDQLANALLDIPRLS--------YTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + + R ++C CQ Sbjct: 214 GLVDENKHHGAL-FRFKVFHRDGETC-ERCGGIIEKTMLSSRPFYWCPGCQ 262 >gi|296129351|ref|YP_003636601.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] gi|296021166|gb|ADG74402.1| DNA-formamidopyrimidine glycosylase [Cellulomonas flavigena DSM 20109] Length = 296 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 26/297 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + + L VT + + + F A RG +++ SR K+L Sbjct: 1 MPELPEVEALAQFLGERAVGRAVTRVEVAAISALKTFRPP-PTALRGGTVLEASRHGKWL 59 Query: 61 LIEL----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVI 115 + + +G L ++ HL +G +P + + + + + + + + Sbjct: 60 DLSVGSLADGTLHVVWHLSRAGWVRWYDALPERPARPGKSPLALRVGFDDGSG---FDLT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 R+ + +V + P + TLG EP ++F L +N +K L +Q Sbjct: 117 EAGTRKRLAVHVV--ADPADVPQIATLGVEPLSDAFTPERLGELLAARNQQVKGLLRDQG 174 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AGIGN Y E L A+ SP TRS + +L I++VL +A+ + Sbjct: 175 TIAGIGNAYSDEILLVARTSPFAPTRSYDEART------RRLHTAIREVLTEAV-----T 223 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+TGEPC + CG + + A S YC CQ Sbjct: 224 TAAGRPAAELKDAKRRGMRVHGRTGEPCPGWDGTPCGDTVHEVSFADSSLQYCPTCQ 280 >gi|147921120|ref|YP_685069.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] gi|56295548|emb|CAH04791.1| formamidopyrimidine-DNA glycosylase [uncultured archaeon] gi|110620465|emb|CAJ35743.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] Length = 269 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 22/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + + ++ T+ DI + ++ F GK+I + R K++ Sbjct: 1 MPELPEIYNLAMQMNKELQGKTIADIEIVQEKCLNVNSAEFRDLLTGKRIGETRSRGKWI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +++++LGM G + K + T + + Sbjct: 61 FTAAGEDRTLLLNLGMGGDVLYHRPGSEPEGK------YKLKFTYTDASALSINFWW--- 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 FG++ +V+ + + LG P + F K +LK LL+QKI+AGI Sbjct: 112 -FGYVHIVKNNELKSHKMTSALGISPIEPEFTFDCFKKLLSGKRCSLKTLLLDQKIIAGI 170 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-RDY 239 GN+Y + L+ A+L P RK R L D + +L + I L +A GG +D Sbjct: 171 GNVYAQDILFTARLHPDRKVRQLSD------DEIERLFKSIIGNLHNAAAHGGLKFEKDL 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +GSI ++F V K G+PC C I +I +++ C CQ Sbjct: 225 YGHNGSI----DSFLVGYKEGQPC-PVCNTTIEKIKTGSTASYICPKCQ 268 >gi|310799523|gb|EFQ34416.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Glomerella graminicola M1.001] Length = 427 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 117/309 (37%), Gaps = 35/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV L + + + F F A +G+K++ V + Sbjct: 1 MPEIAEVARCVHFLRHHLLGKKIAKVSAPDDANVFGKVGTSGPAFEKALKGRKVVSVGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHT------------SCAKPIKNPQHNHVTISLT 104 KY I + ++HLGM+G I+ + + P++ + Sbjct: 61 GKYFWITFDKPPHAVMHLGMTGWIHIKGDKTAYTNYYKKMKAGEADVWPPKYWKFQLETD 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQF 160 +N + DPRRFG + LV+ ++ PL+ GP+P + F YL + Sbjct: 121 DN---PPVAAAFTDPRRFGRIRLVDCPGADIRKHSPLKENGPDPVVDVDVFTEAYLAGKM 177 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q ++GIGN E L++A+L P + S + +L + Sbjct: 178 RTRHVPVKALLLDQSHISGIGNWVADEVLYQARLHPEQYCDSFDVAE------VARLYEA 231 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 ++ V A+D G S N G G G I + GR+ Sbjct: 232 VRYVCQTAVDKLGDSDEFPADW------LFNYRWGKGSKGAASALPNGDKIAFVTVGGRT 285 Query: 281 TFYCTYCQK 289 + Y QK Sbjct: 286 SCYAPARQK 294 >gi|82775980|ref|YP_402327.1| endonuclease VIII [Shigella dysenteriae Sd197] gi|309786373|ref|ZP_07680999.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331651712|ref|ZP_08352731.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] gi|123563198|sp|Q32IL9|END8_SHIDS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|81240128|gb|ABB60838.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Shigella dysenteriae Sd197] gi|308925767|gb|EFP71248.1| endonuclease VIII [Shigella dysenteriae 1617] gi|331049990|gb|EGI22048.1| endonuclease 8 (Endonuclease VIII) (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyaseNei) [Escherichia coli M718] Length = 263 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTMHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|16764098|ref|NP_459713.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993004|ref|ZP_02574099.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262231|ref|ZP_03162305.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|325530041|sp|E1W9M1|END8_SALTS RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|325530042|sp|P0CL05|END8_SALTY RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|16419237|gb|AAL19672.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240486|gb|EDY23106.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328917|gb|EDZ15681.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261245991|emb|CBG23793.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992466|gb|ACY87351.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157319|emb|CBW16808.1| endonuclease VIII, DNA N-glycosylase with an AP lyase activity [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911755|dbj|BAJ35729.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226304|gb|EFX51355.1| Endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129038|gb|ADX16468.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987665|gb|AEF06648.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 263 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 108/292 (36%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F ++ + GE C CG +I + + R ++C +CQK Sbjct: 214 GQADENKHHGAL-FRFKLFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPHCQK 263 >gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 35/272 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 + ++L+ GM+G+ I+ + K +++ + I L + Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+E PP+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLEDPA--SVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKA 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +AGIGN E L+ A++ P++ SL + + L Q I++V+ A+ Sbjct: 174 LLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTR------ESCETLHQCIKQVIQYAV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 + +D F + + + G+ Sbjct: 228 E-----------VDAECSLFPLEWLFHFRWGK 248 >gi|188534437|ref|YP_001908234.1| endonuclease VIII [Erwinia tasmaniensis Et1/99] gi|188029479|emb|CAO97356.1| Endonuclease VIII [Erwinia tasmaniensis Et1/99] Length = 264 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD+ F + G+++I + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKGKVLTDVWFA-----FPALQTYQQMLVGERVIAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ ++P K+ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSG-SEPAKSKRVLRVRLAAADKT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L +GP+ D + + + + LL+Q + Sbjct: 110 ----IQLLDAQGLATHPFLLRVGPDVLDMALTQQQVRERLLSTRFRRRQFGALLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L + + R Sbjct: 166 AGLGNYLRVEILWQAQLAAQHKAETLSDKQLDALAEALLAVPRLSYR-----------TR 214 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G +F+V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 215 GQADENRHHGAL-FSFNVFHRAGKAC-RRCGESIVKTMLSSRPFYWCPGCQK 264 >gi|326329312|ref|ZP_08195637.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] gi|325952887|gb|EGD44902.1| putative formamidopyrimidine-DNA glycosylase [Nocardioidaceae bacterium Broad-1] Length = 287 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 19/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L +K+ +T + + + + + +A G + +V+R K++ Sbjct: 1 MPELPEVEALAEDLRGRLKDRAITKVHVAQFSALKTYDPPLTA-VEGTLVDNVTRHGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE + +++HL G A P + + + I + + +T + + Sbjct: 60 DIE-ASGIHLVLHLARGGWIRWRDEVPATPPRPGSKSGLAIRVVLDDDT-GLDITEGGTK 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + +V P + +LGP+P + F + +K L Q I+AG Sbjct: 118 KRLALYVVHDPQ--DVPGVASLGPDPLADDFTLARFREILAGQGRKQIKGVLRMQSIIAG 175 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW AK+SP + ++ L ++ L +A++ Sbjct: 176 IGNAYSDEILWAAKMSPFKPA-------EMTEEESESLYDALRTTLKEAVER-----DSG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G ++ +V+GK G+ C CG I + A S YC CQ Sbjct: 224 LAMSELKGEKKSNLAVHGKAGKKC-PVCGSTILEVSFADSSLQYCPTCQ 271 >gi|253576739|ref|ZP_04854066.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843949|gb|EES71970.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus sp. oral taxon 786 str. D14] Length = 272 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 117/288 (40%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F+ G+++I + RR K L Sbjct: 1 MPELPEMENYRIQLSQHILDLPITGVNVGREKSVNLPAADFARELMGRQVIFIERRGKNL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L+ + ++ + + S + V+Y Sbjct: 61 LFHLDNGRRL----------LLHLMLGGLLYLGSKEDRPERSTQVEITFGEKLVLYFIGL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G + L + L LGPE D N T K+ +LK L+NQ ++ GI Sbjct: 111 RLGHLHLHSAKEAEE--LLSHLGPELLDRRMNEERFTALLRKRRGSLKTTLVNQDVIPGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A+L P+ K ++ + + +L Q ++ VLI+A +AGG Sbjct: 169 GNCYADEIAFAAELLPMAKLQNFSDEDFS------RLYQAVRDVLIEATEAGGYMEMPLT 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G VY + GE C CG I + GR FY CQ Sbjct: 223 RDDQLTGGANEICRVYDREGETC-PRCGDTIVKAEMNGRKVFYSPGCQ 269 >gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 277 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 41/303 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI---CLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE RR + + ++ + + K F A G+KI R Sbjct: 1 MPELPEVEKARRLVHDLAIGSPISRVHRPIIDDKVFVDVASGQFERALSGRKITHSKRHG 60 Query: 58 KYLLIELEGNLSII--VHLGMSGSF---------IIEHTSCAKPIKNPQHNHVTISLTNN 106 K L +L+GN +++ H GM+G+F + P+ + ++ N Sbjct: 61 KQLWWQLDGNDALVPCFHFGMTGAFVARGIDGIQYYNSKASGTGDWPPRFAKLVVAFENG 120 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + DPRRFG + LV + + LGP+P N + ++++ Sbjct: 121 -----VELAFVDPRRFGKIKLVADVAEV----IGQLGPDPLLEMPNEEAFAALWRRRSAP 171 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K A+++QK++AGIGN E L+RA++ P + L ++ I+ + Sbjct: 172 IKTAIMDQKVIAGIGNWMADEILYRARVHPETRANELSSTQ----------LEAIRFRVT 221 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEP-CLSNCGQMIRRIVQAGRSTFYCT 285 + + + D+ F + + + + G+ G I+ I GR+T + Sbjct: 222 EVVKVACEANSDH-------DLFPDDWLFHHRWGKTGGAKVNGDAIKFIEVGGRTTAFVP 274 Query: 286 YCQ 288 Q Sbjct: 275 KLQ 277 >gi|152969290|ref|YP_001334399.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166920094|sp|A6T6E8|END8_KLEP7 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|150954139|gb|ABR76169.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 263 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLTGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + PQ N V L T ++ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGVE-----PQSNRV---LRVRLQTASKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 108 D---IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYR-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GLVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|158315457|ref|YP_001507965.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] gi|158110862|gb|ABW13059.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EAN1pec] Length = 272 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF + G+ + + K+LL+E Sbjct: 1 MPEGHTVHRLAAVHQRMFRGRPVTVSSPQGRFV---DGARMLDGQVLAEAEAHGKHLLLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G++ + P V + LT +T Y D R Sbjct: 58 FGDEQILHIHLGIYGTYALGPGPAPVPTGA-----VRLRLTADTG-------YADLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ LGP+P + + + + + LL+QK+VAG GNI Sbjct: 106 ACELLAPGEVKVLRD--RLGPDPLRADADPALAWRRIERSRTPIAVLLLDQKVVAGPGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+RA + P+ R L ++ D++ + ++ ID + + + + Sbjct: 164 YRAEVLFRAGIHPLLPGRELARDQWAAIWADLVTLMADGVRTGRIDTVRPAHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY +TG+PCL C +R + AGR+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRTGQPCL-ICAAEVRTVQLAGRNLFWCPACQ 267 >gi|320179452|gb|EFW54409.1| Endonuclease VIII [Shigella boydii ATCC 9905] Length = 263 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 111/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----SYQSQLIGQHVTHLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQVFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|296141029|ref|YP_003648272.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] gi|296029163|gb|ADG79933.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] Length = 290 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 119/291 (40%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY- 59 MPELPE+ I + + TV + + ++ F G + R KY Sbjct: 1 MPELPEITAIAQYVAEKAVGTTVRRVDVAALSVLKTFSPG-PHELVGATVTGTDRIGKYF 59 Query: 60 -LLIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L E EG ++++VHL +G P+K + + + + + + + Sbjct: 60 VLWTEKEGARVALVVHLSRAGWLRWSEKLAPTPLKPGGKSPIALRVHVGPEGEGFDLTEA 119 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 ++ + +V + + + TLGP+ + + + LKN L +Q+ + Sbjct: 120 GTQKRLAVWIVHDPSEIE--MVATLGPDAL--TVSRAEFGAILAGSRAQLKNLLRDQRTI 175 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN Y E L AKLSP +SL + + + E+ + ++ ++L+ Sbjct: 176 AGIGNAYSDEILHTAKLSPFAGAKSLDEAQTDA--LYAAMHTELDDAVARSVGQHVATLK 233 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ V+G+TG PC CG +R + A RS YC CQ Sbjct: 234 ---------AEKRSGMKVHGRTGSPC-PVCGDTVREVSFADRSFQYCPTCQ 274 >gi|283834003|ref|ZP_06353744.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] gi|291070140|gb|EFE08249.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Citrobacter youngae ATCC 29220] Length = 263 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K + D+ + L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRAADNLEAAVKGKPLMDVWFAFEQLK-----PYQSQLIGQRVTRLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T PQ + V L T+ ++ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVETG-----NVPQTSRV---LRVRLQTRDKTILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 108 D---IDMLTPEQLTTHPFLQRVGPDVLDLRLTPDDVKARLLSPRFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L L L + + + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKASQLSDEQ------LDALAHALLDIPRLSYN-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GLVDENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|229821354|ref|YP_002882880.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] gi|229567267|gb|ACQ81118.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] Length = 302 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 33/302 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + + + + + F + G+ + V R K+L Sbjct: 4 MPELPEVDALGEFLRERVVGREIVAVHIAQIGALKTFDPPLTD-LVGRTVTGVERHGKWL 62 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEH--TSCAKPIKNPQHNH-----VTISLTNN 106 + L +G ++ HL +G + + P P + + L + Sbjct: 63 DLALGRRGDADDGEPHLVFHLAKAGWLRWKDEMPPASTPAGRPMGRRAGPLALRVWLDDG 122 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + R+ + +V + P+ +LG +P + A L +N Sbjct: 123 ---AGFDLTEAGTRKRLAVHVV--GSPEEVGPIASLGFDP-RSELTAERLGAALRTRNQQ 176 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 LK AL +Q +VAGIGN Y E L A++SP T+SL D + +L ++VL Sbjct: 177 LKGALRDQTLVAGIGNAYSDEILHAARMSPFTLTKSLTD------DDVARLTDATRQVLD 230 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A+ A + +V+G+TGE C CG ++R + A RS YC Sbjct: 231 AAVAAASGKP-----AAELKDAKRRGMAVHGRTGETC-PVCGDVVREVSFADRSLQYCAT 284 Query: 287 CQ 288 CQ Sbjct: 285 CQ 286 >gi|302845178|ref|XP_002954128.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] gi|300260627|gb|EFJ44845.1| hypothetical protein VOLCADRAFT_42929 [Volvox carteri f. nagariensis] Length = 325 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 34/304 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R + + + + + F+ P A G++++ R+ K Sbjct: 1 MPELPEVEAAKRLMERGCVGKRIERVVAAKDDKVFEDASPDDVRRALEGRRVVAAHRKGK 60 Query: 59 YLLIELEG--NLSIIVHLGMSGSFIIEHTSCAKPIK-----NPQHNHVTISLTNNTNTKK 111 YL +EL+ L ++H GM+G ++++ K + NP + Sbjct: 61 YLWLELDNPDGLWPLLHFGMTGGIVVQNMGATKYKRIHLASNPDEWPPRFTKLELDLEGG 120 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN----- 166 +V + D RRFG + L+ + PL LG + D K+ + Sbjct: 121 AKVAFVDVRRFGRVKLLANPSAQE--PLSKLGFDVLDELPPLEQFIAAVRKRVARAPGLK 178 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K LL+Q+ +GIGN E L++A++ P + SL + L L + I+ V+ Sbjct: 179 IKALLLDQEFCSGIGNWVGDEVLYQARIHPEQSAASLGDS------ALAALRESIRSVVT 232 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG-EPCLSNCGQMIRRIVQAGRSTFYCT 285 A++ ++ + F + + + S G I + R++ + Sbjct: 233 QAVE-----------LEADVDRFPPEWLFHHRWNSRKPGSINGHKIEFVTVGSRTSAFVP 281 Query: 286 YCQK 289 QK Sbjct: 282 ALQK 285 >gi|262041218|ref|ZP_06014430.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041447|gb|EEW42506.1| endonuclease 8 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 263 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + PQ N V L T ++ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGVE-----PQSNRV---LRVRLQTASKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 108 D---IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYR-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GLVDDNKHHGAL-FRFKVFHRDGERC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|168786866|ref|ZP_02811873.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] gi|261224415|ref|ZP_05938696.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK2000] gi|261254594|ref|ZP_05947127.1| endonuclease VIII [Escherichia coli O157:H7 str. FRIK966] gi|189373038|gb|EDU91454.1| endonuclease VIII [Escherichia coli O157:H7 str. EC869] Length = 263 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKGL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|261341306|ref|ZP_05969164.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] gi|288316610|gb|EFC55548.1| endonuclease 8 (DNA glycosylase/AP lyase Nei) [Enterobacter cancerogenus ATCC 35316] Length = 263 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +T + L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTRVWFAFPQLK-----KYESMLVGQTVTHIDTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + + + P+ V L T V+ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVNAD-----EQPETTRV---LRVRLQTADKAVLLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L+ +GP+ D A + + +N L+Q + Sbjct: 108 D---IDMLTPEQLLTHPFLQRVGPDVLDMRLTASDVKARLLSPKFRNRQFSGLFLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ K L L L + ++ + + G + Sbjct: 165 AGLGNYLRVEILWDVGLAAQHKASQLSDAQ------LDALSHALLEIPRLSYNTRG--MV 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G++ F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 217 DDKKHHGAL----FRFRVFHRAGKKC-ERCGGIIEKTTLSSRPFYWCPGCQR 263 >gi|262201295|ref|YP_003272503.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] gi|262084642|gb|ACY20610.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 25/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I + + + + + ++ ++A G+ + V R KYL Sbjct: 1 MPELPEVAAIADYVDSRAAGLPIRRVDVASLSVLKTADPPYTA-LVGRIVESVGRVGKYL 59 Query: 61 LIELEGN--------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 +I + +++HL +G +P++ + + + + ++ + Sbjct: 60 VIRTVPGADTDPEPVILLVIHLSRAGWLRWSEDLSPRPLRPGGKSPIALRVHCGLPSEGF 119 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V ++ + +V + TLGP+ S + + +KN L Sbjct: 120 DVTEAGTQKRLAVWIVRD--LADIDRVATLGPDVL--SLSVSEFGAILAQTAGRIKNVLA 175 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+++AGIGN Y E L A+LSP +SL + + L ++ VL DA Sbjct: 176 DQRVMAGIGNAYSDEILHTARLSPFATAKSLTEEQ------VSTLYDAMRSVLADATGRL 229 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+ +TG PC CG +R + A RS YC CQ Sbjct: 230 EGQTVARLKSEKRTG-----LRVHARTGLPC-PVCGDTVREVSFADRSFQYCPTCQ 279 >gi|291616721|ref|YP_003519463.1| Nei [Pantoea ananatis LMG 20103] gi|291151751|gb|ADD76335.1| Nei [Pantoea ananatis LMG 20103] Length = 263 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 107/291 (36%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L M + + D+ L+ + GK++ + R K L Sbjct: 2 MPEGPEIRRVADQLEMAIVGQPLADVWFAFPALK-----TYEPTLVGKRVESIETRGKAL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + + L + ++Y+ Sbjct: 57 LTHFSNGLTLYSHNQLYGVWRIVSPDVQPETK----RQLRVRLATAD---QAILLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ + + + + LL+Q + Sbjct: 110 ----IELLNAETLASHPFLNRIGPDVLSPALTPEEVKQRLLSARFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P +SL ++ L + V A G+ + Sbjct: 166 AGLGNYLRVEILWLAQLLPHHNAQSLSESQ------LDAFSDALLSVPRHAYRMRGTMKK 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 220 YHSEA-------AFRFEVFHRQGKTC-RRCGTVIVKGVLSSRPFYWCPGCQ 262 >gi|166157053|emb|CAO79510.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11] Length = 293 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 19/290 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV I ++L + + +I + R + + KKI DV R AK + Sbjct: 1 MPELPEVHTISQDLKNNIVGYKIENIQIERNYKIPEIEKIRLGKIKDKKISDVERIAKNI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I+L N ++ HL M+G I+ P K + I + N + + + D R Sbjct: 61 VIKLSENEFLVFHLAMTGRIIL------TPSKEKKDKWTKIVFKISKNGDEKYLKFCDMR 114 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + +++ + G + + + KN+ +KNA ++QKI++G+ Sbjct: 115 QFGKIKVLDEKSLSELR--NKYGLDILEGNITPDKFLEIIKSKNTTIKNAFMDQKIISGV 172 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-- 238 GNIY +AL+ A ++P +T+ + L+ ++++L + I G++L D Sbjct: 173 GNIYATDALFLAGINPKTRTKDI------NLQKSENLLSSLKQILQEGIKNRGATLPDEM 226 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YV I G G Q F +YGK P CG + GR T+ C CQ Sbjct: 227 YVDIFGKPGNQQKHFKIYGKKICP---RCGARVSFEKINGRGTYSCPVCQ 273 >gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] Length = 263 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 29/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV ++ + + + +I K + F SR KYL Sbjct: 1 MPELPEVAYQKKYADATILHKKIVEIETGDKKIYQSAKADFEKILTDNAFESTSRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ N +++H GM+G + P++ + + +++ ++ + PR Sbjct: 61 FLKLKKNGVLVMHFGMTGKL-----DYYQHDDTPKYTQLKLIFEDHS-----KLAFTCPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +F + L ++ ++Q LG + + ++ +K L+NQ ++AGI Sbjct: 111 KFAKLYLAKSVEEFQQS--HNLGADAL--AITEKEFLKICDGRSGTIKGLLMNQSLIAGI 166 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L++ K+ P K +L Q ++ I+E+ KV+ +A G Y+ Sbjct: 167 GNMYADEVLFQTKIHPKTKVNTLSQKQLKS---IFDKIEEVLKVVKEARIEGKRVPESYL 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G C N G I + +GR+T++C CQK Sbjct: 224 TRIRKEG-----------EGADCPRNNG-KIEQTKVSGRTTYFCPVCQK 260 >gi|297194363|ref|ZP_06911761.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] gi|197720982|gb|EDY64890.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces pristinaespiralis ATCC 25486] Length = 271 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 109/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + ++ + +F +A G+ + K+L + Sbjct: 1 MPEGHTIHRLAEDYLHRFAGWNVRVSSPQGKFSDS---AALLDGRVLDGADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + +HLG+ G P + V + ++N + Y D R Sbjct: 58 FEDIGWVHIHLGLFGKLGFGPAPAP-----PATDTVRLRVSNEEH-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P S + + + + + L++QKI+AG+GN+ Sbjct: 106 TCALITGPEKRAIHD--RLGPDPLRPSDDPDRAWARISRSRTTIAALLMDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R + L + +D+ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRAGKDLTRRQWDAIWEDLAALMREGVRNNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY +T PCL C IR + R+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRTNMPCL-VCDTRIRTAALSARNLFWCPACQ 267 >gi|146310878|ref|YP_001175952.1| endonuclease VIII [Enterobacter sp. 638] gi|166920092|sp|A4W871|END8_ENT38 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|145317754|gb|ABP59901.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 263 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 110/292 (37%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T+ L+ F ++ G+K+ + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTNAWFAFPQLK-----SFESSLIGQKVTQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L NL++ H + G + + +H + L T ++ Sbjct: 56 LTHFSHNLTLYSHNQLYGVWRVVDAG--------EHPQTSRILRVRLQTADKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D A + + +N LL+Q + Sbjct: 108 D---IEMLTPEQLLTHPFLQRVGPDVLDMRLTAEEVKARLLSPKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW L+ RK L + L L + ++ + + R Sbjct: 165 AGLGNYLRVEILWEVGLAAQRKASQLSEEQ------LDALSHALLEIPRLSYN-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G F V+ + G+ C CG +I R + R + C CQK Sbjct: 214 GVVDDNKHHGAL-FRFKVFHREGKAC-ERCGGVIERSTLSSRPFYGCPVCQK 263 >gi|317047339|ref|YP_004114987.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] gi|316948956|gb|ADU68431.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pantoea sp. At-9b] Length = 262 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L M +TD+ L+ + A G + + R K L Sbjct: 1 MPEGPEIRRAADQLAAAMTGKPLTDVWFAFPQLK-----TYEPALLGATVTAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T A + + L N T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVPTGTAPQTA----RQLRVRLANVDQT---ILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L+ +P L+ +GP+ D S + + + LL+Q + Sbjct: 109 ----IELLNAETLATHPFLQRVGPDVLDASLTVEAVQERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L + L + L + + V + GS + Sbjct: 165 AGLGNYLRVEILWHAQLLAQHRALDLHAAQ------IQALSEALLAVPRHSYQMRGSMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + F V+ + G+ C CG +I + V + R ++C CQ+ Sbjct: 219 YHEDA-------AFRFEVFHRQGKKC-RRCGTLIEKGVLSSRPFYWCPGCQR 262 >gi|300741669|ref|ZP_07071690.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] gi|300380854|gb|EFJ77416.1| DNA-formamidopyrimidine glycosylase [Rothia dentocariosa M567] Length = 294 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R L V + + R+ +A G I++ K+L Sbjct: 1 MPEGHSIHRIARQLNDVFTG---ESVRVSSPQGRYT---DGAALLDGASILNAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + L++ VHLG+ G++ + I ++ K Sbjct: 55 FVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYTAGEAEEYTGPPAPK 114 Query: 112 YRVIYNDPRRFGFMDLV-----ETSLKYQYPPLR-TLGPEPADNSFNAIYLTHQFHKKNS 165 G+ DLV T + +R LGP+P + N K + Sbjct: 115 GTTRCRIVSEHGWADLVGPTICRTLNPDEVTQIRAKLGPDPLNTDANPERFYTAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R ++L D L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKTLTD------DELRRLWEDNKHLL 228 Query: 226 IDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + G + +D I + + ++A VY GEPC CG IR AGR + Sbjct: 229 TIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHHGEPC-PRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|303311231|ref|XP_003065627.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105289|gb|EER23482.1| Formamidopyrimidine-DNA glycosylase N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320039451|gb|EFW21385.1| formamidopyrimidine-DNA glycosylase [Coccidioides posadasii str. Silveira] Length = 416 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 41/310 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH---------TSCAKPIKNPQHNHVTISLTNNT 107 KY + + ++H GM+G I+ P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEGDGPWPPKFWKFRLVMDDD- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 KK + D RR G + LV+ + + PL+ GP+P + +L KK Sbjct: 120 --KKTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVTDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + +L + + +L I Sbjct: 178 KVPIKALLLDQSIMSGLGNWMADEVLYHSQIHPEQTSNTLDDSQ------IRELNSAIHY 231 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK----TGEPCLSNCGQMIRRIVQAGR 279 V ++D G S R F + ++ + EP G + I GR Sbjct: 232 VCATSVDLLGDSAR-----------FPADWLMHHRWNKGKKEPSKMLNGDPVTFITVGGR 280 Query: 280 STFYCTYCQK 289 ++ QK Sbjct: 281 TSAIVPAVQK 290 >gi|317121268|ref|YP_004101271.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] gi|315591248|gb|ADU50544.1| formamidopyrimidine-DNA glycosylase [Thermaerobacter marianensis DSM 12885] Length = 368 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 37/244 (15%) Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 +++HL M+G + P H + L ++ ++DPRRFG + L+ Sbjct: 127 WLVIHLRMTGRLTLARCG------EPLLPHTHLILDVAGAAPWDQLRFSDPRRFGRVYLL 180 Query: 129 ETS------------------------LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 S LRTLGPEP F A L + + Sbjct: 181 SKSPFSRRAVSGRARDTADRETELRHREDALPEGLRTLGPEPLSRRFTAAELARRLAGRR 240 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 + +K+ LL+Q+ VAG+GNIY EAL+RA++ P R L + +L++ +++V Sbjct: 241 APVKSLLLDQRAVAGVGNIYADEALFRARIHPARPAGELSPAE------VARLVRALRRV 294 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +A+ AGG++ DY G G F + YG+ GEPCL CG I + GR+ +C Sbjct: 295 LREAVAAGGTTFSDYRDGLGREGRFARRLAAYGRQGEPCL-RCGTPIATLRLGGRTAHFC 353 Query: 285 TYCQ 288 CQ Sbjct: 354 PRCQ 357 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE +RR+L ++ + + + R ++ P A G + +RR KY Sbjct: 1 MPELPEVETVRRDLERHLEGAWIAGVRVLRPDVVVGATPPALERAIVGARFRRFARRGKY 60 Query: 60 LLIELE 65 LL+ELE Sbjct: 61 LLLELE 66 >gi|311744402|ref|ZP_07718203.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] gi|311312207|gb|EFQ82123.1| DNA-(apurinic or apyrimidinic site) lyase [Aeromicrobium marinum DSM 15272] Length = 286 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 26/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PEV+ + +L V I L ++ + G + DV R K++ Sbjct: 1 MPEMPEVDALVAHLRERCVGAVVAGIELGSFSVLKTVDPPLDSF-AGLSVTDVRRHGKFI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK---NPQHNHVTISLTNNTNTKKYRVIYN 117 ++++ L ++ HL +G IK P V + T + T + + Sbjct: 60 DLDVD-GLHLVFHLAKAGWLRWSDRFSPARIKMGNGPLALRVRLD-TGDGPTAGFDLTEA 117 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 R+ + V + P + LGP+P + F+ L + +K L +QKIV Sbjct: 118 GTRKGLAVYAVRD--VAEVPGVAALGPDPLADGFDLRPLLAR----RMQVKRLLRDQKIV 171 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI-DAGGSSL 236 AGIGN Y E L A+LSP +L + D + L ++ VL A+ +A G Sbjct: 172 AGIGNAYSDEILHAARLSPFAIAENLDE------DQVAALAAAVRDVLSAAVSEAHGKPA 225 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + V+G+TG+PC CG + + + S YC CQ Sbjct: 226 AELKD------DKRTRMRVHGRTGQPC-PVCGDTVAEVAFSDSSLQYCPTCQ 270 >gi|311113768|ref|YP_003984990.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] gi|310945262|gb|ADP41556.1| DNA glycosylase [Rothia dentocariosa ATCC 17931] Length = 294 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 31/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R L V + + R+ +A G I++ K+L Sbjct: 1 MPEGHSIHRIARQLNDVFTG---ESVRVSSPQGRYT---DGAALLDGASILNAYAHGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------SCAKPIKNPQHNHVTISLTNNTNTKK 111 + L++ VHLG+ G++ + I ++ K Sbjct: 55 FVPFNNELTLNVHLGIYGNWSFGGDETFTGASSIGAPRKIGEKEYTAGEAEGYTGPPAPK 114 Query: 112 YRVIYNDPRRFGFMDLV------ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 G+ DLV + LGP+P + N K + Sbjct: 115 GTTRCRIVSEHGWADLVGPTICRTLNPDEVAQVRAKLGPDPLNTDANPERFYAAARKSSR 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q ++G+GNI+ E+L+R ++ P+R ++L D L +L ++ + +L Sbjct: 175 PIGVILMDQAAISGVGNIFRAESLYRQEIDPLRPGKTLTD------DELSRLWEDNRHLL 228 Query: 226 IDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + G + +D I + + ++A VY GEPC CG IR AGR + Sbjct: 229 TIGVRVGRIITTEQKDRPGIHETEAWPEHANYVYQHHGEPC-PRCGTTIRMEEIAGRKLY 287 Query: 283 YCTYCQK 289 +C CQK Sbjct: 288 WCPGCQK 294 >gi|329934547|ref|ZP_08284588.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] gi|329305369|gb|EGG49225.1| DNA repair hydrolase [Streptomyces griseoaurantiacus M045] Length = 270 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 105/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + T + + +F T + K+L + Sbjct: 1 MPEGHTIHRLAQDYARFTARTALRVTSPQGKFADAAALLDRTE---LTATEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L ++T Y D R Sbjct: 58 FAATGWVHIHLGLFGKVAFGDAPAPPPT-----DTVRLRLADDT-------AYVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + L++QK+VAG+GN+ Sbjct: 106 TCALITEPEKRAIH--ARLGPDPLRADADPAVAYRRISRSRTTIAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRPGRDLTPAAWDALWADLVDLMREGVRHNRIDTVRPAHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G+ C CG +R AGR+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRAGQAC-HLCGTPVRTAALAGRNLFWCPTCQ 267 >gi|41408382|ref|NP_961218.1| hypothetical protein MAP2284c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396738|gb|AAS04601.1| hypothetical protein MAP_2284c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 268 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVSSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + + D R Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGAGHG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDEGQVSDV--LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAEFDAA------WTDLVALMKVGLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|310767016|gb|ADP11966.1| endonuclease VIII and formamidopyrimidine-DNA glycosylase [Erwinia sp. Ejp617] Length = 264 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H + G + I ++ +P ++ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGQTLYSHNQLYGVWRIINSGV-EPAQSKRVLRVRLAAADKT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLATHPFLQRAGPDVLDRALTAEQVRERLLSKRFRLRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L +A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILRQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQA-- 217 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G++ +F V+ + G+ C CG+ I + + + R ++C CQK Sbjct: 218 DENHHHGAL----FSFKVFHRAGKACQ-RCGETIVKTMLSSRPFYWCPGCQK 264 >gi|163839232|ref|YP_001623637.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952708|gb|ABY22223.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 294 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 28/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+ + L V++ + + + R + + V R K++ Sbjct: 1 MPELPELVGLSTYLSSVLRGQLLESLQIASFTALKTAGVQPEEILR-RAVESVRRHGKFV 59 Query: 61 LIELE------GNLSIIVHLGMSGSFIIEHTSCAK---PIKNPQHNHVTISLTNNTNTKK 111 IE + +I HL +G S + P+K + + + K Sbjct: 60 DIEFGASASDPSGIHLIFHLAKAGWLKYAAKSAGEKPAPVKPGGYITARMIFND----AK 115 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + R+ + LV + + P + TLGP+P + F L K + +K+ L Sbjct: 116 IDLTEAGTRKSLAIYLVRSQDE--VPGIITLGPDPLSDEFTLEVLKAILAPKRAQIKDVL 173 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 +QK++AGIGN Y E L A+LSP + SL + D + L Q I+ +L +A++A Sbjct: 174 RDQKMIAGIGNAYSDEILHLARLSPFAASNSLTE------DQMAALYQSIKSILREAVEA 227 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+ +TG+ C CG +R + A R+ YC CQ Sbjct: 228 ASGRPASDLKDTKRSG-----MRVHARTGQDC-PECGDTVREVAFADRTLQYCPRCQ 278 >gi|326383692|ref|ZP_08205377.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] gi|326197456|gb|EGD54645.1| DNA-formamidopyrimidine glycosylase [Gordonia neofelifaecis NRRL B-59395] Length = 294 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 26/296 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV I L + + + + L+ P + A G+ + V R KY Sbjct: 1 MPELPEVTAIATFLDSRAAGLPIRRVDVASLAVLKTADPPY--TALAGRIVSAVDRIGKY 58 Query: 60 LLIELEGNLS-------IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+I +++HL +G P K + + + + + Sbjct: 59 LVIRTAPGAGEADVEIDLVIHLSRAGWVRWSDALSQTPPKPGGKGPIALRVHCGLPGEGF 118 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 V ++ +V + + + + +LGP+ + + +KN + Sbjct: 119 DVTEAGTQKRLAAWIVRDTAEIER--ISSLGPDVLG--LSRDEFGAILAGSTARIKNLIT 174 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++++G+GN Y E L A+LSP ++S+ D + L + + VL+ AI+ Sbjct: 175 DQRVISGVGNAYSDEILHTARLSPFATSKSISD------DHVDDLYEATRSVLLGAIERL 228 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+ +TG PC CG +R + A RS YC CQ Sbjct: 229 EGQEVARLKSEKRTG-----LRVHARTGMPC-PVCGDTVREVSFADRSFQYCPTCQ 278 >gi|327188618|gb|EGE55828.1| formamidopyrimidine-DNA glycosylase protein [Rhizobium etli CNPAF512] Length = 166 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 1/166 (0%) Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 MD+V + +P R LGPEP N A YL +F K LK+ALL+QK VAG+GNIY Sbjct: 1 MDMVRRADLAAHPFFRDLGPEPTGNDLGAAYLAERFRDKAQPLKSALLDQKNVAGLGNIY 60 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 VCEALWR+ LSPIR +L+ G PK+ L L+ I+ V+ DAI AGGSSLRD++ DG Sbjct: 61 VCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAGGSSLRDHIQTDG 120 Query: 245 SIGYFQNAFSVYGKTGEPC-LSNCGQMIRRIVQAGRSTFYCTYCQK 289 S+GYFQ++FSVY + G+ C CG + RIVQAGRSTFYC CQK Sbjct: 121 SLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK 166 >gi|118465909|ref|YP_880937.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium 104] gi|254774526|ref|ZP_05216042.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium avium subsp. avium ATCC 25291] gi|118167196|gb|ABK68093.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium avium 104] Length = 268 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 113/288 (39%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVAVTSPQGRF---AEAAAVVDGRVLRRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GSF P+ +P V + + ++ D R Sbjct: 58 YAGGPIVHVHLGLYGSFSEWERPGDGPLPDPV-GQVRMRMVGASHG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P + + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDEGQVSDV--LARLGPDPLRDDADPSWAWQRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + ++ ++ + G + H Sbjct: 168 YRSELLFRHGIDPYRAGRDVGEAEFDAA------WTDLVALMKVGLRRGKIIVVRPEHDR 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG+ +R V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRAGEAC-RVCGEPVRTAVLEGRNVFWCPTCQK 268 >gi|255080114|ref|XP_002503637.1| predicted protein [Micromonas sp. RCC299] gi|226518904|gb|ACO64895.1| predicted protein [Micromonas sp. RCC299] Length = 292 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 115/292 (39%), Gaps = 38/292 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK----NLRFDFPHH--FSAATRGKKIIDVS 54 MPELPEVE R + VT + + F F +A K + Sbjct: 1 MPELPEVESARCLVEAHCIGAKVTKVEFNEDGSFDEKIFKDVERKAFVSALLNKTLTAAH 60 Query: 55 RRAKYLLIELEGN-LSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTISLTN 105 RR K++ ++ G S + H GM+G+F I K P+ + ++ N Sbjct: 61 RRGKHMWWDMSGGADSPLFHFGMTGAFSIRGKGAMKYKAFVVDTSNWPPRFAKLVVTFDN 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + Y DPRRFG + LV PP+ LG +P + +F K+ Sbjct: 121 G-----IALAYTDPRRFGRIRLVR-GDVTASPPISELGFDPLLAMPDEAAFASRFAKRGG 174 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K+ LL+Q I AG+GN E L+ ++L P + +SL L L ++ V+ Sbjct: 175 PIKSVLLDQTIAAGVGNWIADEVLYHSRLHPEQPAKSLTPAQ------LRDLRDAMEDVI 228 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA 277 A DAG + F + + + + G+ G+ I+ I Sbjct: 229 KTACDAGADAEM-----------FPDDWLFHHRWGKVAGEVGGEPIQFITVG 269 >gi|320637961|gb|EFX07730.1| endonuclease VIII [Escherichia coli O157:H7 str. G5101] Length = 263 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +G + D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGSDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + +I + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLDIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|327393146|dbj|BAK10568.1| endonuclease VIII Nei [Pantoea ananatis AJ13355] Length = 262 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 108/291 (37%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L M + + D+ L+ + G+K+ + R K L Sbjct: 1 MPEGPEIRRVADQLEMAIVGQPLADVWFAFPALK-----TYEPTLVGEKVESIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + + L + ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVSPDVQPETK----RQLRVRLATAD---QAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ ++ + + + LL+Q + Sbjct: 109 ----IELLNAETLASHPFLNRIGPDVLSHALTPEEVKQRLLSARFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P +SL ++ L + V A G+ + Sbjct: 165 AGLGNYLRVEILWLAQLLPHHNAQSLSESQ------LDAFSDALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 219 YHSEA-------AFRFEVFHRQGKTC-RRCGTVIEKGVLSSRPFYWCPGCQ 261 >gi|254382780|ref|ZP_04998137.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] gi|194341682|gb|EDX22648.1| endonuclease VIII/DNA N-glycosylase [Streptomyces sp. Mg1] Length = 268 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 110/288 (38%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF +A G+++ K+L +E Sbjct: 1 MPEGHTIHRLAQDHTERFAARPVRVSSPQGRFADS---AALLDGRELESAEAHGKHLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 L G+ I +HLG+ G P + V + L N + Y D R Sbjct: 58 L-GDAWIHIHLGLFGKLGFGPAPAP-----PATDTVRLRLLNADH-------YADLRGPT 104 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 105 ACALIGEGEKKAIHD--RLGPDPLRPGDDPDRAWRRVSRSRTTVAALLMDQKVIAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R + L + D++ + + ++ ID + L + + Sbjct: 163 YRAEVLFRHGIDPYRLGKDLTRAEWDALWADLVLLMREGVRNNRIDTVRD--EHLPEAMG 220 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 221 RPPRVDDHGGEVYVYRRANMPC-HICGDEIRTAGLAARNLFWCPGCQR 267 >gi|87312113|ref|ZP_01094219.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] gi|87285209|gb|EAQ77137.1| formamidopyrimidine-DNA glycosylase [Blastopirellula marina DSM 3645] Length = 281 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 137/297 (46%), Gaps = 27/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPELPEVE +RR ++ ++ VTD+ C R L F T +++ + R Sbjct: 1 MPELPEVETMRRGILSIIGGK-VTDVAKPPCARRPILLAPGIAAFRRRTVDRRVTAIDRV 59 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K ++I LEG I++ M+G ++ P H+ ++ + +V + Sbjct: 60 GKRVVIVLEGGDRIVLEPRMTGLVLVAD--------PPTREHLRWEMSLADCGVE-KVWF 110 Query: 117 NDPRRFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 D R G + L E ++ +GP+ S+ L + K +K ALL+QK Sbjct: 111 WDRRGLGSVRLFSEREFVAEFSESGKIGPDALVISW--QELRDRLAKSRRAVKVALLDQK 168 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 V G+GN+Y E L AK+ P +L ++ + VL +AI GS+ Sbjct: 169 GVCGVGNLYAAELLHVAKVHPATPCEALSTA------AWKRIHAAMVDVLQEAIKYEGST 222 Query: 236 LRD--YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFYCTYCQK 289 L D Y + G +QN VYG+ GE C CG+ + RIVQA R+TFYC CQK Sbjct: 223 LGDGTYRNALNKDGGYQNCHRVYGREGELC-RTCGKVEVIRIVQAQRATFYCERCQK 278 >gi|317508930|ref|ZP_07966566.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252771|gb|EFV12205.1| formamidopyrimidine-DNA glycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 282 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L V + + ++ S G+K+ V R K+L Sbjct: 1 MPELPEVQALANFLADRAVGTAVRGVDVCAFSVLKTAAPPISE-LVGQKVEQVGRAGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I G L +++HL +G + +P K P + + + + + + + Sbjct: 60 IIRC-GELRLVIHLSRAGWLRWIRETPERPPK-PGRGPLALRVRCGGERESFELTEAGTQ 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + +V + P + LGP+ D + L + +KN L++Q ++AGI Sbjct: 118 KRLAVWVVRD--EADVPSVAKLGPDALD--LDEAGLAGILAGTTARIKNVLVDQHLIAGI 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ AK+SP + L ++ VL++A++ + Sbjct: 174 GNAYSDEILFAAKISPFSPSDKTDPGQ---------LFPALRGVLLEAVERAVGQEAALL 224 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G V+G+TGEPC + CG ++R + A RS YC CQ Sbjct: 225 KAEKREG-----MRVHGRTGEPCSA-CGDVVREVSFADRSWQYCATCQ 266 >gi|302534414|ref|ZP_07286756.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302443309|gb|EFL15125.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 268 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF +A G+++ K+L +E Sbjct: 1 MPEGHTIHRLAQDHTERFAARPVRVSSPQGRF---AESAALLDGRELESAEAHGKHLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 L G+ I +HLG+ G P + V + L N + Y D R Sbjct: 58 L-GDAWIHIHLGLFGKLGFGPAPAP-----PATDTVRLRLLNEDH-------YADLRGPT 104 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + + L++QK+VAG+GN+ Sbjct: 105 ACALIGEGEKKAIHD--RLGPDPLRPADDPGRAWTRISRSRTTVAALLMDQKVVAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + D+ + + +++ ID + L + + Sbjct: 163 YRAEVLFRHGIDPYRLGRDLTRAEWDAMWADLAALMREGMRRNRIDTVRD--EHLPEAMG 220 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 221 RPPRVDDHGGEVYVYRRANMPC-HICGGEIRTADLAARNLFWCPTCQQ 267 >gi|282862271|ref|ZP_06271333.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282562610|gb|EFB68150.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 275 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 111/289 (38%), Gaps = 20/289 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQAAKRLDTALAGHVLTRSDLR-------VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +E L++ HL M GS+ + + + P H + T YR+ Sbjct: 54 LTRVEDGLTLHSHLRMDGSWRL-YAPGERWRGGPAHQIRAVLETAERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 ++L+ T + Q + LGP+ ++ L ALL+Q+ +AG Sbjct: 107 --PVLELIRTRDEDQV--VGHLGPDLLGPDWDPDTAERNLRSAPGRPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y CE + A+ +P L T K + E + ++ Sbjct: 163 IGNVYKCELCFMARATPWLPVGELPPATMTRLVRTAKQLLEANRDNPSRTTTAPVAVSAR 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F+ VYG+ PCL C IRR+ R T++C CQ Sbjct: 223 PDRMREARRFRERLFVYGRADRPCL-RCATPIRRVELDNRPTYWCPGCQ 270 >gi|238893757|ref|YP_002918491.1| endonuclease VIII [Klebsiella pneumoniae NTUH-K2044] gi|238546073|dbj|BAH62424.1| endonuclease VIII [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 263 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +T++ L + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTNVWFAFPQL-----QPYQTQLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + PQ N V L T ++ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGVE-----PQSNRV---LRVRLQTASKAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D++ +P L +GP+ D + A + + +N LL+Q + Sbjct: 108 D---IDILTAEQVANHPFLLRVGPDVLDMTLTAEQVKARLLSAKFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + L L + + + R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQ------LDALAHALLDIPRLSYR-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG++I + + R ++C CQ Sbjct: 214 GLVDDNKHHGAL-FRFKVFHRDGERC-ERCGRIIEKTTLSSRPFYWCPGCQ 262 >gi|168988643|pdb|2OQ4|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate gi|168988644|pdb|2OQ4|B Chain B, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (E2q) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P+ PE+ NL +K +TD+ L+ + + G+ + V R K LL Sbjct: 1 PQGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + PQ V + +D Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD--- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATRG 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 QVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|239941135|ref|ZP_04693072.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 15998] gi|239987613|ref|ZP_04708277.1| putative DNA repair hydrolase [Streptomyces roseosporus NRRL 11379] gi|291444576|ref|ZP_06583966.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291347523|gb|EFE74427.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 277 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G + K+L + Sbjct: 1 MPEGHTIRRLADDHTERFAGAPVRVSSPQGKFSDS---AALLDGHTLTTADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N + Y D R Sbjct: 58 FGDTGWVHIHLGLFGKLGFGAAPPPPPTET-----VRLRLVNAGH-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 106 TCALITEPEKRAIH--ERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNG--TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + D++ + + ++ ID + L + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRAEWDTVWADLVELMREGVRNNRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 222 RPPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|239979455|ref|ZP_04701979.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291451324|ref|ZP_06590714.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291354273|gb|EFE81175.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] Length = 318 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G + K+L ++ Sbjct: 1 MPEGHTLHRLAADHQEWFGGRPVRVSSPQGRFAAS---AALLDGAEFAGAEAHGKHLFLD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G+ + +HLG+ G + P + + + +T ++D R Sbjct: 58 FGGHGWVHIHLGLFGKV-----ARGTGAPPPPTDTIRLRITAED-------AWSDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + L++QK+VAG+GN+ Sbjct: 106 ACTLLTDEDKQAVHD--RLGPDPLRADDTPDAAWRRISRSRTAVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P L + + D+ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYTPGNRLTRATWDTLWYDLAALMREGVRHDRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PCL CG+ IR A R+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRDGRPCL-VCGEQIRTASLAARNLFWCPRCQ 267 >gi|320533366|ref|ZP_08034058.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] gi|320134436|gb|EFW26692.1| formamidopyrimidine-DNA glycosylase [Actinomyces sp. oral taxon 171 str. F0337] Length = 346 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 81/344 (23%), Positives = 133/344 (38%), Gaps = 71/344 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + RR Sbjct: 1 MPELPEVEVVRTGLTKHVAGRTVTRVEVLDPRPLRRQDGGAQAFIDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHT-SCAKPIKNP---------------------- 94 K+L + L+ ++ HLGMSG ++ T S P +P Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTSVTTPGADPESNRATAFLADPDTLPGGRPVD 120 Query: 95 -----------------QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 +H V + L+ + ++ D R G + +V+ + Sbjct: 121 LSATEQPRYVRDISTSARHLRVRLHLSGDAGGAVLDLV--DQRMLGGLHVVDLTPTDDGA 178 Query: 138 PLRTLGPEPADNSFNAIYLTHQF-----------------HKKNSNLKNALLNQKIVAGI 180 P P P + +A ++ +K LL+Q +V+GI Sbjct: 179 PGGMGDPRPLLPT-DATHIARDLLDPALDLTGPTGVVVRVRASRRAIKTQLLDQGLVSGI 237 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-Y 239 GNIY E LW A + +R L ++ ++++ +V+ A++ GG+S Y Sbjct: 238 GNIYADEGLWEAGVHGLRPGTGLCPR------VVARILESTAEVMRRALEVGGTSFDALY 291 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 V ++G+ G+F YG+ G C CG + R GRS Y Sbjct: 292 VDVEGAAGFFARELGAYGRQGLGC-RRCGATMAREALGGRSHTY 334 >gi|51247248|pdb|1Q3B|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The R252a Mutant At 2.05 Resolution. gi|168988638|pdb|2OPF|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli (R252a) In Complex With Ap-Site Containing Dna Substrate Length = 262 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE PE+ NL +K +TD+ L+ + + G+ + V R K LL Sbjct: 1 PEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + PQ V + +D Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD--- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATRG 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + ++C CQ Sbjct: 214 QVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSAPFYWCPGCQ 261 >gi|30695252|ref|NP_849798.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana] gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis thaliana] gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 274 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 106/279 (37%), Gaps = 35/279 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL--HRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + + + + K + P F + GK II R+ K Sbjct: 1 MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK---------PIKNPQHNHVTISLTNNTNT 109 L +EL+ GM+G+ I+ + K +++ + L + Sbjct: 61 NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 + + D RRF + L+ P+ LGP+ KK +K Sbjct: 118 --LELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKP 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q ++GIGN E L++A++ P++ SL K+ L I++V+ A Sbjct: 174 LLLDQGYISGIGNWIADEVLYQARIHPLQTASSLS------KEQCEALHTSIKEVIQHA- 226 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 V ++ F + + + G+ G Sbjct: 227 ----------VQVNADSKEFPVEWLFHFRWGKKAGKVNG 255 >gi|189189872|ref|XP_001931275.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972881|gb|EDU40380.1| formamidopyrimidine-DNA glycosylase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 424 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 119/309 (38%), Gaps = 40/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + L + T+ + ++ + F A GKK++D ++ Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTIKGVNALDDDIVYGKVGTSASAFKKAITGKKVVDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTS--------CAKPIKNPQHNHVTISLTNNTN 108 KY + L+ + H GM+G I++ K P+ + + Sbjct: 61 GKYFWLVLDTPPHPLFHFGMAGWLEIKNEETGYYRSAKPEKTEWPPKFWKFVLQMEEE-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFHKKN 164 + V + D RR + LV+ + + + PL+ GP+P D S +L + K Sbjct: 119 -PENEVAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVEWLGKKLRSKK 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++GIGN E +++AKL P + + + + L + I V Sbjct: 178 VPVKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQ------IKTLHEAIMYV 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRS 280 A+ A G S F + + + G E G+ I + GR+ Sbjct: 232 CDTAVAANGDS-----------DLFPEHWLMKHRWGKGKKEASKLPNGEKITFLKVGGRT 280 Query: 281 TFYCTYCQK 289 + QK Sbjct: 281 SAIVPSVQK 289 >gi|311280406|ref|YP_003942637.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] gi|308749601|gb|ADO49353.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Enterobacter cloacae SCF1] Length = 263 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 103/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L +K +T + L + G+ + + R K L Sbjct: 1 MPEGPEIRRAADSLEAAIKGKPLTGVWFAFPQL-----AQYQLLLVGQTVTHIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + P V +D Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVEAGT-----LPDTTRVLRVKLQTAEKAILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLATHPFLQRVGPDVLDMALTPECVRARLLLPSFRNRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K L L L + + + G++ Sbjct: 165 AGLGNYLRVEILWQVGLTAQHKASGLSDAQ------LDALCHALLDIPRLSYRTRGNA-- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + +QA R ++C CQ Sbjct: 217 ---DDNKHHGAL-FRFKVFHRDGETC-ERCGGIIAKTLQASRPFYWCPGCQ 262 >gi|111018385|ref|YP_701357.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110817915|gb|ABG93199.1| probable DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 265 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 106/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVRVLSPQGRF---SEDAALVDGRVLVKSEAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G+F P+ V + + D R Sbjct: 58 YESGLVVHVHLGLYGAFTESAVPMEPPV-----GQVRMRMVGAEFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + + + L++Q ++AGIGN+ Sbjct: 106 ACEVLHPPQVAAIE--ARLGPDPLRKDADPDKAWKRISASKTPIGALLMDQAVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++P R R+L + D L ++ ++ + G + Sbjct: 164 YRAEVLFRHGINPDRPGRALSR------DEWDALWADLVALMKVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG + V GR+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RICGTPVTHSVMKGRNLFWCPSCQ 263 >gi|317491180|ref|ZP_07949616.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920727|gb|EFV42050.1| formamidopyrimidine-DNA glycosylase H2TH domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 263 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 112/292 (38%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + +T++ L+ H+ G+KI D+ R K L Sbjct: 1 MPEGPEIRRAADKLTDAVVGKPLTEVWFAFPQLK-----HYQPQLIGEKIEDIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I K + V + + Sbjct: 56 LTHFSNGLTMYSHNQLYGVWKIVAAGDTPNTK--RDLRVRLETEDQAILLYSASDIT--- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + Q+P L+ +GP+ D A + + + LL+Q+ + Sbjct: 111 ------IAPREEIAQHPFLQRVGPDVLDLRLTAEQVKERLMLPAFRRRQFGGLLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L+P +SL L L + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWDAELAPTHNAQSLRPEQ------LEHLSHALLEIPRLSYNTRGTMDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H FQ F V+ + GEPCL CG MI + + + R ++C CQ+ Sbjct: 219 DVHHG----ALFQ--FKVFHRAGEPCL-RCGLMIEKTMISSRPFYWCPNCQR 263 >gi|51247249|pdb|1Q3C|A Chain A, Crystal Structure Of The Dna Repair Enzyme Endonuclease- Viii (Nei) From E. Coli: The E2a Mutant At 2.3 Resolution Length = 262 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 110/290 (37%), Gaps = 32/290 (11%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 P PE+ NL +K +TD+ L+ + + G+ + V R K LL Sbjct: 1 PAGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKALL 55 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +L++ H + G + + T + PQ V + +D Sbjct: 56 THFSNDLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD--- 107 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVA 178 ++++ +P L+ +GP+ D + + + +N LL+Q +A Sbjct: 108 ---IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLA 164 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 GLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATRG 213 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 214 QVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 261 >gi|332670040|ref|YP_004453048.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] gi|332339078|gb|AEE45661.1| DNA-formamidopyrimidine glycosylase [Cellulomonas fimi ATCC 484] Length = 296 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 30/299 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE + L + V+ + + F P A G ++DV+R K Sbjct: 1 MPELPEVEALAGFLRGRAVDHAVSGVEVGAISALKTFRPPPD---ALVGAVVVDVTRHGK 57 Query: 59 YLLI----ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYR 113 +L + L ++ HL +G +P++ + + + L + + + Sbjct: 58 WLDLMVATATGEPLHLVWHLSRAGWVRWTDQLSDRPVRPGKSPIALRVRLDDGSG---FD 114 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + R+ + +V + P + TLG EP + F LT +N +K L + Sbjct: 115 LTEAGTRKRLAVHVV--AEPTDVPQVATLGVEPLSDEFTQDRLTELLAARNQQVKGLLRD 172 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +AGIGN Y E L A++SP TRS D L I++VL +A++A Sbjct: 173 QGTIAGIGNAYSDEILHAARMSPFAPTRSFD------ADRTATLYAAIRQVLTEAVEAAS 226 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL----SNCGQMIRRIVQAGRSTFYCTYCQ 288 + V+G+TGE C CG + + A S YC CQ Sbjct: 227 GRP-----AAELKDAKRRGMRVHGRTGEACPGWDGVPCGDTVHEVSFADSSLQYCPTCQ 280 >gi|333010176|gb|EGK29611.1| endonuclease VIII [Shigella flexneri K-272] gi|333021133|gb|EGK40390.1| endonuclease VIII [Shigella flexneri K-227] Length = 263 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T + PQ V + +D Sbjct: 56 LTHFPNGLTLYSHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N D L + EI + + R Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GE C CG +I + + ++C CQ Sbjct: 214 GQVDENKHHGAL-FRFKVFHRDGELC-ERCGGIIEKTTLSSCPFYWCPGCQ 262 >gi|119194501|ref|XP_001247854.1| hypothetical protein CIMG_01625 [Coccidioides immitis RS] Length = 416 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 41/310 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + TV+ + +L F F +G KII ++ Sbjct: 1 MPELAEVARIVHFIRKELVGKTVSSAVANHDDLIFGKVGTSAQEFQKTMQGNKIIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH---------TSCAKPIKNPQHNHVTISLTNNT 107 KY + + ++H GM+G I+ P+ + + ++ Sbjct: 61 GKYFWMIMSKPPHPVMHFGMTGWLNIKGVNGCHYRAKEEEDDGPWPPKFWKFQLVMDDD- 119 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKK 163 KK + D RR G + LV+ + + PL+ GP+P + +L KK Sbjct: 120 --KKTEAAFVDARRLGRVRLVDCPGEEIRSHTPLKENGPDPVIDKGIVTESWLKSIVSKK 177 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 +K LL+Q I++G+GN E L+ +++ P + + +L + + +L I Sbjct: 178 KVPIKALLLDQSIISGLGNWMADEVLYHSQIHPEQTSNTLDDSQ------IRELNSAIHY 231 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK----TGEPCLSNCGQMIRRIVQAGR 279 V ++D G S R F + ++ + EP G + I GR Sbjct: 232 VCATSVDLLGDSAR-----------FPADWLMHHRWNKGKKEPSKMLNGDPVTFITVGGR 280 Query: 280 STFYCTYCQK 289 ++ QK Sbjct: 281 TSAIVPAVQK 290 >gi|308069320|ref|YP_003870925.1| formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] gi|305858599|gb|ADM70387.1| Formamidopyrimidine-DNA glycosylase [Paenibacillus polymyxa E681] Length = 272 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVKVSREKSINTEVETFEKQLLGTTVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L G ++ + ++ + ++ + R Sbjct: 61 IFHLNTG----------GRLVLHLMLGGLLFLGTEEQRPDRTVQIELDFSGVKLYFIGLR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G++ L+ + L LGP+P D T + + LK L+NQ+I +GI Sbjct: 111 -LGYLHLLTAKETEE--ALSDLGPDPLDRRMTLEKFTARLKGRRGILKTTLVNQQIFSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A +P K ++++Q + + KL Q VL +A GG + Sbjct: 168 GNCYSDEIAYIAGFTPGSKVQNIVQ----SPEKVEKLYHATQSVLREATAEGGYMEMPLM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GE S G I R+ AG+ FYC Q Sbjct: 224 EGDTLTGGFDHQCRVYDREGEESPS--GGKIVRVELAGKKAFYCPVQQ 269 >gi|226360505|ref|YP_002778283.1| DNA glycosylase [Rhodococcus opacus B4] gi|226238990|dbj|BAH49338.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 265 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 105/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVRVLSPQGRF---AEDAALVDGRVLVKSEAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G+F + A P V + + D R Sbjct: 58 YESGLVVHVHLGLYGAF-----TEAAVPMEPPVGQVRMRMVGAEFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + + + L++Q ++AG+GN+ Sbjct: 106 ACEVLHPPQVAAIE--ARLGPDPLRKDADPDKAWKRISASKTPIGALLMDQAVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R L + D L ++ ++ + G + Sbjct: 164 YRAEVLFRHGIDPARPGRGLSR------DEWDALWADLVALMKVGVRRGRMHVVRPEDDH 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG + V GR+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RICGTPVAHAVMKGRNLFWCPSCQ 263 >gi|205374796|ref|ZP_03227589.1| endonuclease VIII [Bacillus coahuilensis m4-4] Length = 273 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 35/298 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP--HHFSAATRGKKIIDVSRRAK 58 MPE PE+ + +K T+ + + F FP F RG I V + K Sbjct: 1 MPEGPEIRRAADQVEKAIKGRTIEE-------MYFAFPHLEEFEELFRGATCIRVDTKGK 53 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +LI L+ +I H + G + + P+ N V + + + N KK ++Y+ Sbjct: 54 AMLIRLDNGYTIYSHNQLYGRWYSRNV-----YNYPKTNRV-LRMAIH-NEKKSALLYSA 106 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQK 175 +D++ +P ++ +GP+ A L +FH+K LL+Q Sbjct: 107 SD----IDVLRNEEVENHPFIKKVGPDILSERVTAEELVERFHQKRFYRRMWSGLLLDQA 162 Query: 176 IVAGIGNIYVCEALWRAKLSPI-RKT-RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +AGIGN E L+ A++ P R SL Q + ++ ++Q + G Sbjct: 163 FIAGIGNYLRSEILYMARIHPTLRPVDCSLSQLESLAESTIHLMVQSYKMG-------GI 215 Query: 234 SSLRDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ + V G ++ V+ + GE C CG+ I +++ A R +YC YCQ+ Sbjct: 216 TNNLELVERLKKQGVKRSKYRHWVFNREGESCF-QCGREIEKMMAASRRAYYCPYCQR 272 >gi|88807777|ref|ZP_01123288.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] gi|88787816|gb|EAR18972.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. WH 7805] Length = 200 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 18/215 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F T +H V + N + + + + D R FG M V ++ Sbjct: 1 MTGQFQWHPTQTD----PCRHTRVRL-----WNEQGHELRFVDMRSFGEMWFVPQNVPID 51 Query: 136 --YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 L+ LGPEP FNA YL + +K ALL+Q +VAG GNIY E+L+ + Sbjct: 52 SVITGLQRLGPEPFSEEFNATYLQQKLRGSTRTIKAALLDQAVVAGAGNIYADESLFASG 111 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 ++P RK L L +L + VL +I AGG++ D+ ++G G + Sbjct: 112 IAPHRKAGELRLAE------LERLCISLVHVLEISIGAGGTTFSDFRDLEGVNGNYGGQA 165 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 SVY +TG+PCL CG I R GRS+ +C+ CQ Sbjct: 166 SVYRRTGQPCL-VCGNPIERKRLGGRSSHWCSECQ 199 >gi|308186065|ref|YP_003930196.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] gi|308056575|gb|ADO08747.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Pantoea vagans C9-1] Length = 262 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 109/291 (37%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + +T+ L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRVADKLEAAIVGQPLTEAWFAFPQLK-----TYEPSLIGEQVQAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVKPDTELNTT----RQLRVRL---ATAGKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ ++ N + + + LL+Q + Sbjct: 109 ----IELLNADTLAAHPFLTRIGPDVLNSQLNVEEVKERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P + + L D L + + V A G+ + Sbjct: 165 AGLGNYLRAEILWLAQLLPNHRAQDLSD------DQLTAFSEALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + FQ F V+ + G+ C CG +I + + R ++C CQ Sbjct: 219 YH-----EEAAFQ--FEVFHRQGKKC-RRCGTVIEKGTLSSRPFYWCPGCQ 261 >gi|296807993|ref|XP_002844335.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] gi|238843818|gb|EEQ33480.1| formamidopyrimidine-DNA glycosylase lyase mutM [Arthroderma otae CBS 113480] Length = 392 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 117/313 (37%), Gaps = 44/313 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F +GK +I ++ Sbjct: 1 MPELAEVARIVNYIRKHLVGHTIAKVVANHDDLLFGKVGTSAEEFKKHMQGKTVIGTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKNENFEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAIVTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN E L+ A++ P + + +L N T +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGDEILYHARIHPEQYSDTLRDNQIT------ELHSAI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSN-----CGQMIRRIVQ 276 V ++D + G F + + + G+ G+ I + Sbjct: 232 NYVCSVSVD-----------LKGESSDFPTDWLFHHRWGKGKKGAAGKLPSGEAIVFVTV 280 Query: 277 AGRSTFYCTYCQK 289 GR++ QK Sbjct: 281 GGRTSAVVPSVQK 293 >gi|320010811|gb|ADW05661.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Streptomyces flavogriseus ATCC 33331] Length = 273 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + +F +A G+ + V K+L + Sbjct: 1 MPEGHTIHRLAADHHERFAGRPVRVSSPQGKFSDS---AALLDGRVLTGVDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG+ + +HLG+ G P + V + L N+++ D R Sbjct: 58 FEGSAWVHIHLGLFGKLGFGTVPAPPPT-----DTVRLRLLNDSHH-------ADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + L++QK+VAG+GN+ Sbjct: 106 TCALITGPEKRAIHD--RLGPDPLRADEDGERAWLRIARSRVTVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R + L + D+ + + ++ ID + L + + Sbjct: 164 YRAEVLFRHGIDPYRAGKDLTRAEWDAIWADLGVLMREGVRNNRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + + C CG IR A R+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRARQAC-HICGTEIRTADLAARNLFWCPACQ 267 >gi|256787746|ref|ZP_05526177.1| DNA repair hydrolase (fragment) [Streptomyces lividans TK24] gi|289771633|ref|ZP_06531011.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] gi|289701832|gb|EFD69261.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces lividans TK24] Length = 280 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 103/299 (34%), Gaps = 33/299 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R T + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAQDCTAAFARTAVRVTSPQGKFADS---AALLDGTVLTTADAHGKHLFLG 57 Query: 64 LE-----------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + +HLG+ G P + V + L N+T Sbjct: 58 FGAAGNAAEDAAENPAWVHIHLGLFGKVAFGPVPAPPPT-----DTVRLRLANDTAHV-- 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D R L+ K LGP+P + + + + + L+ Sbjct: 111 -----DLRGPTTCALITDPEKRAIHD--RLGPDPLRPDADPAAAHRRISRSRTTIAALLM 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG--TPKDILYKLIQEIQKVLIDAID 230 +QK++AG+GN+Y E L+R + P R + L +D+ + + ++ ID + Sbjct: 164 DQKVIAGVGNVYRAEVLFRHGIDPYRPGKDLTPAEWDTIWQDLTALMREGVRNNRIDTVR 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY + +PC CG I A R+ F+C CQK Sbjct: 224 PEHTP--EAMGRPPRVDDHGGEVYVYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|126436180|ref|YP_001071871.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] gi|126235980|gb|ABN99380.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. JLS] Length = 268 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 109/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G+ S K+L Sbjct: 1 MPEGHTLHRLARLHQKRYKGQRVRVSSPQGRF---AEGAAMVDGRTFTGASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G I VHLG+ G F S P +P V + + + + D R Sbjct: 58 YRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRMRMVGDGHG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++V+ + L LGP+P + + ++ + L++Q ++AG+GN+ Sbjct: 110 ACEIVDEAQVSDI--LARLGPDPLRRDADPAPAWTRLNRSRRPVGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R +L + ++ +++ + G Sbjct: 168 YRSELLYRHRIDPYRLGTNLEPGEFD------AMWTDLVELMKVGVRRGKIVTVRPEDDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + EPC CG + V GR+ F+C CQ+ Sbjct: 222 GAPSYRTGRPRTYVYRRALEPC-RICGTPVNTAVLEGRNLFWCPTCQR 268 >gi|34015259|gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group] gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza sativa Japonica Group] Length = 405 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 108/292 (36%), Gaps = 28/292 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE+ RR L + D P AA G+ I R+ K Sbjct: 1 MPELPEVEVARRALEEHCVGKRIVRCSAADDTKVIDGVAPPRLEAALVGRTISAARRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 L + L+ G + + + + H + D Sbjct: 61 NLWLALDSPPFPSFQFG-----FLLYRMPIRNGWSYLHQGCGTE-QIQKMDDGLEFSFTD 114 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 RRF + ++ PP+ LGP+ + +K + +K LL+Q ++ Sbjct: 115 KRRFAKIRFLDNPE--AVPPISELGPDALFEPLHLDDFVESLSRKKAPIKALLLDQSFIS 172 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGN E L++A++ P++ + K+ L Q I +V+ +++ G +S + Sbjct: 173 GIGNWIADEVLYQARIHPMQTASMIS------KEKCKALHQCIIEVIEKSLEVGCNSSQ- 225 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLS-NCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + +P + G+ I I GR++ Y QK Sbjct: 226 ----------YPENWIFHSREKKPGKAFVEGKKIDFITVGGRTSAYVPELQK 267 >gi|21221083|ref|NP_626862.1| DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] gi|20520840|emb|CAC10002.2| putative DNA repair hydrolase (fragment) [Streptomyces coelicolor A3(2)] Length = 280 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 103/299 (34%), Gaps = 33/299 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R T + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAQDCTAAFARTAVRVTSPQGKFADS---AALLDGTVLTTADAHGKHLFLG 57 Query: 64 LE-----------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 + +HLG+ G P + V + L N+T Sbjct: 58 FGAAGNAAEDAAENPAWVHIHLGLFGKVAFGPVPAPPPT-----DTVRLRLANDTAHV-- 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL 172 D R L+ K LGP+P + + + + + L+ Sbjct: 111 -----DLRGPTTCALITDPEKRAIHD--RLGPDPLRPDADPAAAHRRISRSRTAIAALLM 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG--TPKDILYKLIQEIQKVLIDAID 230 +QK++AG+GN+Y E L+R + P R + L +D+ + + ++ ID + Sbjct: 164 DQKVIAGVGNVYRAEVLFRHGIDPYRPGKDLTPAEWDTIWQDLTALMREGVRNNRIDTVR 223 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + + VY + +PC CG I A R+ F+C CQK Sbjct: 224 PEHTP--EAMGRPPRVDDHGGEVYVYRRANQPC-HLCGGPISTAGLAARNLFWCPTCQK 279 >gi|320008179|gb|ADW03029.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces flavogriseus ATCC 33331] Length = 268 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 29/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P +A G+ ++D + R K+L Sbjct: 1 MPEGDTVFQTAKRLDSALAGGVLTVSDLR-------VPRFATADLTGRTVLDATARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + P H + T YR+ Sbjct: 54 LTRFEGGLTLHSHLRMEGAWRVFDHG-ERWRGGPDHQIRAVLATAEHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T + Q + LGP+ ++ L + + +ALL+Q+ +AG Sbjct: 107 --PVLELLRTEDEEQV--VGHLGPDLLGPDWDPETALRNLLADPGRRVGDALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-LIQEIQKVLIDAIDAGGSSLRD 238 +GN+Y+CE + A+ +P L T K L+ + + A ++ Sbjct: 163 VGNVYMCELCFMARATPWLPVGELSLPLATRLVSTAKQLLDANRDRPVRTTTAATPAMSR 222 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VYG+ G PCL C IR+ V+ R T++C CQ Sbjct: 223 RL--------PRERLFVYGRVGRPCL-RCRTPIRKTVRDDRPTYWCPRCQ 263 >gi|254821431|ref|ZP_05226432.1| hypothetical protein MintA_15951 [Mycobacterium intracellulare ATCC 13950] Length = 268 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 109/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGAPVSVSSPQGRF---ADAAAAVDGRVLQRTSAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F E V + + D R Sbjct: 58 YAGGPIVHVHLGLYGAFT-EWERPDDGSFPEAVGQVRMRMIGADYG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDEGQVSDV--LARLGPDPLRGDADPSWAWKRIAKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + ++ ++ ++ + G + H Sbjct: 168 YRSELLYRHGIDPFRPGRDVGEDEFDAA------WIDLVALMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY ++GEPC C IR V GR+ F+C CQK Sbjct: 222 GAPSYRPDRPRTYVYRRSGEPC-RVCKAPIRTTVLEGRNVFWCPTCQK 268 >gi|295703014|ref|YP_003596089.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] gi|294800673|gb|ADF37739.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] Length = 272 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 114/295 (38%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + ++ V++I F H+ G +I V + K + Sbjct: 1 MPEGPEIRRAADEVEKAIISLPVSEIWFA-----FPSLQHYEEVLTGARIKRVDTKGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +I H + G + + + + +++ N KK ++Y+ Sbjct: 56 LIRFDNGYTIYSHNQLYGKWYVRSSYNYPSTN----RQLRLAIHNE---KKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 ++++ +P + +GP+ A L +F+ K + LL+Q + Sbjct: 109 ----IEVLRDEEVSAHPFVSRVGPDILSEEVTADELLDRFYSKPFYRRKWASLLLDQSFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A ++P + + L K + ++ + + GG + Sbjct: 165 AGIGNYLRSEILFVAGINPASRPVDCTEEQ------LKKAAEATISLVKQSYETGGITND 218 Query: 238 -DYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G ++ V+ + GE C G I ++ A R +YC CQK Sbjct: 219 VKLAETLKKKGQKRSEYRHWVFNREGEAC-RIDGTPILKVQAASRRLYYCPTCQK 272 >gi|307328464|ref|ZP_07607639.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885876|gb|EFN16887.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 269 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R ++ + +F + G+ + K+L ++ Sbjct: 1 MPEGHTIHRLAADHLETFGGRPVRATSPQGKF---ADGAGLIDGQPLHHAEAHGKHLFLD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G++ + V + L N Y D R Sbjct: 58 FAATGWVHVHLGLFGTYAFGPAPAPPAT-----DTVRLRLANPEG-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + ++ L++QK+++G+GN+ Sbjct: 106 ACALITDGEKQAIHD--RLGPDPLRPADDGERAWTRISRSRVSVAALLMDQKVISGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R+L + D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRPGRALTRAEWDAIWADLVALMREGVRNNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G+PC CG IR A R+ F+C CQ+ Sbjct: 222 RPPRVDDHGGEVYVYRRAGQPC-HVCGGEIRTADLAARNLFWCPDCQR 268 >gi|296270386|ref|YP_003653018.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296093173|gb|ADG89125.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 269 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 104/292 (35%), Gaps = 30/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE II R ++ + + +F +A G+++ K+L + Sbjct: 1 MPEGHIIHRLAAEYARSFAGGPVAVSSPQGKFSDS---AALLDGQRMHGTDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P+ V + L + D R Sbjct: 58 FGPLGWVRIHLGLYGKVTFGDDPAPAPVGA-----VRLRLAGGG-------RWADLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ K LGP+P + + + + + + LL+Q+++AG+GN+ Sbjct: 106 ACELITDEEKRAVH--ARLGPDPLRDGDDPERAWARISRSRAPIAALLLDQRVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R L + L ++ ++ + G H Sbjct: 164 YRAEVLFRHGIDPYRPGCELTRAE------WEALWSDLAGLMRQGVANGRIDTVRPEHTP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + G PC CG IR R+ ++C CQ+ Sbjct: 218 EAMGRPPRVDDHGGEVYVYRRAGSPC-HVCGAEIRTAELESRNLYWCPACQR 268 >gi|108800564|ref|YP_640761.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119869703|ref|YP_939655.1| formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] gi|108770983|gb|ABG09705.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. MCS] gi|119695792|gb|ABL92865.1| Formamidopyrimidine-DNA glycolase [Mycobacterium sp. KMS] Length = 268 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 108/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G+ S K+L Sbjct: 1 MPEGHTLHRLARLHQKRYKGQRVRVSSPQGRF---AEGAAMVDGRTFTGASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G I VHLG+ G F S P +P V + + + D R Sbjct: 58 YRGGRIIHVHLGLYGRFDEFAVSADDPPPDPV-GQVRMRMVGAGHG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++V+ + L LGP+P + + ++ + L++Q ++AG+GN+ Sbjct: 110 ACEIVDEAQVSDI--LARLGPDPLRRDADPAPAWTRLNRSRRPVGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R +L + ++ +++ + G Sbjct: 168 YRSELLYRHRIDPYRLGTNLEPGEFD------AMWTDLVELMKVGVRRGKIVTVRPEDDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + EPC CG + V GR+ F+C CQ+ Sbjct: 222 GAPSYRTGRPRTYVYRRALEPC-RICGTPVNTAVLEGRNLFWCPTCQR 268 >gi|294497645|ref|YP_003561345.1| endonuclease VIII [Bacillus megaterium QM B1551] gi|294347582|gb|ADE67911.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium QM B1551] Length = 272 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 115/296 (38%), Gaps = 31/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + ++ V +I F H+ G +I V + K + Sbjct: 1 MPEGPEIRRAADEVEKAIISLPVREIWFA-----FPSLQHYEEVLTGARIKRVDTKGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +I H + G + + + + +++ N KK ++Y+ Sbjct: 56 LIRFDNGYTIYSHNQLYGKWYVRSSYNYPSTN----RQLRLAIHNE---KKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 ++++ +P + +GP+ A L +F+ K + LL+Q + Sbjct: 109 ----IEVLRDEEVSAHPFVSRVGPDTLSEEVTADELLDRFYSKPFYRRKWASLLLDQSFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS-- 235 AGIGN E L+ A ++P + + L K + ++ + + GG + Sbjct: 165 AGIGNYLRSEILFVAGINPAARPVDCTEEQ------LKKAAEATISLVKQSYETGGITND 218 Query: 236 --LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L + + G Q V+ + GE C G I ++ A R +YC CQK Sbjct: 219 VKLAETLKKKGQK-RSQYRHWVFNREGEAC-RIDGTPILKVQAASRRLYYCPTCQK 272 >gi|253687624|ref|YP_003016814.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645859|sp|C6DCC8|END8_PECCP RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|251754202|gb|ACT12278.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 263 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + A G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELK-----PYEAELVGQQVRQIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + V + N ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETK--RDLRVRLETQNRAI-----LLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIV 177 ++++ +P L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLTPEALTTHPFLQRIGPDVLDLSLTPEQVYERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L Q + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSQALLEIPRLSYNTRGT--V 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 DENHHHGAI----FSFKVFHRDGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|310642365|ref|YP_003947123.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] gi|309247315|gb|ADO56882.1| DNA-(Apurinic or apyrimidinic site) lyase [Paenibacillus polymyxa SC2] Length = 272 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 19/288 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPE+E R L + ++ +T + + R+ F G ++ + RR K+L Sbjct: 1 MPELPEMENYRILLSKQILDIPITGVTVSREKSINTEVETFKKQLLGATVVYLERRGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L ++ + ++ + ++ + R Sbjct: 61 IFHLNTGK----------RLVLHLMLGGLLYLGTEEQRPDRTIQIELDFSGVKLYFIGLR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G++ L+ + L LGP+P D T + + LK L+NQ++ +GI Sbjct: 111 -LGYLHLLTAKETDE--ALSDLGPDPLDRRMTLENFTARLKGRRGILKTTLVNQQVFSGI 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + A +P K ++++Q + + KL Q VL +A GG + Sbjct: 168 GNCYSDEIAYIAGFTPGSKVQNIVQ----SPEKVEKLYHATQSVLREATAEGGYMEMPLM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F + VY + GE S G I R+ AG+ FYC Q Sbjct: 224 EGDTLTGGFDHQCRVYDREGEESPS--GGKIVRVELAGKKAFYCPVQQ 269 >gi|291303611|ref|YP_003514889.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] gi|290572831|gb|ADD45796.1| DNA-(apurinic or apyrimidinic site) lyase [Stackebrandtia nassauensis DSM 44728] Length = 269 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 106/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R T + + RF + G + K L +E Sbjct: 1 MPEGHVIHRLADRYATAFTGGPLAVSSPQGRFADS---AKRLDGLSMTGTEAHGKQLFLE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG I +HLG+ G V + L Y+D R Sbjct: 58 FEGQQWIRIHLGIYGKVAFGEPPAPAVEGA-----VRLRLEGER-------AYSDLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ K +GP+P + + ++ L++Q IV+G+GNI Sbjct: 106 VCELIGPDEKQAVHD--RIGPDPLRADADPDAAWRLISRSKRDIGTLLMDQAIVSGVGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P+R ++ + D++ + + ++ ID + A L + + Sbjct: 164 YRAEVLFRHGIDPMRPGTAMTEAEWDAVWADLVELMREGVKLGRIDTVRA--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G+PCL CG + GR+ F+C CQ Sbjct: 222 REPRVDRHGGEVYVYRRDGKPCL-VCGTAVAIAKHQGRNLFWCPSCQ 267 >gi|304395701|ref|ZP_07377584.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] gi|304356995|gb|EFM21359.1| DNA-(apurinic or apyrimidinic site) lyase [Pantoea sp. aB] Length = 262 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 110/292 (37%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + +T+ L+ + + G+++ + R K L Sbjct: 1 MPEGPEIRRVADKLEAAIVGEPLTEAWFAFPQLK-----TYEPSLIGEQVQAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I + + L K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIVKPDTELNTT----RQLRVRL---ATKGKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L+ +P L +GP+ +++ + + + LL+Q + Sbjct: 109 ----IELLNADTLAAHPFLTRIGPDVLNSALTVEEVRERLLSPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L P + + L D L + + V A G+ + Sbjct: 165 AGLGNYLRAEILWLAQLLPNHRAQDLSD------DQLTAFSEALLSVPRHAYRMRGTMKK 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + FQ F V+ + G+ C CG +I + + R ++C CQ+ Sbjct: 219 YH-----EEAAFQ--FEVFHRQGKQC-RRCGTVIEKGTLSSRPFYWCPGCQR 262 >gi|325676024|ref|ZP_08155707.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|325553262|gb|EGD22941.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 265 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 104/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGSPVRVSSPQGRF---AEDAALIDGRVLVRSDAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G F P+ V + + D R Sbjct: 58 YENGLVVHVHLGLYGKFTESPLPLEPPV-----GQVRMRMAGTEFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 106 ACEVLHEPQVAAIE--ARLGPDPLRADADPDRAWARISKSQTPIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R +++ + + ++ ++ + G + Sbjct: 164 YRAEILFRHGIHPERPGKNVSRAEFD------AMWADLVDLMNVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ Y + G C CG I +V GR+ F+C CQ Sbjct: 218 GDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHVVMKGRNLFWCPGCQ 263 >gi|54023295|ref|YP_117537.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] gi|54014803|dbj|BAD56173.1| putative formamidopyrimidine-DNA glycosylase [Nocardia farcinica IFM 10152] Length = 265 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G+ + K+LL Sbjct: 1 MPEGHTLHRLAERHQRVFAGGPVRVSSPQGRF---AEGAALVDGRVLARCEAHGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + VHLG+ G F P+ V + + T D R Sbjct: 58 YEHGPVVHVHLGLYGKFYDAPVPMGPPVGE-----VRMRMVGATEG-------TDLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ L LGP+P + + + + L++Q+++AG+GN+ Sbjct: 106 ACEVLTPPEVDA--LLERLGPDPLRADADPDRAWQRIRRSRRPIGALLMDQRVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R L + ++ ++ ++ G + H Sbjct: 164 YRAEVLFRHGISPYRPGVDLDAAE------WKAIWADLVDLMPIGVETGRMHVVRPEHDH 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + G C CG I V GR+ F+C CQ Sbjct: 218 GEPSYAPDRPRTYVYRRPGAGC-RVCGSPIAHAVLDGRNLFWCPTCQ 263 >gi|282866719|ref|ZP_06275759.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] gi|282558418|gb|EFB63980.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces sp. ACTE] Length = 269 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 107/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + +F +A G+ + D K+L + Sbjct: 1 MPEGHTIHRLAADHRARFAGSPVRVSSPQRKF---AESAARLDGRVLTDTDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + +HLG+ G T P V + L N ++ Y D R Sbjct: 58 FDGPEWVHIHLGLFGKLGFGTTPAPPPTDT-----VRLRLVNASD-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + L++QK+VAG+GN+ Sbjct: 106 TCALITEDEKRAIH--ARLGPDPLREDEDGERAWLRISRSRVTVAALLMDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R + L ++ D+ + + ++ ID + L + + Sbjct: 164 YRAEVLFRHGIDPYRPGKDLTRSEWDAIWADLGALMREGVRNNRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + + C C IR A R+ F+C CQ+ Sbjct: 222 RPARVDDHGGEVYVYRRARQAC-HICATEIRTADLAARNLFWCPACQR 268 >gi|254515713|ref|ZP_05127773.1| endonuclease VIII [gamma proteobacterium NOR5-3] gi|219675435|gb|EED31801.1| endonuclease VIII [gamma proteobacterium NOR5-3] Length = 274 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 114/294 (38%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + T+ ++ F F G++++D+ R K L Sbjct: 1 MPEGPEIRRAADRIADVLVDRTIEEVVFA-----FPELQRFGGLLTGQQVLDIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +I H + G + I AK K P N + +D Sbjct: 56 LTHFDNDYAIYSHNQLYGVWKI-----AKRGKMPATNRSLRLALHTATHSALLYSASDIS 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + +L +P L TLGP+ + + ++ + +L L+Q + Sbjct: 111 VWAREEL------GMHPFLATLGPDLLSANLSWQDISERLQMPRFAGRSLSALYLDQHFM 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GN E L+ A L P R+ R L + L +E K+ + + GG +L Sbjct: 165 AGSGNYLRSEILFCAGLHPRRRPRDLTRAQRG------ALARETLKLPRRSYETGGITLP 218 Query: 238 DYVHI---DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ + F V+G+ G PC CG I R R ++C CQ Sbjct: 219 VRLAASLKKTVKGFERRRFFVFGRDGRPCY-QCGDTILRDSMGSRRIYWCPTCQ 271 >gi|284040426|ref|YP_003390356.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] gi|283819719|gb|ADB41557.1| DNA-formamidopyrimidine glycosylase [Spirosoma linguale DSM 74] Length = 271 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 114/289 (39%), Gaps = 21/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R+ L V+ I + K L A G++ R K L Sbjct: 1 MPELPEVEIRRQYLETSSLYQPVSHIEVEDKKLLTTDLATLQQALIGRQFTGTRRVGKNL 60 Query: 61 LIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 I + ++ I +H GM+G H S + P+ + T+ + + + P Sbjct: 61 FIFTDAPDVIIHMHFGMTGDLEYYHASLDR----PRFARIVFEFTSG-----FNLGFLCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F + LV + + +G + D S L+ + +K + +K LL+Q +VAG Sbjct: 112 RKFERVGLVTD--VDAFLLRKKIGEDGLDISL--ETLSDRVRRKKAFIKPVLLDQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN V E L++A + P ++ +L + I +L+ E + Sbjct: 168 LGNWIVDEVLFQALIHPEQRADTLTNDQMASLHIAIRLVLETAIRYEATYRDFPIGFLIH 227 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V Y Y C I R V GR+TF+C Q Sbjct: 228 VREWDDSPYDDVEAHKY-------CPRCKTRIERSVVGGRTTFFCPKEQ 269 >gi|302545408|ref|ZP_07297750.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302463026|gb|EFL26119.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 270 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 107/288 (37%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R ++ + +F +A G+ + K+L ++ Sbjct: 2 MPEGHTIHRLAADHLERFGGRPVRATSPQGKF---ADGAALVDGQVLQHAEAHGKHLFLD 58 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G + P + V + L Y D R Sbjct: 59 FAATGWVHVHLGLFGKYTFGPAPAPPPTET-----VRLRLAGPGG-------YADLRGPT 106 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + ++ L++QKIVAG+GN+ Sbjct: 107 ACALITDPEKQAIHD--RLGPDPLRPDDDGDGAWTRISRSRVSVAALLMDQKIVAGVGNV 164 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R+L + D+ + + ++ ID + + + + Sbjct: 165 YRAEVLFRHGIDPYRPGRALARAEWDAIWSDLAELMREGVRNNRIDTVRPEHTP--EAMG 222 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G+PCL C IR A R+ F+C CQ+ Sbjct: 223 RPPRVDDHGGEVYVYRRAGQPCL-VCDGEIRTAGLAARNLFWCPACQQ 269 >gi|120405005|ref|YP_954834.1| formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] gi|119957823|gb|ABM14828.1| Formamidopyrimidine-DNA glycolase [Mycobacterium vanbaalenii PYR-1] Length = 268 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +AA G S K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRFV---DGAAAVNGHVFKKASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ G+F + P V + + D R Sbjct: 58 YQGGRVVHVHLGLYGTFTEWPLPDDRTQPIPV-GQVRMRMLGAEYG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++E + LGP+P + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIEEPDVADV--VARLGPDPLRSDADPELAWRRISKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R ++ D ++ ++ ++ + G + H Sbjct: 168 YRSELLFRHRTDPFRPGTTVT------SDEFAEMWTDLVALMKVGVRRGKIVVVAPEHDH 221 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C IR + GR+ F+C CQ Sbjct: 222 GAPSYREGRPRTYVYRRAGDPC-RVCATPIRTVELEGRNLFWCPACQ 267 >gi|312140366|ref|YP_004007702.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|311889705|emb|CBH49022.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] Length = 265 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 103/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGSPVRVSSPQGRF---AEDAALIDGRVLVRSDAWGKHLWHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E L + VHLG+ G F P+ V + + D R Sbjct: 58 YENGLVVHVHLGLYGKFTESPLPLEPPV-----GQVRMRMAGTEFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 106 ACEVLHEPQVAAIE--ARLGPDPLRADADPDRAWARISKSQTPIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R +++ + + ++ ++ + G + Sbjct: 164 YRAEILFRHGIHPERPGKNVSRAEFD------AMWADLVDLMNVGVRRGKMHVVRPEDDH 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ Y + G C CG I V GR+ F+C CQ Sbjct: 218 GDPSYAKDRPRTYTYRRAGSAC-RICGTPIAHAVMKGRNLFWCPGCQ 263 >gi|296268041|ref|YP_003650673.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296090828|gb|ADG86780.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 292 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 118/295 (40%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD---ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE + L TV + + P AA G+ I V R Sbjct: 1 MPELPEVEALAAFLRARAGGRTVAGADVVAVQALKTVNPPP----AALVGRAITGVHRHG 56 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHT----SCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+L +E E L ++ HLG SG A+ + P V +S + Sbjct: 57 KFLDLECE-GLHLVAHLGRSGRLRWRDDLTGARPARSGRGPLAARVRLSPDPEGRAPGFE 115 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + PR+ + +V + P + LG +P + F L + +K L + Sbjct: 116 LHEAGPRKRLALYVVHDPAE--VPGIAGLGIDPLSDGFTVARLREIVRAGCTQVKGLLRD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++++GIG+ Y E L A+LSP + SL D + L I VL +A+ Sbjct: 174 QRLISGIGDAYSDEILHAARLSPFKLADSLTD------DQVAALHSAIVTVLGEAVAEAR 227 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + V+G+TGE C + CG IR + A + YC CQ Sbjct: 228 ALAAERPEPHPRL-----RMRVHGRTGEACHA-CGDTIREVSFADSALQYCPTCQ 276 >gi|29831970|ref|NP_826604.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29609087|dbj|BAC73139.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 269 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 105/288 (36%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLADDYEARFGGAAARVTSPQGKF---ADAAALLDGTVLETADAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 I +HLG+ G P + V + L N+T+ Y D R Sbjct: 58 FRRADWIHIHLGLFGKVGFGDAPAPPPT-----DTVRLRLANDTS-------YVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + +++ L++QK++AG+GN+ Sbjct: 106 TCALITDGEKRAIHD--RLGPDPLRPDADPARAYDRVSRSRTSVAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRTGRELTRREWDAIWADLVALMREGVRNNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 222 RPPRVDDHGGEVYVYRRANLPC-HICGGEIRTAGLAARNLFWCPTCQQ 268 >gi|293397240|ref|ZP_06641513.1| endonuclease 8 [Serratia odorifera DSM 4582] gi|291420260|gb|EFE93516.1| endonuclease 8 [Serratia odorifera DSM 4582] Length = 263 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ +L + +T++ LR P G++I+ + R K L Sbjct: 1 MPEGPEIRRAADSLAAAVLEQPLTEVWFAFAQLRHYQPE-----LIGQRIVAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + K + V + ++ ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWKVAKAGETPTTK--RDLRVRL-----QTAQQAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L +P L+ +GP+ D + +T + L LL+Q + Sbjct: 109 ----ITLGPREEIAMHPFLQRIGPDVLDMALTQRQVTQRLLAPAFCRRQLGGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW A+L+P + R L D L +L Q I + + G + Sbjct: 165 AGLGNYLRAEILWLAQLAPQHRPRDLS------ADALQRLAQAILALPRLSYQTRGQAND 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D H G++ +F V+ ++GEPCL CG MI + + R ++C CQ Sbjct: 219 DVHH--GAL----FSFKVFHRSGEPCL-RCGAMIVKTTLSSRPFYWCPNCQ 262 >gi|328882456|emb|CCA55695.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 269 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + + +F +A G + K+L + Sbjct: 1 MPEGHTIHRLAVDHRERFGGRSVRVTSPQGKFADS---AALLDGTVLETTEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + +HLG+ G P + V + L N+ + Y D R Sbjct: 58 FTGMGWVHIHLGLFGKVGFGDAPAPPPT-----DTVRLRLANSRS-------YVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ + K LGP+P + + + + L++QK++AG+GN+ Sbjct: 106 TCALITDAEKRAIHD--RLGPDPLREDDDRARAWRRISASRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L +D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTPEEWDALWEDLVLLMREGVRLNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + +PC CG IR A R+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRANQPC-HVCGSEIRTADLAARNLFWCPGCQ 267 >gi|288936498|ref|YP_003440557.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] gi|288891207|gb|ADC59525.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Klebsiella variicola At-22] Length = 263 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 102/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD L + + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGQPLTDAWFAFPQL-----QPYQSLLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + + +K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGEQPASN-------RVLRVRLQTARKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L +GP+ D + + + ++ LL+Q + Sbjct: 109 ----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + I + R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQLDALAHALLAIPRLSYH-----------TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQADDNKHHGAL-FRFKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|326779358|ref|ZP_08238623.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326659691|gb|EGE44537.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 274 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 102/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIRRLADDHAERFAGAPVRVSSPQGKFSDS---AALLDGRTLTATDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N + D R Sbjct: 58 FGDTGWVHIHLGLFGRL-----GFGAAPPPPPTDTVRLRLVNAAHH-------ADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 106 TCALITEPEKRAIH--ERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + + D+ + + ++ ID + L + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRATWDTIWADLGDLMREGVRNNRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 222 RPPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|56962663|ref|YP_174389.1| hypothetical protein ABC0889 [Bacillus clausii KSM-K16] gi|56908901|dbj|BAD63428.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 267 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 123/288 (42%), Gaps = 22/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE+PE+ ++ L + +TD+ ++R+ F AA + + + +VSRR K L Sbjct: 1 MPEMPEMATYQKWLTRTVVGQMITDVEVNREKSINVPVVEFKAAVQHQIVTEVSRRGKQL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L +++HL + G A + V +S + + +Y Sbjct: 61 LFHLANGHMLLLHLMLGGWMYWGTEEDAPD----RTKQVILSFSRHK-------LYFIGL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G++ L + + P L LGPE +S NA K + +K L NQ ++GI Sbjct: 110 RLGYIHLHD--QQSAKPILAKLGPEA--SSINADEFKKIAKHKRTMVKPFLTNQAHLSGI 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E + AK+ P+R SL L L Q I L A DAGG + Sbjct: 166 GNCYADEICYHAKMIPLRTIDSLSSKE------LAALHQAIAPTLQAAADAGGYMSHPFT 219 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G + VY + GE C CG I R + ++ F+C CQ Sbjct: 220 SSDRLTGGMNSKLYVYDREGEACF-RCGNPIIRQEASKKNVFFCQVCQ 266 >gi|322711093|gb|EFZ02667.1| formamidopyrimidine-DNA glycosylase [Metarhizium anisopliae ARSEF 23] Length = 372 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 124/309 (40%), Gaps = 35/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + + F AA RGK+++ + Sbjct: 1 MPEIAEVARIVHFLRLHLVGRKIASASAIDDSNVFGKVGTTGAEVEAALRGKQVVSAGNQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKP------------IKNPQHNHVTISLT 104 KY I L+ +++H GM+G I A P+ + Sbjct: 61 GKYFWITLDKPPHLVMHFGMTGWVHIRGEKTAYTNYYKKMKDSELTTWPPKFWKFHL--- 117 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA--DNSFNAIYLTHQF 160 + V + D RRFG + LV+ ++ PL+ GP+P + F YL + Sbjct: 118 KTEGKPEVEVAFTDARRFGRVRLVDCPGADIRKHTPLKENGPDPVIDTDRFTEEYLRGKM 177 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q +++GIGN E L++AKL P + + S + KL + Sbjct: 178 QARHVPVKALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE------IKKLYES 231 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I+ V A+D G S + H F + + GK L N G+ + I GR+ Sbjct: 232 IRYVCQTAVDKLGDSDQFPEHWL-----FNHRWGKGGKGSSSKLPN-GEKLAFITVGGRT 285 Query: 281 TFYCTYCQK 289 + Y QK Sbjct: 286 SCYAPKVQK 294 >gi|156934788|ref|YP_001438704.1| endonuclease VIII [Cronobacter sakazakii ATCC BAA-894] gi|166920093|sp|A7MQW6|END8_ENTS8 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|156533042|gb|ABU77868.1| hypothetical protein ESA_02628 [Cronobacter sakazakii ATCC BAA-894] Length = 263 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + +T + L+ F A G ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAVAGKPLTHVWFAFPELK-----AFEAQLTGARVERFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + +K + T SL T+ V+ Sbjct: 56 LTHFSCGLTLYSHNQLYGVWRV--------VKAGETPQTTRSLRVRLETEDAAVLLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +++++ + L+ +GP+ D S + + LL+Q + Sbjct: 108 E---IEMLDADGVAAHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K L N T D L + EI ++ R Sbjct: 165 AGLGNYLRVEILWQAQLAPRHKAIEL---NNTQLDALARACLEIPRLSYQ--------TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 214 GTVDENKHHGAL-FRFEVFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|46581658|ref|YP_012466.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|81698981|sp|Q726D5|FPG_DESVH RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|46451081|gb|AAS97726.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. Hildenborough] gi|311235298|gb|ADP88152.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris RCH1] Length = 365 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 18/225 (8%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + L + HL M+G I + I H V L T R+ ++D R+FG+ Sbjct: 159 DTVLGLAFHLKMTGRLFIHPPATPAGI----HTRVVFDLEGGT-----RLFFDDARKFGY 209 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + +P R LGPEP + + ++ +K LL+QK+VAG+GNIY Sbjct: 210 VRCITRRSLALWPFWRDLGPEPLETEARGF--AARLARRRGRIKALLLDQKVVAGVGNIY 267 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E+L+RA + P + +L + L+ L +Q VL ++I GSS+RDY G Sbjct: 268 ADESLFRAGIRPDTQAHTLTP------ERLFALHGHLQDVLRESIAECGSSIRDYRDAHG 321 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN+F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 322 DAGAFQNSFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPQCQR 365 Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKKIIDVSRRA 57 MPELPEVE I L + + + +H P F+ A +G++I DV RR Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLCTPAAFTEAVQGQRIADVGRRG 60 Query: 58 KYLLIELEG 66 K LL+ Sbjct: 61 KLLLVAFAS 69 >gi|330922902|ref|XP_003300019.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] gi|311326034|gb|EFQ91877.1| hypothetical protein PTT_11156 [Pyrenophora teres f. teres 0-1] Length = 424 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 40/309 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + L + T+ + + + F A GKK++D ++ Sbjct: 1 MPEIAEVARVVHFLKKHIVGKTINIVTAQDDPIIYGKVGTSASAFQKAITGKKVVDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF--------IIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + L+ + HLGM+G T K P+ + + Sbjct: 61 GKYFWLVLDSQPHPLFHLGMAGWVEYKNEETGYYRSTKPEKTEWPPKFWKFVLQMKEE-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFHKKN 164 + + + D RR + LV+ + + + PL+ GP+P D S +L + K Sbjct: 119 -PENEMAFVDARRLARIRLVDAAAEDMRKTTPLKENGPDPILDKSILTVDWLGKKLRSKK 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++GIGN E +++AKL P + + + + L + I V Sbjct: 178 VPVKALLLDQANISGIGNWVGDEVMYQAKLHPEQYSNTFSDEQ------IKALHEAIMYV 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG----EPCLSNCGQMIRRIVQAGRS 280 A+ A G S F + + + G E G+ I + GR+ Sbjct: 232 CDTAVAANGDS-----------DLFPEHWLMKHRWGKGKKEASKLPTGEKITFLKVGGRT 280 Query: 281 TFYCTYCQK 289 + QK Sbjct: 281 SAIVPSVQK 289 >gi|182438709|ref|YP_001826428.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467225|dbj|BAG21745.1| putative DNA repair hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 274 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 102/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE IRR + + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIRRLADDHAERFAGAPVRVTSPQGKFSDS---AALLDGRTLTATDAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N + D R Sbjct: 58 FGDTGWVHIHLGLFGKL-----GFGAAPPPPPTDTVRLRLVNAAHH-------ADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 106 TCALITEPEKRAIH--ERLGPDPLRGDEDGERAWQRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + + D+ + + ++ ID + L + + Sbjct: 164 YRAEVLFRHGIDPYRAGRDLTRATWDTIWADLGDLMREGVRNNRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + PC CG IR R+ F+C CQ Sbjct: 222 RPPRKDDHGGEVYVYRRANLPC-HICGTEIRTADLVSRNLFWCPRCQ 267 >gi|229493198|ref|ZP_04386990.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] gi|229319929|gb|EEN85758.1| formamidopyrimidine-DNA glycosylase [Rhodococcus erythropolis SK121] Length = 265 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 108/287 (37%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF + G + K+L Sbjct: 1 MPEGHTLHRLARLHARKFVGSPVRVLSPQGRF---AEDARLVDGHVLTSSDAWGKHLWHT 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + L++ VHLG+ G F T A P++ P V + + D R Sbjct: 58 YDNGLTVHVHLGLYGKF----TDAALPMEEPV-GQVRMRMVGADFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + K + + L++Q ++AG+GN+ Sbjct: 106 ACEVLLPPQVAAIE--ARLGPDPLRRDADPEKAWLRISKSKTAIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++P R + T + ++ +++ + G + H + Sbjct: 164 YRAELLFRHGINPERPGNLVSHGEWT------AMWADLVELMKVGVRRGKMHVVRAEHDN 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMKARNLFWCPVCQ 263 >gi|183983786|ref|YP_001852077.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177112|gb|ACC42222.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 268 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + +F + A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVVVSSPQGKFADS---AGAVDGRVLRAASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F S + + +P V + + D R Sbjct: 58 YAGGPVVHVHLGLYGAFTEWARSAGELLPDPV-GQVRMRMVGAEYG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ + L LGP+P + + + K + L++QK++AG+GN+ Sbjct: 110 VCEVIDDAQVADV--LARLGPDPLRKDADPSWAWARIAKSRRPIGALLMDQKVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + + + + ++ ++ + G + H Sbjct: 168 YRSELLFRHRIDPYRSGQRITEAEFSAA------WTDLVALMKVGLRGGKIVVVRPEHDH 221 Query: 244 GSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC CG + V GR+ F+C CQ Sbjct: 222 GAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVLEGRNVFWCPSCQ 267 >gi|271967519|ref|YP_003341715.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270510694|gb|ACZ88972.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 269 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF H G+ + + K+LL+ Sbjct: 1 MPEGHTIHRLAAQYRQAFGGRVVRAESPQGRFAAGAH---QIDGRVLRETDAHGKHLLLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + + VHLG+ G ++ V + L+N Y D R Sbjct: 58 FDDDRWLHVHLGIYGK-----SAFGPAPAPAPTGAVRLRLSNAEE-------YADLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ + K LGP+P + + + +++ L++Q +VAG+GNI Sbjct: 106 TCELLDPAEKKA--LHARLGPDPLRADADPELAWRRIGRSRTSIGVLLMDQSVVAGVGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y EAL+R + P R R L D++ + ++ ID + + + + Sbjct: 164 YRAEALFREGVDPSRPGRDLTHGQWKAIWADLVALMADGVRVGRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY ++G PC CG +R V AGR+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRSGMPCFL-CGGEVRTGVLAGRNLFWCPACQ 267 >gi|120601184|ref|YP_965584.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] gi|120561413|gb|ABM27157.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris DP4] Length = 371 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 18/225 (8%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + L + HL M+G I + I H V L T R+ ++D R+FG+ Sbjct: 165 DTVLGLAFHLKMTGRLFIHPPATPAGI----HTRVVFDLEGGT-----RLFFDDARKFGY 215 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + +P R LGPEP + +A + ++ +K LL+QK+VAG+GNIY Sbjct: 216 VRCITRRSLALWPFWRDLGPEPLET--DARGFAARLARRRGRIKALLLDQKVVAGVGNIY 273 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E+L+RA + P + +LI + L+ L +Q VL ++I GSS+RDY G Sbjct: 274 ADESLFRAGIRPDTQAHTLIP------ERLFALHGHLQDVLRESIAECGSSIRDYRDAHG 327 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN+F VYG+ G+PC +CG + AGR+T +C CQ+ Sbjct: 328 DAGAFQNSFRVYGRGGQPC-RHCGTTLATAQVAGRTTVFCPRCQR 371 Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----NLRFDFPHHFSAATRGKKIIDVSR 55 MPELPEVE I L + + + +H LR P F+ A +G++I DV R Sbjct: 1 MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLR--TPAAFTEAVQGRRIADVGR 58 Query: 56 RAKYLLIELEG 66 R K LL+ Sbjct: 59 RGKLLLVAFAS 69 >gi|307328128|ref|ZP_07607308.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] gi|306886247|gb|EFN17253.1| DNA-formamidopyrimidine glycosylase [Streptomyces violaceusniger Tu 4113] Length = 262 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 32/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + + + G++ R K+ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRVERVEVADAGVLHGVTAQRLKRDLEGRRFAAPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ + +++VH GM+G A+ + V L + +R+ Y D Sbjct: 61 LIAPTD-GPTVVVHFGMTGRL----ACGAESEPAGRFERVAFDLDDG-----HRLGYEDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L T L GP+ S + L + +K L +Q ++AG Sbjct: 111 RKLQGIWLAATEADVD-RILGDQGPDAL--SLSRADLDRLLAGRRGRVKATLTDQAVIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA++ P R +L + +L +++VL ++ AG R Sbjct: 168 LGNLLGDEILWRARIHPQRPANALTDDEH------ERLHTAMREVLRASVRAG----RVP 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G + +P CG +RR AGR++ +C +CQ+ Sbjct: 218 DDPDWLTGQRDDP--------DPHCPRCGHPLRRGRIAGRTSLWCPHCQR 259 >gi|226307305|ref|YP_002767265.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226186422|dbj|BAH34526.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 265 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 105/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + + RF + G + K+L Sbjct: 1 MPEGHTLHRLARLHARKFVGSPVRVLSPQGRF---AEDARLVDGHVLTSSDAWGKHLWHT 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + L++ VHLG+ G F +P+ V + + D R Sbjct: 58 YDNGLTVHVHLGLYGKFTDSALPMEEPV-----GQVRMRMVGADFG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + K + L++Q ++AG+GN+ Sbjct: 106 ACEVLLPPQVAAIE--ARLGPDPLRRGADPHQAWVRISKSKKAIGALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R + + T + ++ +++ + G + H + Sbjct: 164 YRAELLFRHGISPERPGNLISHDEWT------AMWADLVELMKVGVRRGKMHVVRAEHDN 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y ++ VY + G PC CG I V R+ F+C CQ Sbjct: 218 GDPAYAKDRPRTYVYRRAGSPC-RVCGTPILHSVMEARNLFWCPVCQ 263 >gi|315443627|ref|YP_004076506.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315261930|gb|ADT98671.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 264 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 106/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + A G+ + + K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRFV---DGATAVNGRVLKKATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ GSF P+ V + + D R Sbjct: 58 YDGGRVVHVHLGLYGSFTEWPLPPLLPV-----GQVRMRMVGTEYG-------ADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ + LGP+P + + +K + L++Q ++AGIGN+ Sbjct: 106 VCEVIDEPEIADI--VARLGPDPLRPDADPSLAWRRINKSRRPIGALLMDQSVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R S+ N L ++ ++ + G + H Sbjct: 164 YRSELLFRHRTDPFRPGTSVTANEFD------ALWTDLVALMKVGVRRGKIVVVLPEHDH 217 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R + R+ F+C CQ Sbjct: 218 GAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEARNLFWCPNCQ 263 >gi|302920238|ref|XP_003053028.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256733968|gb|EEU47315.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 376 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 116/309 (37%), Gaps = 35/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + + F AA GK+I+ + Sbjct: 1 MPEIAEVARIVHFLRLHVVGKRIVSASAIGDKNVFGKVGTSGEEVEAALEGKEIVSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK------------PIKNPQHNHVTISLT 104 KY I LE +++H GM+G I+ A P+ Sbjct: 61 GKYFWITLEKPPHLVMHFGMTGWMHIKDEKTAYTNYYKKMKDSELEQWPPKFWKFQF--- 117 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPA--DNSFNAIYLTHQF 160 + V + D RRFG + LV+ +Y PL GP+P + F YL + Sbjct: 118 KTEGSPGVEVAFTDARRFGRVRLVDCPGDQIRKYSPLVENGPDPVVDLDRFTEDYLRGKM 177 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++ +K LL+Q +++GIGN E L++AKL P + + T LYK+I Sbjct: 178 RARHVPIKALLLDQAMISGIGNWVADETLYQAKLHPEQYCDEFDDSQVT---TLYKMI-- 232 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 + V A+D G S H N G G G+ + I GR+ Sbjct: 233 -RYVCQTAVDKLGDSDEFPEHW------LFNYRWGKGSKGTATKLPNGEKLAFITVGGRT 285 Query: 281 TFYCTYCQK 289 + Y QK Sbjct: 286 SCYAPGVQK 294 >gi|261822349|ref|YP_003260455.1| endonuclease VIII [Pectobacterium wasabiae WPP163] gi|261606362|gb|ACX88848.1| DNA-(apurinic or apyrimidinic site) lyase [Pectobacterium wasabiae WPP163] Length = 263 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + G+++ + K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELK-----PYETQLVGQQVRQIETHGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + I L + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVANAGESPETKRD----LRIRLETQD---RAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIV 177 ++++ +P L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLTQETLATHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTASQLNEEQ------LQTLSRALLEIPRLSYNTRGT--V 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H G+I +F V+ + GE C CG +I R + + R ++C +CQ+ Sbjct: 217 DENHHHGAI----FSFKVFHREGESC-ERCGGIIERTMLSSRPFYWCPHCQR 263 >gi|145223169|ref|YP_001133847.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145215655|gb|ABP45059.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 264 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 105/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF + A G+ + + K+L Sbjct: 1 MPEGHTLHRLARQHQRRFGRAPVIVSSPQGRFV---DGATAVNGRVLKKATAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ GSF P+ V + + D R Sbjct: 58 YDGGRVVHVHLGLYGSFTEWSLPPLLPV-----GQVRMRMVGTEYG-------ADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ + LGP+P + + K + L++Q ++AGIGN+ Sbjct: 106 VCEVIDEPEIADI--VARLGPDPLRPDADPSLAWRRISKSRRPIGALLMDQSVIAGIGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R S+ D L ++ ++ + G + H Sbjct: 164 YRSELLFRHRTDPFRPGTSVT------ADEFDALWTDLVALMKVGVRRGKIVVVLPEHDH 217 Query: 244 GSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R + R+ F+C CQ Sbjct: 218 GAPSYREGRPRTYVYRRAGDPC-RVCSTPVRTVEMEARNLFWCPNCQ 263 >gi|72161098|ref|YP_288755.1| DNA repair hydrolase [Thermobifida fusca YX] gi|71914830|gb|AAZ54732.1| putative DNA repair hydrolase [Thermobifida fusca YX] Length = 292 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 118/302 (39%), Gaps = 29/302 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + RF + G+ + + K+L + Sbjct: 1 MPEGHTLHRLAIHFTKTFGGQRVRAASPQGRF---AEGAQRIDGRVLGEAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT-----------ISLTNNTNTKKY 112 + + VHLG+ G++ + + + P+ T + T + Sbjct: 58 FDSGEWVRVHLGLYGAWTFGDATGERSLGAPRTEAGTERALQRDADGFVVPPPPTGAVRL 117 Query: 113 RVI----YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R++ + D R ++++ + K LGP+P + + + + + Sbjct: 118 RLVSADAWADLRGPSACEVIDPAGKQAVQ--ARLGPDPLRADADPAAAWQKIRRSRTAIA 175 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLI 226 L+ Q ++AG+GNIY E+L+RA + P R R L Q D+++ L ++ I Sbjct: 176 VLLMRQDVIAGVGNIYRAESLFRAGIDPYRPGRDLTEPQWEALWADLVHLLRDGVRDGRI 235 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++ ++ G + A V +TG+PC C IR AGRS ++C Sbjct: 236 I------TTRPEHRTHPGPDIPREEAHYVAYRTGQPC-RVCSTPIRSAELAGRSLYWCPG 288 Query: 287 CQ 288 CQ Sbjct: 289 CQ 290 >gi|312193990|ref|YP_004014051.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] gi|311225326|gb|ADP78181.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EuI1c] Length = 292 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPE+E + L VT + LR P A G ++D +R K+ Sbjct: 1 MPELPEMEALASVLRDRAVGKVVTRAEPVAINALRTVSPGP--ADLVGATLVDATRHGKF 58 Query: 60 LLIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRV 114 L + G L ++ HL +G + + P + + + + + + + Sbjct: 59 LDLVFAGTGGERLDLVAHLSRAGWLRWKDSQPTTPGRGGRGGLAWRLVFDDGSG---FDL 115 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLN 173 ++ + LV + P + LG +P D +F L +K L + Sbjct: 116 TEAGTQKRLAVYLVRDPAE--VPGVARLGIDPLDPAFTVEALAALLTAAGRSQVKGVLTD 173 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q ++AG+GN Y E LW A+LSP + L D + L + + L A++A G Sbjct: 174 QSVLAGVGNAYSDEVLWAARLSPFAPSSGLSG------DQVAALHEALVGTLRAAVEAAG 227 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + +V+ +TGE C CG +R++ A RS YC CQ Sbjct: 228 GLGAADLKAEKKA-----NLAVHARTGEAC-PRCGDTVRQVSFADRSLQYCPTCQ 276 >gi|302502465|ref|XP_003013223.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] gi|291176786|gb|EFE32583.1| hypothetical protein ARB_00407 [Arthroderma benhamiae CBS 112371] Length = 408 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 116/328 (35%), Gaps = 54/328 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENVEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDDIRKYTPLKENGPDPVIDKAILTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIY--------------------VCEALWRAKLSPIRKTR 201 +K +K LL+Q ++G+GN E L+ A++ P + + Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGYVLHLLIYFPTTKEANAGSRDEILYHARIHPEQYSD 237 Query: 202 SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE 261 +L N + +L I V ++D G S F + ++ GK G Sbjct: 238 TLRDNQ------IKELHSSINYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGA 285 Query: 262 PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ I + GR++ QK Sbjct: 286 AGKLPSGEPIVFVTVGGRTSAVVPSVQK 313 >gi|168061202|ref|XP_001782579.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665899|gb|EDQ52568.1| predicted protein [Physcomitrella patens subsp. patens] Length = 496 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 114/300 (38%), Gaps = 35/300 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ + + + + + D P A GKKI++ R+ K Sbjct: 1 MPELPEVQAAKVLVGSRCLGGVIVKALVANDSKVIDGVTPAALQKALLGKKILETHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSC---------AKPIKNPQHNHVTISLTNNTNT 109 +L ++L+ GMSG+ +++ ++ V + L Sbjct: 61 HLWLQLDSPPYPSFQFGMSGAVVVKGVKGLQYKSSKVDDTEEFPSKYWKVHLKLDTG--- 117 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN 169 V + D RRF + L++ K PP+ LG + +A T K +K Sbjct: 118 --VEVAFTDKRRFARVRLLDDPAKE--PPISELGLDAYLELPSAKDFTEALKTKKGAIKA 173 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q +AGIGN E L+++K+ P + SL T +L I+ VL A+ Sbjct: 174 LLLDQSFLAGIGNWVGDEVLYQSKIHPEQSANSLKDEECT------RLHTAIRVVLDKAV 227 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + F ++ + + G I + GR++ Y QK Sbjct: 228 SVHADSEK-----------FPRSWIFHHRWDRKPGKIRGNQIETVTVGGRTSAYVPNIQK 276 >gi|295838891|ref|ZP_06825824.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] gi|295827240|gb|EDY42376.2| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SPB74] Length = 271 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 108/291 (37%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRATSPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT +D R Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGAAPPPTDTIRLRLTGPGGW-------SDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L++ K LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 106 ACALIDDEAKAA--LHARLGPDPLREADDGEAAWTRIARSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y EAL+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEALFRHGIDPDRPGRSLTRTE------WDALWADLRALMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + +PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHQPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|206575846|ref|YP_002239656.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|290510447|ref|ZP_06549817.1| endonuclease VIII [Klebsiella sp. 1_1_55] gi|226741117|sp|B5XZD9|END8_KLEP3 RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|206564904|gb|ACI06680.1| endonuclease VIII [Klebsiella pneumoniae 342] gi|289777163|gb|EFD85161.1| endonuclease VIII [Klebsiella sp. 1_1_55] Length = 263 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 102/291 (35%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K +TD L + + G+++ ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAIKGEPLTDAWFAFPQL-----QPYQSLLIGQRVTHIATRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L G L++ H + G + + + +K ++Y+ Sbjct: 56 LTHFSGGLTLYSHNQLYGVWRVVDAGEQPASN-------RVLRVRLQTARKAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L +GP+ D + + + ++ LL+Q + Sbjct: 109 ----IEMLTAEQVAHHPFLLRVGPDVLDMTLTVEEVKARLLSAKFRHRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ LS RK L + I + R Sbjct: 165 AGLGNYLRVEILWQVGLSGKRKAAELSDSQLDALAHALLAIPRLSYH-----------TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F V+ + GE C CG +I + + R ++C CQ Sbjct: 214 GQADDNKHHGAL-FRFKVFHRDGERC-ERCGGVIEKTTLSSRPFYWCPGCQ 262 >gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 385 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 119/308 (38%), Gaps = 31/308 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ P ++ + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP--ADNSFNAIYLTHQFH 161 + K + D RR G + LV+ +Y PL+ GP+P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN E L+ AK+ P + + +L ++ + +L I Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQ------IEQLYSAI 234 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++ G+S + F + +S GK G+ I I GR++ Sbjct: 235 NYVCSTSVGLLGNSEEFPSNWL-----FSHRWS-KGKANHSHQLPNGEKIVFITVGGRTS 288 Query: 282 FYCTYCQK 289 QK Sbjct: 289 AIVPAIQK 296 >gi|240170935|ref|ZP_04749594.1| formamidopyrimidine-DNA glycosylase [Mycobacterium kansasii ATCC 12478] Length = 268 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 26/289 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHHRRFAGAPVAVSSPQGRFADS---AAAVDGRVLRRTSVWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F A P+ P V + + +D R Sbjct: 58 YSGGGIVHVHLGLYGAFTEWERPAADPLPEPV-GQVRMRMVG-------AAFGSDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ S + + LGP+P + + + K + L++Q ++AG+GN+ Sbjct: 110 VCEVIDESQVAEV--VARLGPDPLRRDADPSWAWARIMKSRRPIGALLMDQTVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R ++ P R + + + D++ + +++ I A+ H Sbjct: 168 YRSELLFRHRIDPYRAGQRITEAEFAAAWTDLVALMKVGLRRGKIIAVR--------PEH 219 Query: 242 IDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC C +R GR+ F+C CQ Sbjct: 220 DHGAPSYRPDRPRTYVYRRAGDPC-RLCATTVRTAELEGRNLFWCPTCQ 267 >gi|298708421|emb|CBJ48484.1| conserved unknown protein [Ectocarpus siliculosus] Length = 532 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 116/311 (37%), Gaps = 41/311 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----HRKNLRFDF--------PHHFSAATRG 47 MPELPEVE R + T+T++ ++ +FD G Sbjct: 1 MPELPEVETSRLYVEEFCLGSTITNVHATEQGGGPRDGQFDDIVIGEDMTAKSLKDTLEG 60 Query: 48 KKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--QHNHVTISLTN 105 +KI+++ RR K + L+ + H GM+G+F ++ K +K + + Sbjct: 61 RKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 + + DPRR + L + PP+ LGP+P + + K + Sbjct: 121 IQMSNGACLALTDPRRLSRVKL--RAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTA 178 Query: 166 NLKNALLNQ-KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL Q ++V+G+GN E ++A + P +L + L + V Sbjct: 179 PIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQ------IAALHSRLLSV 232 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE------PCLSNCGQMIRRIVQAG 278 +A +A DY F + + + G+ + G I V G Sbjct: 233 CREACEARA----DYTS-------FPKEWLFHHRWGKGKNSEGAPRVSSGHPIVFDVVGG 281 Query: 279 RSTFYCTYCQK 289 R+T QK Sbjct: 282 RTTAIVPAVQK 292 >gi|121708175|ref|XP_001272051.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] gi|119400199|gb|EAW10625.1| Formamidopyrimidine-DNA glycosylase, putative [Aspergillus clavatus NRRL 1] Length = 369 Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 113/305 (37%), Gaps = 31/305 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I L + T+T + ++ + F A GK+++ ++ Sbjct: 1 MPELAEVSRIVHFLSEYVVGKTLTKVTTTNDDIVYGKAGTSASEFQKAMEGKRVVSAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSC--------AKPIKNPQHNHVTISLTNNTN 108 KY + + ++H GMSG + P+H L Sbjct: 61 GKYFWMIMSEPPHAVMHFGMSGWLKFDGVDTYYYRSDKHEDEEWPPKHWKF---LLETDG 117 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKN 164 K + D RR + LV+ + +Y PL+ GP+P + +L + K Sbjct: 118 EPKTEAAFVDVRRLSRVHLVDCPAEDIRKYSPLKNHGPDPILDKNILTEEWLAKKIKSKK 177 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K LL+Q ++GIGN E L+ AK+ P + + +L + +L I V Sbjct: 178 VPVKVFLLDQANISGIGNWMGDEILYHAKIYPEQYSNTLTDEQ------IKQLYSSINYV 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ S + F+ + GK + G+ I + GR++ Sbjct: 232 CTTAVHLLADSEQFPKDWL-----FKYRWG-KGKKNHTSVLPNGEKIIFLTVGGRTSAVV 285 Query: 285 TYCQK 289 QK Sbjct: 286 PSVQK 290 >gi|300788645|ref|YP_003768936.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299798159|gb|ADJ48534.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 268 Score = 188 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 111/287 (38%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++ G+ K+L + Sbjct: 1 MPEGHTLHRLARLHKRRFAGAPVAVSSPQGRFAAE---ASRLDGQVFAGAEAYGKHLFHD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + +HLG+ G+F +P+ V + L T+ D R Sbjct: 58 YGSHGIVHIHLGLYGTFGESPLPAPEPV-----GQVRLRLAGRTHW-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ LGP+P + + +++ L++Q ++AG+GN+ Sbjct: 106 RCELLDPGQADAIK--ARLGPDPLRRDAKPELAWARVSRSKTSIAALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R ++P+ R+L + + D++ + ++ ID + L + + Sbjct: 164 YRAEVLFRHGVAPLTPGRALDRPLWDDLWADLVILMRDGVRVGRIDTVRP--EHLPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G+PCL CG + GR+ ++C CQ Sbjct: 222 RAARVDRHGGEVYVYRRAGDPCL-VCGTPVAHSELVGRNLYWCPKCQ 267 >gi|284030196|ref|YP_003380127.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] gi|283809489|gb|ADB31328.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] Length = 299 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 113/288 (39%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R V + RF +A G+ + K+ L + Sbjct: 1 MPEGHTLHRLANDVWDAFGGRVVRASSPQGRFV---DGAALLDGRVLRHTEAHGKHFLAD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG + +HLG+ G +P+ V + L N+ Y D R Sbjct: 58 FEGGGWLHIHLGLIGKVDFGSAPIPEPV-----GQVRLRLQND-------AAYADLRGAT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ + + LGP+P + + + + + L++Q++++G+GN+ Sbjct: 106 VCEVLTDGEREA--LIGRLGPDPLRDDADPDLAWKRIQRSKLPIGRLLMDQEVLSGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+RAKL P+ + + G D+L + ++ ID + + + + Sbjct: 164 YRAEVLFRAKLHPMTPGNLVRKREWQGMWTDLLELMKYGVETGRIDTVTDDHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D VY + G+ C C +IR + AGR+ F+C CQ+ Sbjct: 222 RDPRRDDHGGEVYVYRRHGQHC-HVCDSVIRTELLAGRNLFWCPKCQR 268 >gi|284028154|ref|YP_003378085.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] gi|283807447|gb|ADB29286.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] Length = 287 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 23/289 (7%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE + L V + + + SA G I DV R K+L Sbjct: 4 PELPEVESLAGFLRERAVGRAVVRADITAISALKTYDPPISA-LVGLLIDDVRRHGKFLD 62 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV-TISLTNNTNTKKYRVIYNDPR 120 IE + +++HL +G P++ + + L + + + + + Sbjct: 63 IE-AQGVHLVIHLARAGWLRWREQQSTTPVRPGKGPIACRVVLDDESG---FDLTEAGTQ 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + +V + P + LGP+P + +A H+ LK L NQ ++AG Sbjct: 119 KKLAVYVVRD--VAEVPGIARLGPDPF--TLSAEDFGAILHEAGRVQLKGVLRNQSVIAG 174 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP + +L D L+ L +Q+ L DA+D Sbjct: 175 IGNAYSDEILHVARMSPFKPASNLSD------DELHVLYTAMQETLRDAVDRSKGLAAQD 228 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G V+G+ GE C CG ++R + A S YC CQ Sbjct: 229 LKSEKKSG-----LRVHGRKGEKC-PVCGDVVREVSFADSSLQYCATCQ 271 >gi|119717704|ref|YP_924669.1| formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] gi|119538365|gb|ABL82982.1| Formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] Length = 282 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 16/287 (5%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + RF +A G+ ++ K+L I Sbjct: 1 MPEGHTLHRLADEITATFAGRVVRTGSPQGRFADS---AALVDGQVLVGAEAWGKHLFIA 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P Q + I + + Y D R Sbjct: 58 FPDERFVHIHLGLYGKLDLVAGVEQVPAAVGQ-VRLRIVAADRSWHA-----YADLRGAT 111 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +LV + + GP+P + + + + + L++Q ++AG+GN+ Sbjct: 112 TCELVTREQRDAV--VARSGPDPLRADADPGRAWARIRRSKAPIGGLLMDQAVLAGVGNV 169 Query: 184 YVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R ++ P R +L Q D++ + + ++ ID + + + + Sbjct: 170 YRAELLFRHRIDPQRPGNTLRVGQWQAMWDDLVVLMREGVRTGRIDTVRPEHTP--EAMG 227 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY +TG+PC CG +R GR+ F+C CQ Sbjct: 228 RPPRRDDHGGEVYVYRRTGQPC-HVCGATVRTAELQGRNLFWCPRCQ 273 >gi|169628665|ref|YP_001702314.1| formamidopyrimidine-DNA glycolase [Mycobacterium abscessus ATCC 19977] gi|169240632|emb|CAM61660.1| Probable formamidopyrimidine-DNA glycolase [Mycobacterium abscessus] Length = 265 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 104/287 (36%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +AA G+ + K+L + Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFT---EGAAAVNGRTFVQAHAWGKHLFHD 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G+F P+ V + + D R Sbjct: 58 YGPVGVVHVHLGLYGAFTELPVPMGLPV-----GQVRMRIEGAEFG-------TDLRGAT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ L LGP+P + + K + + L++QKI+AG+GN+ Sbjct: 106 ACELIDAPQVDAI--LARLGPDPLRPRSDPASAFERIAKSHRPIGALLMDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R+ L L L ++ + + G D H Sbjct: 164 YRSEVLFRRRIDPYREGSRLDPEQ------LTALWSDLVDRMRVGLRVGKIVTVDPEHDC 217 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + G PC CG I R+ F+C CQ Sbjct: 218 GDPSYAPDRPRTYVYRRAGAPC-RVCGTPILTAEMDARNLFWCPSCQ 263 >gi|311894827|dbj|BAJ27235.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 268 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 112/288 (38%), Gaps = 23/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + RF +A G+ + + K+L + Sbjct: 1 MPEGHVIHRLAGEHDELFGGRPVRASSPQGRF---AEGAALIDGRVLDEAQAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G++ +P+ V + + +T Y D R Sbjct: 58 F-GEHWLHVHLGLYGTYAFGAGEPPEPV-----GQVRLRMVGDTG-------YADLRGPT 104 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + K LGP+P + + S + LL+QK++AG+GN+ Sbjct: 105 ACELLTPAEKAAVH--ARLGPDPLRPGDAGDAAWWRISRSGSTIAALLLDQKVLAGVGNV 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R +SP R R+L + D+ + + ID + + + + Sbjct: 163 YRAEVLFRLGISPHRPGRALSRPEWDAIWADLAALMRDGVAAGRIDTVRPEHTP--EAMG 220 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY ++ PCL CG +R A R+ F+C CQ+ Sbjct: 221 RPPRVDDHGGEVYVYRRSDRPCL-VCGTPVRTEELAARNLFWCPRCQR 267 >gi|227327538|ref|ZP_03831562.1| endonuclease VIII [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 263 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + A G+++ + R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELKL-----YEAELVGQQVRQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + V + + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETK--RDLRVRLETQDRAI-----LLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH---QFHKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLTLETLSTHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSHALLEIPRLSYNTRGTVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H +F V+ + GE C CG +I R + + R ++C +CQK Sbjct: 219 NRHHGA------IFSFKVFHREGERC-ERCGGIIERTMLSSRPFYWCPHCQK 263 >gi|134096732|ref|YP_001102393.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133909355|emb|CAL99467.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 275 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 22/279 (7%) Query: 11 RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSI 70 ++L +V + + ++ +S G+ + +R KYL ++ E L + Sbjct: 2 AQHLRDNATGRSVARVDIASLSVLKTVSPPWSE-LHGRTVTGATRYGKYLDLDCE-GLHL 59 Query: 71 IVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + HL +G + P K + + + L + + ++ +VE Sbjct: 60 VFHLARAGWMRWSDSLSPAPPKPGRGPIALRVHLGGG---VGFDLTEAGTQKKLSAWVVE 116 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + P + LGP+ S + LT + +K L +Q ++AGIGN Y E L Sbjct: 117 DPAE--VPGIAKLGPDAL--SLDVEGLTAVLSGRTERIKTVLTDQSMIAGIGNAYSDEIL 172 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 AKLSP L D + +L ++++L DA++ + + G Sbjct: 173 HAAKLSPYATAGRLD------ADAVERLHATMREILTDAVERSLKQDAARLKAEKRSG-- 224 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+G+TG PC CG +R + A RS YC CQ Sbjct: 225 ---MRVHGRTGLPC-PVCGDKVREVSFADRSLQYCATCQ 259 >gi|111219798|ref|YP_710592.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111147330|emb|CAJ58980.1| Formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 248 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 22/264 (8%) Query: 28 LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC 87 + RF + G+ + D K+LL+ + + + VHLG+ G++ Sbjct: 3 VASPQGRFT---EGARRLDGRPLTDAEAHGKHLLLRFDHDQVLHVHLGIYGTYAFGPGPA 59 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 P V + LT +T Y D R +L+E LGP+P Sbjct: 60 PVPTGA-----VRLRLTADTG-------YADLRGPNACELLEPGGVKTLRD--RLGPDPL 105 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + + + + LL+Q +VAG GNIY E L+RA + P+ R L + Sbjct: 106 RGDADPDLAWRRIERSRTPIAVLLLDQMVVAGPGNIYRAEVLFRAGVDPLLPGRDLTRRQ 165 Query: 208 GT--PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 T D++ + ++ ID + + + + + VY + G+PCL Sbjct: 166 WTAIWADLVTLMADGVRTGRIDTVRPEHTP--EAMGRPPRVDDHGGEVYVYRRAGQPCL- 222 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQK 289 C + A R+ F+C CQ+ Sbjct: 223 ICATTVLTNRLAARNLFWCPGCQR 246 >gi|288921551|ref|ZP_06415825.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] gi|288347068|gb|EFC81371.1| DNA-(apurinic or apyrimidinic site) lyase [Frankia sp. EUN1f] Length = 272 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 22/265 (8%) Query: 26 ICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHT 85 + + RF + G+ + K+LL+ + + +HLG+ G + + Sbjct: 17 VRVESPQGRF---ADGAGLLDGRVLAQAEAYGKHLLLRFDDERVLHIHLGIYGKYQLGPA 73 Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE 145 +P V + LT+ T Y D R +L+E L LGP+ Sbjct: 74 PAPEPTGA-----VRLRLTSGTG-------YADLRGPNACELLEPGEVKA--LLDRLGPD 119 Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P + + + + + L++Q +VAG GNIY E L+RA + P R L + Sbjct: 120 PLRPGADPEPAWRRIGRSRTPVAQLLMDQAVVAGPGNIYRAEVLFRAGVDPYLPGRDLTR 179 Query: 206 NNG--TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 D++ + ++ ID + + + + + VY + G+ C Sbjct: 180 AQWELIWSDLVELMADGVRAGRIDTVRPEHTP--EAMGRPPRVDEHGGEVYVYRRAGQLC 237 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQ 288 L C +R A R+ F+C CQ Sbjct: 238 L-VCEAEVRTARLAARNLFWCPRCQ 261 >gi|87125640|ref|ZP_01081485.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] gi|86166940|gb|EAQ68202.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. RS9917] Length = 182 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 9/184 (4%) Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 N + + D R FG M V + L+ LGPEP FNA YL Q Sbjct: 4 WNQAGDELRFVDLRSFGQMWWVPPGEAAESVITGLQALGPEPFSAEFNAKYLQTQLKGST 63 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++K ALL+Q +VAG GNIY E+L A ++P + SL D L +L + +V Sbjct: 64 RSIKAALLDQSLVAGTGNIYADESLHAAGIAPQIRAGSL------NLDQLGRLRDALVRV 117 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 L +I AGG++ D+ ++G G + SVY +TG+PC CG I R GRST +C Sbjct: 118 LELSIGAGGTTFSDFRDLEGVNGNYGGQASVYRRTGQPC-PRCGTAIERQKLVGRSTHWC 176 Query: 285 TYCQ 288 CQ Sbjct: 177 PVCQ 180 >gi|88706451|ref|ZP_01104156.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] gi|88699387|gb|EAQ96501.1| formamidopyrimidine-DNA glycosylase [Congregibacter litoralis KT71] Length = 273 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 113/294 (38%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + TV ++ F F+ G+++++V R K L Sbjct: 1 MPEGPEIRRAADRIANVLVDETVEEVAFA-----FPELQRFTKVLSGQRVLEVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + +I H + G + I AK K P N + + +D Sbjct: 56 LTHFDNDYAIYSHNQLYGVWKI-----AKRGKMPATNRSLRLALHTSGHSALLYSASDIS 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 + +P L TLGP+ ++ + +L L+Q + Sbjct: 111 ------VWPREEIGMHPFLATLGPDLLSAKLAWRDISERLAMPRFAGRSLAALYLDQHFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GN E L+ A + P R+ R L + +L +E + + + GG +L Sbjct: 165 AGSGNYLRSEILFCAGVHPKRRPRDLSRGERG------RLARETLDLPRRSYETGGITLP 218 Query: 238 DYVHID---GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ + F V+G+ G PC S C IRR R ++C CQ Sbjct: 219 PRLAATLKKTVKGFERRRFFVFGRDGRPCYS-CKDTIRRDSMGSRRIYWCPTCQ 271 >gi|306780507|ref|ZP_07418844.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|306785259|ref|ZP_07423581.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|306789618|ref|ZP_07427940.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|306793945|ref|ZP_07432247.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|306798339|ref|ZP_07436641.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|306804215|ref|ZP_07440883.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|306808785|ref|ZP_07445453.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|306968617|ref|ZP_07481278.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308326655|gb|EFP15506.1| DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308330081|gb|EFP18932.1| DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308333921|gb|EFP22772.1| DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308337724|gb|EFP26575.1| DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308341405|gb|EFP30256.1| DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308344891|gb|EFP33742.1| DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308349202|gb|EFP38053.1| DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308353823|gb|EFP42674.1| DNA glycosylase [Mycobacterium tuberculosis SUMu009] Length = 268 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 108/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLAQLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + D R Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGAEFG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + ++ + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 110 VCESIDDGEVADV--VARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|253798457|ref|YP_003031458.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289553745|ref|ZP_06442955.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|297635070|ref|ZP_06952850.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297732061|ref|ZP_06961179.1| DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313659397|ref|ZP_07816277.1| DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|253319960|gb|ACT24563.1| DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|289438377|gb|EFD20870.1| DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|328458225|gb|AEB03648.1| DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 268 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 108/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + D R Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGTEFG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + ++ + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 110 VCESIDDGEVADV--VARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|289805554|ref|ZP_06536183.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 258 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 104/287 (36%), Gaps = 32/287 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + +N LL+Q + Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ L+ K + L N + + L+ I + R Sbjct: 165 AGLGNYLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 + G F V+ + GE C CG +I + + R ++C Sbjct: 214 GQADENKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWC 258 >gi|15609601|ref|NP_216980.1| DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|15841988|ref|NP_337025.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31793645|ref|NP_856138.1| DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121638347|ref|YP_978571.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662299|ref|YP_001283822.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148823664|ref|YP_001288418.1| DNA glycosylase [Mycobacterium tuberculosis F11] gi|167969788|ref|ZP_02552065.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215404400|ref|ZP_03416581.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|215412221|ref|ZP_03420983.1| DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|215427847|ref|ZP_03425766.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|215431410|ref|ZP_03429329.1| DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215446710|ref|ZP_03433462.1| DNA glycosylase [Mycobacterium tuberculosis T85] gi|218754195|ref|ZP_03532991.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|219558461|ref|ZP_03537537.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|224990841|ref|YP_002645528.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|254232598|ref|ZP_04925925.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|254365240|ref|ZP_04981286.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254551512|ref|ZP_05141959.1| putative DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187470|ref|ZP_05764944.1| putative DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260201589|ref|ZP_05769080.1| putative DNA glycosylase [Mycobacterium tuberculosis T46] gi|260205768|ref|ZP_05773259.1| putative DNA glycosylase [Mycobacterium tuberculosis K85] gi|289443990|ref|ZP_06433734.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289448107|ref|ZP_06437851.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289570619|ref|ZP_06450846.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289575158|ref|ZP_06455385.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289746246|ref|ZP_06505624.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289751070|ref|ZP_06510448.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289754572|ref|ZP_06513950.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289758596|ref|ZP_06517974.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|289762633|ref|ZP_06522011.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|294994428|ref|ZP_06800119.1| putative DNA glycosylase [Mycobacterium tuberculosis 210] gi|298525942|ref|ZP_07013351.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|306776734|ref|ZP_07415071.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|306972844|ref|ZP_07485505.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|307080550|ref|ZP_07489720.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|307085148|ref|ZP_07494261.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|54040502|sp|P64159|Y2491_MYCBO RecName: Full=Putative DNA glycosylase Mb2491c; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb2491c; Short=Putative AP lyase Mb2491c gi|54042831|sp|P64158|Y2464_MYCTU RecName: Full=Putative DNA glycosylase Rv2464c/MT2539; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv2464c/MT2539; Short=Putative AP lyase Rv2464c/MT2539 gi|2791504|emb|CAA16041.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium tuberculosis H37Rv] gi|13882263|gb|AAK46839.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551] gi|31619238|emb|CAD97352.1| POSSIBLE DNA GLYCOSYLASE [Mycobacterium bovis AF2122/97] gi|121493995|emb|CAL72472.1| Possible dna glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601657|gb|EAY60667.1| hypothetical protein TBCG_02405 [Mycobacterium tuberculosis C] gi|134150754|gb|EBA42799.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|148506451|gb|ABQ74260.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|148722191|gb|ABR06816.1| hypothetical DNA glycosylase [Mycobacterium tuberculosis F11] gi|224773954|dbj|BAH26760.1| putative DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289416909|gb|EFD14149.1| DNA glycosylase [Mycobacterium tuberculosis T46] gi|289421065|gb|EFD18266.1| DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289539589|gb|EFD44167.1| DNA glycosylase [Mycobacterium tuberculosis K85] gi|289544373|gb|EFD48021.1| DNA glycosylase [Mycobacterium tuberculosis T17] gi|289686774|gb|EFD54262.1| DNA glycosylase [Mycobacterium tuberculosis 02_1987] gi|289691657|gb|EFD59086.1| DNA glycosylase [Mycobacterium tuberculosis T92] gi|289695159|gb|EFD62588.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710139|gb|EFD74155.1| DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|289714160|gb|EFD78172.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|298495736|gb|EFI31030.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|308214894|gb|EFO74293.1| DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308357772|gb|EFP46623.1| DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308361717|gb|EFP50568.1| DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|308365327|gb|EFP54178.1| DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|323718970|gb|EGB28120.1| DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904078|gb|EGE51011.1| DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 268 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 108/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF ++A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADS---ASALNGRVLRRASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + P V + + D R Sbjct: 58 YVGGPVVHVHLGLYGTFTEWARPTDGWLPEPA-GQVRMRMVGAEFG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + ++ + LGP+P + N + K + L++Q ++AG+GN+ Sbjct: 110 VCESIDDGEVADV--VARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R R + + ++ ++ + G + H Sbjct: 168 YRNELLFRHRIDPQRPGRGIGEPEFDAA------WNDLVSLMKVGLRRGKIIVVRPEHDH 221 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G Y + VY + GEPC CG +IR + GR+ F+C CQ Sbjct: 222 GLPSYLPDRPRTYVYRRAGEPC-RVCGGVIRTALLEGRNVFWCPVCQ 267 >gi|29829043|ref|NP_823677.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] gi|29606149|dbj|BAC70212.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces avermitilis MA-4680] Length = 280 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 113/293 (38%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVYQAARRLHSALAGKVLTRSDLR-------VPKFATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + + P H I T + + YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGSWKV-YAPGQRWSGGPAHQIRAIFGTADRTSVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH-QFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L ALL+Q+ +AG Sbjct: 107 --PVLELLRTADE--HRAVGHLGPDLLGPDWDPDRARENLLRDPARPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + +P L + L K + E + Sbjct: 163 IGNVYKSELCFLLRATPWLPVGDLPAEHLAQLPALAKKLLETNRD--------------- 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G + VYG+ PCL CG +R Q R T++C CQ Sbjct: 208 RPARSTTGRREQRLFVYGRAPRPCL-RCGTPVRVADQGDGSRERPTYWCPACQ 259 >gi|269139935|ref|YP_003296636.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|267985596|gb|ACY85425.1| endonuclease VIII [Edwardsiella tarda EIB202] gi|304559770|gb|ADM42434.1| Endonuclease VIII [Edwardsiella tarda FL6-60] Length = 280 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 110/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + T+T + +L ++A G +I + R K L Sbjct: 1 MPEGPEIRRAADGLRAAVGGGTLTRVWFGAPSL-----QRYAAGLVGCQITAIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + P + V + ++ ++Y+ Sbjct: 56 LIHFSNGMSMYSHNQLYGVWRVAAAGETPPTS--RSLRVRLE-----TAERAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + L LL+Q+ + Sbjct: 109 ----IQLAPRAQILRHPFLLRIGPDVLDPALTEAQVRERLCSPAFCRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A +SP R+ L T + + L+ A+ + R Sbjct: 165 AGLGNYLRVEILWQAGVSPQRRATELSPAQLTS--LCHALL---------ALPRLSYATR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G F V+ + GE C CG + R A R + C CQ Sbjct: 214 GQVDEGRHHGAL-FRFRVFHRAGEAC-ERCGTTLVRAQAASRPFYGCPRCQ 262 >gi|218887537|ref|YP_002436858.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|122891668|dbj|BAF45151.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758491|gb|ACL09390.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 336 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 18/220 (8%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + VHL M+G + A H V L + R+ ++D R+FG++ + Sbjct: 133 LGVHLKMTGRLFVYGPEVAPNT----HTRVVFGLDDGN-----RLFFDDARKFGYVRALS 183 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 + + R+LGPEP + + A F + +K LL+Q ++AGIGNIY E+L Sbjct: 184 DADLATWDFWRSLGPEPLEIA--APDFAALFRGRRGRIKALLLDQTVIAGIGNIYADESL 241 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 +RA + P + L + L L + VL ++I GSS+RDY G G F Sbjct: 242 FRASIRPDAQAGELSP------ERLCVLHGHLVDVLRESIAECGSSIRDYRDAHGDAGAF 295 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 QN F VYG++G+PC++ CG+ + AGR+T +C CQK Sbjct: 296 QNRFRVYGRSGQPCVA-CGRALTTGKVAGRTTVFCERCQK 334 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE I L + + + + + F+ G+ I V RR K L Sbjct: 1 MPELPEVETIACGLRPQLTGRRIVSVLVRNEGTVQGDAAAFARCVPGRVIAGVGRRGKLL 60 Query: 61 LIEL 64 L+EL Sbjct: 61 LMEL 64 >gi|260597118|ref|YP_003209689.1| endonuclease VIII [Cronobacter turicensis z3032] gi|260216295|emb|CBA29259.1| Endonuclease 8 [Cronobacter turicensis z3032] Length = 263 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T + L+ F A G ++ R K L Sbjct: 1 MPEGPEIRRAADKLEAAVADKPLTHVWFAFPELK-----AFEAPLTGARVERFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + +K + T SL T+ V+ Sbjct: 56 LTHFSCGLTLYSHNQLYGVWRV--------VKAGETPQTTRSLRVRLETEDAAVLLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +++++ + L+ +GP+ D S + + LL+Q + Sbjct: 108 E---IEMLDADGVAAHAFLQRVGPDVLDMSLTVEQVKERLLSPRFHRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K L L L + ++ + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPRHKAIELNNMQ------LDALARACLEIPRLSYQTRGT--- 215 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + G+ C CG +I + + R ++C CQ Sbjct: 216 --VDENKHHGAL-FRFEVFHRAGKKC-RRCGGIIEKTTLSSRPFYWCPGCQ 262 >gi|168705276|ref|ZP_02737553.1| formamidopyrimidine-DNA glycosylase [Gemmata obscuriglobus UQM 2246] Length = 214 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 102/213 (47%), Gaps = 18/213 (8%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G F + + P H H +L N + + + D RRFG + + Sbjct: 1 MTGQFTVVPADAPE----PDHLHAVFALDNG-----HELRFRDQRRFGSAEFFADRAAVE 51 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 LGPEP + +A Y NLK LL+Q +VAG+GNIY EA +RAKL Sbjct: 52 SEMNAELGPEPFNI--DADYFRAAVSGTGRNLKAVLLDQTVVAGVGNIYADEACFRAKLH 109 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R L L + ++ VL AI++ GS++RDYV G G FQN F+V Sbjct: 110 PGRPGNKLTAGE------CDALREAVEAVLTRAIESRGSTIRDYVGGSGLRGGFQNEFAV 163 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 YG+TGEPC C + AGR++ +C CQ Sbjct: 164 YGRTGEPC-PTCAAAVVCARYAGRASHFCPRCQ 195 >gi|50120294|ref|YP_049461.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] gi|57012664|sp|Q6D7H0|END8_ERWCT RecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII gi|49610820|emb|CAG74265.1| endonuclease VIII [Pectobacterium atrosepticum SCRI1043] Length = 263 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 113/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + G+++ + R K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELK-----PYETELVGQQVRQIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + I L + ++Y+ Sbjct: 56 LTYFSHDRVLYSHNQLYGVWRVVNAGESPETKRD----LRIRLETQD---RAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIV 177 ++++ +P L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLTLDTLTAHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTASQLNEEQ------LQTLSRALLEIPRLSYNTRGTVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + H +F V+ + GE C CG I R + + R ++C +CQ Sbjct: 219 NRHHGA------IFSFKVFHREGESC-ERCGGTIERTMLSSRPFYWCPHCQ 262 >gi|164428247|ref|XP_958637.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] gi|157072070|gb|EAA29401.2| hypothetical protein NCU05984 [Neurospora crassa OR74A] Length = 415 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 116/309 (37%), Gaps = 37/309 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ L + + F +A GKK++ + Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVIKHAEAIDDGNVFGKVGTDGPKMAAGLIGKKMVSAGTQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK------------PIKNPQHNHVTISLT 104 KY +EL +++H GM+G I+ A P++ I Sbjct: 61 GKYFWMELSKAPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWKFKIETE 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQF 160 + + DPRRFG + +V+ K +Y PL GP+P + F YL + Sbjct: 121 DGDEMA-----FTDPRRFGRVRVVDCPGKDIRKYSPLVENGPDPVVDLDVFTEDYLREKM 175 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K LL+Q +++GIGN E L+ AKL P + + +L + Sbjct: 176 KSRRVPIKALLLDQAVISGIGNWVADEVLYHAKLHPEQYCNDFSDAE------MKQLYES 229 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I+ V A+D G S + + + + + + + T G + + GR+ Sbjct: 230 IRYVCQTAVDKLGDSDQFPDDWLFNYRWGKGSKNAHSHT------PNGDKLAFLTVGGRT 283 Query: 281 TFYCTYCQK 289 + Y QK Sbjct: 284 SCYAPARQK 292 >gi|239944741|ref|ZP_04696678.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 15998] gi|239991205|ref|ZP_04711869.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces roseosporus NRRL 11379] gi|291448200|ref|ZP_06587590.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291351147|gb|EFE78051.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 289 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 111/303 (36%), Gaps = 34/303 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHAALAGQVLTRSDLR-------VPRFATADLTGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + P H I YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGAWRVF-APDERWRGGPGHQIRAILGNTGHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T + + + LGP+ ++ L + L ALL+Q+ +AG Sbjct: 107 --PVLELLRTDEEDR--AVGHLGPDLLGPDWDPAIALDRLLAVPDRPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + A+++P +L L + + + S LR Sbjct: 163 IGNVYKSELCFLARVTPWLPVGALPDGVLPRLVTLAERLLHANRDRPTRTTTITSELRTP 222 Query: 240 VHIDGSIG--------------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 Q VYG+ PCL CG IR Q R T++C Sbjct: 223 PTRGPGPAPVLDSGRPRPRPPHRVQERLYVYGRARRPCL-RCGTPIRLAGQDDRPTYWCP 281 Query: 286 YCQ 288 CQ Sbjct: 282 GCQ 284 >gi|313836704|gb|EFS74418.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA2] gi|314929889|gb|EFS93720.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL044PA1] gi|314972317|gb|EFT16414.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL037PA3] gi|328907746|gb|EGG27510.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium sp. P08] Length = 272 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 115/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + T + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIGSAFADTQVEVTSPQGRF---AESAAMLDGALLTSAQAWGKHLVVD 57 Query: 64 LEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G + P V + +T+ V D R Sbjct: 58 FDNHRPDHLLHIHLGLIGKLTVGP-------IVPVVGQVRLRITDG-------VTAADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L+ T+GP+P + + + + + + + LL+QK+ AG+ Sbjct: 104 GPQMCELISDDEWGTVA--ATIGPDPIRDDADPDIAWDKVRRSSRRISDLLLDQKVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P+ + + + + ++ ++ ++AG Sbjct: 162 GNIYRAEVLFRHRIDPVTPGKQIFHS------TWLAMWDDLVMLMRAGVEAGRIDTVQPE 215 Query: 241 HIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + G+PCL C +R I Q GR F+C CQ+ Sbjct: 216 HTPEAMGRLPRVDRHGGEVYVYRREGQPCL-VCNTPVRMIAQGGRHLFWCPQCQR 269 >gi|119475797|ref|ZP_01616149.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] gi|119450424|gb|EAW31658.1| endonuclease VIII [marine gamma proteobacterium HTCC2143] Length = 279 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 29/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+KN TV I L + F +G K++ + R K L Sbjct: 1 MPEGPEIRRAADKIEAVLKNKTVEKIEFGLPAL-----NPFVRPLQGSKVLSLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + L+I H + G + + K K P+ N + +D Sbjct: 56 LTHFDSGLTIYSHNQLYGVWHVV-----KRDKLPKTNRQLRLAIHTDQHSALLFSASDIT 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 + + ++ L+ +GP+ + S + + K L + L+Q + Sbjct: 111 VWETQHI------EEHHFLKRIGPDILNPSLAWRTVADRLQSKAFAGRALSSVYLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A + P K+R L + + KL + +V + G ++ Sbjct: 165 AGLGNYLRSEILFIAGIHPSCKSRDLSKGQ------IGKLARTTLEVSQRSYSLAGVTIP 218 Query: 238 DYV-HIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G Y + F V+G+ G+PC C I+R R + C+ CQ+ Sbjct: 219 ERQYKVLKKQGVTYGKARFFVFGRAGKPC-RVCQTKIQRSTANSRRIYTCSTCQR 272 >gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens] Length = 259 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 98/259 (37%), Gaps = 19/259 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +R L T+ + D P + GKKI+ R+ K Sbjct: 1 MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSG----------SFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 +L ++L+ GMSG + + ++ V + L+ Sbjct: 61 HLWLKLDSPPWPSFQFGMSGAVIIKGVKGPQYRSSKVGDEEEAFPTTYSKVHLVLSTG-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + D RRF + L+E + PP+ LG + +A L K ++K Sbjct: 119 ---VELAFTDKRRFARVRLLEDP--SKVPPISELGFDAYLELPSAEQLIEAMKTKKGSVK 173 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +AGIGN E L+ AK+ P + SL + T + + E + Sbjct: 174 ALLLDQSFIAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDAD 233 Query: 229 IDAGGSSLRDYVHIDGSIG 247 + S + D G Sbjct: 234 SEQFPRSWLYHHRWDKKPG 252 >gi|297199678|ref|ZP_06917075.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713952|gb|EDY57986.1| endonuclease VIII/DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 269 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + +F +A G ++ K+L + Sbjct: 1 MPEGHTIHRLAQDYAAAFQGAKPHVTSPQGKF---SDAAALLTGSELTRTEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + L N T Y D R Sbjct: 58 FRDTDWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLANTT-------AYVDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ + K LGP+P + + + + + L++QK++AG+GN+ Sbjct: 106 TCALITPAEKRSIHD--RLGPDPLREDADPHTAYRRISRSRTTIAALLMDQKVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R ++ P R + L D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHRVDPYRAGKDLTPAEWDAIWADLVELMREGVRNNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + PC CG IR A R+ F+C CQ Sbjct: 222 RPPRVDDHGGEVYVYRRATLPC-HICGGEIRTADLAARNLFWCPACQ 267 >gi|124005766|ref|ZP_01690605.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] gi|123988834|gb|EAY28440.1| formamidopyrimidine-DNA glycosylase N-terminal domain family [Microscilla marina ATCC 23134] Length = 265 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 110/288 (38%), Gaps = 28/288 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE ++ + V + + + R KYL Sbjct: 1 MPELPEVERFKQYFEGTALHQKVVQVEIADAGVLACTAETLKEVAEKHTFDKTDRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 IE + +++H GMSGS P+ V L N + + ++ PR Sbjct: 61 FIETSADKVLMIHFGMSGSLKYYRDD------PPRFGRVVFHLANG-----FHLAFDCPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG +D+ + YQ + L + S+ + +K LLNQ++ AG+ Sbjct: 110 KFGRIDVADNVKAYQAK--KKLSTDAYKMSW--EEFEQNTAGRKGLIKPLLLNQQVAAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN E L++A++ P +T L +N + K+ +Q + + ++ Sbjct: 166 GNWIADEILFQARVHPETRTNKLSKNELRL--VYDKMRDILQTAVSHEANYNHYPKDYFI 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H G + E C NCG + + GR+T+ C CQ Sbjct: 224 HRRGWT----------DQNTENC-PNCGTKVHYMKVGGRATYLCEVCQ 260 >gi|260578983|ref|ZP_05846885.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] gi|258602848|gb|EEW16123.1| DNA-formamidopyrimidine glycosylase [Corynebacterium jeikeium ATCC 43734] Length = 216 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 30/232 (12%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL---- 127 +HLGMSG ++ + HV I + + + D R FG L Sbjct: 1 MHLGMSGQMLVAEPGQVQS------PHVRIR---AGLSDGRELCFVDQRTFGEWRLEKAV 51 Query: 128 ---------VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 V + + + + +P + +F+A + K + +K LLNQ++V+ Sbjct: 52 PDPWAVGAGVASPKNFLPQNVSHISADPLEPAFDAQAAVERMKSKRAAVKMVLLNQEVVS 111 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNIY EAL+ A + P R L + L++++Q +V+ A++ GG+S Sbjct: 112 GIGNIYADEALFLAGVRPRRSAALLSRP------TLHRVLQSAAEVMERALEQGGTSFDS 165 Query: 239 -YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YV+++G+ GYF + +VYG+ GE C CG I+R+V GRST YC CQK Sbjct: 166 LYVNVNGASGYFSRSLNVYGRGGEAC-KRCGAPIKRVVVGGRSTHYCATCQK 216 >gi|302549792|ref|ZP_07302134.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|51317971|gb|AAU00096.1| putative ORF261 [Streptomyces viridochromogenes] gi|302467410|gb|EFL30503.1| formamidopyrimidine-DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 261 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ + + D Sbjct: 61 LLART-GGPTLVLHFGMTGRLVCCHPGDA----VEAHDRVLFTLSGGRQLR-----FRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L LR GP+ + + + +LK AL +Q ++AG Sbjct: 111 RKLQGLWLAHDDFDID-RLLRRQGPDAL--TVDRAEFEAVLCARRGSLKTALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA+L P R+TR L + + L +L ++ L A+ AG RD Sbjct: 168 LGNLLADEILWRARLRPDRRTRELTEAD------LRRLYGRMRGTLRAAVPAGCVPPRD- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + +P CG +RR AGR T +C CQ Sbjct: 221 -----------SWLTGHRDDPDPTCPRCGTGLRRSRMAGRGTVWCPRCQ 258 >gi|302551419|ref|ZP_07303761.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302469037|gb|EFL32130.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 273 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 102/287 (35%), Gaps = 22/287 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R T +F G ++ K+L + Sbjct: 6 PEGHTIHRLAQDYAAAFLHTAPRTSSPQGKFAPAATL---LSGAELTRTEAHGKHLFLGF 62 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G P + V + L N+T Y D R Sbjct: 63 RDTDWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLANDT-------AYVDLRGPTT 110 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 L+ K LGP+P + + + + + + L++QK++AG+GN+Y Sbjct: 111 CALITPPEKQAIHD--RLGPDPLRDDADPDIAYRRIARSRTTIAALLMDQKVIAGVGNVY 168 Query: 185 VCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 E L+R ++ P R R + D++ + + ++ ID + + + + Sbjct: 169 RAEVLFRHRIDPYRAGRDVTPAEWHALWTDLVELMHEGVRNNRIDTVRPEHTP--EAMGR 226 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG IR A R+ F+C CQ+ Sbjct: 227 PPRVDDHGGEVYVYRRADLPC-HICGGEIRTADLAARNLFWCPACQR 272 >gi|296170468|ref|ZP_06852056.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894939|gb|EFG74660.1| DNA-formamidopyrimidine glycosylase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 266 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 24/288 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF SA G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFGRAPVAVSSPQGRFAD----SAVVDGRVLRRTSVWGKHLFHH 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F + A + V + + D R Sbjct: 57 YAGGPIVHVHLGLYGAFTEWPRAGA--VLPEPVGQVRMRMVGAEYG-------ADLRGPT 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ L LGP+P N + + + K + L++Q ++AG+GN+ Sbjct: 108 VCEVIDEGRVSDV--LAKLGPDPLRNDADPSWAWKRIAKSRRPVGALLMDQTVMAGVGNV 165 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R R + + D Y ++ ++ + G + H Sbjct: 166 YRSELLFRHGIDPFRPGRDVGE------DEFYAAWTDLVALMKVGLRRGQIVVVRPEHDH 219 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ Y + VY + GE C CG IR V GR+ F+C CQK Sbjct: 220 GAPPYRPDRPRTYVYRRAGEAC-RVCGDAIRTTVLEGRNVFWCPSCQK 266 >gi|331695758|ref|YP_004331997.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] gi|326950447|gb|AEA24144.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] Length = 278 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 103/287 (35%), Gaps = 17/287 (5%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLARRHGRLFGRAPVRVSSPQGRF---EQAAALLDGAVLTRADAHGKHLFHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F V + + T+ D R Sbjct: 58 YGRDRVVHVHLGLYGTFDETELPEPGGAPPEPRGQVRMRIVGATH-------VADLRGPT 110 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ LGP+P + + + +S L L++QK+VAG+GN+ Sbjct: 111 ACELITDGEVRALR--ARLGPDPLRRDADPDLAWERIRRSSSPLATLLMDQKVVAGVGNV 168 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R+L + + D++ + +++ ID + R Sbjct: 169 YRAELLFRHGIDPQLPGRALPRGTWDAMWADLVVLMRDGVRRGRIDTVAPEHDPRR--RG 226 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G VY + G PCL CG + A R+ F+C CQ Sbjct: 227 EPGRKDRHGGEVYVYRRQGMPCL-VCGTPVLHAEHAARNLFWCPTCQ 272 >gi|313819617|gb|EFS57331.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA2] gi|313822058|gb|EFS59772.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA1] gi|313823706|gb|EFS61420.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA2] gi|313826029|gb|EFS63743.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA1] gi|314924755|gb|EFS88586.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL036PA3] gi|314961957|gb|EFT06058.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA2] gi|314978934|gb|EFT23028.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA2] gi|314986623|gb|EFT30715.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA2] gi|314990979|gb|EFT35070.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA3] gi|315083619|gb|EFT55595.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA2] gi|315087041|gb|EFT59017.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA3] gi|315089216|gb|EFT61192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL072PA1] gi|327329636|gb|EGE71392.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA3] gi|328752463|gb|EGF66079.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL020PA1] gi|332676015|gb|AEE72831.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes 266] Length = 299 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 114/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|227114756|ref|ZP_03828412.1| endonuclease VIII [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 263 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 115/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + G+++ + K L Sbjct: 1 MPEGPEIRRAADKLVEAVVGKTLTRVWFAFPELK-----PYETELVGQQVRQIDTHGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + + H + G + + + + K + V + + ++Y+ Sbjct: 56 LTYFSNDRVLYSHNQLYGVWRVVNAGESPETK--RDLRVRLETQDRAI-----LLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIV 177 ++++ +P L+ +GP+ D S + + LL+Q + Sbjct: 109 ----IEMLTPETLSTHPFLQRIGPDVLDLSLTPEQVCERLLLPRFRRRQFSGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P L + L L + + ++ + + G+ Sbjct: 165 AGLGNYLRVEILWQAQLAPQHTAAQLNEEQ------LQTLSRALLEIPRLSYNTRGTVDE 218 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D H +F V+ + GE C CG +I R + + R ++C++CQK Sbjct: 219 DRHHGA------IFSFKVFHREGERC-ERCGGIIERTMLSSRPFYWCSHCQK 263 >gi|111226069|ref|YP_716863.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] gi|111153601|emb|CAJ65359.1| formamidopyrimidine-DNA glycosylase [Frankia alni ACN14a] Length = 292 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 113/294 (38%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ + L V + + L+ P +A G + V R K+ Sbjct: 1 MPELPEVDALAAFLRETALGRVVERVEPVAVSALKTFDPP--VSALHGAALAAVERHGKF 58 Query: 60 LLIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L + L ++ HL +G + + A P + P + + +T + + + + Sbjct: 59 LDLVFALPTGERLDLVTHLARAGWLRWKPSQPAAPAR-PGRGPLALRVTFDDRS-GFDLT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQ 174 ++ + +V + P + LG +P F L LK L +Q Sbjct: 117 EAGTQKRLAVYVVRDPAE--VPGIARLGLDPLGADFTVAALEEILAAAGRAQLKGVLTDQ 174 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN Y EALW A+LSP + L L + VL A D+ Sbjct: 175 SRLAGVGNAYSDEALWTARLSPYKPASGLSAAETAS------LHAALVGVLTAARDSAAG 228 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + SV+G+ G PC CG +R + A R+ YC CQ Sbjct: 229 LAAGELKAEKKA-----NLSVHGRAGSPC-PRCGDTVREVSFADRALQYCPTCQ 276 >gi|304311679|ref|YP_003811277.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] gi|301797412|emb|CBL45632.1| Formamidopyrimidine-DNA glycosylase [gamma proteobacterium HdN1] Length = 271 Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 114/291 (39%), Gaps = 26/291 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I L + N + ++ L +S +I + R K L Sbjct: 1 MPEGPEIRRIADQLSAALLNKPLHEVWFAFPKL-----QSYSPQLHRSQITGIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LS+ H + G +II ++ PI + + V I+ N T T Sbjct: 56 LTHFSIGLSLYSHNQLYGRWII--STPDDPITSTRSPRVRIAANNVTATLYSA------- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++L T+ +P L+ +GP+ D F + + H+ H NL LL+Q Sbjct: 107 --SNIELWPTNEVQSHPFLQRIGPDVLDKEFTSDQVAHRLLQPHFARRNLGALLLDQSFF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LWRA+LSP + + L + I + + Sbjct: 165 AGLGNYLRAEILWRAELSPSSRPQDLTPEKISSLAHAILNIPRLSYATRGLVADSARIAP 224 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G F F V+ + G C S CG +I++ R F+C +CQ Sbjct: 225 DPYQ----DGNF--HFEVFKREGMLC-SRCGSVIQKATHNARPLFFCAHCQ 268 >gi|307329212|ref|ZP_07608377.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306885111|gb|EFN16132.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 115/293 (39%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P +A G+++++V R K+L Sbjct: 30 MPEGDTVWQTAQRLHQALAGPPLTRSDLR-------VPRLATADLTGRRVLEVVPRGKHL 82 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T YR+ Sbjct: 83 LTRVEGGLTLHSHLRMDGSWQVYGPG-ERWRGGPHHQIRAILATAAHTAVGYRL------ 135 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T + + + LGP+ ++ L + L ALL+Q+ +AG Sbjct: 136 --PVLELLRTGDEDKV--VGHLGPDLLGPDWDPDEALRRLLADPSRPLGEALLDQRNLAG 191 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + ++SP + +L+ +K+L + Sbjct: 192 IGNVYKSELCFVLRVSPWLPIGEVSSPE--------RLVAHAKKLLEANRNR-------R 236 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + + VYG+ G PCL CG +R Q RSTF+C CQ Sbjct: 237 ARVTTAEPRPDRRLWVYGRPGRPCL-RCGTPVRAADQGRAGQERSTFWCPSCQ 288 >gi|306834739|ref|ZP_07467805.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] gi|304569376|gb|EFM44875.1| DNA-formamidopyrimidine glycosylase [Corynebacterium accolens ATCC 49726] Length = 271 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 112/290 (38%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + + RF +A G +I K+L + Sbjct: 1 MPEGHVIHRLALTLNADYRGMPLSVTSPQGRFATE---AAILDGAEIDHAEAFGKHLFVH 57 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ +HLG+ G E + + I + N + R Sbjct: 58 FTAANPAHTLYIHLGLIGKLSFEPREDTR-------GQIRIRIDNGAQAAQL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ + L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 GPQFCLLLT--EEDYQARLTKVGQDPLRADADPEALWTKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+RA LSP + + + KD++ + ++ ID + A S + Sbjct: 162 GNIYRAEALFRAGLSPFTPGKDVSRETFFAIWKDLVELMNYGVEHGRIDTVRAEHSP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D VY + G PC CG I V GR+ F+C CQ Sbjct: 220 AMGRDPRKDDHGGEVYVYRRAGLPCY-VCGTPIAEQVMEGRNLFWCPTCQ 268 >gi|289428750|ref|ZP_06430433.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] gi|289158148|gb|EFD06368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J165] Length = 272 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIGLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVD 57 Query: 64 LEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 58 FDNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L+ T+GP+P + + + + + + + LL+Q++ AG+ Sbjct: 104 GPQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P + + + + ++ ++ +++G Sbjct: 162 GNIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPE 215 Query: 241 HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 216 HTPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|297562590|ref|YP_003681564.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847038|gb|ADH69058.1| DNA-(apurinic or apyrimidinic site) lyase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 293 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 110/303 (36%), Gaps = 30/303 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R K + RF +A G+ + + K+L + Sbjct: 1 MPEGHTLHRLAAHFDKTFGGGAVRASSPQGRF---ADGAARIDGRVLTESEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS-----------LTNNTNTKKY 112 + + VHLG+ G++ + + P+ + Sbjct: 58 FDSGEWLRVHLGLYGAWSFGDADGERHLGAPRAAGGARRELLRDAEGFVVAPEPVGAVRA 117 Query: 113 RVI----YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R++ + D R ++V K LGP+P + + + +++ Sbjct: 118 RLVNSSGWADLRGPSACEVVTEDDKRAVQD--RLGPDPLRDDADPERAWRVVSRSRTSIA 175 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 L+ Q +VAGIGNIY E+L+RA L P+ R L D +L ++ +L D Sbjct: 176 ALLMRQDVVAGIGNIYRAESLFRAGLDPMTPGRDLT------ADQWSRLWDDLSGLLRDG 229 Query: 229 IDAG---GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + G + D ++ V +TGEPC C + AGR+ ++C Sbjct: 230 VRDGYIITTLPEHRPDPDARPVPRPDSLYVCYRTGEPC-RVCSSPVASAELAGRTLYWCP 288 Query: 286 YCQ 288 CQ Sbjct: 289 RCQ 291 >gi|297156756|gb|ADI06468.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P + G++++DV+ R K+L Sbjct: 1 MPEGDTVWRTARRLDQALAGRQLTGCDLR-------IPRLATVDLAGRQVMDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M G++ + + P H I T YR+ Sbjct: 54 LTRLEGGLTLHSHLRMDGAWHLYDPG-ERWRGGPLHQVRAILSTAERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVLELLRTTDEDR--AVGHLGPDLLGPDWDPHEALRRLLADPARPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + ++SP + + +L++ + A + R Sbjct: 163 IGNVYKSELCFLVRVSPWLPVGQVPSPERLVA-LAKRLLEANKARPARITTAESRADR-- 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G+PCL CG + R+ Q RST++C CQ Sbjct: 220 ------------RLWVYGRAGKPCL-RCGTPV-RMEQGRADKERSTYWCPACQ 258 >gi|237785613|ref|YP_002906318.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] gi|237758525|gb|ACR17775.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium kroppenstedtii DSM 44385] Length = 269 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF + K+L I+ Sbjct: 1 MPEGHVIHRLASSLNREFAGQETAVSSPQGRFATEAD---QLNHTVLKHAEAHGKHLFID 57 Query: 64 LEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E N + +HLG+ GS + + V + + ++T D R Sbjct: 58 FEANQAAHVVYIHLGLIGSLRFSDLAEPR-------GQVRLRIASDTRA-------ADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ K + LG +P D + + + + + L++Q I AG+ Sbjct: 104 GPQWCRLITDEEKDT--AIGKLGADPLDPHADPSRSYQRIKRSSKPISTLLMDQHIFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R L+P + + L ++ D++ + + ID + + + Sbjct: 162 GNIYRAETLFRLGLNPELRGKDLTDDDLHAIWNDLVETMTMGFRVGKIDTVRPEHTP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + VY + G PC CG I GR+ F+C CQ Sbjct: 220 AMGREPRVDAHGGEVYVYRRAGLPCY-VCGTTIVERKVDGRNLFWCPTCQ 268 >gi|50843091|ref|YP_056318.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|50840693|gb|AAT83360.1| formamidopyrimidine-DNA glycosylase [Propionibacterium acnes KPA171202] gi|313763490|gb|EFS34854.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA1] gi|313773644|gb|EFS39610.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL074PA1] gi|313793880|gb|EFS41904.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA1] gi|313801271|gb|EFS42522.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL110PA2] gi|313811479|gb|EFS49193.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA1] gi|313816671|gb|EFS54385.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA1] gi|313829499|gb|EFS67213.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL063PA2] gi|313831220|gb|EFS68934.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL007PA1] gi|313834242|gb|EFS71956.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL056PA1] gi|313840005|gb|EFS77719.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL086PA1] gi|314914787|gb|EFS78618.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA4] gi|314919394|gb|EFS83225.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA1] gi|314920697|gb|EFS84528.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL050PA3] gi|314930576|gb|EFS94407.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL067PA1] gi|314954467|gb|EFS98873.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL027PA1] gi|314957541|gb|EFT01644.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL002PA1] gi|314974096|gb|EFT18192.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA1] gi|314976613|gb|EFT20708.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL045PA1] gi|314984276|gb|EFT28368.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL005PA1] gi|315079612|gb|EFT51605.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL053PA2] gi|315081156|gb|EFT53132.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL078PA1] gi|315095440|gb|EFT67416.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL038PA1] gi|315099117|gb|EFT71093.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL059PA2] gi|315100398|gb|EFT72374.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL046PA1] gi|315106907|gb|EFT78883.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA1] gi|315109097|gb|EFT81073.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL030PA2] gi|327328501|gb|EGE70263.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL096PA2] gi|327444288|gb|EGE90942.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA2] gi|327444832|gb|EGE91486.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL043PA1] gi|327452092|gb|EGE98746.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL092PA1] gi|327454870|gb|EGF01525.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA3] gi|327457846|gb|EGF04501.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL083PA2] gi|328755298|gb|EGF68914.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL087PA1] gi|328758221|gb|EGF71837.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL025PA2] gi|328759936|gb|EGF73520.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL099PA1] Length = 299 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 114/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|333027094|ref|ZP_08455158.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] gi|332746946|gb|EGJ77387.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces sp. Tu6071] Length = 271 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 106/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRADSPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT +D R Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGW-------SDLRGAT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L++ K LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 106 ACALIDDDAKAAVH--ARLGPDPLREADDGEAAWARISRSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEVLFRHGIDPARPGRSLSRAE------WDALWADLRVLMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|254479820|ref|ZP_05093068.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214039382|gb|EEB80041.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 273 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 107/294 (36%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I + V+ TV I LR HFS +G ++IDV R K L Sbjct: 1 MPEGPEIRIAADTIANVLVGNTVETIRFGLPRLR-----HFSKQLKGHRVIDVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + SI H + G + + K P+ N L +D Sbjct: 56 LTHFDHGYSIYSHNQLYGVWKVCSG-----HKLPKSNRSMRILLQTETHSAVLYSASDIS 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + T ++P LR LGP+ + + + + + L L+Q + Sbjct: 111 ------VWPTEELAEHPFLRKLGPDIMNPALEWREIAARLQDPRFERRELAALYLDQSFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GN E A L P +K L + L KL + ++ + D G ++ Sbjct: 165 AGNGNYLRSEVTHHAGLHPKQKPCELTRAQ------LGKLARSTLEISRRSYDTRGITIT 218 Query: 238 DYVH---IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F V+G+ PC S C I+ R ++C CQ Sbjct: 219 PRLSKTLEKRGVARGSRRFYVFGRDDLPCYS-CSTPIKYSEINSRRLYHCPQCQ 271 >gi|313813496|gb|EFS51210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL025PA1] gi|327334147|gb|EGE75861.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL097PA1] Length = 299 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 114/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDSAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|302539955|ref|ZP_07292297.1| DNA-formamidopyrimidine glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457573|gb|EFL20666.1| DNA-formamidopyrimidine glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 262 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + + LR G++ R K+ Sbjct: 1 MPELPDVEGFRRTLASCAQGHRIERVEVADPAVLRGVTAQRLKRELEGRRFAAPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L+ G ++I+H GM+G + + V ++L + +++ Y+D Sbjct: 61 LIAP-AGGPTLILHFGMTGGLVCRSEGDP----PERFGRVVLTLDDG-----HQLRYHDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L T L GP+ S L + +K L +Q +VAG Sbjct: 111 RKLRGLWLATTDADVD-RILGEQGPDAL--SLGRAELDSLLEGRRGRVKATLTDQSVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+ E LWRA++ P +T L D L +L ++ VL ++ AG R Sbjct: 168 LGNLLGDEILWRARVHPKSRTSDLGP------DELRRLHTALRGVLSTSVRAGQVPPR-- 219 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + +P CG+ +RR AGR++ +C CQ Sbjct: 220 ----------ASWLTGHRDDPDPHCPRCGRPLRRGKIAGRTSTWCPRCQ 258 >gi|294815478|ref|ZP_06774121.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|326443828|ref|ZP_08218562.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] gi|294328077|gb|EFG09720.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 267 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 38/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T L P + +A G+++++V R K+L Sbjct: 1 MPEGDTVWRTAKRLDTALAGRELTRSELR-------VPRYATADLTGRRVLEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + +P P+H + T++ YR+ Sbjct: 54 LARFEGGLTLHSHLRMDGAWRVFPAG-ERPRGGPEHQIRAVLGTSSHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ + + L ALL+Q+ +AG Sbjct: 107 --PVLELLRTTDEQKV--VGHLGPDLLGPDWDPAAARERLLADPSRPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y CE + A ++P L + ++L++E + + A GS Sbjct: 163 IGNVYKCELAFLAGVTPWLPVGELPEGVLERLLATAHRLLEENRDAVERRTTAAGS---- 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + V+G+ G PC CG +RR R +++C CQ Sbjct: 219 ---------RAGSRLHVHGRAGRPC-PRCGTPVRRSGPGRAGDERISYWCPGCQ 262 >gi|225020056|ref|ZP_03709248.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] gi|224947191|gb|EEG28400.1| hypothetical protein CORMATOL_00052 [Corynebacterium matruchotii ATCC 33806] Length = 275 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 26/289 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + T T + RFD + G+ ++ K+L IE Sbjct: 8 MPEGHVIHRLAQHLNREFTDTSPIVTSPQGRFDAQ---ARTLDGQPYLESDAYGKHLFIE 64 Query: 64 LE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + I +HLG+ GS E + K + + + +T R Sbjct: 65 FDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATDTIAANL-------R 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + + LG +P + + + +K N ++ + L++Q + G+ Sbjct: 111 GPQWCRLIT--AEEKAVAVDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPGV 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P + + D++ + + ++ ID + + + + Sbjct: 169 GNIYRAETLFRLGIDPFSSGKD-ADFDAIWADLVQLMAEGVKAGRIDTVRPEHTP--EAM 225 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + G+ C CG I V GR+ F+C CQK Sbjct: 226 NRPPRVDDHGGEVYVYRRAGQKCY-ICGTPISEQVMEGRNLFWCPTCQK 273 >gi|315503877|ref|YP_004082764.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Micromonospora sp. L5] gi|315410496|gb|ADU08613.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Micromonospora sp. L5] Length = 269 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 106/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDKVHADSPQGRF---AEGAARLSGTVLDGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G L++ VHLG+ G F P+ + + L ++ + + R Sbjct: 58 YAGELTLHVHLGLYGKFADGPGEPPAPV-----GQLRLRLHSDRHWLEL-------RGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ LGP+P + + + + L LL+Q +VAG G I Sbjct: 106 ACELLTPPEVAALRD--RLGPDPLRADADPDRAYARIRRSPTPLAALLLDQSVVAGTGLI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 +V EAL+RA L P+ R L +L ++ ++ A++ G + Sbjct: 164 FVTEALFRAGLPPLLPGRELTPAG------WAELWADLVTLMTRAVERGRIDTVRDADLP 217 Query: 244 GSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G VY + G PC CG + R AGR+ ++C CQ Sbjct: 218 EATGRAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYWCPTCQ 267 >gi|330466398|ref|YP_004404141.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] gi|328809369|gb|AEB43541.1| DNA-(apurinic or apyrimidinic site) lyase [Verrucosispora maris AB-18-032] Length = 264 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 115/294 (39%), Gaps = 40/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + G ++ D + R K+L Sbjct: 1 MPEGDTVWNTARVLARALTGARLTGSDFR-------VPQLATTDLTGWRVTDCASRGKHL 53 Query: 61 LIELE-----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LI L+ + ++ HL M G++ + + + P H + T + Y + Sbjct: 54 LIRLDEPTGAAHWTLHSHLRMDGTWRV-YAPGERWSARPAHLIRVVLSTATSTAVGYHL- 111 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQ 174 + LV T+ + + + LGP+ ++ + + + + ALL+Q Sbjct: 112 -------HEVALVPTAEE--HRLVGHLGPDLLGTDWDPQEAVRRLADRPAESIAEALLDQ 162 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + +AG+GN+Y CE L+ ++P + + G + + L+ + + Sbjct: 163 RNLAGVGNLYKCELLFLRGINPRTRVADVPDLAGLIT-LAHDLLAANRGRWTQS------ 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+ Q + VYG+ +PC CG IR+ R T++C CQ Sbjct: 216 -------TTGSLRRGQTS-YVYGRRAQPC-RRCGTAIRKEELGERVTYWCPRCQ 260 >gi|289426532|ref|ZP_06428275.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|295131139|ref|YP_003581802.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] gi|289153260|gb|EFD01978.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK187] gi|291375877|gb|ADD99731.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes SK137] Length = 272 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 115/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVD 57 Query: 64 LEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 58 FDNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L+ T+GP+P + + + + + + + LL+Q++ AG+ Sbjct: 104 GPQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P + + + + ++ ++ +++G Sbjct: 162 GNIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPE 215 Query: 241 HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 216 HTPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|302869641|ref|YP_003838278.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] gi|302572500|gb|ADL48702.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Micromonospora aurantiaca ATCC 27029] Length = 269 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 108/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDKVHADSPQGRF---AEGAARLSGTVLDGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G L++ VHLG+ G F P+ + + L ++ + + R Sbjct: 58 YAGELTLHVHLGLYGKFADGPGEPPAPV-----GQLRLRLHSDRHWLEL-------RGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ LGP+P + + + + L LL+Q +VAG G I Sbjct: 106 ACELLTPPEVAALRD--RLGPDPLRADADPDRAYARIRRSPTPLAALLLDQSVVAGTGLI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGT--PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 +V EAL+RA L P+ R L D++ + + +++ ID + + L + Sbjct: 164 FVTEALFRAGLPPLLPGRELTPAGWAELWADLVMLMTRAVERGRIDTVRD--ADLPEVTG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG + R AGR+ ++C CQ Sbjct: 222 RAPRVDRHGGEVYVYRRPGAPC-HVCGTPVSRGALAGRNLYWCPTCQ 267 >gi|302866006|ref|YP_003834643.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315502566|ref|YP_004081453.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] gi|302568865|gb|ADL45067.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora aurantiaca ATCC 27029] gi|315409185|gb|ADU07302.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. L5] Length = 273 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 105/296 (35%), Gaps = 45/296 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + G + + + R K+L Sbjct: 1 MPEGDTVWNTARVLQRALAGARLTGSDFR-------VPQLATTDLTGWTVRESASRGKHL 53 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ L ++ HL M G++ + + P H + + Y + Sbjct: 54 LLRLTRTDAEPWTLHSHLRMDGAWR-AYAPGERWSGRPAHLIRVVLRSPAAVAVGYHL-- 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQK 175 + LV T+ + + LGP+ ++A + + + ALL+Q+ Sbjct: 111 ------HELALVPTAEEE--SLVGHLGPDLLGPDWDADEAVRRLAADPDRTIGEALLDQR 162 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTR---SLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +AG+GN+Y CE L+ +SP L + +L + + G Sbjct: 163 NLAGVGNLYKCEVLFLRGVSPWTPVGAVPDLTGTVALAQRLLAANRGRWTQSTTGVLHRG 222 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+S VYG+ +PC CG IR+ R T++C CQ Sbjct: 223 GTS------------------YVYGRRAQPC-RRCGTAIRKEELGERVTYWCPACQ 259 >gi|257055240|ref|YP_003133072.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] gi|256585112|gb|ACU96245.1| formamidopyrimidine-DNA glycosylase [Saccharomonospora viridis DSM 43017] Length = 270 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 113/291 (38%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLARLHRRRYVGAPVEVSSPQGRFSTE---AAVIDGHVMTAAEAFGKHLFHY 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G+F A+P+ V + L T+ D R Sbjct: 58 YGSQGIVHVHLGLYGTFTEYPLPVAEPV-----GQVRMRLVGRTHW-------TDLRGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P + + + + + L L++Q ++AG+GN+ Sbjct: 106 RCELLTPPQAEA--LIARLGPDPLRDDADPQEAWERISRSRAPLAGLLMDQSVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P+ RSL + L ++++++ + + G + H Sbjct: 164 YRAEVLYRQRIDPMLPGRSLSRRR------WDALWADLRQLMREGVRLGRIDTVEPEHRP 217 Query: 244 GSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +G VY +T +PCL CG + + AGR+ ++C CQ Sbjct: 218 EVMGRAPRRDRHGGEVYVYRRTHKPCL-VCGTPVAQTKLAGRNLYWCPTCQ 267 >gi|318060115|ref|ZP_07978838.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actG] gi|318076316|ref|ZP_07983648.1| putative DNA repair hydrolase [Streptomyces sp. SA3_actF] Length = 271 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 106/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + +F +A G + K+L + Sbjct: 1 MPEGHTLHRLAADHDQRFGGRPVRAASPQGKFAAS---AALLDGAVLDGAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G + P + + + LT +D R Sbjct: 58 FGPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGW-------SDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L++ K LGP+P + + + + + + L++QKIVAG+GN+ Sbjct: 106 ACALIDDEAKAAVH--ARLGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R RSL + L +++ ++ + + G H Sbjct: 164 YRAEVLFRHGIDPARPGRSLSRAE------WDALWADLRVLMREGVRLGRIDTVRPEHTP 217 Query: 244 GSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 218 EAMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 267 >gi|239994890|ref|ZP_04715414.1| endonuclease VIII [Alteromonas macleodii ATCC 27126] Length = 273 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 118/295 (40%), Gaps = 31/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K++ + + L+ ++ G+K++ + R K L Sbjct: 1 MPEGPEIRRAADKVEAVIKDIPLEKVEFGLAQLK-----PYAKQLEGEKVLRMETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LS+ H + G + +C + + + L T+ ++Y+ Sbjct: 56 ITHFSNGLSMYSHNQLYGVWH----TCKRNRMPDTTRQLRVGLHTETH---SAILYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + + T +++P L+ +GP+ +NS + + K N L L+Q+ + Sbjct: 109 ----ISIWPTQTIHEHPFLQRVGPDVLNNSVTEELVLERLRSKAFYNRALSGLYLDQRFM 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS-- 235 AG+GN E L+ A + P K L L L + + + GG + Sbjct: 165 AGLGNYLRSEILFAAGVHPSLKPSQLADEQ------LRSLAHHTLTICKRSYETGGYTVY 218 Query: 236 --LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 LR+ + G F V+ + +PC C I+R GR ++C+ CQ Sbjct: 219 TELREVLEAKGVNFE-GTRFMVFDREEQPC-RICATPIKRQTYNGRRFYWCSRCQ 271 >gi|305681732|ref|ZP_07404538.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658892|gb|EFM48393.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Corynebacterium matruchotii ATCC 14266] Length = 268 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 26/289 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + T T + RFD + G+ ++ K+L IE Sbjct: 1 MPEGHVIHRLAQHLNREFTDTSPIVTSPQGRFDAQ---ARTLDGQPYLESDAYGKHLFIE 57 Query: 64 LE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + I +HLG+ GS E + K + + + NT R Sbjct: 58 FDVSQPERIIYIHLGLIGSLHFEDPAETK-------GQIRLHMATNTIAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + + LG +P + + + +K N ++ + L++Q + G+ Sbjct: 104 GPQWCRLIT--AEEKAVAVDKLGADPLRADADPKPIKEKVNKSNRSIASLLMDQSLFPGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R + P + + D++ + + ++ ID + + + + Sbjct: 162 GNIYRAETLFRLGIDPFSSGKD-ADFDAIWADLVQLMAEGVKAGRIDTVRPEHTP--EAM 218 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + G+ C CG I V GR+ F+C CQK Sbjct: 219 NRPPRVDDHGGEVYVYRRAGQKCY-ICGTPINEQVMEGRNLFWCPTCQK 266 >gi|322434760|ref|YP_004216972.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] gi|321162487|gb|ADW68192.1| DNA-(apurinic or apyrimidinic site) lyase [Acidobacterium sp. MP5ACTX9] Length = 307 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 24/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L ++ +T L + G+ + V R K+L Sbjct: 1 MPEGDTIYRSARALGKALEGQIITA---FDTGLATLASVNDDKPLVGRTVDKVESRGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ + T K V +S V +N P Sbjct: 58 LIHFSGDLILVTHMLMSGSWHLYRTG-EKWWMGRNRMRVALSTEGWQ-----AVAFNVP- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-----KKNSNLKNALLNQK 175 + + + LGP+ F + ++ + LLNQ+ Sbjct: 111 ---IAEFHTARSLERSSQVPKLGPDVLAEGFTVEQGVARLREYGQQHPDAEIAVVLLNQR 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN+Y E + A ++P R ++ ++ + + ++ ++D G + Sbjct: 168 VLAGLGNVYKSEVAFAAGVNPFRAMSTITDQEMDI--MVDRSHKWLKVNVLDGAGDGIVT 225 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + G ++ VYG+ G+ C CG +++ Q RST++C CQ Sbjct: 226 YSGNRRTT-NSGNREDRLWVYGRQGQEC-RRCGALVQMRKQGEQARSTYWCPACQ 278 >gi|325916140|ref|ZP_08178427.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537684|gb|EGD09393.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 177 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 99/176 (56%), Gaps = 9/176 (5%) Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + +NDPRRFG L+ S Q+ L LGPEP +F YL + + +K L++ Sbjct: 11 LRFNDPRRFGC--LLWQSDTQQHELLAALGPEPLSQAFTGDYLYALSRGRRAAVKTFLMD 68 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +V G+GNIY E+L RA +SP+R+ + + L ++ +L AI GG Sbjct: 69 QAVVVGVGNIYAAESLHRAGISPLREAGKVS------LERYRSLATAVKDILGYAIQRGG 122 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R+T +C +CQ+ Sbjct: 123 TTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQRATVWCGHCQR 177 >gi|238060842|ref|ZP_04605551.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] gi|237882653|gb|EEP71481.1| DNA-(apurinic or apyrimidinic site) lyase [Micromonospora sp. ATCC 39149] Length = 283 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 70/298 (23%), Positives = 114/298 (38%), Gaps = 30/298 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G + K+LL Sbjct: 1 MPEGHTIHRLAARHAELFAGDRVRAASPQGRF---AEGAALLSGTVLEGTEAYGKHLLHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV-------IY 116 G L++ VHLG+ G F + P V + LT++ ++ + Sbjct: 58 HAGGLTLHVHLGLYGRF-----ADGPGEPPPPVGQVRLRLTSDGSSTGRTGSESPDDRHW 112 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 D R +L+ LGP+P + + + + L LL+Q + Sbjct: 113 LDLRGPNACELLTPPEVAALRD--RLGPDPLRADADPARAYARISRSPTPLAALLLDQSV 170 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAG G I+V EAL+RA LSP+ R L +L ++ +++ A++ G Sbjct: 171 VAGTGLIFVTEALFRAGLSPLLPGRELAPAR------WRELWIDLVELMTRAVEVGRIDT 224 Query: 237 RDYVHIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 H+ + G VY + G+PC CG +RR AGR+ ++C CQ Sbjct: 225 VRDAHLPEATGRAPRVDRHGGEVYVYRRPGQPC-HVCGDEVRRGALAGRNLYWCPTCQ 281 >gi|302519076|ref|ZP_07271418.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302427971|gb|EFK99786.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 273 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 105/290 (36%), Gaps = 30/290 (10%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE + R + + +F +A G + K+L + Sbjct: 4 PEGHTLHRLAADHDQRFGGRPVRAASPQGKFAAS---AALLDGAVLDGAEAHGKHLFLGF 60 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G + P + + + LT +D R Sbjct: 61 GPLGWVHIHLGLFGKV-----AQGPGTPPPPTDTIRLRLTGPGGW-------SDLRGPTA 108 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 L++ K LGP+P + + + + + + L++QKIVAG+GN+Y Sbjct: 109 CALIDDDAKAAVH--ARLGPDPLREADDGEAAWTRISRSRTTIAALLMDQKIVAGVGNVY 166 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+R + P R RSL + L +++ ++ + + G H Sbjct: 167 RAEVLFRHGIDPARPGRSLSRAE------WDALWADLRVLMREGVRLGRIDTVRPEHTPE 220 Query: 245 SIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + PCL CG IR AGR+ F+C CQ Sbjct: 221 AMGRPPRRDDHGGEVYVYRRAHLPCL-ICGTEIRTRELAGRNLFWCPRCQ 269 >gi|282854733|ref|ZP_06264068.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] gi|282582315|gb|EFB87697.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes J139] Length = 272 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 115/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF +A G + K+L+++ Sbjct: 1 MPEGHVIHRLANAIDSAFAGSRVEVTSPQGRF---AESAAMLDGTVLTSAQAWGKHLVVD 57 Query: 64 LEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G + T P V + +T+ V D R Sbjct: 58 FDNHRPDHLLHIHLGLIGKLAVGPT-------VPVVGQVRLRITDG-------VTAADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L+ T+GP+P + ++ + + + + + LL+Q++ AG+ Sbjct: 104 GPQTCELINDDEWGTVA--ATIGPDPIRDDADSDVAWDKVRRSSRRISDVLLDQRVAAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R ++ P + + + + ++ ++ +++G Sbjct: 162 GNIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPE 215 Query: 241 HIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 216 HTPEAMGRPPRVDRHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 269 >gi|330469897|ref|YP_004407640.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] gi|328812868|gb|AEB47040.1| DNA glycosylase/ap lyase, h2th DNA-binding protein [Verrucosispora maris AB-18-032] Length = 270 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 104/286 (36%), Gaps = 22/286 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R + + RF +A G + K+LL Sbjct: 4 PEGHTIHRLAARHAELFVGDKVLATSPQGRF---AEGAALLSGSVLEQTKAYGKHLLHHY 60 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 G + VHLG+ G H +P+ + + L + + D R Sbjct: 61 AGERILHVHLGLYGKVTDGHGEPPEPV-----GQIRLRLATDRHW-------LDLRGPTA 108 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 +L+ LGP+P + + + ++ L LL+Q +VAG G I+ Sbjct: 109 CELLTPPEAAALR--ARLGPDPLRADADPQRAYARISRSSTPLAALLLDQSVVAGTGLIF 166 Query: 185 VCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 V EAL+RA LSP R L + + D++ + + ID + A L + + Sbjct: 167 VTEALFRAGLSPTLPGRELTRAGWDALWVDLVELMTLAVGTGRIDTVRA--EHLPEAMGR 224 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + +PC C I R A R+ ++C CQ Sbjct: 225 PARVDRHGGEVYVYRRPDQPC-HVCATPISRGTIAARNLYWCPTCQ 269 >gi|296139126|ref|YP_003646369.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] gi|296027260|gb|ADG78030.1| DNA-(apurinic or apyrimidinic site) lyase [Tsukamurella paurometabola DSM 20162] Length = 267 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 111/287 (38%), Gaps = 23/287 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF + G++ + K+L Sbjct: 1 MPEGHTLHRLALDHDRRFGGETVRVASPQGRFAAE---AKRLDGREFLGADAWGKHLWHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G L++ VHLG+ GSF P V + + + D R Sbjct: 58 YDGGLTVHVHLGLYGSFADFELLDGAPPAPV--GQVRMRIVGPRDG-------TDLRGPT 108 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LV + L LGP+P + + + + L++QK+VAG+GN+ Sbjct: 109 ACHLVSEEQIDEV--LARLGPDPLRADADPDPAWRRISRSRRPIGALLMDQKVVAGVGNV 166 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+RA L P R+ R+L + + + ++ ++ ++ G + Sbjct: 167 YRAEVLYRAGLDPHREGRALGREDFDG------IWADLVALMPIGVERGRMHVVRAEDDH 220 Query: 244 GSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GEPC C +R V R+ ++C CQ Sbjct: 221 GAPSYAPDRPRTYVYRRAGEPC-RVCRTPVRTEVMEARNLYWCPTCQ 266 >gi|302537302|ref|ZP_07289644.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302446197|gb|EFL18013.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 270 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 25/260 (9%) Query: 30 RKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 +LR P +A G+ ++DV+ R K+LL LEG L++ HLGM G++ + K Sbjct: 25 HADLR--VPRFATADLTGRTVLDVTPRGKHLLTRLEGGLTLHSHLGMDGAWRLF-APGEK 81 Query: 90 PIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 P H + T T YR+ ++L+ T+ + + + LGP+ Sbjct: 82 WRGGPSHEIRAVLSTAGTTAVGYRL--------PVLELLRTADEAR--AVGHLGPDLLGP 131 Query: 150 SFNAIYLTH-QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 ++ L ALL+Q+ +AGIGNIY CE + A+++P +L Sbjct: 132 DWDEARAAANLLADPGRPLGEALLDQRNLAGIGNIYKCELCFLAQVTPWTPVGALPD--- 188 Query: 209 TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCG 268 P L ++ Q++L GG+ G VYG+ PCL CG Sbjct: 189 -PAATLPRIAAAAQRLLAANTGHGGARNTTGSRRPG------WGLFVYGRAHRPCL-RCG 240 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 +R Q R T++C CQ Sbjct: 241 TPVREAPQDDRPTYWCPRCQ 260 >gi|297160503|gb|ADI10215.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces bingchenggensis BCW-1] Length = 269 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 106/288 (36%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G+ + K+L + Sbjct: 1 MPEGHTIHRLAADHSELFGGRPVRASSPQGKF---ADGAALIDGQVLEHAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G + P + V + L Y D R Sbjct: 58 FPATGWVHVHLGLFGKVGLGPAPAPPPTET-----VRLRLAAKE-------AYADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P S + + + +++ LL+QK+VAG+GN+ Sbjct: 106 ACALITDDEKQAVHD--RLGPDPLRPSDDGDRAWARVSRSRTSVAALLLDQKVVAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R L + D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRHGVDPYRAGRDLSRAEWDAIWADLVALMREGVRNNRIDTVRPEHTP--EAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + +PC CG +R A R+ F+C CQ+ Sbjct: 222 RPPRVDDHGGEVYVYRRHRQPC-HICGGEVRTADLANRNLFWCPNCQR 268 >gi|320588680|gb|EFX01148.1| formamidopyrimidine-DNA glycosylase [Grosmannia clavigera kw1407] Length = 365 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 121/315 (38%), Gaps = 44/315 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E I L + + + F F+A+ GKK++ + Sbjct: 1 MPEIAEAARIVHFLRKHLVGKQIKKAAAIDDSNVFGKAGTTGATFAASVLGKKVLSAGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH------------TSCAKPIKNPQHNHVTISLT 104 KY I L+ ++H GM+G I+ + P+ + Sbjct: 61 GKYFWIVLDSQPHPVMHFGMTGWIHIKGMRTAYTNYYNKMKPGDADLWPPRFWKFHLQAE 120 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQF 160 + K + + DPRRFG + L++ Q+ PL GP+P ++ F ++ Sbjct: 121 ADGAADKVELAFTDPRRFGRVRLIDCPGDRIRQFSPLVENGPDPVVDADIFTESFVRDTM 180 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 +++ +K LL+Q ++GIGN E L++A+L P + + +L Sbjct: 181 QRRHVPIKALLLDQAFISGIGNWVGDEVLFQARLHPEQYCDEFDGAQ------VKQLYTS 234 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE------PCLSNCGQMIRRI 274 I V A+D G S R F + + + + G+ P L G+ + + Sbjct: 235 ICHVCRTAVDLLGDSDR-----------FPDDWLFHYRWGKGSKGAVPQLPG-GEKLSFL 282 Query: 275 VQAGRSTFYCTYCQK 289 GR++ + QK Sbjct: 283 TVGGRTSCFAPSLQK 297 >gi|118618996|ref|YP_907328.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571106|gb|ABL05857.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 268 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 111/287 (38%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + +F + A G+ + S K+L Sbjct: 1 MPEGHTLHRLARLHQRRFAGAPVVVSSPQGKFADS---AGAVDGRVLRAASAWGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ G+F S + + +P V + + D R Sbjct: 58 YAGGPVVHVHLGLYGAFTEWVRSAGELLPDPV-GQVRMRMVGAEYG-------TDLRGPT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ + L LGP+P + + + K + L++QK++AG+GN+ Sbjct: 110 VCEVIDDAQVADV--LARLGPDPLRKDADPSWAWARIAKSRRPIGALLMDQKVMAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R ++ P R + + + + ++ ++ G + H Sbjct: 168 YRSELLFRHRIDPYRSGQRITEAEFSAA------WTDLVALMKVGSRGGKIVVVRPEHDH 221 Query: 244 GSIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + G+PC CG + V GR+ F+ CQ Sbjct: 222 GAPSYAAGRPRTYVYRRAGDPC-RVCGATVGTAVLEGRNVFWRPSCQ 267 >gi|290956988|ref|YP_003488170.1| DNA glycosylase [Streptomyces scabiei 87.22] gi|260646514|emb|CBG69611.1| putative DNA glycosylase [Streptomyces scabiei 87.22] Length = 284 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 41/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + L R +LR P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGQ-----MLSRSDLR--VPKYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + S + P H I T YR+ Sbjct: 54 LTRVEGGLTLHSHLRMDGSWKV-YASGERWRGGPTHQIRAILGTTERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L + L ALL+Q+ +AG Sbjct: 107 --PVLELMRTADE--HRAVGHLGPDLLGPDWDPELALANLLGDPGRALGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y E + +++P +L + D+ K+++ + I Sbjct: 163 IGNVYKSELCFLLRVTPWIPVGALPAEVAARLPDLAKKVLEANRDRPIRN---------- 212 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G+ ++ VYG+ PCL C +R Q R T++C CQ Sbjct: 213 ------TTGHRRHDLFVYGRAPRPCL-RCHTPVRAADQGDGSRERPTYWCPTCQ 259 >gi|302529039|ref|ZP_07281381.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302437934|gb|EFL09750.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 269 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 109/291 (37%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF + G+ ++ K+L Sbjct: 1 MPEGHTLHRLARLHQRRYAGGPVAVSSPQGRFAAE---AGKLDGQVLVSAEAYGKHLFHH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ VHLG+ G+F P+ V + L T+ D R Sbjct: 58 YGPLGTVHVHLGLYGTFGEAPLPETAPV-----GQVRMRLVGRTHW-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ + LGP+P + + + + L++Q ++AG+GN+ Sbjct: 106 RCELLDPAQVDAIK--ARLGPDPLRRDAKPDRAWERISRSRTTIAALLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP+ RSL + + + ++ ++ + G H+ Sbjct: 164 YRAEVLFRHGISPMVPGRSLDRA------LWDAMWADLVTLMRAGVRVGRIDTVAPEHLP 217 Query: 244 GSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + G PCL CG + + A R+ ++C CQ Sbjct: 218 AAMGRAPREDRHGGEVYVYRRAGMPCL-ICGTPVAQKELAARNLYWCPACQ 267 >gi|299755916|ref|XP_001828971.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] gi|298411439|gb|EAU92978.2| AtMMH-1 [Coprinopsis cinerea okayama7#130] Length = 370 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 117/316 (37%), Gaps = 46/316 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPELPEV+ L V K +T + + + F F + + D R K Sbjct: 1 MPELPEVQRAVNTLKHVAKGKRITKVVTYPDPIVFNATTNEEFGKELENRTVSDAKRYGK 60 Query: 59 YLLIELEG-NLSIIVHLGMSGSFIIEHTSC----------AKPIKNPQHNHVTISLTNNT 107 ++L+G ++H GM+G ++ ++ P+ + L N T Sbjct: 61 VFYLDLDGKGKKPVLHFGMTGMLHVKGVKPMHYKEAPRKDSEDTWPPRFCKFILHLQNPT 120 Query: 108 NT----KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 + + V + D RR + L + ++ + P+ LG +P + + + K+ Sbjct: 121 GSSNGEPETEVAFIDARRLARIRLCTSPMEER--PISELGFDPLLSMPSLETFSRTVLKR 178 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + +K LL+Q AG+GN E L+ A++ P ++ +L L L I Sbjct: 179 SCPIKALLLDQSFSAGVGNWVADEVLYHARIHPEQRCNTLTTEQ------LKNLHHCIVY 232 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK--TGEPCLSN--------CGQMIRR 273 V A+D +D F + + G+ S I+ Sbjct: 233 VCQTAVD-----------VDADHKLFPENWLFGHRWNKGKKSFSVKPLMLPSGSKATIKW 281 Query: 274 IVQAGRSTFYCTYCQK 289 I GR++ Y Q+ Sbjct: 282 ITVGGRTSAYVPELQR 297 >gi|225682725|gb|EEH21009.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb03] Length = 392 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 119/315 (37%), Gaps = 38/315 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ P ++ + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDREDEPWPSNFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP--ADNSFNAIYLTHQFH 161 + K + D RR G + LV+ +Y PL+ GP+P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGTDIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIY-------VCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 K +K LL+Q ++GIGN E L+ AK+ P + + +L ++ + Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGLASAIIRDEILYHAKIHPEQYSNTLQESQ------I 234 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L I V ++ G+S + F + +S GK G+ I I Sbjct: 235 EQLYSAINYVCSTSVGLLGNSEEFPSNWL-----FSHRWS-KGKANHSHQLPNGEKIVFI 288 Query: 275 VQAGRSTFYCTYCQK 289 GR++ QK Sbjct: 289 TVGGRTSAIVPAIQK 303 >gi|159901996|gb|ABX10726.1| DNA glycosylase/endonuclease [uncultured planctomycete 13FN] Length = 265 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 108/292 (36%), Gaps = 35/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + NL V+ + ++ L + V R K+L Sbjct: 1 MPEGDTIHRAAANLRKVLDRQKIVSASGRQEVLSVADLAE-------ATVTGVEARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + +L + H+GM+GS+ I + + + + L T + V+ P+ Sbjct: 54 LIHFDSDLVVHSHMGMTGSWHIYRLTDSWQKPD---TQAVLVL----KTAAWCVVCFTPK 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 ++V + L LGP+ + + ++ + + L+NQ +V+G Sbjct: 107 LL---EIVSETKLRWNSWLTKLGPDILGPPISDDVFLSRMRSQSQHAIGEVLMNQNVVSG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E L + P L L L ++ ++ G + R Sbjct: 164 IGNVYKSEILHLEHIHPETLVAVLDDA------ALLSLRDRAVFLMKRNLNNGARTTRFR 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQK 289 + VYG+ G+ CL CG +I RST++C CQK Sbjct: 218 GEA--------SRLWVYGRRGQHCLK-CGTIILMQRHGDNARSTYFCPACQK 260 >gi|329894679|ref|ZP_08270483.1| Endonuclease VIII [gamma proteobacterium IMCC3088] gi|328922841|gb|EGG30171.1| Endonuclease VIII [gamma proteobacterium IMCC3088] Length = 275 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 105/294 (35%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + + L F G ++ D+ R K L Sbjct: 1 MPEGPEIRRAADRIAKVVAGRVIEHVEFGLPRL-----QEFEGMLSGLRVTDLETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +L++ H + G + + K + P+ N + +D Sbjct: 56 LTHFDNDLTLYSHNQLYGRWYVV-----KRDRMPKTNRSLRVALHTATHSAVLYSASD-- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ + L +GP+ + Q + L + L+Q + Sbjct: 109 ----IEVLTADELITHKFLSRIGPDILSKDLVPQRVVEQLEHAKFQGRKLAHLYLDQGFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A+++P + + L L + + A G + Sbjct: 165 AGVGNYLRSEILFEARVNPNLRPKDLSPAQR------MALGEATLDISKRAYKTAGITND 218 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G Q V+ + G PC CG + ++ +GR +YC CQ Sbjct: 219 LERVALLKEQGVKRSQFRHHVFARQGRPCYE-CGTKVTKVDLSGRRLYYCAMCQ 271 >gi|314963764|gb|EFT07864.1| formamidopyrimidine-DNA glycosylase protein [Propionibacterium acnes HL082PA1] Length = 299 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDAGPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|320105899|ref|YP_004181489.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] gi|319924420|gb|ADV81495.1| DNA-(apurinic or apyrimidinic site) lyase [Terriglobus saanensis SP1PR4] Length = 301 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 115/297 (38%), Gaps = 28/297 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L V++ TVT L + G+ I V R K+L Sbjct: 1 MPEGDTLFRAARALAKVLEGRTVTAFETAYAKL---ASVNDDRPVLGRVIEKVEARGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ I T + +P+ + V Sbjct: 58 LIHFSGDLILVTHMLMSGSWHIYRTG--EKWWSPRSAMRVRVAVEGVEAVAFNVPVA--- 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-----NLKNALLNQK 175 + T+ + + LGP+ S++ K+ + N LLNQ+ Sbjct: 113 -----EFHTTASLKRDAMVEKLGPDVLSASYSGDVGLVALQKRMVSHPDDEIANVLLNQR 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AG+GN+Y E + A++ P R R+L + + + + + +D G Sbjct: 168 VLAGLGNVYKSEVCFAARVHPFRAMRTLTVDEMQQMADV-----SQRYMQANVLDGAGDG 222 Query: 236 LRDYV--HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFYCTYCQ 288 + Y + VYG+ G C CG ++ R+ RST++C CQ Sbjct: 223 IVTYSGNRRTTRSANAADRLWVYGRRGLEC-RRCGGIVEMRKQGVGARSTYWCPDCQ 278 >gi|297202801|ref|ZP_06920198.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] gi|197713889|gb|EDY57923.1| formamidopyrimidine-DNA glycosylase [Streptomyces sviceus ATCC 29083] Length = 284 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 41/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + +T L P + +A G++++DV+ R K+L Sbjct: 1 MPEGDTVWQAAKRLHTALADKVLTRSDLR-------VPKYATADLTGRRVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + + P H I + YR+ Sbjct: 54 LTRIEGGLTLHSHLRMDGSWKV-YAENQRWTGGPTHQIRAILANTDRTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L + L ALL+Q+ +AG Sbjct: 107 --PVLELLRTTDE--HKAVGHLGPDLLGPDWDPERALANLLRDPARPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y E + +P +L + L KL++ + + + Sbjct: 163 IGNVYKSELCFLLGATPWLPVGALPADRAAQLPALAKKLLEANRDRPVRS---------- 212 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL C +R Q R T++C CQ Sbjct: 213 ------TTGRRGQDLFVYGRAPRPCL-RCRTSLRVADQGDGSRERPTYWCPTCQ 259 >gi|294631793|ref|ZP_06710353.1| endonuclease VIII [Streptomyces sp. e14] gi|292835126|gb|EFF93475.1| endonuclease VIII [Streptomyces sp. e14] Length = 281 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 114/294 (38%), Gaps = 39/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ +++ R K+L Sbjct: 1 MPEGDTVWQAARRLHEALAGRVLTRSDFR-------VPQYATVDLSGRTVLNTIARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + + P H + T YR+ Sbjct: 54 LTRVEGGLTLHTHLRMEGAWKV-YGDGERWKGGPAHQIRVVLATAERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ TS + + + LGP+ ++ L + L ALL+Q+ +AG Sbjct: 107 --PVLELLRTSEEDR--TVSHLGPDLLGPDWDPDLALANLLADPARQLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + ++P +L + +L K + E + + Sbjct: 163 IGNVYKSELCFLLGVTPWLPVGALPADRAAKLPLLAKKLLEANRDRV------------- 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + + G VYG+ PCL CG +R Q R T++C CQK Sbjct: 210 --VRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGTQERPTYWCPTCQK 260 >gi|327446321|gb|EGE92975.1| putative formamidopyrimidine-DNA glycosylase [Propionibacterium acnes HL013PA2] Length = 299 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRGEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|284989429|ref|YP_003407983.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] gi|284062674|gb|ADB73612.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] Length = 269 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 111/285 (38%), Gaps = 18/285 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + RF +A + + +V+ K+L Sbjct: 1 MPEGHTLHRLARDQSLAFAGRPVHVTSPQGRF---AAGAALLDDRVLDEVTAHGKHLFAC 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 G + VHLG+ GS+ + P + + ++ D R Sbjct: 58 F-GADILHVHLGLYGSYTAGTGTPPPP-------RGALRMRWQGEGPDGLGVWTDLRGAT 109 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ + L LGP+P + + + + L++Q ++AG+GN+ Sbjct: 110 ACEVLAAPEVDRI--LDRLGPDPLRPRSDGAVAHRRIAGSRTAIGALLMDQSVLAGVGNV 167 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R +SP R R + + GT + L+ ++ + + ++ ++ Sbjct: 168 YRAEILFRHGVSPFRPGRDV--DAGTWAAMWADLVVLMRAGVR--MGRIVTTRPEHRTRR 223 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G ++A VY +TG PC C ++ V GR+ ++C CQ Sbjct: 224 GGAVRREDAHYVYRRTGLPC-RVCATPVQTQVMVGRNLYWCPVCQ 267 >gi|145628226|ref|ZP_01784027.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144980001|gb|EDJ89660.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 187 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 20/206 (9%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 MSGS + +H+H+ I + N V YNDPRRFG E + Sbjct: 1 MSGSLRVVEKGDLID----KHDHLDIVVNNGKV-----VRYNDPRRFGAWLWTEK--LNE 49 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +P LGPEP F++ YL + KK + LK L++ +V G+GNIY E L+ L Sbjct: 50 FPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLH 109 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + SL + +L+++I++VL +AI GG++L+D++ DG GYF V Sbjct: 110 PQKTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFLQPDGHPGYFVQELRV 163 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRST 281 YG +PC CG R+ + R+T Sbjct: 164 YGNKDKPC-PTCGTKNRK--FSDRAT 186 >gi|314968408|gb|EFT12506.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL037PA1] Length = 299 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 115/294 (39%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIDLAFAGSRVEVTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C+ CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCSRCQR 296 >gi|300780206|ref|ZP_07090062.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] gi|300534316|gb|EFK55375.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium genitalium ATCC 33030] Length = 267 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 106/290 (36%), Gaps = 28/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++ R + N + + RF ++ G ++ + K+L ++ Sbjct: 1 MPEGHVLHRLARELNANFRSAPVEVTSPQGRFTQ----ASLIDGSRLTRATAHGKHLFVD 56 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ GS E + + ++N T R Sbjct: 57 FDAPHVEHVVYIHLGLIGSLRFEPAEDN-------WGQIRLHISNGTIAANL-------R 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ + G +P + L + H+ ++ + L++QK+ AG+ Sbjct: 103 GPQFCKLLTDDEVDAI--IARSGFDPIVEATPPDALYAKIHRSKRSIGSLLMDQKLFAGV 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R + P L + D++ + + ID + + + Sbjct: 161 GNIYRAEVLFRQGIDPTVPGTLLSRAQFDAIWTDLVELMAYGVDNGRIDTVRPDHTP--E 218 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D VY + G+PC CG I V GR ++C CQ Sbjct: 219 TMGRDPRKDDHGGEVYVYRRAGDPCY-ICGTPIEMKVSEGRKLYWCPGCQ 267 >gi|317126518|ref|YP_004100630.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] gi|315590606|gb|ADU49903.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum DSM 43043] Length = 302 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 115/293 (39%), Gaps = 37/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + V + L L +A RG++ ++V R K+L Sbjct: 1 MPEGDTVWRTAHRLDQALAGREVVESDLRWPTL-------ATADLRGRRTLEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M G + IE T KP + H+ L T Sbjct: 54 LHRLEGGLTLHSHLRMEGQWRIEPTPRLKPGWR-RSPHLRALLATADWTALGL------- 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R G +DLVETS + + LGP+ + ++ + ALL+Q+ +AG+ Sbjct: 106 RLGMLDLVETSREAD--LVGHLGPDLLGDDWHPDRAVDHLAACAVPIGEALLDQRNLAGL 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTP-KDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 G ++ E L+ +L P +L + D ++LI + RD Sbjct: 164 GTLWTAETLFALRLHPWADASTLGRPALEEVVDRAHRLIDAGR--------------RDA 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 V V+G++G PC CG +R + R+ FYC CQ Sbjct: 210 VQSATGSLAKGETTYVHGRSGRPC-RRCGTTVRVALIGPATRERTMFYCPSCQ 261 >gi|328885453|emb|CCA58692.1| Formamidopyrimidine-DNA glycosylase [Streptomyces venezuelae ATCC 10712] Length = 274 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 38/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + T+T L P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTIWQTAHRLHTALAGRTLTRADLR-------VPRYATADLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++ + + + +P P H + L N +T Sbjct: 54 LARIEGGLTLHSHLRMDGAWRV-YVTGQRPHGGPDH-QIRAILGNADHTAY-------GY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL----THQFHKKNSNLKNALLNQKI 176 R ++L+ T+ + + LGP+ + A +L ALL+Q+ Sbjct: 105 RLPVLELIRTTDESG--AVGHLGPDLLGPGWGAEEAEEATRRLLADPARSLGEALLDQRN 162 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQN-NGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AGIGN+Y E + A ++P L + ++L+ + Sbjct: 163 MAGIGNVYKSELAFLAGVTPWVPVGDLGPDVPARLVATAHRLLDANKDRPDRRTTTTRRP 222 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G CL CG IR+ R T++C CQ+ Sbjct: 223 G--------------TPLHVYGRAGRSCL-RCGARIRKAELGDRVTYWCPGCQR 261 >gi|331695858|ref|YP_004332097.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] gi|326950547|gb|AEA24244.1| DNA-formamidopyrimidine glycosylase [Pseudonocardia dioxanivorans CB1190] Length = 268 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 32/293 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR L + V R P ++ G + RR K + Sbjct: 1 MPELPEVESARRVLEHALDRRIVAVDDTDEWVCRPHPPGEIASVLVGGTLTAAHRRGKAM 60 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 E + + +HLGM G ++ + +P+ + ++ V Sbjct: 61 WCETRDEHGDDGPHLGLHLGMGGHLVVTDADDVRAGGDPRPD----GSQGRPEWNRFTVT 116 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 ++D D P + LGP+ A L + + ++ +K LL+QK Sbjct: 117 FDDGGELRLFDKRRLGRVRLDPDIDALGPDA--EEITAAGLRERLRRSHAPVKARLLDQK 174 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +VAGIGN+ E LW+A+++P R L + + +L + +++ L AI+ GG Sbjct: 175 VVAGIGNLLADETLWQARIAPSRPADELDRTE------VNRLHRNLERALRSAIEKGGV- 227 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + C CG + GRST++C+ Q Sbjct: 228 -------------HTGRVIAHRRADGAC-PRCGAPMVHGTVGGRSTWWCSAEQ 266 >gi|157369504|ref|YP_001477493.1| endonuclease VIII [Serratia proteamaculans 568] gi|157321268|gb|ABV40365.1| DNA-(apurinic or apyrimidinic site) lyase [Serratia proteamaculans 568] Length = 263 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 114/292 (39%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T++ L+ H+ G++II + R K L Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVGFAFPQLK-----HYRDRLIGERIIAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + K + V + + Sbjct: 56 LTHFSNGLTLYSHNQLYGVWKVVKAGETPETK--RDLRVRLETADRAILLYSA------- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + + Q+P L+ +GP+ D + + + + L LL+Q + Sbjct: 107 --SEITVGPREEIEQHPFLQRIGPDVLDMTLTVAAVEQRLLSPAFRRRQLGGMLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P K + L + L +L + + V + R Sbjct: 165 AGLGNYLRAEILWQAELAPQHKPQDLAP------ETLQRLAEALLAVPRLSYQ-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 214 GQVDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIERTTLSSRPFYWCPGCQK 263 >gi|256375288|ref|YP_003098948.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255919591|gb|ACU35102.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 267 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 32/292 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++ R + + + + RF + A G+ ++ K+LL Sbjct: 1 MPEGHVLHRIARLHQRVYAGQALTVTSPQGRFA-----AEAVDGRVLVKAEAHGKHLLHV 55 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G F +P+ V + + N D R Sbjct: 56 YGPDAIVHVHLGLYGKFAEHEPPVTEPV-----GQVRMRIVGERNW-------TDLRGPA 103 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ LGP+P + + L L++QK+VAGIGNI Sbjct: 104 ACEVLTLDGVAALR--ARLGPDPLRRDAKPAEALARVRRSKQPLATLLMDQKVVAGIGNI 161 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R L P++ Q + +++ + ++ ++ D + AG H+ Sbjct: 162 YRAELLFRHGLDPMK------QGSAVDEELWAAMWPDLVALMRDGVKAGRIDTVRPAHLP 215 Query: 244 GSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G VY + G+PCL CG + V A R+ ++C CQ+ Sbjct: 216 EVTGRAPREDRHGGEVYVYRRAGQPCL-VCGTPVAHAVLAARNLYWCPTCQR 266 >gi|324997971|ref|ZP_08119083.1| endonuclease VIII [Pseudonocardia sp. P1] Length = 271 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + RF+ +A G+ + K+L Sbjct: 1 MPEGHTLHRLAKRHRSLFVRRPVRVSSPQGRFEGS---AALLDGQVMTGAEAHGKHLFHR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F +P+ + + L ++ Y D R Sbjct: 58 YGRDRVVHVHLGLYGTFTESELPAPEPV-----GQLRMRLVGESH-------YADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ ++ LG +P + + + + S L L++Q ++AG+GN+ Sbjct: 106 ACELITSAEARAVR--ARLGADPLRRDADPDRVWERVSRSRSPLATLLMDQAVLAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R L P R L + + D++ + ++ ID + R Sbjct: 164 YRAELLFRHGLDPQLPGRGLDRATWDAMWPDLVALMRDGVRVGRIDTVRPEHDPRR--RG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G VY + G PCL CG +R A R+ F+C CQ Sbjct: 222 EPGRKDRHGGEVYVYRRAGLPCL-VCGTEVRHSEHAARNLFWCPTCQ 267 >gi|111225082|ref|YP_715876.1| endonuclease VIII [Frankia alni ACN14a] gi|111152614|emb|CAJ64355.1| Endonuclease VIII [Frankia alni ACN14a] Length = 301 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 107/298 (35%), Gaps = 44/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R + + + PH +A G++II V+ R K+L Sbjct: 1 MPEGDTVWRVARRMDAALAGARLLSSDFR-------VPHLATADLSGQRIIGVAARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +G LS+ H M GS+ + P + + LT Sbjct: 54 LTRFDGGLSLHTHFRMEGSWHLYRPGV--PWSGGPAWQIRVVLTTAEQVAV-------GY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R ++L+ TS + + LGP+ ++ + + ALL+Q+I+AG Sbjct: 105 RLAIVELLATSREQD--AVGHLGPDVLGPDWDLDVVVAALRAVPQRQIGAALLDQRIIAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI+ EA + A +SP + G + + +I GG + Sbjct: 163 LGNIWRTEACFVAGVSPWTPVGDVPDLPGLVRRA---------QAMIRTGAHGGHQVTTG 213 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---------GRSTFYCTYCQ 288 G VYG+ G PC CG I Q R T +C CQ Sbjct: 214 STRPGE------EHWVYGRAGRPC-RRCGSRILTADQGRLPGRIDEESRRTTWCPRCQ 264 >gi|91215880|ref|ZP_01252849.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] gi|91185857|gb|EAS72231.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] Length = 260 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 117/289 (40%), Gaps = 32/289 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + + + +T++ L F A +++I+ R KYL Sbjct: 1 MPELPEVQGYKTYIDSTSLHQRITEVDCRDTKLLKKPKADFDAYLYNQELIETQRIGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G +++H GM+G + P+ H+ +S N + + + R Sbjct: 61 FLKTTGKKILVMHFGMTGRPHYYKNEEDR----PKFGHLELSFENG-----FHFAFENKR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG+ DL+++ ++ L + F+ + +++K +++Q + AG+ Sbjct: 112 KFGWWDLIDSIADFKAS--HKLSDDA--RDLTLEDFKQSFNGRKTDIKKIIMDQSVAAGV 167 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPK-DILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GN E L+++K+ P +K + + D + K+I+ + D Sbjct: 168 GNWMADEILYQSKIHPTKKVIEMTDTDIKSVFDAMKKVIEVAIENHAHYKD--------- 218 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + K G C G I +I GR+T++ Q Sbjct: 219 --------FPKTFLMHFRKEGATCYHT-GAQIEKIKVGGRTTYFSPQWQ 258 >gi|313808048|gb|EFS46529.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL087PA2] Length = 299 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 35/294 (11%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE +I R + + + RF +A G + K+L+++ Sbjct: 29 PEGHVIHRLANAIGLAFAGSRVEGTSPQGRF---AESAAMLDGTVLASAQAWGKHLVVDF 85 Query: 65 EG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 + + + +HLG+ G +E T P V + +T+ V D R Sbjct: 86 DNHRPDHLLHIHLGLIGKLAVEPT-------VPVVGQVRLRITDG-------VTAADLRG 131 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L+ T+GP+P + + + + + + + LL+Q++ AG+G Sbjct: 132 PQTCELINDDEWGTVA--ATIGPDPIRDDADPDVAWDKVRRSSRRISDVLLDQRVAAGVG 189 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L+R ++ P + + + + ++ ++ +++G H Sbjct: 190 NIYRAEVLFRHRVDPATLGKQISHS------TWLAMWDDLVMLMRAGVESGRIDTVQPEH 243 Query: 242 IDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++G VY + +PCL C +R + Q GR F+C CQ+ Sbjct: 244 TPEAMGRPPRVDHHGGEVYVYRREDQPCL-VCNTPVRMVAQGGRHLFWCPRCQR 296 >gi|300715872|ref|YP_003740675.1| Endonuclease VIII [Erwinia billingiae Eb661] gi|299061708|emb|CAX58824.1| Endonuclease VIII [Erwinia billingiae Eb661] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 32/277 (11%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 +K T+TD+ L+ + A G+++ + R K +L L++ H Sbjct: 2 EKAIKGKTLTDVWFAFPQLK-----TYEPALLGERVEAIETRGKAMLTHFSNGLTLYSHN 56 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 + G + + + + V ++ + K ++Y+ ++L+ Sbjct: 57 QLYGVWRVAKSGVDPATN--RILRVRLAAED-----KAILLYSAS----EIELLNADTLM 105 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNS---NLKNALLNQKIVAGIGNIYVCEALWR 191 +P L+ +GP+ D + + + + LL+Q +AG+GN E LW Sbjct: 106 AHPFLQRVGPDVLDMTLTSEQVKARLLSSRFRRRQFSALLLDQAFLAGLGNYLRVEILWL 165 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 A L+P K + L + I + + R + G Sbjct: 166 AGLAPQHKAQDLTEEQLALLADALLAIPRLSYL-----------TRGVSKENKHHGAL-F 213 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +F V+ + G+PC CG +I + V + R ++C CQ Sbjct: 214 SFKVFHRAGQPC-ERCGGIIEKTVLSSRPFYWCPGCQ 249 >gi|326776189|ref|ZP_08235454.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326656522|gb|EGE41368.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 306 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 112/320 (35%), Gaps = 51/320 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHEALAGQVLTRSDLR-------VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + + P H I YR+ Sbjct: 54 LTRFEGGLTLHSHLRMDGAWRV-YGPHERWRGGPGHQIRAILANAEHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ TS + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVLELLRTSEEDR--AVGHLGPDLLGPDWDPGRALDRLLTAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y CE + A+++P +L L + + + S LR Sbjct: 163 IGNVYKCELCFLARVTPWLPVGALPDGALLRLVTLAERLLYANRDRPTRTTTITSELRTP 222 Query: 240 VHIDGSIG-------------------------------YFQNAFSVYGKTGEPCLSNCG 268 Q VYG+ PCL CG Sbjct: 223 RPPPPGPEAEAKAGAEAHAGAGAERPRSRAAPRPARPPVRVQERLYVYGRARRPCL-RCG 281 Query: 269 QMIRRIVQAGRSTFYCTYCQ 288 IR Q R T++C CQ Sbjct: 282 TPIRLTDQDDRPTYWCPGCQ 301 >gi|119504953|ref|ZP_01627030.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] gi|119459239|gb|EAW40337.1| endonuclease VIII [marine gamma proteobacterium HTCC2080] Length = 279 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+K+ + + L+ + +G I+ + R K L Sbjct: 1 MPEGPEIRRAADKIEAVLKDRVAEKVEFGLQPLK-----KYVKPLKGSNILALETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + +I H + G + + K K P+ N + N +D Sbjct: 56 LTHFDSGFTIYSHNQLYGVWRVV-----KRDKLPKTNRQLRLAIHTDNHSALLYSASDIS 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLNQKIV 177 + +T ++P L+ +GP+ + + + + K L + L+Q + Sbjct: 111 ------VWKTQNIEEHPFLQRIGPDILNPDLSWRTVAERLQSKAFSGRALNSVYLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A ++P +K R L + + KL + +V + G +L Sbjct: 165 AGLGNYLRSEILFIAGINPAQKARDLSKGQ------VGKLARTTLEVSQRSYALEGVTLP 218 Query: 238 DYVHI---DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + + Y + F V+G+ +PC C I+R R + C CQ Sbjct: 219 ERQYRTLKNQGVTYGKARFFVFGRARQPC-RVCKTKIQRSTANSRRIYTCATCQ 271 >gi|329939941|ref|ZP_08289223.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] gi|329300767|gb|EGG44663.1| DNA glycosylase [Streptomyces griseoaurantiacus M045] Length = 275 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 112/293 (38%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P ++ G ++DV+ R K+L Sbjct: 1 MPEGDTVHQAAARLHTALAGRRLTRFDLR-------VPRFATSDLTGHTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG ++ HL M G++ + + + P H I T YR+ Sbjct: 54 LTRIEGGYTLHSHLRMDGAWKL-YAPGKRWTGGPAHQIRAILGTEERTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T + + + LGP+ ++ L + + L ALL+Q+ +AG Sbjct: 107 --PVLELLRTEEESR--AVGHLGPDLLGPDWDPDTALANLLREPTRPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN++ E + + +P L + L + + E + Sbjct: 163 IGNVFKSELCFLLRATPWLPLGELPPGHLAALPALARKVLEANRE--------------- 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + G + VYG+ G PCL CG IR Q R T++C CQ Sbjct: 208 RPVRNTTGRREQPLFVYGRAGRPCL-RCGTRIRLADQGDGSRERPTYWCPVCQ 259 >gi|227495344|ref|ZP_03925660.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] gi|226831214|gb|EEH63597.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces coleocanis DSM 15436] Length = 274 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 28/294 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R ++ + + + RF G +I S K++ I+ Sbjct: 1 MPEGHVIHRLTARLLADFGGYSLEVLSPQGRFADSAEL---LSGLQITGSSSWGKHIFIK 57 Query: 64 LEGNL-----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + VHLG+ G + P+ + + L + Sbjct: 58 FGEEPDELARWLHVHLGLYGKWRFYPLDVFGNPPAPKGE-IRLRLVGREEVADL----SG 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 P R + S L+ LGP+P ++ + + + +++Q +V Sbjct: 113 PTRCAVV-----SYDEVLDVLKRLGPDPLVNHPADRAEFIRLVRARKRAIGELVMDQSVV 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG--GSS 235 AG GNIY E L+R +SP RK ++ + L L +++ L+D ++ G + Sbjct: 168 AGPGNIYRAECLFRVGISPFRKGSNISEKR------LGLLWDDLRAGLLDGLETGFISTM 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 L + + + F VY +TG PCL CG M+ + R F+C CQ+ Sbjct: 222 LEEDLRAEDPEDVEAQRFYVYHRTGRPCL-RCGSMVAEQLMQNRRLFWCPGCQR 274 >gi|302542087|ref|ZP_07294429.1| endonuclease VIII [Streptomyces hygroscopicus ATCC 53653] gi|302459705|gb|EFL22798.1| endonuclease VIII [Streptomyces himastatinicus ATCC 53653] Length = 273 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P + G+++++V R K+L Sbjct: 5 MPEGDTVWQTARRLDDALAGPPLTGCDLR-------VPRLATVDLTGRRVLEVVARGKHL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M G++++ + PQH + T YR+ Sbjct: 58 LTRVEGGLTLHSHLRMDGAWLVYGHG-ERWRGGPQHQIRAVLATAERTAVGYRL------ 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L + + ALL+Q+ +AG Sbjct: 111 --PVLELLRTADEDR--AVGHLGPDLLGPDWDPDEALGRLLADPSRPVGEALLDQRNLAG 166 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y CE + ++ P + + +L++ + A R Sbjct: 167 IGNVYKCELCFVLRIPPWLPIGRVPSPE-RLVAVAKRLLEANRTRRARVTTAHARPDR-- 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ G PCL CG +R Q R+TF+C CQ Sbjct: 224 ------------RLWVYGRAGRPCL-RCGTPVRAADQGRAGQERTTFWCPVCQ 263 >gi|84497253|ref|ZP_00996075.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] gi|84382141|gb|EAP98023.1| hypothetical protein JNB_13703 [Janibacter sp. HTCC2649] Length = 284 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 23/294 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+L + + T + +F +A G ++++ + K+L Sbjct: 7 MPEGHTLHALARDLDIAFRG---TSPTVSSPQGKFGGG---AALLSGHEVLEATSWGKHL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E G+ + VHLG+ G+F I+ TS A + P V + + D R Sbjct: 61 FVEFAGDRILWVHLGLIGTFTIDTTSYAGEV--PVVGQVRCRFATSDH-------VADLR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF---NAIYLTHQFHKKNSNLKNALLNQKIV 177 D+V + L LGP+P S + + + + + L++Q ++ Sbjct: 112 GPMVCDVVTPEKVDEI--LARLGPDPLRPSDVRSDPDLAWKRIQRSSKPIAELLMDQAVL 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 AG+GN+Y E L+R +++P R L + +D++ L + I I + Sbjct: 170 AGVGNVYRSEVLFRLRVNPFRPGNKLQRKTWRAIWEDLVTLLPIGVATSKIVTIHEQVDA 229 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + GE C CG I+ + AGR+ F+C CQ+ Sbjct: 230 VAQALEAGEDVRMTTRDSYVYKRQGEAC-HVCGSKIKTQIMAGRNLFWCGNCQR 282 >gi|297518691|ref|ZP_06937077.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 137 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 7/144 (4%) Query: 146 PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 P + FN YL + KK + +K L++ K+V G+GNIY E+L+ A + P R SL Sbjct: 1 PLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSL 60 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 L + I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC Sbjct: 61 AE------CELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-R 113 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQK 289 CG I A R+TFYC CQK Sbjct: 114 VCGTPIVATKHAQRATFYCRQCQK 137 >gi|254425007|ref|ZP_05038725.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] gi|196192496|gb|EDX87460.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] Length = 277 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ I + ++ T++ FD F A G ++ +V R K + Sbjct: 1 MPEGPEIRIAADKIQRAIRPYPTTEVFFA-----FDHLKPFEADLSGCRVTEVETRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + LS+ H + G +++ + ++ N KK ++Y+ Sbjct: 56 LTHFDNGLSVYTHNQLYGKWMVRKAHDFPETN----RQLRFAI---HNEKKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK---NALLNQKIV 177 L S +P L LGP+ L K + L+Q + Sbjct: 109 ---IQILSSQSEIENHPFLSKLGPDVLSKQLKPEVLQALLSAKKHCCRRLSTLYLDQHFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AGIGN E L+ A+L P + L+ L + + G + Sbjct: 166 AGIGNYLRSEILFVAQLHPQMRPIDCTDEQ------LFTLANASISIAYQSYRYKGVTND 219 Query: 238 -DYVHIDGSIG--YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D + + G Y + + V+G+ +PC + C I + + + R +YC CQ Sbjct: 220 LDLANRLKAKGLSYREYRYRVFGRVNQPCYA-CATPIIKEMVSNRRIYYCPTCQ 272 >gi|307130091|ref|YP_003882107.1| Endonuclease VIII [Dickeya dadantii 3937] gi|306527620|gb|ADM97550.1| Endonuclease VIII [Dickeya dadantii 3937] Length = 262 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 33/292 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L+ + T+T + L+ + A G+++ + R K L Sbjct: 1 MPEGPEIRRAADRLVAAVVGKTLTGVWFAFPELK-----PYEATLMGEQVERIVTRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L + H + G + + +P + V + +N + Sbjct: 56 LTRFSNGLVMYSHNQLYGVWRV----GKQPPDTRRELRVRLDTDDNAVSLYSASDIA--- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++ +P L+ +GP+ D S + + L LL+Q + Sbjct: 109 ------MLTPEQLATHPFLQRIGPDVLDESLTVDEVRERLLSARFCRRQLGTLLLDQGFL 162 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW + L+P R+ L + +L +++ EI ++ + GS Sbjct: 163 AGLGNYLRVEILWASALAPTRRAADLSEAELA---MLSRMLLEIPRL---SYQTRGSESD 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + H G++ F V+ GEPC CGQ I + + A R + C +CQ+ Sbjct: 217 ERRH-HGAL----FRFHVFHLDGEPC-ERCGQPIVKSLVASRPFYACPHCQQ 262 >gi|256396410|ref|YP_003117974.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] gi|256362636|gb|ACU76133.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] Length = 277 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 95/265 (35%), Gaps = 22/265 (8%) Query: 27 CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 + RF+ A K+L I + I VHLG+ G F + Sbjct: 30 EVSSPQGRFEASARLVADLP---YAGSEAHGKHLFIGFGPDRWIHVHLGLYGKFHVTEEP 86 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 P V + + + D R DL + + +R LGP+P Sbjct: 87 -----PGPVVGQVRLRMVGKSGH-------ADLRGASACDLY--GPEERGALVRRLGPDP 132 Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + + + + L+ Q +++G+GN+Y E L+RA L P K R L + Sbjct: 133 LRADADPDLAWRKISNSSLTVAELLMEQPVLSGVGNVYRAEVLYRAGLDPYLKGRDLARE 192 Query: 207 N--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL 264 G D++ + + + ID + + + VY + G+PCL Sbjct: 193 QWDGIWTDLVELMAEGARIGRIDTV--WPQHTPEAMGRPPRKDDHGGEVYVYRRNGQPCL 250 Query: 265 SNCGQMIRRIVQAGRSTFYCTYCQK 289 CG + R+ F+C CQK Sbjct: 251 -VCGTPVATAGVRDRNLFWCPTCQK 274 >gi|182435554|ref|YP_001823273.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464070|dbj|BAG18590.1| putative endonuclease VIII [Streptomyces griseus subsp. griseus NBRC 13350] Length = 308 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 112/322 (34%), Gaps = 53/322 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVLQTAARLHEALAGQVLTRSDLR-------VPRFATADLSGRTVLDVTARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG L++ HL M G++ + + + P H I YR+ Sbjct: 54 LTRFEGGLTLHSHLRMDGAWRV-YGPHERWRGGPGHQIRAILANAEHTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ TS + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVLELLRTSEEDR--AVGHLGPDLLGPDWDPGRALDRLLTAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y CE + A+++P +L L + + + S LR Sbjct: 163 IGNVYKCELCFLARVTPWLPVGALPDGALLRLVTLAERLLYANRDRPTRTTTITSELRTP 222 Query: 240 VHIDGSIG---------------------------------YFQNAFSVYGKTGEPCLSN 266 Q VYG+ PCL Sbjct: 223 RPPPPRPEAEAKAGAEAHAGAGSGAERPRSRAAPRPARPPVRVQERLYVYGRARRPCL-R 281 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG IR Q R T++C CQ Sbjct: 282 CGTPIRLTDQDDRPTYWCPGCQ 303 >gi|153004588|ref|YP_001378913.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] gi|152028161|gb|ABS25929.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. Fw109-5] Length = 282 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 107/291 (36%), Gaps = 21/291 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + RNL + V L G+ + V+ R K+L Sbjct: 1 MPEGDTIHRAARNLHGALAGEVVIRFETVLPRLARVDED---RPVAGRTVESVTARGKHL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+L + HL M+GS+ + + P+ + T + + Sbjct: 58 LLRFSGDLVLRTHLRMNGSWHLYRPG--ERWFRPRDAMRVLVETRPWIAVGFDLPVA--- 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAG 179 +L++ + L LGP+ +F+ + + + L ALL+Q+ +AG Sbjct: 113 -----ELLDARGLARQRDLARLGPDLLSPAFDPPEAERRLRARADRELGEALLDQRALAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN E L+ A L P R SL + + + + A GGS+ Sbjct: 168 VGNELKSEILFLAGLDPWRTVASLSGPELSALVATARRVL----LAAVAPFEGGSTTWLG 223 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR--RIVQAGRSTFYCTYCQ 288 VYG+ G+PC CG +R R R T++C CQ Sbjct: 224 GRRTTGRSNPGERLFVYGRAGQPC-RRCGGPVRVGRQGAGARLTYHCPRCQ 273 >gi|256784815|ref|ZP_05523246.1| DNA glycosylase [Streptomyces lividans TK24] gi|289768704|ref|ZP_06528082.1| DNA glycosylase [Streptomyces lividans TK24] gi|289698903|gb|EFD66332.1| DNA glycosylase [Streptomyces lividans TK24] Length = 276 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 106/294 (36%), Gaps = 41/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLHDALAGRVLTRSDFR-------VPRYATVDLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T + YR+ D Sbjct: 54 LTRVEGGLTVHSHLRMDGSWKVF-APGQRWSGGPAHQIRVILGTADRTAVGYRLPVLDIL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R + + LGP+ ++ L ALL+Q+ +AG Sbjct: 113 R----------TAEEQRAVGHLGPDLLGPDWDPERALDNLRADPPRALGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY-KLIQEIQKVLIDAIDAGGSSLRD 238 IGN+Y E + ++P L + L KL++ + + Sbjct: 163 IGNVYKSELCFLLGVTPWLPVGELPADRAARLPTLAKKLLEANRDHPVRR---------- 212 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + G VYG+ PCL CG +R Q R T++C CQ Sbjct: 213 ------TTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGSRERPTYWCPTCQ 259 >gi|296269082|ref|YP_003651714.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296091869|gb|ADG87821.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 261 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 116/293 (39%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T P H +A RG+ ++ R K+L Sbjct: 1 MPEGDAVYRAAKRLRESLDGRVLTRSEFR-------VPRHATADLRGRAVLTTVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L+I HL M G + I+ P + V + L N T Sbjct: 54 LTRVEGGLTIHTHLRMDGRWRIDRAGRPIPGG----DVVRLILANETWQAVGI------- 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 R G +L+ T + + + LGP+P ++A + + + ALL+Q+ +AG Sbjct: 103 RLGVTELLPTDREDRV--VGHLGPDPLGPDWDAAWAARNLARAPGRAIGEALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +G I+ E L+ A++SP R S+ P D L L +++L A D Sbjct: 161 LGTIWRAETLFAARMSPWRAAGSI------PVDELEALAAIARELLDAAKDQ-------P 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + + VYG+ G PC CG I R R ++C CQ Sbjct: 208 LPVSTGDRRRGRELFVYGRAGRPC-RRCGTPISRGELGTAPDERLIYWCPVCQ 259 >gi|227502181|ref|ZP_03932230.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077005|gb|EEI14968.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 271 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + + RF +A G +I K+L + Sbjct: 1 MPEGHVIHRLALTLNADYRGMPLSVTSPQGRFATE---AAILDGTEIDHAEAFGKHLFVH 57 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +HLG+ G E + + I + N + R Sbjct: 58 FTAANPAHILYIHLGLIGKLSFEPREENR-------GQIRIRIDNGAQAAQL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ + L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 GPQFCLLLT--EEDYQARLTKVGQDPLRVDADPEALWTKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+RA LSP + + + KD++ + ++ ID + A S + Sbjct: 162 GNIYRAEALFRADLSPFTPGKDVSRETFFAIWKDLVELMNYGVEHGRIDTVRAEHSP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG I V GR+ F+C CQ Sbjct: 220 AMGREPRKDDHGGEVYVYRRAGLPCY-VCGTPIAEQVMEGRNLFWCPTCQ 268 >gi|302560643|ref|ZP_07312985.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] gi|302478261|gb|EFL41354.1| formamidopyrimidine-DNA glycosylase [Streptomyces griseoflavus Tu4000] Length = 273 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 107/292 (36%), Gaps = 26/292 (8%) Query: 4 LPEVEIIRRNLMMVMKN-MTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLI 62 +PE I R T T + + +F T + K+L + Sbjct: 1 MPEGHTIHRLAQDYAAAFATGTPLRVTSPQGKFADAAALLDRTP---LHTTDAHGKHLFL 57 Query: 63 ELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 G + +HLG+ G P + V + L ++ + Y D Sbjct: 58 GFGGPEPAEWVHIHLGLFGKVTFGPAPVPPPT-----DTVRLRLAHD-------LSYVDL 105 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R L+ K LGP+P + + + + + L++QK++AG Sbjct: 106 RGPTTCALITDGEKRAVHD--RLGPDPLRPDADPDQAYRRISRSRTTIAALLMDQKVIAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +GN+Y E L+R ++ P R R + + G D++ + + ++ ID + + Sbjct: 164 VGNVYRAEVLFRHRVDPYRVGRDITRAQWDGIWADLVALMREGVRNNRIDTVRPEHTP-- 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + PC CG IR A R+ F+C CQ+ Sbjct: 222 EAMGRPPRVDDHGGEVYVYRRANLPC-HLCGGEIRTAGLAARNLFWCPACQR 272 >gi|284030930|ref|YP_003380861.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] gi|283810223|gb|ADB32062.1| DNA-(apurinic or apyrimidinic site) lyase [Kribbella flavida DSM 17836] Length = 261 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 108/293 (36%), Gaps = 40/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + P + G+ +++V R K+L Sbjct: 1 MPEGDTVWRATKRLHQALAGKVLVKSDFR-------VPALATTDLSGETVVEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + ++I HL M GS+ + + P + + T+ YR+ Sbjct: 54 LMRISNGVTIHSHLRMEGSWHLYRPG-ERWKGGPDYQVRAVLGTDAWTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAG 179 ++LV T + + LGP+ +F+ + + + + ALL+Q+ +AG Sbjct: 107 --PVLELVATDAENTV--VGHLGPDILSPTFDRTQAIANLAADPDRTISEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + L P + + G D+ +L++ L++ Sbjct: 163 IGNFYRVEVCFLLGLHPWKPVSQVDL--GAAVDLSRRLMKAN--------------LQNA 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + V+ + G+PC C I R TF+C +CQ Sbjct: 207 AQVTTGVNRPGQRSWVFERAGKPC-RRCRTTILTAHLGQPPQDRVTFWCPHCQ 258 >gi|311740281|ref|ZP_07714112.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304664|gb|EFQ80736.1| DNA-formamidopyrimidine glycosylase [Corynebacterium pseudogenitalium ATCC 33035] Length = 271 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 104/290 (35%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RF G++I K+L + Sbjct: 1 MPEGHVIHRLANKFNADFRGMPLRVTSPQGRFAAEAEL---LDGERIELAETYGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G E + + + N R Sbjct: 58 FSAQDPRHILYIHLGLIGKLRFEPREETG-------GQIRVRIDNGAEAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ L +G +P + L + HK ++ + +++Q + AG+ Sbjct: 104 GPQFCRLLTEEEYRAQ--LAKVGQDPLRTDADVEALWAKVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R LSP R + + + T D++ + ++ ID + S + Sbjct: 162 GNIYRAETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG + V GR+ F+C CQ Sbjct: 220 AMGREPRKDDHGGEVYVYRRAGLPCY-ICGTPVAEKVMEGRNLFWCPTCQ 268 >gi|21224106|ref|NP_629885.1| DNA glycosylase [Streptomyces coelicolor A3(2)] gi|7531104|sp|O86820|Y5760_STRCO RecName: Full=Putative DNA glycosylase SCO5760; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase SCO5760; Short=Putative AP lyase SCO5760 gi|3294248|emb|CAA19861.1| DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 276 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 105/293 (35%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + + G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQAARRLHDALAGRVLTRSDFR-------VPRYATVDLTGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + + P H I T + YR+ D Sbjct: 54 LTRVEGGLTVHSHLRMDGSWKVF-APGQRWSGGPAHQIRVILGTADRTAVGYRLPVLDIL 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R + + LGP+ ++ L ALL+Q+ +AG Sbjct: 113 R----------TAEEQRAVGHLGPDLLGPDWDPERALDNLRADPPRALGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + ++P L + L K + E + Sbjct: 163 IGNVYKSELCFLLGVTPWLPVGELPADRAARLPTLAKKLLEANRD--------------- 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + + G VYG+ PCL CG +R Q R T++C CQ Sbjct: 208 RPVRRTTGLRGQDLFVYGRAPRPCL-RCGTSVRVADQGDGSRERPTYWCPTCQ 259 >gi|169631801|ref|YP_001705450.1| putative DNA glycosylase Nei [Mycobacterium abscessus ATCC 19977] gi|169243768|emb|CAM64796.1| Putative DNA glycosylase Nei [Mycobacterium abscessus] Length = 254 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 107/290 (36%), Gaps = 37/290 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + +T + P + G+++ V R K+L Sbjct: 1 MPEGDTVFRTAKLLDDALGGRILTGCDIR-------VPRFATVDLSGQRVEGVIARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ I P N H + T+++ + Sbjct: 54 FIRV-GGASIHSHLKMDGSWRIMPAGRPGPTWN--HRIRAVLTTDDSVAVGTSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G +D+V+ + + LGP+ ++ + + + L ALL+Q+++AG Sbjct: 105 --GILDVVDRRREGDV--VGHLGPDLLGTDWDPDVAVERLIARSDEALSAALLDQRVMAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + A L P L G + + S R Sbjct: 161 IGNVYSNELCFLAGLLPTTAVGRLGDPAGLVERAHTLMHANK------------DSYRRT 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+PC CG I R R ++C CQ+ Sbjct: 209 TTGDPRSGR---ELWVYGRHGKPC-RRCGTPIARDQGLPRVAYWCPNCQR 254 >gi|258652623|ref|YP_003201779.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] gi|258555848|gb|ACV78790.1| DNA-formamidopyrimidine glycosylase [Nakamurella multipartita DSM 44233] Length = 288 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 125/309 (40%), Gaps = 41/309 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR L + + D+ H + P +A G+ RR K Sbjct: 1 MPELPEVESARRVLADGALHRRIADVDDHDDYVTRPLTPGALRSALIGRTFTAAHRRGKS 60 Query: 60 LLIELEGN-------------LSIIVHLGMSGSFIIEHTSCAKPIK----NPQHNHVTIS 102 + + + G+ + +HLGMSG ++ S + + Sbjct: 61 MWLTVSGDRDDPTDPDASPGDPDLGIHLGMSGIVVVTGPSAPEASGTDLVGGDYRRDREQ 120 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + +++ V + D R +D S P ++ LGP+ S A + Sbjct: 121 FVDRGAYQRFAVTFADGGRMRLLDPRRLSRVRLDPDIQALGPDALGLSPTAFRTAMTAGR 180 Query: 163 K--NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + + +K LL+Q ++AG+GN+ EALWRAK++P R +L L +L + Sbjct: 181 RVSTAPVKARLLDQSVLAGVGNLLADEALWRAKINPGRGVDTLSTAQ------LNRLGRA 234 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 +Q L DAI GG D + K+G C CG + V GR+ Sbjct: 235 VQSALTDAIARGGVHTGDVIAA--------------RKSGARC-PRCGGAMVSGVVGGRT 279 Query: 281 TFYCTYCQK 289 T++C+ Q+ Sbjct: 280 TWWCSKEQR 288 >gi|309811758|ref|ZP_07705534.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434281|gb|EFP58137.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 289 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 110/292 (37%), Gaps = 20/292 (6%) Query: 4 LPEVEIIRRNL---MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE + R + RF S G+ K++ Sbjct: 1 MPEGHVTHRIAGMMNDNFAGRIIKS---SSPQGRF---AESSTRIDGRAFDHAEAYGKHM 54 Query: 61 LIELEG-NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR-VIYND 118 L+ EG + + +HLG+ G F + +P++ P + L +++ R + D Sbjct: 55 LVAFEGLDERVNIHLGLLGKFFWTY--GVEPVEAPITGAIRWRLGASSDDGDARGSVVMD 112 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R L + LGP+P + + ++ + L++QK+ Sbjct: 113 LRGPNVCALKTPDEVAAI--VGKLGPDPLRVDADPDVAWVRIRHTSTPIAALLMDQKVFN 170 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSL--IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 G+GNIY E L+R L P + L + + D++ + ++ ID + S Sbjct: 171 GVGNIYRAEVLFRHGLDPKMPGKFLRRTEFDAIWADLVALMPLGVRDGRIDTVRDEHSP- 229 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + D + VY + G+PCL CG + AGR+ F+C CQ Sbjct: 230 -EIMGRDPRVDKHGGEVYVYRRAGQPCL-VCGTPVAIEEFAGRNLFWCPRCQ 279 >gi|163793016|ref|ZP_02186992.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] gi|159181662|gb|EDP66174.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] Length = 300 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I L + +T + + L +A G ++ + R K + Sbjct: 1 MPELPDIAIYLEALERRILGAEITGLRIASPFLVRSVDPPIKSAV-GHRVESLRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I L+G L +++HL ++G P K + T + + Sbjct: 60 VIGLDGELFLVLHLMIAGRLQWAGAGAPLPGKKGL---AALDFDTGT----LILTEMGSK 112 Query: 121 RFGFMDLV-ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + LV + ++ P G EP + + +N LK AL + + +G Sbjct: 113 KRASLHLVCGAAALDEHDPG---GVEPLEVDRDG--FAAALQAENHTLKRALTDPHLFSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSPI ++ L + D + +L + + L+ I+ G + + D Sbjct: 168 IGNAYSDEILHAAKLSPIALSQRLNE------DEITRLFEATRSTLLAWIERGRTEVGDR 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ A + +GK G+PC C I+RIV A T YC CQ Sbjct: 222 --WPTKVSAFRAAMAAHGKYGKPC-PVCATPIQRIVHAANETNYCPRCQ 267 >gi|108798236|ref|YP_638433.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119867332|ref|YP_937284.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|108768655|gb|ABG07377.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119693421|gb|ABL90494.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] Length = 257 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 34/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + + G + +V R K+L Sbjct: 1 MPEGDTVYRTATALREGLVGKTLTRCDVR-------VPRYATVDLTGHVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + S + + I L + + D Sbjct: 54 FIRV-GPASIHSHLKMEGSWKVVPAS----RPSRAGYRIRIILEAGEGEQAVQAAGID-- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G ++++E + + LGP+ + + + L ALL+Q+++AG Sbjct: 107 -LGVLEILERD--HDMETVAHLGPDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + A P R L KD L + + + ++ ++ D Sbjct: 164 VGNVYANELCFVAGHLPTAPVRDL-------KDPLRMVHRARDMLWLNRSRWNRTTTGDT 216 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 217 --------RPGRDVWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|134097938|ref|YP_001103599.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133910561|emb|CAM00674.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 269 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 106/287 (36%), Gaps = 22/287 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLAQLHQKRYGGAAVRVGSPQGRFAAS---AALLDGSVLRRAEAHGKHLFHF 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F T P+ P+ V + + +T+ D R Sbjct: 58 HGPDRVVHVHLGLYGTF----TESELPMDEPR-GQVRMRIVGDTHG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P + + + +++ LL+QK++AG GN+ Sbjct: 106 ACELLTDAEVEALRD--RLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNG--TPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R L + D++ + ++ ID + + Sbjct: 164 YRAEVLFRHGIPPRTPGRDLGRERWDLVWSDLVELMAAGVRAGRIDTVRPEHEP--EATG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PCL CG + GR ++C CQ Sbjct: 222 RAPRQDRHGGEVYVYRRAGQPCL-VCGTEVATADLVGRKLYWCPSCQ 267 >gi|38234839|ref|NP_940606.1| putative DNA repair glycosylase [Corynebacterium diphtheriae NCTC 13129] gi|38201103|emb|CAE50827.1| Putative DNA repair glycosylase [Corynebacterium diphtheriae] Length = 284 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 23/295 (7%) Query: 4 LPEVEIIRRN---LMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 +PE +I R L + T R+ L P +A G + Sbjct: 1 MPEGHVIHRFADQLNQHFASTQATPDTQPRRPLLVTSPQGRFVTEAAQLNGHALDHAEAW 60 Query: 57 AKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+L + + + + +HLG+ GS +E + + + + Sbjct: 61 GKHLFLCFDSDNPAHIVHIHLGLIGSMRLEDPANV-------WGQIRFRIEDPELPTTSA 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 V + R + L+ + LG +P + N + + + + ++ + L++ Sbjct: 114 VA-ANLRGPQWCRLITEAEMTTAT--AKLGADPLRDDANFLAIKTKVARSRRSIGSLLMD 170 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 QK+ AG+GNIY E L+R +SP + + + + +D+ + + + + + ID + Sbjct: 171 QKLFAGVGNIYRAETLFRLGISPFILGKDVAELDLIWQDLRFLMREGVNRGRIDTVRPEH 230 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + VY + G+PC CG I GR+ F+C CQ Sbjct: 231 TP--EAMGRPPRKDDHGGEVYVYRRYGQPCY-VCGTPILECTMEGRNLFWCPTCQ 282 >gi|126433893|ref|YP_001069584.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|126233693|gb|ABN97093.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 257 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 111/290 (38%), Gaps = 34/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + PH+ + G + +V R K+L Sbjct: 1 MPEGDTVYRTATALREGLVGKTLTRCDVR-------VPHYATVDLTGHVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + S + + I L + + D Sbjct: 54 FIRV-GPASIHSHLKMEGSWKVVPAS----RPSRAGYRIRIILEAGEGEQAVQAAGID-- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G ++++E + + LGP+ + + + L ALL+Q+++AG Sbjct: 107 -LGVLEILERD--HDMETVAHLGPDLLGDDWEPRVAARNLSADPDRRLSEALLDQRVMAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + A P R L +++Q + +L + Sbjct: 164 VGNVYANELCFVAGHLPTAPVRDLKDP--------LRMVQRARDMLWLNRSRWNRTT--- 212 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D G VYG+ G+PC CG IRR R +++C +CQ+ Sbjct: 213 -TGDARPGR---DVWVYGRAGKPC-RRCGTPIRRDGNGDRVSYWCPHCQR 257 >gi|70699884|gb|AAZ06853.1| formamidopyrimidine-DNA glycosylase [Microbacterium arborescens] Length = 336 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 119/351 (33%), Gaps = 77/351 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + + RF +A G++ I+ K + Sbjct: 1 MPEGHSVHRIARQFERNVVGRV---VAASSPQGRF---AEGAAVLDGREAIEARAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP------------------------------ 90 + EG++ + VHLGM G++ P Sbjct: 55 FLAFEGDVWLRVHLGMYGAWDFAGEIVVDPTIASANGRMGHTNQRGTEVAPIFDSAGENS 114 Query: 91 ---IKNPQHNHVTISLTNNTNTKK------------------------YRVIYNDPRRFG 123 I P+ + ++ T V D R Sbjct: 115 LSSIGAPRRARGRVRMSEQTTGLGDDGAAVGDEEWPPPVVGQVRLRLLTDVTCADLRGPT 174 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSF--NAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 L + LGP+P + T +K + + L++Q +V+GIG Sbjct: 175 ACQLQTPEEVQA--TIAKLGPDPLVDDLAEGEERFTATVRRKPTPIGLLLMDQSVVSGIG 232 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N+Y E L+RA+++P R + P++ + +L ++ ++L ++ G D + Sbjct: 233 NVYRAEMLFRARVNPHTPGRDV------PEETVRELWRDWVRLLAIGVETGQMMTMDDLD 286 Query: 242 IDG---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + ++ + + VY + G PC CG I A R ++C CQ+ Sbjct: 287 PEAWRRAMAHRDDRHWVYHRAGLPC-RVCGTAIVLEEMASRKLYWCPNCQR 336 >gi|225872458|ref|YP_002753913.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225792139|gb|ACO32229.1| putative formamidopyrimidine-DNA glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 313 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 105/334 (31%), Gaps = 67/334 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E I R + + + N F G+K+ V K+L Sbjct: 1 MPEGNE---IHRFAERHAAALAGGRVSVDSPNGAFPDAEV----LHGRKLQAVEAYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + VHLGM G F P+ + + L N N + R Sbjct: 54 GYVFGRDTILHVHLGMYGDFR-----EGAMPLPPEKGALRLRLWNRANWVELR------- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 G D + + LGP+P + ++N+ + L++Q + AGI Sbjct: 102 --GATDCSIFDGEKWQALVARLGPDPLRPESDPEPGFAIIARRNTPIGQLLMDQSVFAGI 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQ----------------------------------- 205 GNIY E L+RA L P R + + Sbjct: 160 GNIYRAEFLFRAGLHPRTPGREVPRPSIAGIWKDARKLMPLGMIDRRIVTTLAKDRALKR 219 Query: 206 ----------NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 G D +E GG++ + V Sbjct: 220 GPETNQDRALKRGEKTDSARSRKREATMDKASPRKRGGATADQAIPHQRGPAQDDQIHYV 279 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 Y + G+PCL CG I + AGR+ ++C CQK Sbjct: 280 YRRHGKPCL-RCGTKIEKEEMAGRTVYWCPACQK 312 >gi|108804620|ref|YP_644557.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108765863|gb|ABG04745.1| DNA-formamidopyrimidine glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 265 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 31/289 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE+++ L ++ + + + + A G+ + V R K Sbjct: 1 MPELPDVEVLKGRLERTSLGRRISRVEVRDGRVVGEVSARGLREALEGRSLRRVHRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +EG +++H GM+G + +P HV + L + R+ + D Sbjct: 61 LFAGVEGGGWVLMHFGMAGGLSHLPGTEEEP------PHVRLLLGFDGGD---RLAFTDR 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R G + + + + LGP+ + + + +K+ L+NQ +VAG Sbjct: 112 RALGRVHPIRDPESFVRE--KGLGPDALR--VDYPSFRERLGGRRGAVKSVLMNQGVVAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNIY E L+RA+L P L + + + +L + VL AID G Sbjct: 168 LGNIYSDEVLFRARLHPRTGADRLGEED------IRRLFEATGGVLQTAIDRGA------ 215 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G F + G C G IRR+ AGR+ +YC CQ Sbjct: 216 -DPEALPGSF---LLPRRREGARCPRGNG-EIRRLRIAGRTAYYCPACQ 259 >gi|270263766|ref|ZP_06192035.1| endonuclease VIII [Serratia odorifera 4Rx13] gi|270042650|gb|EFA15745.1| endonuclease VIII [Serratia odorifera 4Rx13] Length = 263 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 32/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L + + +T++ L+ H+ G++II + R K L Sbjct: 1 MPEGPEIRRAADALAAAVIDQPLTEVGFAFPQLK-----HYRDRLIGERIIAIEPRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + + K L T + ++ Sbjct: 56 LTHFSNGLTMYSHNQLYGVWKVAKAGESPDTKR--------DLRVRLETAQQAILLYSAS 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 L Q+P L+ +GP+ D S + + + L LL+Q ++ Sbjct: 108 EIT---LGPREEIEQHPFLQRIGPDVLDMSLTVTMVAQRLLSPAFRRRQLGGMLLDQGVL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+P + + L+ + L +L Q + V + R Sbjct: 165 AGLGNYLRAEILWQAELAPQHRPQDLMP------ETLQRLAQALLAVPRLSYQ-----TR 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + G +F V+ ++GEPC CG MI R + R ++C CQK Sbjct: 214 GQVDENRHHGAL-FSFKVFHRSGEPC-ERCGAMIVRTQLSSRPFYWCPGCQK 263 >gi|220912909|ref|YP_002488218.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] gi|219859787|gb|ACL40129.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Arthrobacter chlorophenolicus A6] Length = 317 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 112/334 (33%), Gaps = 68/334 (20%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +RR T + + RF +A G ++ K+L + Sbjct: 1 MPEGHSVRRLARQFGDVFTGERLAVSSPQGRFSGG---AALLDGHTMVAAEAHGKHLFLH 57 Query: 64 LEGNLSIIVHLGMSGSFIIE--------------------------HTSCAKPIKNPQHN 97 + + VHLG+ G++ + Sbjct: 58 FDNARVLHVHLGLYGAWSFGGDRTFTGSSSIGAPRRVGEQESPASGDADASYAGPPAPVG 117 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYL 156 V + L + D R + + + L LGP+P N +A Sbjct: 118 AVRVRLASGHGW-------ADLRGATTCETITEAEVQAV--LDRLGPDPLRNLRGDAGRF 168 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + L++QKI+AG+GN+Y E L+R +L P +L K Sbjct: 169 AANLAGRKPTIAALLMDQKIIAGVGNVYRAEVLFRQRLDPYLPGGALSDAAA------RK 222 Query: 217 LIQEIQKVLIDAIDAGG---SSLRDYVHIDGSIGYFQN-------------------AFS 254 L +++ ++ D + G ++ + + +G G +N A Sbjct: 223 LWRDVVNLMSDGVADGRIITTAAKYWTRRNGKTGRVRNADGTVSLPAKTASMPVRADAHY 282 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G PC CG ++ GR+ ++C CQ Sbjct: 283 VYKRNGLPC-RVCGTVVLAAELVGRNLYWCPVCQ 315 >gi|323359769|ref|YP_004226165.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323276140|dbj|BAJ76285.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 330 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 122/344 (35%), Gaps = 71/344 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + T + RF ++ G++ IDV K + Sbjct: 1 MPEGHSVHRIARQFARNIVGRT---VSASSPQGRFV---EGASVIDGRETIDVRAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP------------------------------ 90 + EG++ + VHLGM G++ Sbjct: 55 FLAFEGDMWLRVHLGMYGAWDFSGEVAVDATIASANGRMGHTNQRGTVLDDAPILDAAGE 114 Query: 91 -----IKNPQHNHVTIS-----LTNNTNTKKYRV-----------IYNDPRRFGFMDLVE 129 I P+ V +S L T V D R L Sbjct: 115 NSLSSIGAPRRARVRMSEQTTGLEEQTEWPPPIVGAVRLRLLTESTCADLRGPTACALQS 174 Query: 130 TSLKYQYPPLRTLGPEPADNSFNA--IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + LGP+P + + T KK + + L++Q +V+GIGN+Y E Sbjct: 175 PDEVAA--TIAKLGPDPLVDDVSEGEERFTATVRKKPTAIGLLLMDQSVVSGIGNVYRAE 232 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG--- 244 L+RA+ +P R + P++++ ++ ++ ++L ++ G D + + Sbjct: 233 ILFRARQNPHTPGRDV------PEEVVREMWRDWVRLLSIGVETGQMMTMDDLDPEAYRR 286 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ + + VY + G PC CG + AGR ++C CQ Sbjct: 287 AMAHRDDRHWVYHRAGLPC-RVCGTTVLMEEAAGRKLYWCPTCQ 329 >gi|269127507|ref|YP_003300877.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] gi|268312465|gb|ACY98839.1| DNA-(apurinic or apyrimidinic site) lyase [Thermomonospora curvata DSM 43183] Length = 259 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T + P + + RG+++ + R K+L Sbjct: 1 MPEGDTVWLAARRLHRALAGWALTVCDVR-------VPRYATTDLRGQRVREAVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI ++G LS+ VHL M G ++I P+ + + ++L N + Sbjct: 54 LIRVDGGLSVHVHLKMDGRWLIRPAG-----PVPRDHRIRLALGNERHLAL-------GY 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 R G ++++ T+ + + LGP+ ++ + + + A+++Q ++AG Sbjct: 102 RLGVVEVLPTAAEEC--AVGHLGPDLLGPDWDPQEAVRRLRARPERAIGEAVMDQSVLAG 159 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + + P R + D+ ++L++ + + Sbjct: 160 IGNIYKSELCFLRGVHPWRPVAEAGDLHAL-VDLAHRLLEANKN--------------RH 204 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 H+ VYG+ G PC CG I + Q R TF+C CQ Sbjct: 205 GHVTTGDLRPGRTHWVYGRAGRPC-RRCGARIEQAEQGPPGWERLTFWCPGCQ 256 >gi|41407426|ref|NP_960262.1| hypothetical protein MAP1328c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395778|gb|AAS03645.1| hypothetical protein MAP_1328c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 262 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 34/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ + ++++H GM+G A+ +H + +SL + Y D Sbjct: 61 LVLPTD-GPTLLIHSGMTGRPYYCADGAAED----RHQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA--IYLTHQFHKKNSNLKNALLNQKIV 177 R+ + L + P GP+ LT + ++ LK+AL++Q ++ Sbjct: 110 RKLRGVWLADDPDDL-VPITGRQGPDALGLGLRDFRDALTARSARR-RQLKSALMDQSVL 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 168 AGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG----- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A +P CG + GR+T +C CQ Sbjct: 217 ---RVPGLPRWLTGA----RDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|302771624|ref|XP_002969230.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] gi|300162706|gb|EFJ29318.1| hypothetical protein SELMODRAFT_170576 [Selaginella moellendorffii] Length = 268 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 34/279 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT-VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + K + + + P K+I+ R+ K Sbjct: 1 MPELPEVEAARRAVELHCKGLICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGKQ 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK---------NPQHNHVTISLTNNTNTK 110 L +EL+ SI GM+G+ ++ K ++ +++ V + L Sbjct: 61 LWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEMS 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D RRF + L++ PP+ LGP+ + KK + +K Sbjct: 121 -----FTDKRRFARVRLIQDPRLS--PPISELGPDAYTELPDETTFADSVAKKKTAIKAV 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +AGIGN E L+++++ P + +L + +L I++V++ A+D Sbjct: 174 LLDQSFIAGIGNWIADEVLYQSRIHPEQPASTLTAID------CERLRGAIKEVVMTAVD 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 +D + F + + + G+ S G+ Sbjct: 228 -----------VDADLERFPRDWLFHHRWGKKPGSVNGE 255 >gi|152967464|ref|YP_001363248.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151361981|gb|ABS04984.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 265 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 108/287 (37%), Gaps = 27/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R+ ++ + + RF +A + ++ K+LL Sbjct: 1 MPEGHSVHRSARDLLARFGGGVVLVGSPQGRF---AEGAALLDERALVATEAHGKHLLAR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG ++ VHLG+ G + + P V + L + D R Sbjct: 58 FEGGRTLHVHLGLYGRWTFGEGAPEAPR-----GQVRLRLEGER-------AWADLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++++ + LG +P + + + + L+ Q++VAG+G Sbjct: 106 ACEVLDPAGVAA--LHARLGEDPLRPDADPGAAHARISRSRVGVGALLMQQEVVAGVGTT 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 + E L+R + P R R L + D++ + ++ I ++ ++ Sbjct: 164 FRAEVLFRNGVDPFRPGRELARAEWDAVWADLVRLMAAGVRAGRIV------TTRPEHRS 217 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS ++F VYG+ G+PC C + + AGR +C CQ Sbjct: 218 RRGSPSR-ADSFYVYGRAGQPC-RVCSTPVEATLVAGRHLMWCPTCQ 262 >gi|171682424|ref|XP_001906155.1| hypothetical protein [Podospora anserina S mat+] gi|170941171|emb|CAP66821.1| unnamed protein product [Podospora anserina S mat+] Length = 314 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 40/310 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV I L + + T+ + F SAA G+K+I + Sbjct: 1 MPEIAEVARIVHFLRLHLVGKTIRTASAVDDQIVFGKAGTTGDAVSAALTGRKVISSGSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 K + L+ +++H GM+G I T P++ ++ Sbjct: 61 GKLFWLVLDKAPHVVMHFGMTGWLQIRGVQTSYSSLYRDTDTRVETWPPKYTKFHLT--- 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA--DNSFNAIYLTHQFH 161 T V + D RR + LV+ + + PL+ GP+P + F Y + Sbjct: 118 TTCNPAVEVAFTDYRRLARVRLVDCPGAHIRSHAPLKENGPDPVQDTDRFTLAYFQSKCR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + +K LLNQK ++GIGN E L+++++ P +K L L + I Sbjct: 178 ASRAAVKAMLLNQKFISGIGNWVGDEVLFQSRIHPEQKCNHLTDAQT------KTLYEVI 231 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGE--PCLSNCGQMIRRIVQAGR 279 + V A+ G H S F+ +S G P L G+ + + R Sbjct: 232 RYVCQTAVGVLGD-----YHQFPSDWLFKYRWS----KGSENPTLPG-GEPLAHVTVGNR 281 Query: 280 STFYCTYCQK 289 ++ Y T QK Sbjct: 282 TSCYATRLQK 291 >gi|254775599|ref|ZP_05217115.1| hypothetical protein MaviaA2_13153 [Mycobacterium avium subsp. avium ATCC 25291] Length = 262 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 34/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ + ++++H GM+G A+ +H + +SL + Y D Sbjct: 61 LVLPTD-GPTLLIHSGMTGRPYYCADGAAED----RHQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA--IYLTHQFHKKNSNLKNALLNQKIV 177 R+ + L + P GP+ LT + ++ LK+AL++Q ++ Sbjct: 110 RKLRGVWLADDPDDL-VPITGRQGPDALGLGLLDFRDALTARSARR-RQLKSALMDQSVL 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 168 AGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG----- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A P CG + GR+T +C CQ Sbjct: 217 ---RVPGLPRWLTGA----RDAPNPHCPRCGARLDHARVGGRTTLWCPRCQ 260 >gi|255324058|ref|ZP_05365183.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] gi|255298915|gb|EET78207.1| formamidopyrimidine-DNA glycolase [Corynebacterium tuberculostearicum SK141] Length = 271 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 103/290 (35%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RF G++I K+L + Sbjct: 1 MPEGHVIHRLANKFNADFRGMPLRVTSPQGRFAAEAEL---LDGERIELAETYGKHLFVH 57 Query: 64 L---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ G E + + + N R Sbjct: 58 FSAQDPRHILYIHLGLIGKLRFEPREEVG-------GQIRVRIDNGAEAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ L +G +P + L HK ++ + +++Q + AG+ Sbjct: 104 GPQFCRLLTEEEYRAQ--LAKVGQDPLRADADVEALWDTVHKSRRSIGSLMMDQHLYAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R LSP R + + + T D++ + ++ ID + S + Sbjct: 162 GNIYRAETLFRHGLSPFLPGRDVSRETFDATWADLVDLMEYGVEHGRIDTVRPEHSP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG + V GR+ F+C CQ Sbjct: 220 AMGREPRKDDHGGEVYVYRRAGLPCY-ICGTPVAEKVMEGRNLFWCPTCQ 268 >gi|238920756|ref|YP_002934271.1| endonuclease VIII [Edwardsiella ictaluri 93-146] gi|238870324|gb|ACR70035.1| endonuclease VIII [Edwardsiella ictaluri 93-146] Length = 291 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 32/291 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + L + T+T + +L+ +A G ++ + R K L Sbjct: 1 MPEGPEIRRVADELRAAVGGGTLTQVWFGVPSLQRH-----AAGLVGCRVTTIEARGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI +S+ H + G + + T P + V + ++ ++Y+ Sbjct: 56 LIHFSNGVSMYSHNQLYGIWRVAATGQIPPTS--RSLRVRLE-----TAERAILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L + ++P L +GP+ D + + + + + L LL+Q+ + Sbjct: 109 ----IQLAPRAQILRHPFLLRIGPDVLDPALTEVQVRERLCSPAFRRRQLGALLLDQRFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+ +L P R+ L T + + V ID G Sbjct: 165 AGLGNYLRVEILWQVELPPQRRATDLTPAQLTSLCHALLAVPRLSYVTRGQIDTG----- 219 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G++ F V+ + GE C CG + R A R + C CQ Sbjct: 220 ---RHHGTL----FRFRVFQREGESC-ERCGTTLIRAQVASRPFYGCPGCQ 262 >gi|319947983|ref|ZP_08022160.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] gi|319438329|gb|EFV93272.1| DNA-formamidopyrimidine glycosylase [Dietzia cinnamea P4] Length = 278 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 19/288 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + + RF G+ + K+L Sbjct: 1 MPEGHTLHRLARLHTEYFAGGPVRVSSPQGRFAD----HVVVDGRHFDRATAVGKHLFHH 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EG L++ VHLG+ G T ++P + + + D R Sbjct: 57 YEGGLAVHVHLGLYG---FFDTHLVPEGQDPPAPVGQVRMRVGAIADGAPAHWVDLRGPT 113 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++ + LGP+P D + + + L++QK++AG+GN+ Sbjct: 114 RCEVIAEAEVGAVRD--RLGPDPLDPDAEPERAWARIARSARPIGALLMDQKVLAGVGNV 171 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E L+R + P R + L + + ++ ++ + G H Sbjct: 172 YRAEVLFRHGIDPFRPGKDLDRAQFD------AVWDDLVALMEIGVRTGAIHTIRPEHDH 225 Query: 244 G---SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G G + VY + G C CG +R+ R+ ++C CQ Sbjct: 226 GDVPRRGADRPRNYVYQRDGWEC-RVCGDQVRQQAMEARTLYWCPTCQ 272 >gi|227548550|ref|ZP_03978599.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] gi|227079379|gb|EEI17342.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium lipophiloflavum DSM 44291] Length = 264 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 103/287 (35%), Gaps = 26/287 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + RFD +++ K+L I Sbjct: 1 MPEGHVIHRLAAHLNSGFRGGPLSVSSPQGRFDASPIDASSL-----TLAEAHGKHLFIC 55 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ GS E + + + R Sbjct: 56 FSTGHIVYIHLGLIGSLRFEPARDV-------WGQIRLRIVAGDVAANL-------RGPQ 101 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 F V + L G +P + + L + + + +++QK++AG+GNI Sbjct: 102 FCRYVSPAEMQAI--LDRTGEDPLRDDASPDALFARVGASKRTIGSLMMDQKLLAGVGNI 159 Query: 184 YVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y EAL+R +SP L ++ + D++ + ++ ID + + + + Sbjct: 160 YRAEALFRQGISPFVPGCQLERDAFDAVWADLVSLMRYGVEHGRIDTVRDEHTP--EAMG 217 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D VY + GEPC CG+ I GR+ F+C CQ Sbjct: 218 RDPRKDDHGGEVYVYRRAGEPCF-VCGEPIAVRKVEGRNLFWCPKCQ 263 >gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 287 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 24/287 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EVE R+ + VT + LH K R P A G + AK Sbjct: 1 MPELAEVEFFRKRWDHAARGRRVTAVRLHPHAKIFRGTSPSTLRHALTGAVLESSDAAAK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGMSG +E C +H+H+ + +T K+ +++ND Sbjct: 61 QMLFRFSDEIWLGVHLGMSGELRVEPAGCPA----GRHDHLVL------DTAKHALVFND 110 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 PR FG + L + + + P +F + H++ +K LL Q+ Sbjct: 111 PRMFGRVLLHRGAEPPVW--WTKIAPPILSAAFTPAAVREFLHRRGRAPIKAVLLMQERF 168 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIGN E LWRA + P SL + L++ + + ++ +D I G SL Sbjct: 169 PGIGNWMADEILWRAGIHPRTAAGSLTEAQSK---TLWREARHVCRMALDTIAGRGRSLP 225 Query: 238 DYVHID-GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 ++++ F + + G+ G ++ R GR+T + Sbjct: 226 RDLNVNIPDTWLFHHRWQPGGR-----CPRTGVLLERAEIGGRTTCW 267 >gi|295836191|ref|ZP_06823124.1| endonuclease VIII [Streptomyces sp. SPB74] gi|197695294|gb|EDY42227.1| endonuclease VIII [Streptomyces sp. SPB74] Length = 279 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 110/294 (37%), Gaps = 41/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 17 MPEGDTVFHTARRLDAALSGRRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 69 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H + YR+ Sbjct: 70 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAVLGNEARTAVGYRL------ 122 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 123 --PVVELLRTADEDR--AVGHLGPDLLGPDWDAGAALARLLAAPERPLGEALLDQRNLAG 178 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + +++P + P + +L+ + Sbjct: 179 IGNVYKSELCFLLRVTPWTPVGDVPGVERAPA-LAARLLHANRDTFRRV----------- 226 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + G VYG+ PCL CG +R Q R T++C CQ+ Sbjct: 227 -----TTGRRDTPLYVYGRARRPCL-RCGTPVREAEQGDGTRARPTYWCPGCQQ 274 >gi|260903954|ref|ZP_05912276.1| formamidopyrimidine-DNA glycosylase [Brevibacterium linens BL2] Length = 281 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 25/289 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV+ + L + VT + ++ A G +I VSR K L Sbjct: 1 MPELPEVDALVTFLRPRIVGEFVTRTDIGELSILKTADPPL-EALNGLEITGVSRVGKSL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDP 119 ++ + L ++ +G + P++ + + + L + + + Sbjct: 60 IVAFD-GLELVCRFARAGWLVWHELVPTGPVRMGKGPLALRLHLASG---AGFDISEAGT 115 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++ LV + + + P + GP+ S +A T + +K L +Q +++G Sbjct: 116 KKNAAASLV--ADRSEVPAIANAGPDAL--SIDAAEFTATLAGSTARIKTVLEDQSLISG 171 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A+LSP + + L+ I++VL A +A Sbjct: 172 IGNAYSDEILHTAQLSPFATANGVDAPS---------LLDTIREVLGHAREALIDLPPAK 222 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V G F V+G+TG+ C CG I + + +S YC CQ Sbjct: 223 VKAAKKRG-----FRVHGRTGKTC-PVCGSTIAEVSYSDKSLQYCPGCQ 265 >gi|332671950|ref|YP_004454958.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] gi|332340988|gb|AEE47571.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas fimi ATCC 484] Length = 308 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 116/323 (35%), Gaps = 49/323 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R L + + RF G++++ V K L Sbjct: 1 MPEGHTVHRIARQLRRDFVGHRIA---VTSPQGRFAAGAE---RLDGRELVGVEAVGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFI-------IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 +G + VHLG+ G++ I A + + + + Sbjct: 55 FATFDGGDVLRVHLGLYGAWDFHGVVSPIVDGQVAVGSMGAPRLRRAVRMGEGEHELRGG 114 Query: 114 VI---------------------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-NSF 151 D R ++++ + LGP+PA + Sbjct: 115 ADAPVFPPEPVGAVRVRLATTQSVADLRGPTACEVLDPVAAQAV--VDRLGPDPASTDDL 172 Query: 152 NA--IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 +A + + + + L++Q +VAGIGNIY E L+RA+L P R + Sbjct: 173 DAAQEVVVQRVTSRTVAVGQLLMDQSVVAGIGNIYRAELLFRARLDPHTPGRRV------ 226 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS---IGYFQNAFSVYGKTGEPCLSN 266 P D++ L ++ +L D I G R+ + +G + + VYG+ G PC Sbjct: 227 PPDVVRALWRDWVVLLDDGIRVGAMITREDLDAEGRAQALADPRQRHWVYGRAGLPC-RV 285 Query: 267 CGQMIRRIVQAGRSTFYCTYCQK 289 CG + A R ++C CQ+ Sbjct: 286 CGTPVIVEEMATRKLYHCPVCQR 308 >gi|290960360|ref|YP_003491542.1| DNA repair hydrolase [Streptomyces scabiei 87.22] gi|260649886|emb|CBG73002.1| putative DNA repair hydrolase [Streptomyces scabiei 87.22] Length = 274 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 27/293 (9%) Query: 4 LPEVEIIRRNLMMVMK--NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE I R + + +F +A G + K+L Sbjct: 1 MPEGHTIHRLAEDCLAHFGGDGRPTHVTSPQGKF---ADAAALLTGTPLHTAEAHGKHLF 57 Query: 62 IEL---EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + + + +HLG+ G P + V + L ++T+ Y D Sbjct: 58 LHFGDPDAEERVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLRDDTS-------YMD 105 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R L+ + K LGP+P + + + + + LL+QK++A Sbjct: 106 LRGPTTCALITEAEKRAVH--ARLGPDPLRADADPARAYARVSRSRTTIAALLLDQKVIA 163 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 G+GN+Y E L+R + P R + + D++ + + ++ ID + + Sbjct: 164 GVGNVYRAEVLFRHGIDPYRAGKDITPAEWDAIWTDLVGLMREGVRHNRIDTVRPEHTP- 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + PC CG +R A R+ F+C CQ+ Sbjct: 223 -EAMGRPPRVDDHGGEVYVYRRAALPC-HLCGGEVRTADLAARNLFWCPACQQ 273 >gi|225873334|ref|YP_002754793.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225793175|gb|ACO33265.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 298 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 108/291 (37%), Gaps = 20/291 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L H + G+ I V R K+L Sbjct: 1 MPEGDTIFRSARTLHKALAGTIVTGFVTEFAQL---AAVHDNTPVTGRTIEQVESRGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ I +H+ + L N T + ++ P Sbjct: 58 LIHFSGDLILVTHMLMSGSWHIYRRGERWRRGR---SHMRVLLANETYE---AIAFDVP- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + + LGP+P F+ + N LLNQ+++AG Sbjct: 111 ---VARFYTSRTLARNSAIPRLGPDPLRADFSAGDAAARIAAHPQEEIANVLLNQQVIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E + LSP + L + + + + + +GG Sbjct: 168 LGNVFKSEVCFVCGLSPFARVHELSPDQVAALLAAA---ERLMNINVSDAASGGVITYTG 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 ++ VYG+ G+ C CG I Q RST++C CQ Sbjct: 225 ARRTRNVSDAGARLWVYGRRGQAC-RRCGATILMRKQGSAARSTYWCPQCQ 274 >gi|297582947|ref|YP_003698727.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] gi|297141404|gb|ADH98161.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] Length = 274 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 108/294 (36%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + N + ++ L+ + + V + K L Sbjct: 1 MPEGPEIRLAADEVEHAVLNKPLLEVFFGLPPLK-----DYEDILTRATVNRVQTKGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + S+ H + G + I KP + + + L +T + + Sbjct: 56 LTHFDNGYSVYSHNQLYGKWYI------KPSYSYPKTNRQLRLALHTGDRSALLYSASD- 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK---NSNLKNALLNQKIV 177 + ++ T +P ++ GP+ L Q K N L LL+Q + Sbjct: 109 ----IAVLRTDEVPDHPFIKKTGPDILSEPVTVNDLLRQMTDKRFFNRQLGGLLLDQTFI 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AGIGN E L+ + P ++ L L +L + + ++ + + G +L Sbjct: 165 AGIGNYLRTEILFITGIHPKKRPADLSDT------ALIRLAEAVILMMTRSYETKGLTLD 218 Query: 237 RDYVHIDGSIGYFQNAFS--VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G ++ + + + EPC C I +I A R + C CQ Sbjct: 219 PERVQTKKAAGEPRSHYRHFAFNRHMEPCY-QCRTAIEKITVASRRLYVCPVCQ 271 >gi|254776704|ref|ZP_05218220.1| hypothetical protein MaviaA2_18836 [Mycobacterium avium subsp. avium ATCC 25291] Length = 250 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 96/293 (32%), Gaps = 47/293 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + ++ R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLLGETLTRCDIR-------VPRFATVDLTGQVVDEILSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + + +H + + V R Sbjct: 54 FIRV-GAASIHSHLKMEGSWRV--------GPRVRVDHRARIVLETGSATAVGVDLGVLR 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 + LGP+ ++ + + ALL+Q+++AG Sbjct: 105 IL--------DRDRDGEAVAHLGPDLLGEDWDPARAAANLVARPQRPIAEALLDQRVLAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + P ++ +D+L+ + G Sbjct: 157 IGNVYCNELCFVSGQLPTAPVSAVADPRRLVSRARDMLWLNRFRWNRCTTGDTRNG---- 212 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG I R T++C CQ+ Sbjct: 213 --------------RQLWVYGRAGQPC-RRCGTPIEFDDSGDRVTYWCPSCQR 250 >gi|153003378|ref|YP_001377703.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026951|gb|ABS24719.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ + ++ + + L + A GK++ DV R K + Sbjct: 1 MPELPDIEVYVEAIAARVRARPLLRVRLGSPFVLRSVDPPLGEA-AGKRVEDVRRVGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ LEG+L + +HL ++G P + + + T + + Sbjct: 60 VLALEGDLFLALHLMIAGRLHWREAGAKLPGRVGL---AALDFEDGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + L G EP D + ++N LK AL + +++GI Sbjct: 113 RRAAIHLVRGAAALA--ALDRGGIEPLD--ADLAAFRAALTRENHTLKRALTDPSLLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP++ T L L +L + VL + D Sbjct: 169 GNAYSDEILHRARLSPVKLTSRLTDEE------LARLHAATRAVLTEWTDRLRREAAG-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREEMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|302754324|ref|XP_002960586.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] gi|300171525|gb|EFJ38125.1| hypothetical protein SELMODRAFT_75016 [Selaginella moellendorffii] Length = 268 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 34/279 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT-VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + + K + + + P K+I+ R+ K Sbjct: 1 MPELPEVEAARRAVELHCKGLICRASVADDTTVIEGMAPFDMQRRLVAKRIVAAHRKGKQ 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIK---------NPQHNHVTISLTNNTNTK 110 L +EL+ SI GM+G+ ++ K ++ +++ V + L Sbjct: 61 LWLELDEPPSICFQFGMAGAVYVKGVKSTKYVRSAVKDEDEWPSKYSKVHLVLDTGVEMS 120 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNA 170 + D RRF + L++ PP+ LGP+ + KK + +K Sbjct: 121 -----FTDKRRFARVRLLQDPRLS--PPISELGPDAYTELPDETTFADSVAKKKTAIKAV 173 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q +AGIGN E L+++++ P + +L + +L I++V++ A+D Sbjct: 174 LLDQVFIAGIGNWIADEVLYQSRIHPEQPASTLTAID------CERLRGAIKEVVMTAVD 227 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ 269 +D + F + + + G+ S G+ Sbjct: 228 -----------VDADLERFPRDWLFHHRWGKKPGSVNGE 255 >gi|94967411|ref|YP_589459.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Candidatus Koribacter versatilis Ellin345] gi|94549461|gb|ABF39385.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Koribacter versatilis Ellin345] Length = 275 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 112/294 (38%), Gaps = 24/294 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L A G+ ++DV R K++ Sbjct: 1 MPEGDTIFRAARTLQRALAGKVVTRFETVLPKLARVDED---APLAGRTVVDVEARGKWM 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G+L ++ H+ MSGS+ I + + +++ + T++ +RV Sbjct: 58 LMHFSGDLILLTHMLMSGSWHIYRPG--EQWQRSRNDMRVVIETSDILAVAFRVPVA--- 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + L LG + F+ + L + LL+Q ++AG Sbjct: 113 -----EFHTEESLKRRARLNQLGDDLLGAEFDIPASVERLRAHGDLELGDTLLHQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GN++ E + +L P RK SL + +L + + + + D G + Y Sbjct: 168 PGNVFKSEICFACRLDPFRKISSLSEEE-----LLRVATKARELMTSNVSDTSGDKIVTY 222 Query: 240 VHIDGSIGYFQ--NAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + G VYG+ G PC CG I Q R T++C CQ+ Sbjct: 223 TGFRRTTGRSDPYERLWVYGRAGLPC-RRCGTRIEVKRQGAQARKTYFCPECQR 275 >gi|297625920|ref|YP_003687683.1| formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921685|emb|CBL56242.1| Formamidopyrimidine-DNA glycosylase (DNA-formamidopyrimidine glycosylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 271 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 106/291 (36%), Gaps = 27/291 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++ R + + + RF +A G ++ K+L + Sbjct: 1 MPEGHVLHRLAARFNELFADEQVQVSSPQGRF---AESAALIDGSTLVQAQAWGKHLFVR 57 Query: 64 LEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G + P V + + + T D R Sbjct: 58 FDAPIADPIVHIHLGLIGKLSFTELA-------PPVGQVRVRINDGTWA-------ADLR 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L+ + + LG +P + + + H+ + + L+NQ I AG+ Sbjct: 104 GPQICRLISEDEEAAAT--KKLGADPLRSDSDPERAWTKVHRSGKPIASLLMNQAIFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R ++ P L + + D++ + ++ ID + + + Sbjct: 162 GNIYRAEVLFRHRIDPQCPGNKLHRASFDLMWNDLVQLMRLGVRDGRIDTVYPEHTP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + +PCL CG I GR F+C CQ+ Sbjct: 220 ALGRPPRVDAHGGEVYVYRRADQPCL-VCGSPIHETTLEGRHLFWCGRCQR 269 >gi|271963707|ref|YP_003337903.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] gi|270506882|gb|ACZ85160.1| DNA-(apurinic or apyrimidinic site) lyase [Streptosporangium roseum DSM 43021] Length = 263 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 114/293 (38%), Gaps = 41/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P H +A G+ +++ R K+L Sbjct: 1 MPEGDVVYRTARRLGEALDGRILTRSDFR-------VPRHATADLTGRAVLETVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++G L++ HL M GS+ I + P + V + L N Sbjct: 54 LTRVDGGLTVHTHLRMEGSWRISPAG----RRPPSGDVVRLVLANADWQAVGV------- 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 R G +DLV T + + + LGP+P ++ + + ALL+Q+ +AG Sbjct: 103 RLGMVDLVATGEE--HRLVGHLGPDPLGPDWDPAEAVRRLMGSPGLTIGEALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IG +Y E L+ A +SP R + ++ I + + A G R Sbjct: 161 IGTVYRAETLFLAGVSPWRPVGEVED------------VRRIVALAQRLLHANGERERRV 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 D G VYG+ G PCL CG+ I R R F+C +CQ Sbjct: 209 TTGDARPGR---DTWVYGRAGRPCL-RCGRRISRGEMGAQPQERLIFWCRHCQ 257 >gi|238063417|ref|ZP_04608126.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] gi|237885228|gb|EEP74056.1| formamidopyrimidine-DNA glycosylase [Micromonospora sp. ATCC 39149] Length = 273 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 103/299 (34%), Gaps = 45/299 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L G + + + R K+L Sbjct: 1 MPEGDTVWNTARVLGRALGGARLTASDFRVPRLAGTD-------LAGWTVRESASRGKHL 53 Query: 61 LIELEG----------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ L ++ HL M G++ + + P H + + Sbjct: 54 LLRLAAPAPVGSGGVTGWTLHSHLRMDGAWR-AYAPGERWTARPAHLIRAVLRAPDAVAV 112 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKN 169 Y + +L + + LGP+ ++ + + + Sbjct: 113 GYHL----------HELALVPTAEEGALVGHLGPDLLGADWDPTEAVRRLAAHPEATIGE 162 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q+ +AG+GN+Y CE L+ +SP ++ GT + +L+ + + Sbjct: 163 ALLDQRNLAGVGNLYKCEVLFLRGVSPWTPVGAVSDLAGTVA-LAQRLLAANRGRWTQST 221 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS R VYG+ +PC CG IR+ R T++C CQ Sbjct: 222 T--GSLRRGETS------------YVYGRRAQPC-RRCGTAIRKQELGERVTYWCPICQ 265 >gi|323359501|ref|YP_004225897.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323275872|dbj|BAJ76017.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 274 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 112/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PEVE + L + TV ++ L + G+++ +R K+L Sbjct: 1 MPEAPEVEALTLFLRERLGGHTVREVDLLEGRALKTRARPLTE-LIGRRVTGATRHGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++LE + + + G +G T A + +P + L N + D Sbjct: 60 DLDLE-GVHLGIGFGRAGWATWRDTGEAD-VDSPAPEIARVVLDNG------ILGITDAG 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L P + LGP+ D ++ L + LK L Q+ +AGI Sbjct: 112 EWLSVQLHVVDAPQDVPAVAKLGPDAVDPGYSREMLAEALGGRRKQLKALLQEQETLAGI 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L+ A+LSP SL + D + +L + L A+ A R V Sbjct: 172 GNAYSDEILYAARLSPTAHASSLSE------DDVTRLHLALHDTLTAAVIA-----RRGV 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I + V+G+ GEPC G +I I + +C CQ Sbjct: 221 PIAEQKAAKVASMRVHGRAGEPCPEGDG-VIEDIPGTKGAGQWCPSCQ 267 >gi|149186671|ref|ZP_01864982.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] gi|148829579|gb|EDL48019.1| DNA-formamidopyrimidine glycosylase [Erythrobacter sp. SD-21] Length = 260 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 113/290 (38%), Gaps = 31/290 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFS-AATRGKKIIDVSRRAKY 59 MPELPE E R L + T+ + L + P A G++ + R K Sbjct: 1 MPELPENEAQRLTLERECLHRTIEAVELGEDVTYIELPGDNERARLVGRQFTETRRHGKN 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + VHLGM+G + P H + I R+ + P Sbjct: 61 IFAGSKTGPWMTVHLGMTGKLVPFDAPDDPPD----HTKLLIRFE-----GDRRLAFQCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ G + +++ Y LGP+ + + F S +K+AL+ Q +AG Sbjct: 112 RKLGHVRVIDDPASYLED--EGLGPDALE--VSCEQFVQTFGSTRSAIKSALMKQDKMAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN++ E L++ + P + +L + D+L + ++++L + S Y Sbjct: 168 IGNLWSDETLFQTGIHPEARANALGE------DVLSDIHAAMRRILKGVVRVEAS----Y 217 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + K+G C CG I GR+ ++C QK Sbjct: 218 EDLPEA------WLIRHRKSGAEC-RRCGGTIVSTKVGGRTAYFCDKHQK 260 >gi|227541406|ref|ZP_03971455.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182957|gb|EEI63929.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] Length = 259 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 30/288 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF G ++ID K L Sbjct: 1 MPEGHVIHRLARTLTDTFGGKP---VDVSSPQGRFSTEADV---LNGAELIDAFAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G I +HLG+ G F + + + V + + + D Sbjct: 55 FIRFAGERYIHIHLGLIGKFKVAPLAAPVGV-------VRLRIADGEMA-------ADLH 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + LV S + LG +P +N + + + AL++Q + AG+ Sbjct: 101 GPQWCRLVLKSDVE--KAVEKLGSDPLENG----AIAPNLARVGRTIGAALMDQSLYAGV 154 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+R ++SP ++ D++ + + ID + A S + Sbjct: 155 GNIYRCEVLFRQRISPFAPAVAV-DGQAIWDDLVQLMEYGARTGRIDTVRAEHSP--EAQ 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PCL CG + V GR ++C CQ Sbjct: 212 GRPPREDAHGGEVYVYRRAGQPCL-VCGTPVEMTVDGGRKLYWCPTCQ 258 >gi|31789403|gb|AAP58519.1| putative formamidopyrimidine-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 111/289 (38%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+VE+ L + + + L L A + + + R K + Sbjct: 1 MPELPDVELYLDALRRRIVGQPLESVRLASPFLVRSIDPPLDRAV-NRVVRGLRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EL+G+L I++HL ++G F + P K N T + + Sbjct: 60 VWELDGDLFIVIHLMIAGRFRWKERGAGIPGKIGL---AAFDFPNGT----LLLTEAGSK 112 Query: 121 RFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + + + P G EP D S ++N +K +L + +++G Sbjct: 113 RQASLHVAAGERALASHDPG---GIEPLDASL--EQFAQVLRRENHTIKRSLTDPHLLSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A++SP++ T + + +L L D Sbjct: 168 IGNAYSDEILHAARMSPMKLTSQMGDAE------IERLYAATIDTLSSWRQRLLVETGD- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + F++ +V+G+ G+PC C ++RI A YC CQ Sbjct: 221 -NFPEKVTAFRDGMAVHGRYGKPC-PVCEDPVQRIRYAANEANYCPTCQ 267 >gi|311893869|dbj|BAJ26277.1| putative DNA glycosylase/AP lyase Nei [Kitasatospora setae KM-6054] Length = 263 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 109/290 (37%), Gaps = 36/290 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + ++ L + +T P H +A G+++++ R K+L Sbjct: 1 MPEGDSIYLVATQLNRALSGHPLTASDFR-------VPAHATADLTGRRVLETVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L EG +++ HL M G + + P + T N YR+ Sbjct: 54 LTRFEGGVTLHTHLRMDGRWQTFQPG-ERWRSGPAFQIRVVLGTGNGTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 + L+ T+ +++ + LGP+ ++A + L ALL+Q ++AG Sbjct: 107 --PVVQLLRTAEEHRV--VGHLGPDLLGPDWDAAEARRRLLADPRRPLGAALLDQHVLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + A ++P L + D +L+ + Sbjct: 163 IGNVYANELPFLAGVTPWLPVGDLPDPDEL-LDGARQLLDANRL--------------RP 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-GRSTFYCTYCQ 288 H+ + VYG+ PCL CG IR R+ ++C CQ Sbjct: 208 GHVTTGDPRPGHRNWVYGRARRPCL-RCGTPIRTAKHDRERAAYWCPRCQ 256 >gi|333024066|ref|ZP_08452130.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] gi|332743918|gb|EGJ74359.1| putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. Tu6071] Length = 263 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 110/293 (37%), Gaps = 41/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTAADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAILGTEARTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVVELLRTADEDR--AVGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + +++P + + + +DA + R Sbjct: 163 IGNVYKSELCFLLRVTPWTPVGDVPRPARATA------------LAARLLDANRDTFRRV 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 T-----TGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|227487698|ref|ZP_03918014.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092392|gb|EEI27704.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] Length = 259 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 30/288 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + RF G ++ID K L Sbjct: 1 MPEGHVIHRLARTLTDTFGGKP---VDVSSPQGRFSTEADV---LNGAELIDAFAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G I +HLG+ G F + + + V + + + D Sbjct: 55 FIRFAGERYIHIHLGLIGKFKVAPLAAPVGV-------VRLRIADGEMA-------ADLH 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + LV S + LG +P +N + + + AL++Q + AG+ Sbjct: 101 GPQWCRLVLKSDVE--KAVEKLGSDPLENG----AIAPNLARVRRTIGAALMDQSLYAGV 154 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY CE L+R ++SP ++ D++ + + ID + A S + Sbjct: 155 GNIYRCEVLFRQRISPFAPAVAV-DGQAIWDDLVQLMEYGARTGRIDTVRAEHSP--EAQ 211 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PCL CG + V GR ++C CQ Sbjct: 212 GRPPREDAHGGEVYVYRRAGQPCL-VCGTPVEMTVDGGRKLYWCPTCQ 258 >gi|294632524|ref|ZP_06711084.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292835857|gb|EFF94206.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 269 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 101/261 (38%), Gaps = 24/261 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDIC-LHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE ++ L + + + + L+ P A G ++ V R K+ Sbjct: 29 MPELPEVEALKDFLTENLVGHEIVRVLPVAVSVLKTYDPP--VTALEGHEVTAVRRHGKF 86 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEH---TSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L +E G ++ HL G +P K P V + + + Sbjct: 87 LDLETGGGPHLVTHLARGGWLQWRDRLPDGPPRPGKGPLALRVALE-----TGAGFDLTE 141 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 ++ + +V + P + LGP+P + F+ + +K AL +Q + Sbjct: 142 AGTQKRLAVYVVRDPRE--VPGVARLGPDPLADDFDEERFARLLAGERRQIKGALRDQGL 199 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN Y E L A++SP ++T +L + L ++ L +A++ Sbjct: 200 IAGVGNAYSDEILHAARMSPFKRTAALTDEE------IAGLYAALRTTLTEAVERSRGVA 253 Query: 237 RDYVHIDGSIGYFQNAFSVYG 257 + + G V+G Sbjct: 254 AGRLKAEKKSG-----LRVHG 269 >gi|319442470|ref|ZP_07991626.1| putative formamidopyrimidine-DNA glycosylase [Corynebacterium variabile DSM 44702] Length = 277 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 109/303 (35%), Gaps = 44/303 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + ++ + RF ++ G + D K+L + Sbjct: 1 MPEGHVIHRLATGLTTRFGGEEVSVVSPQGRFATE---ASLLDGSVLTDAEAWGKHLFVH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ +HLG+ G+ E + + V + + ++T + D R Sbjct: 58 FTAG-TVHIHLGLIGTLQFEPLAVPR-------GQVRLRIADDT-------VAADLRGPQ 102 Query: 124 FMDLVETSLKYQYPPLRTLGPEPAD-----------NSFNAIYLTHQFHKKNSNLKNALL 172 LV + + LG +P N+ + + + + L+ Sbjct: 103 RCALVTPVEEDA--AVAKLGVDPLRVVGGGTPAGELNARKLETALAKTRRSSKPVGALLM 160 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q + AG+G+IY E L+R + P R +SL L + ++ ++ AG Sbjct: 161 DQALYAGVGSIYRTEVLFRLGIDPTRPGKSLTTAE------LDDIWSDMVDLMTYGEVAG 214 Query: 233 GSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 H ++G VY + G PCL CG + AGR ++C Sbjct: 215 RIDTVRPEHTPEAMGRPPRKDDHGGEVYVYRRAGLPCL-VCGTPVETGEMAGRKIYWCPV 273 Query: 287 CQK 289 CQ+ Sbjct: 274 CQR 276 >gi|184200752|ref|YP_001854959.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580982|dbj|BAG29453.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 306 Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 110/318 (34%), Gaps = 43/318 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + + + + RF +A G+ + K+L Sbjct: 1 MPEGHSVHRLARQLADLFEGQ---QLGVSSPQGRF---AAGAALLDGRVLTRSRAHGKHL 54 Query: 61 LIELEGN------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY-- 112 ++ L + HLG+ G++ + + + Sbjct: 55 YLDFTAPGDSSDVLVLRSHLGIYGAWSFAGDETFAAASSIGAPRRLGERESGSAAAAVAY 114 Query: 113 -------------RVIYNDPRRFGFMDL------VETSLKYQYPPLRTLGPEPADNSFNA 153 V G+ DL V S + LGP+P D + Sbjct: 115 DDAGRVVPEAPVGAVRVRLAGEHGWADLRGPTLCVAESPEEAAAAAAKLGPDPLDPQADP 174 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 K + L+ Q +VAGIGNI+ E+L+R + P+ SL + + Sbjct: 175 EPFLAAAGKSRRPIGVLLMEQHVVAGIGNIFRAESLFRRGVDPMAPGTSLTRED------ 228 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG---YFQNAFSVYGKTGEPCLSNCGQM 270 L +L +E ++ + G D G + ++A VY + G+PCL CG Sbjct: 229 LLELWEENVALMAVGVRVGRIITTDPEDRPGVPDTEAWPEHANYVYHRHGQPCL-RCGAT 287 Query: 271 IRRIVQAGRSTFYCTYCQ 288 + + GR ++C CQ Sbjct: 288 VLKTDLNGRGLYWCPSCQ 305 >gi|256824011|ref|YP_003147971.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256687404|gb|ACV05206.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 314 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 46/316 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L ++ V ++ L + + G+ + DV R K L Sbjct: 1 MPELPEVEGLAAALRERLEGRVVAEVALASFSALKTV-DVLPQSLHGRPVDDVRRYGKLL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + ++ ++VHL +G ++ + V + +T + + + R Sbjct: 60 DLVVD-GTHVVVHLMRAGWVTWHDEVPRTRLRPGGKSPVAVRITLDDGS-GMDLYEAGTR 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPE------PAD---------------------NSFNA 153 + + L + + L TLGP+ P + Sbjct: 118 KGMAVYLADDPGTLE--ALTTLGPDAVSLRPPLESPPLVGVDTTTGEVGVTASTTPEERV 175 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + + + +K L +Q +V+GIGN + E L A+LSP +L + Sbjct: 176 AFWVEALEGRRTQIKRVLRDQSVVSGIGNGWSDEILHTARLSPFVLAATL------EAEE 229 Query: 214 LYKLIQEIQKVLIDAIDAG-GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 + +L + + +VL+ A + G + D + V+G+TGE C CG ++R Sbjct: 230 VGRLAEAVHEVLVGAAERAVGRAPADLKDG------KRGGMRVHGRTGEEC-PVCGDVVR 282 Query: 273 RIVQAGRSTFYCTYCQ 288 + A S YC CQ Sbjct: 283 EVTYADSSLQYCATCQ 298 >gi|220919150|ref|YP_002494454.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957004|gb|ACL67388.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter dehalogenans 2CP-1] Length = 321 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K L Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLHLALHLMIAGRLHWKDPGARLPGKAGL---AAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + L G EP D + ++N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALA--ALDRGGIEPLD--VDLAAFAAALRRENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L + ++VL Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|326440923|ref|ZP_08215657.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces clavuligerus ATCC 27064] Length = 269 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 104/288 (36%), Gaps = 22/288 (7%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + +F +A G+ + D K+L + Sbjct: 1 MPEGHTIHRLAEDHRARFLDRPVRVSSPQGKF---SDAAALLDGQPLTDAEAHGKHLFLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + +HLG+ G P + V + LT D R Sbjct: 58 FGALGWVHIHLGLFGKVDFGDAPAPPPT-----DTVRLRLTTPKAHV-------DLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ K LGP+P + + + + + + LL+QKI+AG+GN+ Sbjct: 106 TCALITDGEKTAVH--ERLGPDPLRPDDDPDRVWARLSRSRTTVAALLLDQKIIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E L+R + P R R + + D++ + + ++ ID + + + + Sbjct: 164 YRAEVLFRLGIDPYRAGRDITRAEWDAIWADLVELMREGVRNNRIDTVRP--EHMPEAMG 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG +R A R+ F+C CQ+ Sbjct: 222 RPPRVDDHGGEVYVYRRDRRPC-HVCGTEVRTAGLAARNLFWCPACQR 268 >gi|302522265|ref|ZP_07274607.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302431160|gb|EFL02976.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 263 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 110/293 (37%), Gaps = 41/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRVILGTEARTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVVELLRTADEDR--AVGHLGPDLLGPDWDAEAALARLLAAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + +++P + + + +DA + R Sbjct: 163 IGNVYKSELCFLLRVTPWTPVGDVPRPARATA------------LAARLLDANRDTFRRV 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 T-----TGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|332664166|ref|YP_004446954.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] gi|332332980|gb|AEE50081.1| DNA-(apurinic or apyrimidinic site) lyase [Haliscomenobacter hydrossis DSM 1100] Length = 258 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 112/284 (39%), Gaps = 31/284 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV +R + + +H + R F+ G+ RR KY Sbjct: 1 MPELPEVNTFQRYFDESALQQRIARVDVHDDKIIRNMDGASFAERLHGRTFTGSYRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L +L+ +++H GM+G PI P+H N +++ ++DP Sbjct: 61 LFAQLDNGHHVLLHFGMTGDIKYYED----PIDKPKHERFAFVFDNG-----FQLGFDDP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+F + +E Y LG + S K LK LL Q+ +AG Sbjct: 112 RKFARILYLED--LQAYIDSLPLGEDALRIS--EADFLQLISNKKGQLKAFLLQQQNLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E ++ ++ P + SL + K +L+ +Q+I ++ D+ Sbjct: 168 VGNLYADELCYQTRIHPAARIESLSLED---KKLLFTTLQKILNYAVERRAYYKDYPEDW 224 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + G+ G+ ++R+ AGR+T++ Sbjct: 225 LWQWRVEGFVPP-------DGK-------GVVRKGTIAGRTTYF 254 >gi|23309003|ref|NP_602196.2| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|21325773|dbj|BAC00394.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] Length = 271 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + KN T + RF +A G +I K+L +E Sbjct: 3 MPEGHVIHRLAGELTKNFGDTILDATSPQGRFTSE---AAIINGHRIAVAEAYGKHLFVE 59 Query: 64 LEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G+ E + + + L++ R Sbjct: 60 FDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANL-------R 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + Q + LG +P + + + + + ++ + L++QK+ AG+ Sbjct: 106 GPQWCRLITDAERTQ--AIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R +SP + + + ++ ++ D + G Sbjct: 164 GNIYRAETLFRLGISPFTIGKDITTAQFRS------IWADLVGLMKDGVVTGRIDTVRPE 217 Query: 241 HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 218 HTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 271 >gi|296118493|ref|ZP_06837071.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] gi|295968392|gb|EFG81639.1| DNA-formamidopyrimidine glycosylase [Corynebacterium ammoniagenes DSM 20306] Length = 279 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 103/290 (35%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R ++ D+ + RF G ++ K+L + Sbjct: 11 MPEGHVIHRLAHTFNQDFRGMDLEVSSPQGRFATEAE---QLDGFRLERAEAFGKHLFLL 67 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + I +HLG+ G F+ E + + + ++N R Sbjct: 68 FDAPSPAHIIYIHLGLIGQFLFEDPES-------RRGQIRLHISNGEQAANL-------R 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ L +G +P + L + + + + LL+Q + AG+ Sbjct: 114 GPQWCRLITEEEYDAQ--LAKVGFDPLIADTDPEPLRVKVQRSKRTIGSLLLDQALFAGV 171 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+IY E L+R ++ P R+ L +D++ + + ID + + + Sbjct: 172 GSIYRTEVLFRQQILPSRRGNELTDAQFAAIWQDLVELMNYGVVAGRIDTVAPEHTP--E 229 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + D VY + G PC C + + GR F+C CQ Sbjct: 230 AMGRDPRKDDHGGEVYVYRREGLPCY-VCNTPVVSQILEGRKVFWCPTCQ 278 >gi|318061010|ref|ZP_07979731.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actG] gi|318078758|ref|ZP_07986090.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces sp. SA3_actF] Length = 263 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 69/293 (23%), Positives = 110/293 (37%), Gaps = 41/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+++ DV+ R K+L Sbjct: 1 MPEGDTVFHTARRLHAALAGQRLTVADLR-------VPRFATADLTGREVRDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L G L++ HL M G++ + + P H I T YR+ Sbjct: 54 LTRLSGGLTLHTHLRMDGAWRVYEAG-ERWRGGPGHQIRAILGTEARTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ L L ALL+Q+ +AG Sbjct: 107 --PVVELLRTADEDR--AVGHLGPDLLGPDWDAGAALARLLAAPERPLGEALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + +++P + + + +DA + R Sbjct: 163 IGNVYKSELCFLLRVTPWTPVGDVPRPARATA------------LAARLLDANRDTFRRV 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 G VYG+ PCL CG IR Q R T++C CQ Sbjct: 211 T-----TGRRDTPLYVYGRAHRPCL-RCGATIREAEQGDGTKARPTYWCPRCQ 257 >gi|302659016|ref|XP_003021203.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] gi|291185091|gb|EFE40585.1| hypothetical protein TRV_04635 [Trichophyton verrucosum HKI 0517] Length = 373 Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 107/308 (34%), Gaps = 49/308 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV I + + T+ + + +L F F GK +I ++ Sbjct: 1 MPELAEVARIVNYIKKHLVGHTIAKVVANHDDLLFGKVGTSADEFKKHMHGKTVIGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIE-----------HTSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G I + + P+ L Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKIRSENTYYRSNGKDENFEADVWPPKFWKF---LLE 117 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFH 161 N K + D RR G + LV+ +Y PL+ GP+P + +L Sbjct: 118 TDNEPKTEAAFVDARRLGRVRLVDCPGDEIRKYTPLKENGPDPVIDKAILTEDWLKALVR 177 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 +K +K LL+Q ++G+GN +L + + +L I Sbjct: 178 RKKVPIKALLLDQANISGLGNWMGD---------------TLRDSQ------IKELHSSI 216 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++D G S F + ++ GK G G+ I + GR++ Sbjct: 217 NYVCSVSVDLKGESSDFPTDWL-----FHHRWN-KGKKGAAGKLPSGEPIVFVTVGGRTS 270 Query: 282 FYCTYCQK 289 QK Sbjct: 271 AVVPSVQK 278 >gi|62391849|ref|YP_227251.1| formamidopyrimidine-DNA glycosylase protein [Corynebacterium glutamicum ATCC 13032] gi|41222996|emb|CAF18941.1| PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE PROTEIN [Corynebacterium glutamicum ATCC 13032] Length = 269 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 35/295 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + KN T + RF +A G +I K+L +E Sbjct: 1 MPEGHVIHRLAGELTKNFGDTILDATSPQGRFTSE---AAIINGHRIAVAEAYGKHLFVE 57 Query: 64 LEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + +HLG+ G+ E + + + L++ R Sbjct: 58 FDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + + Q + LG +P + + + + + ++ + L++QK+ AG+ Sbjct: 104 GPQWCRLITDAERTQ--AIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E L+R +SP + + + ++ ++ D + G Sbjct: 162 GNIYRAETLFRLGISPFTIGKDITTAQFRS------IWADLVGLMKDGVVTGRIDTVRPE 215 Query: 241 HIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 216 HTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CATPIKEQVMEGRNLFWCPGCQR 269 >gi|197124421|ref|YP_002136372.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] gi|196174270|gb|ACG75243.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. K] Length = 321 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K L Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLYLALHLMIAGRLHWKDPGARLPGKAGL---AAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + L G EP D + ++N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALA--ALDRGGIEPLD--VDLAAFAAALRRENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L + ++VL Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLFEATREVLTGWTARLREEAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|302331706|gb|ADL21900.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] gi|308277398|gb|ADO27297.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 281 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 25/288 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + K+ + RF A K+L IE Sbjct: 13 MPEGHVIHRLARELNKHFQGKAPRVTSPQGRFAAEAALIHA---APFYQAHAWGKHLFIE 69 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ GS + AK + + + + R Sbjct: 70 FDAPTPERIVHIHLGLIGSLHFDPIEEAK-------GQIRLRIEGDKVAANL-------R 115 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ T + LG +P + + + + ++ + L++Q++ AG+ Sbjct: 116 GPQWCRLITTEEMEV--AVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGV 173 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R +SP R + +D++Y + + ++ ID + + + Sbjct: 174 GNIYRAESLFRLGISPFTPGREVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTP--QAM 231 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PC CG I V GR+ F+C CQ Sbjct: 232 GRAPRKDDHGGEVYVYRRLGQPCY-VCGTPISGQVMEGRNLFWCPTCQ 278 >gi|118466096|ref|YP_882333.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium avium 104] gi|118167383|gb|ABK68280.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Mycobacterium avium 104] Length = 262 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 116/291 (39%), Gaps = 34/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + V + +H LR + G++ R K+ Sbjct: 1 MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ + ++++H GM+G A+ ++ + +SL + Y D Sbjct: 61 LVLPTD-GPTLLIHSGMTGRPYYCADGAAED----RYQRLVVSLDQG------ELRYTDL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA--IYLTHQFHKKNSNLKNALLNQKIV 177 R+ + L + P GP+ LT + ++ LK+AL+ Q ++ Sbjct: 110 RKLRGVWLADDPDDL-VPITGRQGPDSLGLGLRDFRDALTARSARR-RQLKSALMEQSVL 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN+ V E WRA++ P R L D + L + + +VL A+ G Sbjct: 168 AGLGNLLVDEICWRARIRPTRAVADLDD------DEVKALHRAMTQVLRTAVRHG----- 216 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G + A +P CG + GR+T +C CQ Sbjct: 217 ---RVPGLPRWLTGA----RDAPDPHCPRCGGRLDHARVGGRTTLWCPRCQ 260 >gi|239982676|ref|ZP_04705200.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|239982678|ref|ZP_04705202.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291454525|ref|ZP_06593915.1| DNA glycosylase [Streptomyces albus J1074] gi|291454527|ref|ZP_06593917.1| DNA glycosylase [Streptomyces albus J1074] gi|291357474|gb|EFE84376.1| DNA glycosylase [Streptomyces albus J1074] gi|291357476|gb|EFE84378.1| DNA glycosylase [Streptomyces albus J1074] Length = 264 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 112/294 (38%), Gaps = 41/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P + G+ +++V R K+L Sbjct: 1 MPEGDTVHQAAGRLHQALAGQELTVSDLR-------VPRLATVDLTGRTVVEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG L++ HL M GS+ I + P H + T + YR+ Sbjct: 54 LTRLEGGLTLHSHLRMDGSWRIF-APGERWRGGPGHQIRAVLGTASRTAVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 ++L+ T+ + + + LGP+ ++ A L + A+L+Q+ +AG Sbjct: 107 --PVLELLRTTAEDE--AVGHLGPDLLGPDWSPAEALARLAAAPEREVGEAVLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN++ E + +++P L + +L++ + Sbjct: 163 IGNVFKSELCFLLRVTPWLPVGELPDPERLTT-LAARLLKANRHRPRRT----------- 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 + G VYG+ G PCL CG +R Q R T++C CQK Sbjct: 211 -----TTGRPDRPLYVYGRAGRPCL-RCGATVRTAQQGDPTRERPTYWCPGCQK 258 >gi|120402637|ref|YP_952466.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119955455|gb|ABM12460.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 250 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 106/290 (36%), Gaps = 41/290 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLREALEGRELTRCDVR-------VPRYAAVDLSGQTVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M G+++I + I L T + R D Sbjct: 54 FIRV-GQASIHSHLKMDGAWVIGRVRVPSY-------KIRIVLE----TARSRASGVD-- 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G +++++ + + + LGP+ ++A + + ALL+Q+++AG Sbjct: 100 -LGVLEILDRATDME--AVAHLGPDLLGPDWSAPLAAANLVADPSRPVAEALLDQRVMAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + L P L + Q + ++ + ++ Sbjct: 157 VGNVYANELCFVFGLRPGTAVGELADPVRVAS-------RAQQMLWLNRLRVNRTTT--- 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G PC CG I R T++C CQ+ Sbjct: 207 -----GNTRPGQDVWVYGRAGLPC-RRCGTPIETDKGGDRVTYWCPTCQR 250 >gi|301300337|ref|ZP_07206542.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852073|gb|EFK79752.1| putative formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 148 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 9/157 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE +RR L ++ N + DI + + F K I + RR KYL Sbjct: 1 MPELPEVETVRRGLEKLVLNKKIKDIRVLYSKTIINEETEFIEKLTNKTIKKIDRRGKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++I HL M G + +E ++ + +H HV T+ T+ + YND R Sbjct: 61 LFRFSSDLTMISHLRMEGKYFVEPST----KEVEKHTHVVFDFTDGTSLR-----YNDVR 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +FG M LV+T ++ Q L LGPEP + +F Sbjct: 112 KFGRMQLVKTGVEMQTAGLAKLGPEPKEETFIVEDFF 148 >gi|284047240|ref|YP_003397580.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] gi|283951461|gb|ADB54205.1| DNA-(apurinic or apyrimidinic site) lyase [Conexibacter woesei DSM 14684] Length = 260 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 37/293 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + +++ +I R R + G+++ V K+L Sbjct: 1 MPEGDTILRAANRIRPILEGAVPDEI---RMPQRRHAADRWPQRLAGRRVRSVDPYGKHL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + EG+L++ HL M+G++ + + V + + V+ D Sbjct: 58 FLRFEGDLTLHSHLRMTGAWAVYPDGARWRRAPRRAWLVLRA-------RGSEVVEFDG- 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK--KNSNLKNALLNQKIVA 178 ++L+ S LR LGP+ + F+ + + +ALL+Q+IVA Sbjct: 110 --PVLELMTESRTRFDQQLRALGPDLLADDFDPARFLRRLRADDPTRGIGDALLDQRIVA 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIGNI+ E W A++ P R R + +++ + ++ A A + D Sbjct: 168 GIGNIWKAEGCWGAQIDPWRPLRDVTDAEAV------AIVENARPRMLAAAAAPRGAGGD 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 H VY + G PC CG +I Q R+T++C CQ+ Sbjct: 222 DRH-------------VYRRGGMPC-PRCGTVIASRGQGDDNRTTWWCPGCQR 260 >gi|311743069|ref|ZP_07716877.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] gi|311313749|gb|EFQ83658.1| DNA-formamidopyrimidine glycosylase [Aeromicrobium marinum DSM 15272] Length = 269 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 23/281 (8%) Query: 11 RRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG-NLS 69 +L V RF + G+ + K+L + +E Sbjct: 2 AHDLSEAFAGRRVRS---TSPQGRFA-----AGRLDGRVLAGAEAWGKHLFVSVEQVPWQ 53 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + VHLG+ G+F I + P V LT + + + D R +L+ Sbjct: 54 VHVHLGLYGTFRISRGG-----RLPVVGQVRWRLT--ASARSGAPVTADLRGPTACELLM 106 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 L LGP+P +A H+ + + + LL+QK+++G+GN+Y E L Sbjct: 107 PDEVDAV--LARLGPDPLRADADADAAWHRVSRSGTPVAVLLLDQKVLSGVGNVYRAEVL 164 Query: 190 WRAKLSPIRKTRSL--IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 +R + P+ R L + + D+++ + +++ ID + + Sbjct: 165 FRHGIDPMTPGRDLDRSRWDAVWDDLVHLMAIGVRRGRIDTVRPEHEP--GPMGRSARAD 222 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G CL CG I V AGR+ F+C CQ Sbjct: 223 AHGGEVYVYRRDGRACL-VCGTTICSTVLAGRNLFWCPGCQ 262 >gi|300859464|ref|YP_003784447.1| formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|300686918|gb|ADK29840.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis FRC41] gi|302207145|gb|ADL11487.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis C231] Length = 273 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 25/288 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + K+ + RF A K+L IE Sbjct: 5 MPEGHVIHRLARELNKHFQGKAPRVTSPQGRFAAEAALIHA---APFYQAHAWGKHLFIE 61 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HLG+ GS + AK + + + + R Sbjct: 62 FDAPTPERIVHIHLGLIGSLHFDPIEEAK-------GQIRLRIEGDKVAANL-------R 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ T + LG +P + + + + ++ + L++Q++ AG+ Sbjct: 108 GPQWCRLITTEEMEV--AVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGV 165 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNIY E+L+R +SP R + +D++Y + + ++ ID + + + Sbjct: 166 GNIYRAESLFRLGISPFTPGREVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTP--QAM 223 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G+PC CG I V GR+ F+C CQ Sbjct: 224 GRAPRKDDHGGEVYVYRRLGQPCY-VCGTPISGQVMEGRNLFWCPTCQ 270 >gi|171915668|ref|ZP_02931138.1| formamidopyrimidine-DNA glycosylase [Verrucomicrobium spinosum DSM 4136] Length = 266 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 70/292 (23%), Positives = 115/292 (39%), Gaps = 31/292 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58 MPEL EV + K V+ + LH K+ F G + ++ K Sbjct: 1 MPELAEVYYYAKQWA-AGKGKPVSRVELHAKSRVFRGCDTGELEEGLNGAALKEILTHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L + + VHLGM+G + +P + +H+H+ + L + +I+ D Sbjct: 60 QMLFKFSRGQWLAVHLGMTGETRV----APQPYEAAKHDHLVLHLRDR------ALIFTD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 PR+FG + + + ++ + L PE ++F LT + LK LL+Q+ Sbjct: 110 PRQFGLVQYHQGNALPEF--WQALPPEIGSDAFTTALLTGVLQRHARVPLKMLLLDQRYF 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN E +W+ KL P + SL T L + ++KV A+D G Sbjct: 168 PGVGNWMADEIMWQMKLPPATPSGSLTGKQVT------ALHRTVKKVCKGAMDTVGVDWS 221 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D Q+ Y C + R GR+ +C CQK Sbjct: 222 DPP---------QDWLFRYRWEDGHVCPRCQAELVRESLRGRTACWCPVCQK 264 >gi|239931280|ref|ZP_04688233.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291439653|ref|ZP_06579043.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] gi|291342548|gb|EFE69504.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces ghanaensis ATCC 14672] Length = 278 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 102/299 (34%), Gaps = 37/299 (12%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRRAKY 59 +PE I R HR LR P + + K+ Sbjct: 1 MPEGHTIHRLAEDY------AAAFAHRAPLRVTSPQGKFADAATLLDRTPLHTTDAHGKH 54 Query: 60 LLIELEGNL--------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 L + + +HLG+ G P + V + L +T+ Sbjct: 55 LFLGFGDPDPEHPEHTEWVHIHLGLFGKVTFGPAPAPPPT-----DTVRLRLAGDTS--- 106 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 Y D R L+ + K LGP+P + + + + + L Sbjct: 107 ----YADLRGPTTCALITDAEKQAIHD--RLGPDPLRPDADPAAAYRRIGRSRTTIAALL 160 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI 229 ++QK++AG+GN+Y E L+R ++ P R R + D++ + + ++ ID + Sbjct: 161 MDQKVIAGVGNVYRAEVLFRHRIDPYRAGRDITPAEWDAIWSDLVVLMREGVRTNRIDTV 220 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + + VY + PC CG IR A + F+C CQ Sbjct: 221 RPEHTP--EAMGRPPRVDDHGGEVYVYRRAPLPC-HVCGGEIRTADLAACNLFWCPTCQ 276 >gi|116670953|ref|YP_831886.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116611062|gb|ABK03786.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 305 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 105/318 (33%), Gaps = 44/318 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + + RF +A + ++ K++ Sbjct: 1 MPEGHSVHRLARQFADVFAGQRLA---VSSPQGRF---ADGAALLDARTLLGTVAHGKHM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS---CAKPIKNPQHNHVTISLTNNTNTKKYRVI-- 115 + + L++ VHLG+ G++ + A I P+ + Sbjct: 55 FLHFDNGLALHVHLGLYGAWDFGGDATFRGASSIGAPRKVGEREVFDDGATDPAAGGGPG 114 Query: 116 --------------------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAI 154 + D R + + L LGP+P N + Sbjct: 115 YTGPPAPVGAVRVRLAGAHGWADLRGATTCHAITEAEADAV--LARLGPDPLRNLPGDKD 172 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 + + L L++QK++AG+GN+Y E L+R L P RSL Sbjct: 173 GFVAGLRARKTPLAALLMDQKVIAGVGNVYRAELLFRQGLDPWLPGRSLDAEAAGG---- 228 Query: 215 YKLIQEIQKVLIDAIDAGG---SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 L ++ ++ D + G + R + + + VY + G C CG + Sbjct: 229 --LWEDTVAMMSDGVRDGRIITTPPRYWTEPAAGLPAPGESHFVYRRHGLDC-RICGSPV 285 Query: 272 RRIVQAGRSTFYCTYCQK 289 R ++C CQ+ Sbjct: 286 ALTDLGARKLYWCPVCQQ 303 >gi|322434589|ref|YP_004216801.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] gi|321162316|gb|ADW68021.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidobacterium sp. MP5ACTX9] Length = 267 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 112/294 (38%), Gaps = 35/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E+ V + + RF G+ ++ V+ K+L Sbjct: 1 MPEGNELHRWANLHNEVFAGKK---VRVDSPQGRFTDAP----LLDGRTLVKVTAVGKHL 53 Query: 61 LIELEG----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + VH+G+ G F H +P + L T T + Sbjct: 54 GYDFGKIEGEQRILHVHMGLYGDFSEGHPPMPEP-------RGALRLRIWTKTDWLEL-- 104 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 R L + + L LGP+P ++ L + + +++ L++Q I Sbjct: 105 ---RGPTDCSLW--NAEKWQTLLDRLGPDPLNHDKPGPML-ERIATRKTDIGQLLMDQSI 158 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GNIY E L+RA+LSP + + Q KD + + + I A Sbjct: 159 LAGVGNIYRAELLFRARLSPFKPGNEVPQKTLEAIYKDAVKLMPDAMVDRRIVTTKA--- 215 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +D H G + A VY +TG PC CG I+ + A R+ F+C CQ Sbjct: 216 --KDRPHKTGEA-LNEEAHYVYRRTGRPCF-ICGTAIKTKIVASRNLFWCPTCQ 265 >gi|323356901|ref|YP_004223297.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273272|dbj|BAJ73417.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 277 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 104/294 (35%), Gaps = 38/294 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +R+ L V + L + + G++I+ K+L Sbjct: 1 MPEGDSVYRLRQRLDAATTGHRVREGELRSGS-------AAGTSLAGRRIVGYDTHGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++ HL M GS+ I A P + V + L + + Sbjct: 54 LTRFDDGTTLHTHLRMQGSWAITRAGRALPTPVREKARVRLRLDDGREVWGLDL------ 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 ++LV T + + LGP+P ++A + + ALL+Q +AG Sbjct: 108 --PVVELVPTPRERDV--IGHLGPDPLREDWDAADAVRRLSSRPERAFVAALLDQTRIAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++V E + + P + + + + R Y Sbjct: 164 LGNLWVNELAFLRGIHPFAPIGTTDLDALAAL-------------AARCLRISATVPRMY 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQAG----RSTFYCTYCQ 288 G ++ V G+ G PCL CG I R AG R T++C CQ Sbjct: 211 QVTTG-DRRRGSSHWVAGRAGRPCL-RCGTRILVREEVAGDPEQRRTWWCPLCQ 262 >gi|294812630|ref|ZP_06771273.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|294325229|gb|EFG06872.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 22/287 (7%) Query: 5 PEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL 64 PE I R + + +F +A G+ + D K+L + Sbjct: 60 PEGHTIHRLAEDHRARFLDRPVRVSSPQGKF---SDAAALLDGQPLTDAEAHGKHLFLGF 116 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + +HLG+ G P + V + LT D R Sbjct: 117 GALGWVHIHLGLFGKVDFGDAPAPPPT-----DTVRLRLTTPKAHV-------DLRGPTT 164 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 L+ K LGP+P + + + + + + LL+QKI+AG+GN+Y Sbjct: 165 CALITDGEKTAVH--ERLGPDPLRPDDDPDRVWARLSRSRTTVAALLLDQKIIAGVGNVY 222 Query: 185 VCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 E L+R + P R R + + D++ + + ++ ID + + + + Sbjct: 223 RAEVLFRLGIDPYRAGRDITRAEWDAIWADLVELMREGVRNNRIDTVRP--EHMPEAMGR 280 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + PC CG +R A R+ F+C CQ+ Sbjct: 281 PPRVDDHGGEVYVYRRDRRPC-HVCGTEVRTAGLAARNLFWCPACQR 326 >gi|88855146|ref|ZP_01129811.1| DNA glycosylase [marine actinobacterium PHSC20C1] gi|88815674|gb|EAR25531.1| DNA glycosylase [marine actinobacterium PHSC20C1] Length = 332 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 117/337 (34%), Gaps = 64/337 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + + + RF G +++ K + Sbjct: 1 MPEGHSVHRIARQFALHFVGK---HVAVSSPQGRFAAGAE---RIDGLRMLSAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFII----------------------------EHTSCAKPIK 92 +E E + + VHLG+ G++ EH I Sbjct: 55 FLEFEHDRWLRVHLGLYGAWDFAGNFTADATTASAAGRMGQTNQHGTVVGEHEDSLASIG 114 Query: 93 NPQHNHVTI--------SLTNNTNTKKYRVIY--------NDPRRFGFMDLVETSLKYQY 136 P+ + + L++ V D R +++ Sbjct: 115 APRRTRLRMSEQEKASDELSDFPPEPIGAVRVRLLTENTCADLRGPTACEVLTPDEVQ-- 172 Query: 137 PPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 L LGP+P +N KK + + L++Q +V+GIGN+Y E L+RA+L Sbjct: 173 IALNKLGPDPLVDENGEAEERFVATVRKKQTAIGLQLMDQSVVSGIGNVYRAEILFRARL 232 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQN 251 P + + + ++L +L ++ ++L + G + + D ++ + Sbjct: 233 DPHTPGKLIAE------ELLRELWRDWARLLEIGVTTGQMMTMEGLTSDEYTAALANRAD 286 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + G PC CG I + A R ++C CQ Sbjct: 287 RHWVYHREGLPC-RVCGTNIVMELAASRKLYWCPNCQ 322 >gi|323173228|gb|EFZ58857.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] gi|332997294|gb|EGK16910.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 157 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 80/167 (47%), Gaps = 13/167 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 RFG + T + L LGPEP + FN YL + KK L Sbjct: 110 RFGA--WLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKRRL 154 >gi|324997986|ref|ZP_08119098.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia sp. P1] Length = 286 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 33/294 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEVE R L T+TD+ R P ++A +G ++ R K Sbjct: 19 MPELPEVENARAVLAQA-TGRTITDVDDRDDWVCRPHRPGDIASALKGGRLTAAHRIGKT 77 Query: 60 LLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + + + ++ VHLGM G ++ ++ + P ++ V Sbjct: 78 MWCDTETSDGDAGPALGVHLGMGGRIVVTNSGGERIGGGPARPDRQARKREWD---RFTV 134 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 ++D +F D P L LGP+ + + S +K LL+Q Sbjct: 135 TFDDGGQFRLFDKRRLGRVRLDPDLSGLGPDA--EGLRPAVFRERLLRGRSAVKARLLDQ 192 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AG+GN+ E LW+A+++P R L + + L +L + + + L AI GG Sbjct: 193 SVLAGVGNLLADETLWQARIAPATPVRDLTRTD------LDRLHRNLDRALERAIANGGV 246 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + G C CG + GRST++C Q Sbjct: 247 HTGEVIE--------------HRHPGGHC-PRCGAEMVHGTVGGRSTWWCPQEQ 285 >gi|321264442|ref|XP_003196938.1| hypothetical protein CGB_L0290C [Cryptococcus gattii WM276] gi|317463416|gb|ADV25151.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 478 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 19/234 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + + F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDRIIFTGGTDHNEFAKEISGRTITGCERKG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K I L G ++H GM+G ++ + + P+ + L Sbjct: 61 KMFWITLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESVDVWPPRFYKFVLRLEPQK 120 Query: 108 NT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D RR G + LV + YPP+ LG +P + T K Sbjct: 121 GSIGDEPRELAFIDGRRLGRLRLV-SDPVSSYPPVSELGFDPVLSHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 +K +++Q AG+GN E L++A++ P +L + N KD+ ++L Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQN--IKDLHHQLR 231 >gi|116622565|ref|YP_824721.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] gi|116225727|gb|ABJ84436.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Solibacter usitatus Ellin6076] Length = 291 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 109/288 (37%), Gaps = 32/288 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V + L + T+T + L L A G+++IDV R K + Sbjct: 1 MPELPDVVVYVEALCARIAGHTLTRVTLRGPFLLRTVTPPI-DALYGQRVIDVRRAGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I E L +++HL ++G N T + + Sbjct: 60 AIGFENGLWLVIHLMIAGRLHWNGKRQPVA---------AFEFDNGT----LTLTEAGTQ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + +++ + + G E D T +N LK +L + ++ +GI Sbjct: 107 HRAQIHVLDAAPETA-------GLEVLD--ATLAEFTAALRAENHTLKRSLTDPRLFSGI 157 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSPI T L + T +L ++ L + D Sbjct: 158 GNAYSDEILHRARLSPIAMTFKLTEEEIT------RLYGATREELELWVKRLREESGD-- 209 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ + +GK G PC CG I+RI A T YC CQ Sbjct: 210 KFPEKVTAFREEMAAHGKYGNPC-PRCGGKIQRIRYAANETNYCPACQ 256 >gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] Length = 264 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 33/293 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLH--RKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EVE R+ ++ +T + LH ++ R +A +G RAK Sbjct: 1 MPELAEVEYYRKEWDAGLR-KKITAVELHAGKRIFRGVDTKRLAATLKGAAYTGSEARAK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + G + + VHLGMSG +E AK + +H+H+ + ++++D Sbjct: 60 LMCFRFSGGVWLGVHLGMSGELRVE----AKDFEPGRHDHLVLR------QSARSLVFSD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIV 177 PR+FG + E + ++ L P F ++ ++ +K ALL Q Sbjct: 110 PRQFGRVHFHEGRAEPEW--WAKLPPAVTSPEFTLERMSAFLKRRARLAVKAALLVQTAF 167 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN E LW+A++ P L + + + ++ +++ ++D G Sbjct: 168 PGVGNWMADEILWQARIDPRALCGKLSRKQ------IAAIWEKAREICQVSLDTIGKDYS 221 Query: 238 DYVHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D + ++ + T + G ++ GR+T +C CQ+ Sbjct: 222 DP----------PEDWLIHQRWTNKGLCPRDGLQLKTATIGGRTTRWCARCQR 264 >gi|145296990|ref|YP_001139811.1| hypothetical protein cgR_2889 [Corynebacterium glutamicum R] gi|140846910|dbj|BAF55909.1| hypothetical protein [Corynebacterium glutamicum R] Length = 269 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 39/297 (13%) Query: 4 LPEVEIIRRNLMMVMK--NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 +PE +I R + K TV D RF +A G +I K+L Sbjct: 1 MPEGHVIHRLAGELTKHFGETVLDAT--SPQGRFASE---AAIINGHRIAVAEAYGKHLF 55 Query: 62 IELEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +E + + + +HLG+ G+ E + + + L++ Sbjct: 56 VEFDADHPEHILYIHLGLIGTLQFEPAEETR-------GQIRLHLSDGEIAANL------ 102 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 R + L+ + + Q + LG +P + + + + + ++ + L++QK+ A Sbjct: 103 -RGPQWCRLITDAERTQ--AIGKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFA 159 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNIY E L+R +SP + + + ++ ++ D + AG Sbjct: 160 GVGNIYRAETLFRLGISPFTIGKDITTAQFRS------IWADLVGLMKDGVVAGRIDTVR 213 Query: 239 YVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 H ++G Y +TG+ C C I+ V GR+ F+C CQ+ Sbjct: 214 PEHTPEAMGRPPRKDDHGGEVYTYRRTGQECFL-CETPIKEQVMEGRNLFWCPGCQR 269 >gi|325001208|ref|ZP_08122320.1| formamidopyrimidine-DNA glycosylase [Pseudonocardia sp. P1] Length = 278 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 30/291 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + ++ + RF G+ + V K+L Sbjct: 1 MPEGHTVHRLARLQRRRYAGREVAVSSPQGRFTTGADV---VDGRVLETVEAHGKHLFQH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G F + + + P V + + T+ Y D R Sbjct: 58 YGPDTVVHVHLGLWGRF-----ANRRLPEAPPRGQVRMRIVGGTH-------YADLRGPA 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L++ LG +P + + + H+F + + L L++Q ++AG+GN+ Sbjct: 106 ACELLDDVAVKA--LHDRLGEDPLRDDADPDRVRHRFARSRAPLAALLMDQSVIAGVGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + E L+R L P+ R L D L ++ +L + G H Sbjct: 164 FRAETLFRTGLDPLTPARDLDD------DSFGLLWDDLSAMLREGERRGRIETLLPEHDP 217 Query: 244 GSIGYFQNA------FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + Y +TG PCL CG I R+ F+C CQ Sbjct: 218 ALLEPADRGAVCASVVYAYRRTGRPCL-VCGTPIAHREFRARNLFWCPRCQ 267 >gi|285808428|gb|ADC35954.1| putative fapy-DNA glycosylase [uncultured bacterium 98] Length = 299 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + L + + + L L +A G+++ID+ R K + Sbjct: 1 MPELPDILLYLHALRPRIVGQHIEAVRLASPFLLRSIDPPLNA-LEGRRVIDLHRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I LEG L I+ HL ++G F + P K L + + + Sbjct: 60 VIALEGELFIVFHLMIAGRFRWKPKGTRIPGKVG-------LLAIDFPAGSLLLTEAGSK 112 Query: 121 RFGFMDLVET-SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + LV + + P G E S +N LK AL + + +G Sbjct: 113 RQASLHLVAGRAALAAHDPG---GLEVLGASV--EEFVGALTAENHTLKRALTDPHLFSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L A LSP + TRSL + G KL + + +L I+ S + Sbjct: 168 IGNAYSDEILHAAGLSPFKLTRSLTGDEG------RKLYEATRGMLETWIERLQSEAGE- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F++ +V+GK G+PC CG ++R+ A YC CQ Sbjct: 221 -EFPEKVTAFRSEMAVHGKYGKPC-PECGTPVQRVRYAANEANYCPSCQ 267 >gi|296138322|ref|YP_003645565.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] gi|296026456|gb|ADG77226.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Tsukamurella paurometabola DSM 20162] Length = 261 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V+ +T L P + + G+ + DVS R K+L Sbjct: 1 MPEGDTLHNLAARLRPVLAGRVLTGCDLR-------VPRYATVDLTGRTVDDVSARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L++ HL M G + + + + P H + + + + + + Sbjct: 54 LIA-AGDLTLHSHLKMEGQWHVYRPG--ERWRRPGHTARAVLAVDGAQVVGFSLGFLEVL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R +D L LGP+P ++ + ALL+Q+ +AG Sbjct: 111 RTAAVD----------DALAHLGPDPLGPQWDPERAAENLAATPARPVGLALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P + + G D +L++ G S+R Sbjct: 161 IGNVYRNELCFVRGVHPAMEVAACGDLRG-WVDDAARLLRANA----------GRSVRVT 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 +D VY + PCL CG I R+ ++C CQ Sbjct: 210 TGVD----RNGLRAFVYDRARRPCL-RCGTAISAGSLGADGEAERTIWWCPRCQ 258 >gi|256392598|ref|YP_003114162.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] gi|256358824|gb|ACU72321.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Catenulispora acidiphila DSM 44928] Length = 262 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 106/293 (36%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + L P ++ G++++ R K+L Sbjct: 1 MPEGDSVFRTAAQLHEALAGDVLAVSDLR-------VPSLATSDLTGRRVLQTVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L LEG+L++ HL M G + + T + + L NT Sbjct: 54 LTRLEGDLTLHTHLRMEGRWAVYRTG--ERWTGGPGWQIRAVLGTARNTAV-------GY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 R +DL+ TS + + LGP+ ++A + L ALL+Q+ +AG Sbjct: 105 RLQVVDLLPTSEE--PTIVGHLGPDLLGPDWDAEEALRRLSADPARPLGLALLDQRNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + A++ P R + L K++ ++L G Sbjct: 163 VGNVYANELSFLARVPPWRPVGEV--------PGLEKVVDTAHRLLTLNRLRTG------ 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 H+ VYG+ +PC CG I R ++C CQ Sbjct: 209 -HVTTGETRADRRNWVYGRARQPC-RRCGTRILTSSLGTPPKDRVIYFCPNCQ 259 >gi|317126732|ref|YP_004100844.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] gi|315590820|gb|ADU50117.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Intrasporangium calvum DSM 43043] Length = 289 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 38/306 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L + I + RF +A G+++ S R K+L Sbjct: 1 MPEGHTIHALAARLNRTLGG---EAISVSSPQGRFASD---AAVIDGRRLDQASARGKHL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + +L++ VHLG+ G+F ++ P P + L + R Sbjct: 55 FLDFD-DLTLHVHLGLIGTFHVKPRDPLGPAGTPA----RLQLEGRRYVAEL-------R 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA---DNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 LV+ + L LGP+P D + + + L++Q +V Sbjct: 103 GPMICALVDEPTRAAV--LAKLGPDPLHAPDVPSGSERGWERISMSRKTIAELLMDQAVV 160 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKL-----------IQEIQKV 224 AG+GN+Y CE L+R ++ P + R L + + +D++ L +Q+ Sbjct: 161 AGVGNVYRCEVLFRHRIDPFTRGRDLGRRLWDDVWEDLVTLLPLGMAFSQILTMQDQVAA 220 Query: 225 LIDAIDAGGS-SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 + + G S ++ + + + +F F Y +TGE C CG+ IR + GR+ ++ Sbjct: 221 AAEMVADGSSLAITETLSGERLGDHFDRRFHTYKRTGEACD-RCGRRIRAELIGGRTLYW 279 Query: 284 CTYCQK 289 C CQ+ Sbjct: 280 CPGCQR 285 >gi|315655723|ref|ZP_07908621.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] gi|315489787|gb|EFU79414.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii ATCC 51333] Length = 342 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 104/348 (29%), Gaps = 68/348 (19%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + M+ + RF +A G+++ DV K+L + Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAASSPQGRF---AAGAAVLNGQRLTDVQAYGKHLFLG 57 Query: 64 L---------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNP-------------- 94 + +HLG+ GS+ S Sbjct: 58 FTPRQVETAQTTPDSKSSLTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQTAE 117 Query: 95 ----------------QHNHVTISLTNNTNTKKYRVIY-------------NDPRRFGFM 125 H H Y D Sbjct: 118 ILEIPVHTHHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGPNTC 177 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 +L++ LGP+P + + + + AL++Q ++AG+GNIY Sbjct: 178 ELLDAEGVASV--FARLGPDPLRPDCDCGEFVKRCATRQKGIGEALMDQSVIAGVGNIYR 235 Query: 186 CEALWRAKLSPIRKTRSLI----QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 E L+ A+L+P R + + + L E ++ D + + + Sbjct: 236 AEVLYAARLNPFTPAREVSMRKLRRIWDWLEEYLPLGVESGRITTANPDDYAAFVERELA 295 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + PCL C ++ + GR ++C CQ+ Sbjct: 296 AGREPQAIDSRYYVYQRQDRPCL-RCSTTVKLQIAGGRKLYWCPRCQR 342 >gi|320108191|ref|YP_004183781.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] gi|319926712|gb|ADV83787.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Terriglobus saanensis SP1PR4] Length = 305 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 112/313 (35%), Gaps = 44/313 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH----HFSAATRGKKIIDVSRR 56 MPE E I R + K +R D P +A +K+ V Sbjct: 1 MPEGNE---IHRWAERH-------NAAFAGKKIRVDAPEGSRFQDAALVDNRKLEKVIAV 50 Query: 57 AKYLLIELEGNLSIIVHLGMSG----------------SFIIEHTSCAKPIKNPQHNHVT 100 K+L + + + +HLGM G + K P + Sbjct: 51 GKHLGYDFGKDRILHIHLGMYGDFSEGTGPLPPEKGALRVRLYDAQAIKGPVEPGESKRH 110 Query: 101 ISLTNNTNT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +N+ T + +V + + R + LGP+P + A Sbjct: 111 AWYSNDDGTGHIEAAKVAWVELRGPTDCSVFSQQQWEALE--ARLGPDPLNGDP-ATKFV 167 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILY 215 + + + + L++Q I AG+GNIY E L+RAKL P ++ + KD + Sbjct: 168 EKVRARKTAVAALLMDQTIAAGVGNIYRAELLFRAKLDPFTPGNAVSEKTLEAIWKDAIP 227 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + + I + +D + + A VY + G+PCL CG I V Sbjct: 228 LMKAGMVDRRIIT-----TKPKDRPTKKTGLPLKEEAHYVYRRQGKPCL-ICGTKILTQV 281 Query: 276 QAGRSTFYCTYCQ 288 AGR+ F+C CQ Sbjct: 282 MAGRNLFWCPNCQ 294 >gi|118472403|ref|YP_886128.1| endonuclease VIII and DNA n-glycosylase with an AP lyase activity [Mycobacterium smegmatis str. MC2 155] gi|118173690|gb|ABK74586.1| endonuclease VIII and dna n-glycosylase with an ap lyase activity [Mycobacterium smegmatis str. MC2 155] Length = 252 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 110/289 (38%), Gaps = 41/289 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ T+T + P + + G + +V R K+L Sbjct: 1 MPEGDTVFHTAAALRAALEGKTLTRCDVR-------VPRYATVDLSGAVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G+ SI HL M G++ I HT A + I L T R I D Sbjct: 54 FIR-AGSASIHSHLKMEGAWRIGHTKVAPH-------RIRIVLE----TADTRAIGID-- 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 G +++++ + LGP+ + + L ALL+Q+++AG Sbjct: 100 -LGILEVLDRGTDMD--AVAYLGPDLLGPDWEPRVAADNLAADPDRPLAQALLDQRVMAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + P +L KD L + + + ++ ++ D Sbjct: 157 VGNVYCNELCFVFGRLPTAPVGTL-------KDPLRVVQRARDMLWLNRSRWNRTTTGDT 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VYG+ GEPC CG +I+ R T++C CQ Sbjct: 210 RN--------GRQLWVYGRAGEPC-RRCGTLIQTDRGGERVTYWCPVCQ 249 >gi|262201979|ref|YP_003273187.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] gi|262085326|gb|ACY21294.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia bronchialis DSM 43247] Length = 267 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 101/290 (34%), Gaps = 29/290 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + + ++ RF +AA G K+L+ Sbjct: 1 MPEGHTLHRLARRHTRLLGGRRVTVNSPQGRF---ADGAAAVDGMTFGRADAWGKHLVHR 57 Query: 64 LEGNLS---IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I +HLG+ G+F P+ V + + ++ D R Sbjct: 58 YRDGRREQLIHIHLGLYGAFTEAPVPMDDPV-----GQVRLRIESDEIGI-------DLR 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +L + + LGP+P + + L++QK+VAG+ Sbjct: 106 GPTACELYGPADLEA--LVARLGPDPLRRDAKPVDAWTAIRSSRRPIGALLMDQKVVAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+RA + P+R + + L ++ ++ + G + Sbjct: 164 GNVYRAEVLFRAGIDPMRPGTIITRAEFDG------LWADLVDLMRIGVRRGRIHVMRPD 217 Query: 241 HIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Y + VY + GE C CG + R ++C CQ Sbjct: 218 DDHGAPSYAPDRPRTYVYRRAGEAC-RICGTPVLIAELEARKLYWCPVCQ 266 >gi|31789466|gb|AAP58579.1| putative fapy-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 110/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + L + V I L L ++ G+ I + R K + Sbjct: 1 MPELPDILLYIHALGPRVIGRRVQRIRLVSPFLLRSVAPPLAS-VEGRTITALHRLGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + E EG L ++ HL ++G F + P K L + + + Sbjct: 60 VFEAEGELFLVFHLMIAGRFRWKPAGAPVPGKVG-------LLAIDFEHGSLILTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + +V S P G E + ++N +K AL + + +GI Sbjct: 113 RQASLYVV--SGADALDPHNPGGLEVMEAPL--AVFASALRRENHTVKRALTDPHLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L AK+SP R+T SL + +L + L D D Sbjct: 169 GNAYSDEILHAAKMSPFRQTSSLTDEE------IARLFHATRHTLALWTDRLREETADRF 222 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ G+PC CG ++RIV A YC CQ Sbjct: 223 --PEKVTAFREGMAVHGRYGKPC-PVCGTPVQRIVYAANEANYCVQCQ 267 >gi|298345303|ref|YP_003717990.1| putative DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] gi|298235364|gb|ADI66496.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus curtisii ATCC 43063] Length = 342 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 120/354 (33%), Gaps = 80/354 (22%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + M+ + RF +A G+++ DV K+L + Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAASSPQGRFTAG---AAVLNGQRLTDVQAYGKHLFLG 57 Query: 64 L---------------EGNLSIIVHLGMSGSFIIEHTS-------------------CAK 89 + +HLG+ GS+ S A+ Sbjct: 58 FAPRQVDTAQTTPDSKSPPTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQTAE 117 Query: 90 PIKNPQHNH-------VTISLTNNT-------------NTKKYRVIY----NDPRRFGFM 125 ++ P H H + T + R++ D Sbjct: 118 IVEIPVHTHHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGPNTC 177 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 +L++ LGP+P + + + + AL++Q ++AG+GNIY Sbjct: 178 ELLDVEGVAAV--FARLGPDPLRPDCDFSEFVKRCATRQKGIGEALMDQSVIAGVGNIYR 235 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD------Y 239 E L+ A+L+P R + L ++ +++ L +++G + + Sbjct: 236 AEVLYAARLNPFTPAREVTSR------KLRRIWDWLKEYLPLGVESGRITTASPDDYAVF 289 Query: 240 VHIDGSIGYFQN----AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V + + G + VY + PCL C ++ + GR ++C CQ+ Sbjct: 290 VERELAAGREPQAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|172041310|ref|YP_001801024.1| hypothetical protein cur_1630 [Corynebacterium urealyticum DSM 7109] gi|171852614|emb|CAQ05590.1| hypothetical protein cu1630 [Corynebacterium urealyticum DSM 7109] Length = 300 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 28/305 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF + A G + K+L + Sbjct: 1 MPEGHVIHRLAAQLNQLFAGHALRVSSPQGRF---AEEAGALTGDMLDRAEAWGKHLFLS 57 Query: 64 LEG--------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-HNHVTISLTNNTNTKKYRV 114 + I +HLG+ G+ IE + ++P + H H + Sbjct: 58 FGNPRNPHRRADHIIHIHLGLIGTLAIEPFTGSQPRGQVRLHLHRIDAEGGEDMCTWGNA 117 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA---DNSFNAI------YLTHQFHKKNS 165 + + R + L+ + LG +P D + L + Sbjct: 118 VEANLRGPQWCRLITDEEMDA--AVAKLGADPLRSTDPVVDPENAAKLPELDQFLCRSRR 175 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI--QNNGTPKDILYKLIQEIQK 223 ++ + L++Q AG+GNIY E L+R + P + L + +D++ + + Sbjct: 176 SIGSILMDQARYAGVGNIYRAETLFRLGIHPDVRACDLAAEERESIWQDLVELMAEGEAS 235 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 ID + + + + VY + G+PC CG+ IR V GR+ F+ Sbjct: 236 GRIDTVRPEHTP--EAMGRAPRKDDHGGEVYVYRRAGQPCY-VCGEEIRHRVVEGRNLFW 292 Query: 284 CTYCQ 288 C CQ Sbjct: 293 CPGCQ 297 >gi|262183005|ref|ZP_06042426.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium aurimucosum ATCC 700975] Length = 271 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 106/290 (36%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R + + + + RF A + K+L + Sbjct: 1 MPEGHVIHRLARTLNADFRNKPLAVSSPQGRFATEAALVDA---SPLSLAEAFGKHLFVH 57 Query: 64 LEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + I +HLG+ GS E ++ + + + N T R Sbjct: 58 FDTDNPRHVIYIHLGLIGSLRFEPSADV-------WGQIRLRIDNGTTAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F L+ + + +G +P + L + H ++ L++Q + AG+ Sbjct: 104 GPQFCTLIT--EEEYQAKVAKVGQDPLRKDADPDTLWDRVHASRRSIGAMLMDQGLFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY EAL+R +LSP L + D++ + ++ ID + + + Sbjct: 162 GNIYRAEALFRQELSPFIPGNQLDRAEFDAIWSDLVDLMDYGVEHGRIDTVRPAHTP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC C IR V GR+ F+C CQ Sbjct: 220 AMGREPRKDDHGGEVYVYRRAGLPCHVCC-TEIREQVMQGRNLFWCPTCQ 268 >gi|94968014|ref|YP_590062.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] gi|94550064|gb|ABF39988.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Candidatus Koribacter versatilis Ellin345] Length = 299 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ L + T+ + + L A K+++ + R K + Sbjct: 1 MPELPDITAYLTALEPRVLGKTLQRVRITSPFLLRTIDPPL-EAVERKRVLALRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LE +L +++HL ++G + A +N + + + + + Sbjct: 60 VFGLEDDLWLVLHLMIAGRLHWKAAGVALKGRNYL---AALDFDDGS----LVLTEAGAK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + L + + G + +A +N LK AL + + ++GI Sbjct: 113 RRASLHLFR--GEAALRTVDPGGIDVFTADLDA--FRAALTIENRTLKRALTDPRFLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A+LSPI +T L D +L + L ID + Sbjct: 169 GNAYSDEILWAAQLSPIAQTHKL------KSDEWQRLYDATRATLQTWIDRFAAEA--AK 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK GEPC CG+ + RI A T YC CQ Sbjct: 221 KFPEKVTAFRPEMAVHGKYGEPC-PRCGEKVLRIRYADNETNYCARCQ 267 >gi|302539979|ref|ZP_07292321.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457597|gb|EFL20690.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 289 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 4/207 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + L + + ++ + +A G+ + R K+L Sbjct: 1 MPELPEVEALAGILADRAVGREIARVLPVAVSVLKTYDPPLTA-LEGRTVTAAGRHGKFL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++VHL +G + P + + L + + + R Sbjct: 60 DLATD-GPHLVVHLARAGWLRWKDGLPEAPPRPGRGPLALRLLLSGPERSGFDLTEAGSR 118 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + V + P + LGP+P D +F +K L +Q ++AGI Sbjct: 119 KGLAVYCVRDPGE--VPGIARLGPDPLDGAFTREAFAGLLRGVRHRIKGVLRDQSVIAGI 176 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN 207 GN Y E L A++SP R L + Sbjct: 177 GNAYSDEILHAARMSPYRLASDLTEEE 203 >gi|258652633|ref|YP_003201789.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] gi|258555858|gb|ACV78800.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Nakamurella multipartita DSM 44233] Length = 282 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 104/291 (35%), Gaps = 25/291 (8%) Query: 4 LPEVEIIRR---NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE + R + V RF + G + K L Sbjct: 1 MPEGHVTHRLAIGFTERLAGAPVRS---TSPQGRF---AEEAGEVDGHLLDAAEAYGKNL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G+ ++ VHLG++G + P + + N Y D R Sbjct: 55 FVHF-GDRAVHVHLGLAGKLAFVGDDGGGAAR-PITGAIRWRVENERG-------YADLR 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 LV+ + LGP+P + + + + + L++Q+I AG+ Sbjct: 106 GPQACKLVDDAGIRSITD--PLGPDPLREDADPEVGWARVRRSATPIGLLLMDQRISAGV 163 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNI+ E L+R ++ P+ + R L + D++ + ++K ID + + Sbjct: 164 GNIFRAEVLYRHRIDPMMQGRLLRRKEWDAIWTDLVGLMHDAVRKGRIDTVRPEHDPV-- 221 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + + CL C +R GR+ F+C CQ+ Sbjct: 222 AMGRAPRVDRHGGEVYVYRRADQACL-VCATPVRTTTLGGRNLFWCPSCQR 271 >gi|158333840|ref|YP_001515012.1| endonuclease VIII [Acaryochloris marina MBIC11017] gi|158304081|gb|ABW25698.1| Endonuclease VIII (DNA glycosylase/AP lyase Nei) [Acaryochloris marina MBIC11017] Length = 273 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 111/294 (37%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + N + ++ +L+ + A +I V R K L Sbjct: 1 MPEGPEIRRAADRIASEIANQPLQEVWFAFSHLKI-----YEAQLGASQIQQVETRGKGL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ + LSI H + G ++I K + ++L + +K ++Y+ Sbjct: 56 LMHFDCGLSIYSHNQLYGKWMIRKAYNYPQTK----RQLRLALHCD---RKSALLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 +D+++ + +P L +GP+ + + + + L LL+Q + Sbjct: 109 ----IDVLDAAGIQAHPFLSRIGPDVLSSETTVEQVRERLSCDRFRRRRLTTLLLDQHFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E L+ A++ P + + KL + + + + GG + Sbjct: 165 AGLGNYLRSEILFVARVHPSLRPADCTDEQ------IEKLAEAALALPRQSYETGGITND 218 Query: 238 DYVHIDGSIGYFQN---AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + G+ C C I + Q GR +YC CQ Sbjct: 219 IAWAAKLKFQGFARRVYRHWVFARAGQLCW-VCATPIVKDAQGGRRYYYCPQCQ 271 >gi|148274094|ref|YP_001223655.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147832024|emb|CAN02997.1| putative DNA glycosylase/endonuclease VIII [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 269 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 107/295 (36%), Gaps = 39/295 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V ++ L + V D L A G++I K+L Sbjct: 1 MPEGDSVFVLAARLRAQVGGALVADGELRSG-------ARAGARLGGRRITGFDTHGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ L+ ++ HL M GS+ + P + V + L + + D Sbjct: 54 LMRLDDATTLHTHLRMQGSWTVTGAGKRVPQRIQHQVRVRLRLDDGRTLWGIDLPVVD-- 111 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 L+ T + + LGP+P + ++ + + + ++ ALL+Q+ +AG Sbjct: 112 ------LIPTRDERA--AIGHLGPDPLRDDWDPALAVSRLAARPDDAIRAALLDQRPMAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++V E + + P + R + D+ + ++ V G R Sbjct: 164 LGNLWVNEVGFLRGVHPATRVRDVDLPPLV--DLAARSLRHSATVPAAYQITTGDPRRGR 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR------RIVQAGRSTFYCTYCQ 288 H V G+ G PCL CG + + GR ++C CQ Sbjct: 222 TH------------WVVGRAGRPCL-RCGTTVIGVDDPGSTSERGRRAWWCPRCQ 263 >gi|41409514|ref|NP_962350.1| hypothetical protein MAP3416 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398345|gb|AAS05966.1| Nei [Mycobacterium avium subsp. paratuberculosis K-10] Length = 250 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 92/293 (31%), Gaps = 47/293 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + ++ R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLLGETLTRCDIR-------VPRFATVDLTGQVVDEILSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + V + + Sbjct: 54 FIRV-GAASIHSHLKMEGSWRVGP-------------RVRVDHRARIVLETGAATAVGVD 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 L + LGP+ ++ + ALL+Q+++AG Sbjct: 100 LGVLQIL---DRDRDGEAVAHLGPDLLGEDWDPARAAANLAARPQRPIAEALLDQRVLAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + P ++ +D+L+ + G Sbjct: 157 IGNVYCNELCFVSGHLPTTPVSAVADPRRLVSRARDMLWLNRFRWNRCTTGDTRNG---- 212 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG I R T++C CQ+ Sbjct: 213 --------------RQLWVYGRAGQPC-RRCGTPIEFDDSGDRVTYWCPSCQR 250 >gi|314923839|gb|EFS87670.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL001PA1] gi|314966148|gb|EFT10247.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL082PA2] gi|314982012|gb|EFT26105.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA3] gi|315090827|gb|EFT62803.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL110PA4] gi|315095039|gb|EFT67015.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL060PA1] gi|315104377|gb|EFT76353.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Propionibacterium acnes HL050PA2] gi|327328183|gb|EGE69952.1| DNA-formamidopyrimidine glycosylase [Propionibacterium acnes HL103PA1] Length = 235 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 32/254 (12%) Query: 45 TRGKKIIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 G + K+L+++ + + + +HLG+ G + T P V + Sbjct: 2 LDGTVLTSAQAWGKHLVVDFDNHRPDHLLHIHLGLIGKLAVGPT-------VPVVGQVRL 54 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 +T+ V D R +L+ T+GP+P + ++ + Sbjct: 55 RITDG-------VTAADLRGPQTCELINDDEWGTVA--ATIGPDPIRDDADSDVAWDKVR 105 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + + + LL+Q++ AG+GNIY E L+R ++ P + + + + ++ Sbjct: 106 RSSRRISDVLLDQRVAAGVGNIYRAEVLFRHRVDPATPGKQISHS------TWLAMWDDL 159 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIG------YFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ +++G H ++G VY + +PCL C +R + Sbjct: 160 VMLMRAGVESGRIDTVQPEHTPEAMGRPPRVDRHGGEVYVYRREDQPCL-VCNTPVRMVA 218 Query: 276 QAGRSTFYCTYCQK 289 Q GR F+C CQ+ Sbjct: 219 QGGRHLFWCPRCQR 232 >gi|83644837|ref|YP_433272.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|83632880|gb|ABC28847.1| Formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 302 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 106/289 (36%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P++ + L + + + LH L A G K+ + R K + Sbjct: 1 MPEYPDITVYIDALERRVLGRVLESVELHSYFLLRTAEPSL-EAVVGAKVTQLRRIGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + ++ ++ HL ++G P KN +++ N + + Sbjct: 60 AIGFDNDVWMVFHLMIAGRLHWRDAGKKTPGKNAL---ISLQFPNGV----LFLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADN-SFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 + + LV L + P + + + N LK AL + I +G Sbjct: 113 KRASLHLVSGER-----GLAQINPGGLEILEADLPAFQQALTRNNHTLKRALTDPHIFSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E L A+LSPI +T+ L + +L Q + L D Sbjct: 168 VGNAYSDEILHAARLSPIAQTQKLNAEE------IERLYQACRSCLTTWTQRLRDQYGDA 221 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ PC CG ++RI A T YC CQ Sbjct: 222 F--PEKVTAFREDMAVHGRYNLPC-PVCGGAVQRIRYATNETNYCPDCQ 267 >gi|227506303|ref|ZP_03936352.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227197115|gb|EEI77163.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 272 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 108/290 (37%), Gaps = 27/290 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE II + + + + RF +A G ++ R K+L + Sbjct: 1 MPEGHIIHHLAQRLDREFRGGPLRVTSPQGRFAAE---AAVLDGTQLDFAEARGKHLFLH 57 Query: 64 LEGNL---SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + I +HLG+ GS E + + + ++ R Sbjct: 58 FSADAPEHIIYIHLGLIGSLRFEPLDVV-------WGQIRLRIESDDLAANL-------R 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + L+ + L +G +P + L + H+ + ++ + L++Q + AG+ Sbjct: 104 GPQWCRLITDAEYDV--ALAKIGHDPIREDASPANLWPRVHRSSRSIGSLLMDQHLFAGV 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E L+R +SP L ++ +D++ + + ID + + + Sbjct: 162 GNIYRAEVLFRQNISPFIAGNELDRHEFDVIWEDLVELMRAGVPTARIDTVRPEHTP--E 219 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY + G PC CG++I GR+ F+C CQ Sbjct: 220 AMGRAPRKDDHGGEVYVYRRAGMPCY-ICGELIAEKKLEGRNLFWCPTCQ 268 >gi|323357450|ref|YP_004223846.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273821|dbj|BAJ73966.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 258 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 104/293 (35%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + VT + P +A RG+ + +V+ R K+L Sbjct: 1 MPEGDTVYRAAAKLSAALAGKVVTRFDIR-------VPGSATADLRGETVHEVAARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G ++ HL M G + + + + P I + + + Sbjct: 54 LHRI-GGYTLHSHLKMEGRWDVYRPG--ERWRRPAFKARAIVGVAGADAVGFDL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 ++++ T+ + + + LGP+ + ++ + + ALL+Q+ VAG Sbjct: 105 --AMVEVLRTTDE--HTVIGHLGPDLLADDWDEAEAVRRVGADTREVHVALLDQRNVAGF 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+Y E L+ ++P + + + I A Sbjct: 161 GNVYANELLFVRGIAPTTPATEID-------------VPATIALGERMIRANLPRPERTF 207 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 D G F VYG+ G PC CG IR R+ ++C CQ Sbjct: 208 TGDTRPGR---RFWVYGREGAPC-RRCGTPIRATALGASATSERNVYWCPTCQ 256 >gi|159037002|ref|YP_001536255.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] gi|157915837|gb|ABV97264.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Salinispora arenicola CNS-205] Length = 270 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 102/299 (34%), Gaps = 45/299 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T P + G + + + R K+L Sbjct: 1 MPEGDMVWNTARVLQQALAGDRLTGSEFR-------VPRLATTNLAGWTVHESASRGKHL 53 Query: 61 LIELEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ L ++ HL M G++ + + P H + Sbjct: 54 LLRLASPRTDHGGGGERWTLHSHLRMDGTWR-TYPPGRRWSARPAHLIRAVLRGPRAVAV 112 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKN 169 Y + DL + + LGP+ ++ + + + + Sbjct: 113 GYHL----------HDLALVPTAEEQRLVGHLGPDLLGPDWDPVEAVRRLTADPEATIGT 162 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 ALL+Q+ +AG+GN+Y CE L+ +SP R++ G + +L+ + Sbjct: 163 ALLDQRSLAGVGNLYKCEVLFLRGVSPWTPVRAVPDLIGVVT-LAQRLLAANRGHGT--- 218 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VYG+ +PC CG IRR Q R T++C CQ Sbjct: 219 -----------QSSTGSRHRGQTTYVYGRWAQPC-RRCGTPIRRQEQDERVTYWCPTCQ 265 >gi|25029390|ref|NP_739444.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|23494678|dbj|BAC19644.1| putative DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 307 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 110/307 (35%), Gaps = 55/307 (17%) Query: 4 LPEVEIIRR------------NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 +PE +I R L + + RF +++ Sbjct: 35 MPEGHVIHRLAGELTQRFGNSGLGPAL--------DITSPQGRFAREAAIVDQ---SRLL 83 Query: 52 DVSRRAKYLLIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L I+ + I +HLG+ G+ E + + + +++ Sbjct: 84 RADAHGKHLFIDFDVDHPEHIIYIHLGLIGTLQFEPAGETR-------GQIRLHISDGAV 136 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R + L+ + + LG +P + + + + + ++ Sbjct: 137 AANL-------RGPQWCRLITDEERD--IAIGKLGADPIRDDADPEPIRRRVQRSGRSIG 187 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + L++QK+ AG+GNIY E L+R +SP R + T + ++ ++ + Sbjct: 188 SLLMDQKLFAGVGNIYRAETLFRLGISPFTPGREITDAQFTS------IWTDLVGLMKEG 241 Query: 229 IDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + AG + H +G Y +TG+PC CG IR V GR+ F Sbjct: 242 VTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYTYRRTGQPCYL-CGTPIRDQVMEGRNLF 300 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 301 WCPECQR 307 >gi|50954590|ref|YP_061878.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951072|gb|AAT88773.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 330 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 114/342 (33%), Gaps = 71/342 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V I R + RF + G+ +I K + Sbjct: 1 MPEGHSVHRIARQFAATFVGHP---AAVSSPQGRF---AEDAKRIDGRTMIAAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP------------------------------ 90 +E + L + VHLG+ G++ P Sbjct: 55 FLEFDNGLWLRVHLGIYGAWDFAGDIGVDPTIASANGRMGQTQQKGTAAQRGTIFDGDGE 114 Query: 91 -----IKNPQHNHVTISLTN------------NTNTKKYRVI----YNDPRRFGFMDLVE 129 I P+ V +S T + R++ D R +++ Sbjct: 115 NSLHSIGAPRRTRVRMSETEKAQPEIESFPPEPVGQVRVRLLTASAVADLRGPTVCAVLD 174 Query: 130 TSLKYQYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + LGP+P +S KK + + L++Q +V+GIGN+Y E Sbjct: 175 PQEVAAV--IARLGPDPMLDSGPVAEETFVAAVRKKPTAIALLLMDQSVVSGIGNVYRAE 232 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG--- 244 L+RA+ +P + +DI+ L ++ ++ ++ G D + + Sbjct: 233 LLFRARQNPHTPGK------LVAEDIVRALWRDWVQLHRIGVETGQMMTMDDLDEEAYRR 286 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 ++ ++ VY + G PC CG I V GR ++C Sbjct: 287 AMAKREDRHWVYKREGLPC-RVCGTHIVMEVFGGRKLYWCPR 327 >gi|116621959|ref|YP_824115.1| endonuclease VIII/DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] gi|116225121|gb|ABJ83830.1| endonuclease VIII / DNA-(apurinic or apyrimidinic site) lyase [Candidatus Solibacter usitatus Ellin6076] Length = 250 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 45/291 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + R L + VT L + G+ + V K+L Sbjct: 1 MPEGDTIFRTARTLQAAIGGREVTRFESVLPKLERV---DYDTPLAGRTVEKVEANGKWL 57 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI G+L ++ H+ MSGS+ I + + P++ + T+ +RV Sbjct: 58 LIYFSGDLILLTHMLMSGSWHIYRPG--ERWQRPRNEMRIVIETDAMVAVAFRVPVA--- 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + + L LGP +F+A + L ALL+Q+++AG Sbjct: 113 -----EFHTAHSLARREGLNQLGPSALAENFDAETAVANLASRPDLELGLALLDQRLIAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E + LSP R SL + L +L+ +++L Sbjct: 168 LGNLFKSEVAFACGLSPFRTVASLSRIQ------LEELVTTSRRLLQA------------ 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ--AGRSTFYCTYCQ 288 + +VYG+ GEPC CG IR GR +F+C CQ Sbjct: 210 ----------RPVPNVYGRAGEPC-RRCGTSIRSAKHRDDGRVSFWCPVCQ 249 >gi|218662133|ref|ZP_03518063.1| formamidopyrimidine-DNA glycosylase [Rhizobium etli IE4771] Length = 176 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 77/162 (47%), Positives = 102/162 (62%), Gaps = 10/162 (6%) Query: 50 IIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPI--------KNPQHNHVTI 101 + + RRAKYLL++L+ ++I HLGMSGSF IE + ++ K+ +H+HV Sbjct: 12 LSGLGRRAKYLLVDLDDGNTLISHLGMSGSFRIEEGAVSETPGEFHHARSKDEKHDHVIF 71 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 L + RV+YNDPRRFGFMD+V + +P R LGPEP N A YL +F Sbjct: 72 HLEGGGGPR--RVVYNDPRRFGFMDIVGRADLAAHPFFRDLGPEPTGNELGATYLAERFR 129 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 K LK+ALL+QK +AG+GNIYVCEALWR+ LSPIR +L Sbjct: 130 DKAQPLKSALLDQKNIAGLGNIYVCEALWRSHLSPIRAAGTL 171 >gi|259508429|ref|ZP_05751329.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] gi|259163983|gb|EEW48537.1| DNA-formamidopyrimidine glycosylase [Corynebacterium efficiens YS-314] Length = 273 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 110/307 (35%), Gaps = 55/307 (17%) Query: 4 LPEVEIIRR------------NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 +PE +I R L + + RF +++ Sbjct: 1 MPEGHVIHRLAGELTQRFGNSGLGPAL--------DITSPQGRFAREAAIVDQ---SRLL 49 Query: 52 DVSRRAKYLLIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 K+L I+ + I +HLG+ G+ E + + + +++ Sbjct: 50 RADAHGKHLFIDFDVDHPEHIIYIHLGLIGTLQFEPAGETR-------GQIRLHISDGAV 102 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 R + L+ + + LG +P + + + + + ++ Sbjct: 103 AANL-------RGPQWCRLITDEERD--IAIGKLGADPIRDDADPEPIRRRVQRSGRSIG 153 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 + L++QK+ AG+GNIY E L+R +SP R + T + ++ ++ + Sbjct: 154 SLLMDQKLFAGVGNIYRAETLFRLGISPFTPGREITDAQFTS------IWTDLVGLMKEG 207 Query: 229 IDAGGSSLRDYVHIDGSIGY------FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 + AG + H +G Y +TG+PC CG IR V GR+ F Sbjct: 208 VTAGRIDTVRHEHTPEVMGRAPRKDDHGGEVYTYRRTGQPCYL-CGTPIRDQVMEGRNLF 266 Query: 283 YCTYCQK 289 +C CQ+ Sbjct: 267 WCPECQR 273 >gi|226305585|ref|YP_002765545.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226184702|dbj|BAH32806.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 263 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 109/294 (37%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T + P + + G ++ V+ R K+L Sbjct: 1 MPEGDTVWRAANDLRAALAEKVLTTCDVR-------VPRYATVDLSGHRVDSVASRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G SI HL M G + I + + P H I T ++ + + Sbjct: 54 LIRV-GEASIHTHLKMEGQWQIYRPG--ERWRRPAHQARIILATEDSVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 G +++E + + + LGP+ +++ +S + ALL+Q+++AG Sbjct: 105 --GVTEILELGQEQE--AVGHLGPDLLGTDWDSSVAARNLRAADSVPIGIALLDQRVMAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + + P T + I + I+ S Sbjct: 161 LGNVYRNEICFLRGIHPKTPTHR------------AGNLDAIVDLSFRTINVNKSRRIRV 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 D G VYG+ G+PC CG IR R+ F+C CQ Sbjct: 209 TTGDTRPGR---QTWVYGRRGKPC-RRCGTRIREDTLGPDQLTERNIFFCPACQ 258 >gi|312140746|ref|YP_004008082.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325675614|ref|ZP_08155298.1| endonuclease VIII [Rhodococcus equi ATCC 33707] gi|311890085|emb|CBH49403.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325553585|gb|EGD23263.1| endonuclease VIII [Rhodococcus equi ATCC 33707] Length = 265 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 112/294 (38%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T+ + P + + G+ + V R K+L Sbjct: 1 MPEGDTVWQAARRLDTALAGRVLTECDIR-------VPRYATVDLSGEAVDAVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G +I HL M GS+ + + P H + T +T + + Sbjct: 54 LTRI-GAHTIHTHLKMEGSWQVYPRGA--RWRRPAHQARIVLGTEDTVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT-HQFHKKNSNLKNALLNQKIVAG 179 G ++V+ S + + LGP+ ++A T + + ALL+Q+I+AG Sbjct: 105 --GITEVVDRSDEESV--VGHLGPDLLGADWDAAVATSNLVAAGERPIGEALLDQRIMAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P T + + D+ +++++ + Sbjct: 161 IGNVYRNEICFLRGVDPRTPTARV-PDLPKVVDLAHRVLRANRD--------------RP 205 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 V + VYG+ G+PCL CG I RS F+C CQ Sbjct: 206 VRVTTGDRRPGRRDWVYGRGGKPCL-RCGTPIAAAEFGEEPGRERSIFWCPNCQ 258 >gi|306818563|ref|ZP_07452286.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] gi|304648736|gb|EFM46038.1| DNA-formamidopyrimidine glycosylase [Mobiluncus mulieris ATCC 35239] Length = 237 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 31/241 (12%) Query: 62 IELEGNLS-IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +EL GN + HLGMSG + A I H + +L N +++ D R Sbjct: 1 MELSGNQTAWCFHLGMSGQLRL----AAGDITALPHERLRFTLDNG-----LELVFCDQR 51 Query: 121 RFGFMDLVE-------------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 FG ++ T L + + D + + ++ + + Sbjct: 52 TFGHTEVRALEPTTDGAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRAI 111 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q V+GIGNIY E L+ A + P R+L + L L++ V+ Sbjct: 112 KTKLLDQATVSGIGNIYADETLFAAGVHPATLARNLSGED------LRNLLEVAASVMRH 165 Query: 228 AIDAGGSSLRD-YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 A++ GG+S YV G+ G F + VYG+ G+ C CGQ + +IV GR+T +C + Sbjct: 166 ALEFGGTSFDQLYVDSWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRATVFCAH 224 Query: 287 C 287 C Sbjct: 225 C 225 >gi|229489614|ref|ZP_04383477.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] gi|229323711|gb|EEN89469.1| endonuclease VIII and DNA n-glycosylase with an ap lyase activity [Rhodococcus erythropolis SK121] Length = 268 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 110/294 (37%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T + P + + G ++ V+ R K+L Sbjct: 6 MPEGDTVWRAANELRAALAEKVLTTCDVR-------VPRYATVDLSGHRVDSVASRGKHL 58 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G SI HL M G + I + + P H + T ++ + + Sbjct: 59 LIRV-GEASIHTHLKMEGQWQIYRPG--ERWRRPAHQARILLATEDSVAVGFSL------ 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 G +++E + + + LGP+ +++ +S + ALL+Q+++AG Sbjct: 110 --GITEILELGQEQE--AVGHLGPDLLGTDWDSSVAARNLRAADSVPIGIALLDQRVMAG 165 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + + P T L N D+ ++ I + I Sbjct: 166 LGNVYRNEICFLRGIHPKTPTH-LAGNLDAIVDLSFRTINVNKSRRIRV----------- 213 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 D G VYG+ G+PC CG I R+ F+C CQ Sbjct: 214 TTGDTRPGR---QTWVYGRRGKPC-RRCGTRITEDTLGPDQLTERNIFFCPACQ 263 >gi|145225389|ref|YP_001136067.1| formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] gi|145217875|gb|ABP47279.1| Formamidopyrimidine-DNA glycolase [Mycobacterium gilvum PYR-GCK] Length = 250 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 105/290 (36%), Gaps = 41/290 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLRDALEGRELTRCDIR-------VPRYAAVDLSGQVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M G+++I + I L T R D Sbjct: 54 FIRV-GQASIHSHLKMDGAWVIGRVRVPTY-------KIRIVLE----TANSRASGVD-- 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G +++++ + + + LGP+ ++A L LL+Q+++AG Sbjct: 100 -LGVLEVLDRATDME--AVEHLGPDLLGEDWSAEVAAANLVADPERPLAETLLDQRVMAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E + L P L D L + Q + ++ + ++ Sbjct: 157 VGNVFANELSFVFGLRPGTPVGELT-------DPLRVANRAQQMLWLNRLRVNRTTT--- 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G PC CG I R T++C CQ+ Sbjct: 207 -----GNTRPGQDVWVYGRAGLPC-RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|282875890|ref|ZP_06284757.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] gi|281294915|gb|EFA87442.1| putative formamidopyrimidine-DNA glycosylase [Staphylococcus epidermidis SK135] Length = 201 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 19/217 (8%) Query: 76 MSGSFIIEHTSCAKPIKN-PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 M+G F + + N +H V L N K +++Y+D RRFG ++ Sbjct: 1 MAGGFFVVNNLDEISTPNYRKHWQVIFDLDN-----KQKLVYSDIRRFG--EIRNIVNFD 53 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNS--NLKNALLNQKIVAGIGNIYVCEALWRA 192 YP L + PEP + YL KK +K +L+ +++AG GNIY CEAL+RA Sbjct: 54 SYPSLLEIAPEPFEEVAFEHYLECLTMKKYKNKPIKQTILDHRVIAGAGNIYACEALFRA 113 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 ++P + T SL + L +++VL + I GG+S+ DY H DG G Q Sbjct: 114 GITPDKITNSLTKQERKS------LFYYVREVLEEGIKYGGTSISDYRHADGKTGQMQLH 167 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +VY + + C CG I V AGR++ +C CQ+ Sbjct: 168 LNVYKQ--KKC-KVCGHSIETKVIAGRNSHFCPNCQR 201 >gi|304390860|ref|ZP_07372812.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325743|gb|EFL92989.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 342 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 117/351 (33%), Gaps = 74/351 (21%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + M+ + RF +A G+++ DV K+L + Sbjct: 1 MPEGHAIHRLAAQFAQVMSGEVVAASSPQGRFTAG---AAVLNGQRLTDVQAYGKHLFLG 57 Query: 64 L---------------EGNLSIIVHLGMSGSFIIEHTS-------------------CAK 89 + +HLG+ GS+ S A+ Sbjct: 58 FAPRQVDTAQTTPDSKSSLTWLHIHLGIYGSWRFYGDSEFTSRHVGTALNLPESTQQTAE 117 Query: 90 PIKNPQHNH-------VTISLTNNT-------------NTKKYRVIYN----DPRRFGFM 125 ++ P H H + T + R++ D Sbjct: 118 IVEIPVHTHHDDSVFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGPNTC 177 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 +L++ LGP+P N + + + AL++Q ++AG+GNIY Sbjct: 178 ELLDVEGVAAV--FARLGPDPLRPDCNCGEFVKRCATRQKGIGEALMDQSVIAGVGNIYR 235 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY------ 239 E L+ A+L P R + ++ ++E + +++ +S DY Sbjct: 236 AEVLYAARLDPFTPAREVSSRKLR---RIWDWLEEYLPLGVESGRITTTSPDDYAVFVER 292 Query: 240 -VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + VY + PCL C ++ + GR ++C CQ+ Sbjct: 293 ELAAGREPRAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|152964122|ref|YP_001359906.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] gi|151358639|gb|ABS01642.1| DNA-(apurinic or apyrimidinic site) lyase [Kineococcus radiotolerans SRS30216] Length = 273 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 113/295 (38%), Gaps = 30/295 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELPEV+ R+ + T+ D+ R P A G+ + RR K Sbjct: 1 MPELPEVQSARQVVERGGLFRTIADVDDRDTYACRPHAPGDLRRALVGRTLTAAHRRGKS 60 Query: 60 LLIELEG-----NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL-TNNTNTKKYR 113 + + G ++ +HLGMSG + A + + S ++ Sbjct: 61 MWCDTSGRDGDEGPALGIHLGMSGRIFVSSAGGADLLVGGDYAGPRESPNPVKEEWYRFT 120 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + + D + D P + LGP+ + + ++ LK LL+ Sbjct: 121 LDFEDGGQLRLFDKRRLGRVRLDPDVDALGPDA--ELVGREEFRERIGRGSAPLKARLLD 178 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q +VAGIGN+ E LWRA+ SP++ L L +L +E++ + A+ GG Sbjct: 179 QSVVAGIGNLLADEVLWRARASPLKPAGELRAEE------LDELRRELRAAIRHAVRHGG 232 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + V + G C CG + R GR+T++C+ Q Sbjct: 233 VHTGEVVP--------------HRTAGGHC-PRCGAEMVRATVGGRTTWWCSAEQ 272 >gi|118618117|ref|YP_906449.1| endonuclease VIII Nei [Mycobacterium ulcerans Agy99] gi|118570227|gb|ABL04978.1| endonuclease VIII Nei [Mycobacterium ulcerans Agy99] Length = 254 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 109/293 (37%), Gaps = 43/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAARLRQYLAGKTLTRCDIR-------VPRFATVDLTGQVVEEVQSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I +SI HL M GS+ + +P + H + + + R + D Sbjct: 54 FIRT-ALVSIHSHLKMDGSWRVGD----RPPRVDHHARIILEAND------IRAVGVD-- 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 G ++L+E + + LGP+ ++ + + + ALL+Q+++AG Sbjct: 101 -LGVLELLERDNEGAV--VAHLGPDLLGEDWDPHIAAANLAADPHRCIAEALLDQRVLAG 157 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P + + L + + + + + + ++ D Sbjct: 158 IGNVYCNELCFVSGHLPTAPVSDVAKP-------LRLVTRAREMLWANRLRWNRTTTGDT 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQK 289 VYG+ G+PC C I R G R ++C CQ+ Sbjct: 211 --------RAGRQLWVYGRAGQPC-RRCATGIERQGPDGSSERVRYWCPACQR 254 >gi|183981259|ref|YP_001849550.1| endonuclease VIII Nei [Mycobacterium marinum M] gi|183174585|gb|ACC39695.1| endonuclease VIII Nei [Mycobacterium marinum M] Length = 254 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 108/293 (36%), Gaps = 43/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + V R K+L Sbjct: 1 MPEGDTVWHTAARLRQYLAGKTLTRCDIR-------VPRFATVDLTGQVVEQVQSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I +SI HL M GS+ + +P + H + + + R + D Sbjct: 54 FIRT-ALVSIHSHLKMDGSWRVGD----RPPRVDHHARIILEAND------IRAVGVD-- 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 G ++L+E + + LGP+ ++ + + + ALL+Q+++AG Sbjct: 101 -LGVLELLERDNEGAV--VAHLGPDLLGEDWDPHIAAANLAADPHRCIAEALLDQRVLAG 157 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN+Y E + + P + + L + + + + + + ++ D Sbjct: 158 IGNVYCNELCFVSGHLPTAPVSDVAKP-------LRLVTRAREMLWANRLRWNRTTTGDT 210 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQK 289 VYG+ G+PC C I R G R ++C CQ+ Sbjct: 211 --------RAGRQLWVYGRAGQPC-RRCATGIERQGPDGSSERVRYWCPACQR 254 >gi|58270186|ref|XP_572249.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57228507|gb|AAW44942.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 475 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 23/251 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K + L G ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 108 NT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D RR G + LV + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLV-SDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++Q AG+GN E L++A++ P +L + N + L +++ V Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQN------IRDLHHQLRAV 233 Query: 225 LIDAIDAGGSS 235 + AI S Sbjct: 234 PLTAISVNADS 244 >gi|301318232|gb|ADK67031.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas humi] Length = 155 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P G++I + RRAKYLL++ + +++ HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPAEIEQQLPGQRIEAIRRRAKYLLLDTDVGSALL-HLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLEDGR-----LLRFNDPRRFGC--LLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D+ F+ YL H+ +++ +K L++Q+IV G+GNI Sbjct: 109 ELLRELGPEPLDDVFDGDYLFHRSRGRSAAVKTFLMDQRIVVGVGNI 155 >gi|199594616|gb|ACH90772.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas nitritireducens] Length = 155 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P G++I + RRAKYLL++ + +++ HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPAEIERELPGQRIAAIRRRAKYLLLDTDAGSALL-HLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLEDGR-----LLRFNDPRRFGC--LLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D++F+ YL + +++ +K L++Q+IV G+GNI Sbjct: 109 ELLRALGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQRIVVGVGNI 155 >gi|182413447|ref|YP_001818513.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177840661|gb|ACB74913.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 301 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR-KNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+V + L + + I L LR P + +++ + R K Sbjct: 1 MPELPDVTVYLEALERRLIGRVLEKIRLLDLFVLRTALPP--IDSLESRRVERLRRLGKR 58 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + + + +++HL ++G KN N T + Sbjct: 59 IALGFDDGRWLVIHLMIAGRLQWTPPGEKSRAKNV---IAEFRFENGT----LALTEAGT 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 +R + +V + G + + + + ++N LK AL + ++ +G Sbjct: 112 KRRASLHVVADEAGLEAHD--RGGIDVL--TCSPEEFRGRLMRENHTLKRALTDPQLFSG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSP+ T+ L + +L + ++VL+ D + Sbjct: 168 IGNSYSDEILHAAKLSPVTLTQKLSPEE------IARLHRSTREVLMAWTDRLRREAGE- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK G+PC CG ++RIV A YC CQ Sbjct: 221 -GFPEKVTAFRPEMAVHGKFGKPC-PVCGTTVQRIVYAENEVNYCPRCQ 267 >gi|134117606|ref|XP_772574.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255189|gb|EAL17927.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] Length = 475 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 23/251 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K + L G ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 108 NT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D RR G + LV + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLV-SDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++Q AG+GN E L++A++ P +L + N + L +++ V Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQN------IRDLHHQLRAV 233 Query: 225 LIDAIDAGGSS 235 + AI S Sbjct: 234 PLTAISVNADS 244 >gi|15610433|ref|NP_217814.1| endonuclease VIII [Mycobacterium tuberculosis H37Rv] gi|15842888|ref|NP_337925.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31794477|ref|NP_856970.1| endonuclease VIII [Mycobacterium bovis AF2122/97] gi|121639186|ref|YP_979410.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121639220|ref|YP_979444.1| putative endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663160|ref|YP_001284683.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148824499|ref|YP_001289253.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|167968929|ref|ZP_02551206.1| endonuclease VIII nei [Mycobacterium tuberculosis H37Ra] gi|215405310|ref|ZP_03417491.1| endonuclease VIII nei [Mycobacterium tuberculosis 02_1987] gi|215413175|ref|ZP_03421876.1| endonuclease VIII nei [Mycobacterium tuberculosis 94_M4241A] gi|215428783|ref|ZP_03426702.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|215447604|ref|ZP_03434356.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|218755079|ref|ZP_03533875.1| endonuclease VIII nei [Mycobacterium tuberculosis GM 1503] gi|219559358|ref|ZP_03538434.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|224991679|ref|YP_002646368.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253800340|ref|YP_003033341.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|254233906|ref|ZP_04927231.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|260188345|ref|ZP_05765819.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|260202459|ref|ZP_05769950.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|260206649|ref|ZP_05774140.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289444879|ref|ZP_06434623.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289448986|ref|ZP_06438730.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289555575|ref|ZP_06444785.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289571524|ref|ZP_06451751.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289576017|ref|ZP_06456244.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289747115|ref|ZP_06506493.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289751993|ref|ZP_06511371.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289759441|ref|ZP_06518819.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|289763485|ref|ZP_06522863.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|294993762|ref|ZP_06799453.1| endonuclease VIII nei [Mycobacterium tuberculosis 210] gi|297635951|ref|ZP_06953731.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] gi|297732948|ref|ZP_06962066.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN R506] gi|298526773|ref|ZP_07014182.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777626|ref|ZP_07415963.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|306782348|ref|ZP_07420685.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|306786170|ref|ZP_07424492.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|306790538|ref|ZP_07428860.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|306795059|ref|ZP_07433361.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|306799256|ref|ZP_07437558.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|306805105|ref|ZP_07441773.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|306809292|ref|ZP_07445960.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|306969394|ref|ZP_07482055.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|306973746|ref|ZP_07486407.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|307081456|ref|ZP_07490626.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|307086058|ref|ZP_07495171.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|313660280|ref|ZP_07817160.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN V2475] gi|54037059|sp|P64157|Y3325_MYCBO RecName: Full=Putative DNA glycosylase Mb3325; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Mb3325; Short=Putative AP lyase Mb3325 gi|54041001|sp|P64156|Y3297_MYCTU RecName: Full=Putative DNA glycosylase Rv3297/MT3396; AltName: Full=Putative DNA-(apurinic or apyrimidinic site) lyase Rv3297/MT3396; Short=Putative AP lyase Rv3297/MT3396 gi|1877352|emb|CAB07061.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium tuberculosis H37Rv] gi|13883220|gb|AAK47739.1| endonuclease VIII [Mycobacterium tuberculosis CDC1551] gi|31620073|emb|CAD95417.1| PROBABLE ENDONUCLEASE VIII NEI [Mycobacterium bovis AF2122/97] gi|121494834|emb|CAL73315.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121494868|emb|CAL73351.1| Probable endonuclease VIII nei [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599435|gb|EAY58539.1| endonuclease VIII nei [Mycobacterium tuberculosis C] gi|148507312|gb|ABQ75121.1| endonuclease VIII [Mycobacterium tuberculosis H37Ra] gi|148723026|gb|ABR07651.1| endonuclease VIII nei [Mycobacterium tuberculosis F11] gi|224774794|dbj|BAH27600.1| putative endonuclease VIII [Mycobacterium bovis BCG str. Tokyo 172] gi|253321843|gb|ACT26446.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 1435] gi|289417798|gb|EFD15038.1| endonuclease VIII nei [Mycobacterium tuberculosis T46] gi|289421944|gb|EFD19145.1| endonuclease VIII nei [Mycobacterium tuberculosis CPHL_A] gi|289440207|gb|EFD22700.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 605] gi|289540448|gb|EFD45026.1| endonuclease VIII nei [Mycobacterium tuberculosis K85] gi|289545278|gb|EFD48926.1| endonuclease VIII nei [Mycobacterium tuberculosis T17] gi|289687643|gb|EFD55131.1| endonuclease VIII [Mycobacterium tuberculosis 02_1987] gi|289692580|gb|EFD60009.1| endonuclease VIII nei [Mycobacterium tuberculosis T92] gi|289710991|gb|EFD75007.1| endonuclease VIII [Mycobacterium tuberculosis GM 1503] gi|289715005|gb|EFD79017.1| endonuclease VIII nei [Mycobacterium tuberculosis T85] gi|298496567|gb|EFI31861.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214047|gb|EFO73446.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu001] gi|308325098|gb|EFP13949.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu002] gi|308329319|gb|EFP18170.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu003] gi|308333150|gb|EFP22001.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu004] gi|308336837|gb|EFP25688.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu005] gi|308340670|gb|EFP29521.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu006] gi|308344404|gb|EFP33255.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu007] gi|308348408|gb|EFP37259.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu008] gi|308353245|gb|EFP42096.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu009] gi|308356985|gb|EFP45836.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu010] gi|308360841|gb|EFP49692.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu011] gi|308364526|gb|EFP53377.1| endonuclease VIII nei [Mycobacterium tuberculosis SUMu012] gi|323718166|gb|EGB27348.1| endonuclease VIII nei [Mycobacterium tuberculosis CDC1551A] gi|326902475|gb|EGE49408.1| endonuclease VIII nei [Mycobacterium tuberculosis W-148] gi|328460074|gb|AEB05497.1| endonuclease VIII nei [Mycobacterium tuberculosis KZN 4207] Length = 255 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 101/293 (34%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAATLRRHLAGRTLTRCDIR-------VPRFAAVDLTGEVVDEVISRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G SI HL M GS+ + + I L N + RV+ D Sbjct: 54 FIRT-GTASIHSHLQMDGSWRVGNRPVRVDH------RARIILEANQQEQAIRVVGVDLG 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 +D + LGP+ + ++ + + ALL+Q+++AG Sbjct: 107 LLEVIDRHNDGAV-----VAHLGPDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAG 161 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + + P ++ +D+L+ + AG Sbjct: 162 IGNVYCNELCFVSGVLPTAPVSAVADPRRLVTRARDMLWVNRFRWNRCTTGDTRAG---- 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+ C CG +I R ++C CQ+ Sbjct: 218 --------------RRLWVYGRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|256825591|ref|YP_003149551.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] gi|256688984|gb|ACV06786.1| formamidopyrimidine-DNA glycosylase [Kytococcus sedentarius DSM 20547] Length = 262 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + + L R +LR+ P + G+ ++V R K+L Sbjct: 1 MPEGDTVWRTARRLHLALAGR-----ELTRTDLRW--PSLATVDLTGRTTLEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +EG L++ HL M GS+ + P + P ++ T Sbjct: 54 LHRIEGGLTLHSHLRMEGSWRVHPAPG--PRRVPSTTRAVVASTE---------FVAVGT 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAG 179 G +DL +T + + LGP+ ++ + + L ALL+Q+I AG Sbjct: 103 SLGMLDLADTRAEDD--LVGHLGPDLLGPDWDRDRAMAGYAAAGSRPLGEALLDQRIAAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ-EIQKVLIDAIDAGGSSLRD 238 IG +Y E+L+ ++SP L D L++++ Q +L++ A + D Sbjct: 161 IGTMYAAESLFLRRVSPWTTVAELT------TDQLWRVVDTARQALLVNCARAVQRTTPD 214 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + V+G+ PCL NCG IR R F+C CQ Sbjct: 215 TMRELK---------WVHGRADRPCL-NCGTPIRVDPIGAAPADRVMFHCPVCQ 258 >gi|199594618|gb|ACH90773.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas acidaminiphila] Length = 155 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ + + L R +LR+ P A G++I + RRAKYLL++ + +++ HLGM Sbjct: 1 HLQGRRIHGVILRRPDLRWPIPPDIERALPGQRIAAIRRRAKYLLLDTDAGSALL-HLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLEDGR-----LLRFNDPRRFGC--LLWQPPGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D +F+ YL + +++ +K+ L++Q+IV G+GNI Sbjct: 109 ELLRGLGPEPLDAAFDGDYLFARSRGRSAPVKSFLMDQRIVVGVGNI 155 >gi|315445737|ref|YP_004078616.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] gi|315264040|gb|ADU00782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium sp. Spyr1] Length = 250 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 104/290 (35%), Gaps = 41/290 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L ++ + + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVYRTAAKLRDALEGRELIRCDIR-------VPRYAAVDLSGQVVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M G+++I + I L T R D Sbjct: 54 FIRV-GQASIHSHLKMDGAWVIGRVRVPTY-------KIRIVLE----TANSRASGVD-- 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 G +++++ + + + LGP+ ++A L LL+Q+++AG Sbjct: 100 -LGVLEVLDRATDME--AVEHLGPDLLGEDWSAEVAAANLVADPERPLAETLLDQRVMAG 156 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E + L P L D L + Q + ++ + ++ Sbjct: 157 VGNVFANELSFVFGLRPGTPVGELT-------DPLRVANRAQQMLWLNRLRVNRTTT--- 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G PC CG I R T++C CQ+ Sbjct: 207 -----GNTRPGQDVWVYGRAGLPC-RRCGTPIETDKNTERVTYWCPTCQR 250 >gi|58270184|ref|XP_572248.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57228506|gb|AAW44941.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 447 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 23/251 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K + L G ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 108 NT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D RR G + LV + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLV-SDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++Q AG+GN E L++A++ P +L + N + L +++ V Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQN------IRDLHHQLRAV 233 Query: 225 LIDAIDAGGSS 235 + AI S Sbjct: 234 PLTAISVNADS 244 >gi|311743597|ref|ZP_07717403.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] gi|311312727|gb|EFQ82638.1| endonuclease VIII [Aeromicrobium marinum DSM 15272] Length = 259 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 110/294 (37%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L V+ + L P ++ G ++ +V R K+L Sbjct: 1 MPEGDTVWRTAHHLHEVLAGRDLVTFDLR-------VPDFATSDLTGHRVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G+ ++ HL M G++ ++ + P H+ + T Y + Sbjct: 54 LTRI-GSFTLHTHLKMEGAWHVQPRGAG--WRRPAHSARAVLETTEHQAIGYSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 G ++LV + + LGP+ ++A + + ALL+Q+ +AG Sbjct: 105 --GVVELVPRDAEDTV--VGHLGPDLLGPDWDAAEAVRRLRTDPTRPVFLALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN YV E L+ A L+P R + L +L+ +++L S Sbjct: 161 LGNEYVNELLFTAGLAPTRPVSDVPD--------LPRLVARGRQMLDVNKARVERSFTG- 211 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY + PC CG I + R+TF+C +CQ Sbjct: 212 ------STRPGQERWVYSRERRPC-RRCGTRISQGSLGDDPVRQRNTFWCPHCQ 258 >gi|325963651|ref|YP_004241557.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323469738|gb|ADX73423.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 322 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 111/342 (32%), Gaps = 77/342 (22%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +RR + + RF +A G ++ K+L + Sbjct: 1 MPEGHSVRRLARQFGDVFGGRRLSVSSPQGRF---SAGAALLDGHRMTAADAHGKHLFLH 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSC-----------------------------------A 88 + L + VHLG+ G++ S A Sbjct: 58 FDNALVLHVHLGLYGAWSFGGDSTFTGSSSIGAPRRIGEQETFAAAADDDADGGGDAGYA 117 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD 148 P V ++ +N D R + + + L LGP+P Sbjct: 118 GPPAPVGAVRVRLAASNGW---------ADLRGATTCETITAAEADAV--LARLGPDPLR 166 Query: 149 N-SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 N +A + + L L++QKI+AG+GN+Y E L+R +L P + Sbjct: 167 NLRGDAGRFAANLQGRKAPLAALLMDQKIIAGVGNVYRAEVLFRRRLDPWLPGSDV---- 222 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIG------------------ 247 P+ +L +++ V+ D + G ++ Y G Sbjct: 223 --PEPAARRLWRDVVSVMNDGVSDGRIITTPPKYWSDHGKAAGRAGAARAAALPKSETYP 280 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 NA VY + G PC C + GR ++C CQ+ Sbjct: 281 ARDNAHFVYKRDGLPC-RVCRTTVLMSELVGRKLYWCPSCQQ 321 >gi|254552399|ref|ZP_05142846.1| endonuclease VIII nei [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 255 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 101/293 (34%), Gaps = 42/293 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAATLRRHLAGRTLTRCDIR-------VPRFAAVDLTGEVVDEVISRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I G SI HL M GS+ + + I L N + RV+ D Sbjct: 54 FIRT-GTASIHSHLQMDGSWRVGNRPVRVDH------RARIILEANQQEQAIRVVGVDLG 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 +D + LGP+ + ++ + + ALL+Q+++AG Sbjct: 107 LLEVIDRHNDGAV-----VAHLGPDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAG 161 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + + P ++ +D+L+ + AG Sbjct: 162 IGNVYCNELCFVSGVLPTAPVSAVADPRRLVTRARDMLWVNRFRCNRCTTGDTRAG---- 217 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+ C CG +I R ++C CQ+ Sbjct: 218 --------------RRLWVYGRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 255 >gi|326382819|ref|ZP_08204509.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] gi|326198409|gb|EGD55593.1| DNA-(apurinic or apyrimidinic site) lyase [Gordonia neofelifaecis NRRL B-59395] Length = 231 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 31/250 (12%) Query: 49 KIIDVSRRAKYLLIELEGNL--------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 K+L+ + + +HLG+ G+F E +P V Sbjct: 2 VFRRAEAWGKHLIHRYDDGRRGSAATRRIVHIHLGIYGTFREESLPMPEPT-----GQVR 56 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 + L + D R +L + + LGP+P + + Sbjct: 57 MRLIGTD-------LGVDLRGPNACELYTRDDLER--LVARLGPDPLRDDADPEVAWKAI 107 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + + + L++QK++AG+GNIY E L+RA + P R ++ + D ++ + Sbjct: 108 SRSRRPIGSLLMDQKVIAGVGNIYRAEVLFRAGVEPHRPGSAVTR------DEFDEMWAD 161 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + ++ + G + +G+ Y + VY + G+PC CG I G Sbjct: 162 LLHLMPIGVRRGHIHVVRPEDDNGAPAYASDRPRTYVYRRAGDPC-RLCGAPIAWEEMEG 220 Query: 279 RSTFYCTYCQ 288 R+ F+C CQ Sbjct: 221 RNLFWCPSCQ 230 >gi|199594598|gb|ACH90763.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ ++ + L R +LR+ P S G+ I V RRAKYLL++ + ++HLGM Sbjct: 1 HLEGRSIHGVILRRPDLRWPIPPEISEQLPGQAIEAVRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + +++++K L++Q IV G+GNI Sbjct: 109 ALLAGLGPEPLDDAFDGDYLFARSRGRSASVKTFLMDQGIVVGVGNI 155 >gi|315656363|ref|ZP_07909252.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492922|gb|EFU82524.1| DNA-formamidopyrimidine glycosylase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 342 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 107/348 (30%), Gaps = 68/348 (19%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + M+ + RF +A G+++ +V K+L + Sbjct: 1 MPEGHAIHRLVAQFAQVMSGEVVAASSPQGRFTAG---AAVLNGQRLTNVQAYGKHLFLG 57 Query: 64 LEGN---------------LSIIVHLGMSGSFIIEHTS---------------------- 86 + +HLG+ GS+ S Sbjct: 58 FAPRQVDTAQTTPDSKSPLTWLHIHLGIYGSWRFYGDSEFTSRHVGIALNLPESTQQTAE 117 Query: 87 -CAKPIKNP-------QHNHVTISLTNNTNTKKYRVIY-------------NDPRRFGFM 125 P+ H H Y D Sbjct: 118 IAEIPVHTEHDDSAFAPHEHFADRWFWTPAPFTAPPPYGTVRLRLVTAHGAADLSGPNTC 177 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 +L++ LGP+P + + + + ALL+Q ++AG+GNIY Sbjct: 178 ELLDVEGVAAV--FARLGPDPLRPDCDCGEFVKRCATRQKGIGEALLDQSVIAGVGNIYR 235 Query: 186 CEALWRAKLSPIRKTRSLI----QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 E L+ A+L+P R + + + L E ++ + D + + Sbjct: 236 AEVLYAARLNPFTPAREVSSRKLRRIWDWLEEYLPLGVESGRITTASPDDYAVFVERELA 295 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + VY + PCL C ++ + GR ++C CQ+ Sbjct: 296 AGREPQAIDSRYYVYQRQDRPCL-RCSATVKLRIAGGRKLYWCPRCQR 342 >gi|119962578|ref|YP_946580.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949437|gb|ABM08348.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 276 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 118/308 (38%), Gaps = 55/308 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + L + +T P + G + +V + K+L Sbjct: 1 MPEGDSIWRAATRLNEALAGKVITSSDFR-------VPRFATLNLSGWTMTEVVPKGKHL 53 Query: 61 LIELEGN-------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 L+ L G L+I HL M G+++I P H + T++ Sbjct: 54 LMRLAGPVDEEPGASRKPRALTIHSHLKMEGNWMIYPPGG--RWTKPGHTARCVLRTDSA 111 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSN 166 + + + G +++V T+ + + + LGP+ ++ + + Sbjct: 112 DAVGFSL--------GILEVVPTAEEDKI--VGHLGPDLLGPDWDEEEALRRLRAEPDVT 161 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + ALL+Q+ +AGIGNIY CEA + + + P + L K + + +++L Sbjct: 162 VGFALLDQRKLAGIGNIYRCEACFLSGIHPALPVGEVPD--------LAKTVNDAKRLLG 213 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RS 280 + + G + + + VYG+ +PC CG +RR + AG R Sbjct: 214 ENLGPGRRTTLG-------PRAMRPGYWVYGRERQPC-RRCGTTVRRGLLAGPDGTEERD 265 Query: 281 TFYCTYCQ 288 ++C CQ Sbjct: 266 IYFCPRCQ 273 >gi|134117608|ref|XP_772575.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255190|gb|EAL17928.1| hypothetical protein CNBL0530 [Cryptococcus neoformans var. neoformans B-3501A] Length = 447 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 23/251 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPELPEVE R+ + K + + ++ F + F+ G+ I R+ Sbjct: 1 MPELPEVERARKLIEDSCKGYKIASVDAQEDSIIFTGGTDHNEFAKEIAGRSITGCERKG 60 Query: 58 KYLLIELEG-NLSIIVHLGMSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNT 107 K + L G ++H GM+G ++ + + P+ + L Sbjct: 61 KTFWMTLSGEGRYPVMHFGMTGMIQLKGQEPTWYRRRPKESADVWPPRFYKFVLKLEPQE 120 Query: 108 NT---KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 + + + + D RR G + LV + +PP+ LG +P N T K Sbjct: 121 GSIADEPRELAFIDGRRLGRLRLV-SDPVSSHPPVSELGFDPILNHPTLEEFTKLLVNKK 179 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 +K +++Q AG+GN E L++A++ P +L + N + L +++ V Sbjct: 180 GTVKGVIMDQAFSAGVGNWVADEVLYQARIHPSCPIPALSEQN------IRDLHHQLRAV 233 Query: 225 LIDAIDAGGSS 235 + AI S Sbjct: 234 PLTAISVNADS 244 >gi|148272640|ref|YP_001222201.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830570|emb|CAN01505.1| putative formamidopyrimidine-DNA glycosylase involved in DNA repair [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 329 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 121/343 (35%), Gaps = 70/343 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I + + RF +A G++++ K + Sbjct: 1 MPEGHSIHRIAKQFEAHFVGDV---VQASSPQGRF---AEGAAVLDGRRLVAARAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSF-------------------------IIEHTSCAKPIKN-- 93 +E +G++ + VHLG+ G++ + ++ Sbjct: 55 FLEFDGDVWLRVHLGLYGAWDFAGDVSTLNRMGQNGMRGDVPVDDRVGDAPVDSDAEDSL 114 Query: 94 -----PQHNHVTISLTNNTNTKKYRVIY------------------NDPRRFGFMDLVET 130 P+ + ++ + + D R + Sbjct: 115 ASIGAPRRARLRMAEQEKVHDPFSAEAWPPEPVGQVRVRLLTEHAVADLRGPTACVVASP 174 Query: 131 SLKYQYPPLRTLGPEPADNSF--NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 Q + LGP+P + + T KK + + L++Q +V+GIGN+Y E Sbjct: 175 EEVQQ--AIDKLGPDPLVDGGKRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAEL 232 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI---DGS 245 L+RA+ +P R + P+D++ L ++ K+L ++ G D + D + Sbjct: 233 LFRARQNPHTPGRDV------PEDVVRGLWKDWSKLLRKGVEVGQMMTMDGLRGKRLDAA 286 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG I AGR ++C YCQ Sbjct: 287 LRNRADRHWVYHREGLPC-RVCGTNIVMEEAAGRKLYWCPYCQ 328 >gi|301318234|gb|ADK67032.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas terrae] Length = 155 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 + + + + L R +LR+ P G++I + RRAKYLL++ E + ++HLGM Sbjct: 1 HLVDRRIHGVILRRPDLRWPIPAEIEQLLPGQRIEAIRRRAKYLLLDTELGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL + + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLEDGR-----LLRFNDPRRFG--SLLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LR LGPEP D F+ YL + + + +K L++Q IV G+GNI Sbjct: 109 ELLRDLGPEPLDADFDGDYLFQRSRGRKAPIKTFLMDQGIVVGVGNI 155 >gi|134101245|ref|YP_001106906.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|291007765|ref|ZP_06565738.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133913868|emb|CAM03981.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 258 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 79/294 (26%), Positives = 119/294 (40%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+VE RR + V D+ + + RG+ + + R K+L Sbjct: 1 MPELPDVEGFRRVAAEAAR-QRVRDVEVFDPQVVRG----LVEQVRGRYLGEARRHGKWL 55 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 ++ + ++VH GM+G + C H+ V + LT + + Sbjct: 56 VLPTSSRDGDDPPWLLVHFGMTGMLL----RCPPGEDVHAHDRVVLHLTRDD------LR 105 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQK 175 Y D R+ M +V S + L LGP+ A + LK+AL++Q Sbjct: 106 YRDMRKLKGMRVVRRSEVDGF--LDELGPDAAAVPL--PDFRACVGRGRRALKSALMDQS 161 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAG+GN+ V E LWRA+L P T L D L + ++ VL A AG Sbjct: 162 TVAGLGNLCVDEILWRARLDPKTPTTELDG------DRWRSLHRTMRSVLRQAERAGRVP 215 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 R G+ + GE C C +RR AGR+T +C CQ+ Sbjct: 216 DR----PSWLTGHRDDP-------GERC-PRCSGTLRRAKVAGRTTVWCPACQR 257 >gi|256832180|ref|YP_003160907.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] gi|256685711|gb|ACV08604.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Jonesia denitrificans DSM 20603] Length = 343 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 111/341 (32%), Gaps = 62/341 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V T + + RF +A G +++ K+L Sbjct: 1 MPEGHTVHRLARTFANVFGGHT---VHVTSPQGRF---EQGAALLNGAQLVHAQAYGKHL 54 Query: 61 LIEL-----------------EGNLSIIVHLGMSGSFIIEHTSCAK-------------- 89 + E + VHLG+ GS+ Sbjct: 55 FLGFTPTPNKTNVTHTDEPPPESLRWLRVHLGLYGSWTFAAHPNTPIAHAIGAPRRRIGE 114 Query: 90 ------PIKNPQHNHVTISLTNNTNTKKYRVIYN--DPRRFGFMDLVETSLKYQYPPLRT 141 P + H+ TI + + D +++ + + Sbjct: 115 REHNLTPDQPEPHDTWTIPEPRGQVRVRIATAHAVADLTGPTACEVLTYEQTRHH--INQ 172 Query: 142 LGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTR 201 LGP+P + + ++ S + L+NQK +AG+GNIY EAL+RA+LSP Sbjct: 173 LGPDPIRDDADPQRFLTAVNRSRSAIGGLLMNQKTIAGVGNIYRAEALFRARLSPYTPGN 232 Query: 202 SLIQN--NGTPKDILYKLIQ------------EIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 ++ + D++ + Q + A + S R Sbjct: 233 TIPTHTLTALWNDLVTLMRQGAHTGAIVTTHSADRNTTPPAPNNPRSRTRQNTDHTPDAI 292 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 AF VY + G+PC CG I R ++C CQ Sbjct: 293 PTDQAFYVYQRHGQPC-RRCGTPIALADMQARKLYWCPTCQ 332 >gi|199594630|gb|ACH90779.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594646|gb|ACH90787.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594584|gb|ACH90756.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594602|gb|ACH90765.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594614|gb|ACH90771.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594642|gb|ACH90785.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594652|gb|ACH90790.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + T + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFGSLLWQPTGEV--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|326800630|ref|YP_004318449.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] gi|326551394|gb|ADZ79779.1| DNA-formamidopyrimidine glycosylase [Sphingobacterium sp. 21] Length = 258 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 112/283 (39%), Gaps = 33/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ RNL ++K + I +H A + +++ V R K L Sbjct: 1 MPELPDLEVFSRNLTRILKGKKLERIHVHEHKKVSVPEKELKEALKKRELKKVYRLGKQL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + N + +HL + G + + +NP++ +++ K + D + Sbjct: 61 YFDFGKNALLSLHLMLHGKLVYTNE------ENPKYALLSLKFE-----KAQTLFITDFQ 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 + + L + + +A L + +K L++Q I+ GI Sbjct: 110 KMAHIQLNPKRTASV---------DALSDDLHAERLYMILQNSKATIKTLLMDQHIIGGI 160 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AK++P + PK+ + +L++ I++VL+ A D + Sbjct: 161 GNAYADEILWEAKIAPQSIANKI------PKEKVSELVESIKEVLLQAEKMILKEHPDII 214 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 G I F V K G IR GR+T++ Sbjct: 215 S--GEIRDFMKVHRVKAKED-----PQGNPIRTEKIGGRTTYF 250 >gi|86160345|ref|YP_467130.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776856|gb|ABC83693.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-C] Length = 320 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ L + + I L L + A G+++ V R+ K + Sbjct: 1 MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEA-EGRRVAAVRRQGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ L+G+L + +HL ++G + P K N T + + Sbjct: 60 VLALDGDLFLALHLMIAGRLHWKDPGARLPGKAGL---AAFDFPNGT----LVLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + LV + L G EP ++N LK AL + + +GI Sbjct: 113 RRAALHLVRGAAALA--ALDRGGLEPLGAD--LAAFAAALRRENHTLKRALTDPSLFSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L RA+LSP+ T L + +L++ ++VL + Sbjct: 169 GNAYSDEILHRARLSPVALTSRLGDAE------VARLLEATREVLAGWTARLREAAGS-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+G+ +PC CG ++RIV+A YC CQ Sbjct: 221 GFPEGVTAFREGMAVHGRHRQPC-PVCGTAVQRIVRAENEVNYCPRCQ 267 >gi|225629675|ref|ZP_03787657.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591470|gb|EEH12528.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 159 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 7/156 (4%) Query: 133 KYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 + + G EP + F+ YL K N+K+AL++ K + G+GNIY E+L+RA Sbjct: 10 EQETDFFSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGVGNIYASESLFRA 69 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 ++SP+R ++L KL EI+ L DAI AGGS+L+DY GS GYFQN Sbjct: 70 RISPLRSAKNLTYRE------CEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSAGYFQNN 123 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F VYGK +PC C +I I Q GRST++C CQ Sbjct: 124 FYVYGKVQKPC-KICNNIITLIRQNGRSTYFCNACQ 158 >gi|199594610|gb|ACH90769.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P A G+ I V RRAKYLL++ +++ HLGM Sbjct: 1 HLEGRRVHGVILRRPDLRWPIPDEIGALLPGQAIEGVRRRAKYLLLDTAIGSALL-HLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGETH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L LGPEP D++F+ YL + + + +K L++Q IV G+GNI Sbjct: 109 ELLAGLGPEPLDDAFDGDYLFQRSRGRKAPVKTFLMDQGIVVGVGNI 155 >gi|199594536|gb|ACH90732.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594540|gb|ACH90734.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594544|gb|ACH90736.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594546|gb|ACH90737.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594548|gb|ACH90738.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594550|gb|ACH90739.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594556|gb|ACH90742.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594558|gb|ACH90743.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594562|gb|ACH90745.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594564|gb|ACH90746.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594568|gb|ACH90748.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594570|gb|ACH90749.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594572|gb|ACH90750.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594574|gb|ACH90751.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594576|gb|ACH90752.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594580|gb|ACH90754.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594582|gb|ACH90755.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594648|gb|ACH90788.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594654|gb|ACH90791.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594656|gb|ACH90792.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594658|gb|ACH90793.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594662|gb|ACH90795.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594664|gb|ACH90796.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318226|gb|ADK67028.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas sp. DSM 2408] gi|301318228|gb|ADK67029.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas rhizophila] gi|301318230|gb|ADK67030.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas koreensis] gi|301318236|gb|ADK67033.1| DNA-formamidopyrimidine glycosylase [Pseudoxanthomonas dokdonensis] gi|301318240|gb|ADK67035.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318242|gb|ADK67036.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318244|gb|ADK67037.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318246|gb|ADK67038.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318250|gb|ADK67040.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318254|gb|ADK67042.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318256|gb|ADK67043.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318258|gb|ADK67044.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318262|gb|ADK67046.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318264|gb|ADK67047.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318266|gb|ADK67048.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas chelatiphaga] Length = 155 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|325526895|gb|EGD04368.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 171 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PEVE+ RR + + V + + LR+ P + R ++++ V RR KYLL E Sbjct: 1 MPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYLLFE 60 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ IVHLGM+G+ + + +H+H+ + + + DPRRFG Sbjct: 61 IDAGWF-IVHLGMTGTLRVLPAAGVP--VAAKHDHIDWIFDE------FVLRFRDPRRFG 111 Query: 124 FMDLV--ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 + E + +P L +LG EP +F+ L + + ++K ALL IV G+G Sbjct: 112 AVLWHPREAGDVHAHPLLASLGVEPFSPAFSGALLHARTRGRTVSVKQALLAGDIVVGVG 171 >gi|288922642|ref|ZP_06416818.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] gi|288346000|gb|EFC80353.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Frankia sp. EUN1f] Length = 317 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 35/274 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L ++ + P +A RG+++++V R K+L Sbjct: 1 MPEGDTVWLTARRLDAALRGQPLLRSDFR-------VPSLATADLRGREVLEVCARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ ++G L++ HL M GS+ + ++ P + +T YR+ D Sbjct: 54 LLRVDGGLTLHTHLRMEGSWHLYRPG-SRWAGGPAWQIRVVLVTGEQVAVGYRLPVVD-- 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAG 179 L+ T+ + + + LGP+ ++ + + + ALL+Q+++AG Sbjct: 111 ------LLPTASEDRV--VGHLGPDVLGADWDLDRAVANLLADPAREIGVALLDQRLLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI+ EA + A +SP + + + + + AG R Sbjct: 163 LGNIWRTEACFLAGVSPWTPVGEVRD------------LPGLVRRAQAMVRAGA---RGG 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 + VYG+ G PC CG ++RR Sbjct: 208 HQVTTGSARPGEQHWVYGRAGRPC-RRCGTLVRR 240 >gi|119962666|ref|YP_948118.1| formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] gi|119949525|gb|ABM08436.1| putative formamidopyrimidine-DNA glycosylase [Arthrobacter aurescens TC1] Length = 295 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 104/307 (33%), Gaps = 32/307 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + + RF G ++D + K L Sbjct: 1 MPEGHSVHRLARQFQDVFGGRPL---DVSSPQGRFAAGAEL---LTGHIMVDAAAHGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY-------- 112 + + L + VHLG+ G++ S + + + Sbjct: 55 FLRFDHQLFLHVHLGLYGAWSFGGDSSFTGASSIGAPRRIGERESGSAADDGEYSGPPAP 114 Query: 113 --RVIYNDPRRFGFMDLV------ETSLKYQYPPLRTLGPEPADNSF-NAIYLTHQFHKK 163 V G+ DL + L LGP+P N + + ++ Sbjct: 115 VGAVRVRLVSDHGWADLRGATTCAAITSAEAAAVLDRLGPDPLHNRPGDRDEFIRRLRRR 174 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + + +++Q ++AG+GNIY E L+R + P S+ + +L + Sbjct: 175 KTAVALLMMDQSVLAGVGNIYRAEVLFRQAVDPWTPGSSID------VETAGRLWDDTVD 228 Query: 224 VLIDAIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + D + G ++ G+ +A VY + G PC CG ++ R Sbjct: 229 TMSDGVRDGRIVTTPSTLWTGGGAAAPDADAHFVYKRDGMPC-RACGTLVGMTEIGARKL 287 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 288 YWCPGCQ 294 >gi|199594588|gb|ACH90758.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594592|gb|ACH90760.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594600|gb|ACH90764.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594620|gb|ACH90774.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594624|gb|ACH90776.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594644|gb|ACH90786.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594650|gb|ACH90789.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594566|gb|ACH90747.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV IS+ N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISMDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594638|gb|ACH90783.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGRQLR-----FNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|262201744|ref|YP_003272952.1| formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia bronchialis DSM 43247] gi|262085091|gb|ACY21059.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Gordonia bronchialis DSM 43247] Length = 261 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 107/299 (35%), Gaps = 48/299 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + + G + V R K+L Sbjct: 1 MPEGDTVYAAADRLRRALAGQVLTYCQFR-------VPRYATVDFAGHTVTGVRSRGKHL 53 Query: 61 LIELEGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 LI+L SI HL M G++ + A+ + H + + + Sbjct: 54 LIDLADPQGNRAPSIHSHLKMEGAWHVHRVG-ARWRRPGHHARIVLRTSTYEAVGF---- 108 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQ 174 G +DL++ L LGP+ + ++A + + + + ALL+Q Sbjct: 109 -----ELGILDLLDDPDAA----LSYLGPDLLGDDWDAEEAIRRIRARPAEAIGLALLDQ 159 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++AG+GN++ CE + + P + + +++ +K+L + Sbjct: 160 RLMAGVGNVFRCEICYLRGVLPTTPVADVD---------VPGMVETSRKLLWNNRTRTAR 210 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQK 289 S + VYG+ G+ C C +I R R ++C CQ+ Sbjct: 211 STTGQTAPNART-------WVYGRRGQLC-RRCATLIERGFLGDEGTERVIYFCPTCQR 261 >gi|199594604|gb|ACH90766.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I DV RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDVRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594628|gb|ACH90778.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|86158513|ref|YP_465298.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Anaeromyxobacter dehalogenans 2CP-C] gi|85775024|gb|ABC81861.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Anaeromyxobacter dehalogenans 2CP-C] Length = 278 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 91/249 (36%), Gaps = 17/249 (6%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 A G+ + V K+LL+ G L + HL M+GS+ + P + P + Sbjct: 40 APVAGRTVERVESVGKHLLLHFSGGLVLRTHLRMNGSWHLYRPGA--PWRRPASAMRVLV 97 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + + + + + + + P L LGP+ +F+ + Sbjct: 98 EVPDAVAVAFELPVA--------EWIRAADLGRAPALARLGPDLLSPAFDQAEAERRLRA 149 Query: 163 KNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + + +AL++Q +AG GN E L+ A +SP R+ L + + Sbjct: 150 RGALAVADALVDQGALAGAGNELKSEILFVAGVSPFRRVEDLADAELRAVIATARRLIA- 208 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GR 279 + GG + VYG+ G PC CG I Q + Sbjct: 209 --ENVPPPGPGGVETWRGGRRTTRRMNPRERAWVYGRGGRPC-RRCGAPIAFARQGPHAQ 265 Query: 280 STFYCTYCQ 288 +T++C CQ Sbjct: 266 ATWWCPRCQ 274 >gi|227354783|ref|ZP_03839200.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165101|gb|EEI49932.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 160 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + + + LR+ + I+ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGNILHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIEL IIVHLGMSGS I + +H+H+ + + + Y DPR Sbjct: 60 LIELNQG-WIIVHLGMSGSVRI----LPEEQPEEKHDHIDLVFRDGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 RFG E L LGPEP FNA YL Q K Sbjct: 110 RFGAWLWCED--LATSSVLAHLGPEPLSAQFNAQYLYQQSKNKK 151 >gi|199594636|gb|ACH90782.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594668|gb|ACH90798.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594670|gb|ACH90799.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPLRT----HDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDETFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594554|gb|ACH90741.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594626|gb|ACH90777.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFSRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|170781889|ref|YP_001710221.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169156457|emb|CAQ01605.1| putative formamidopyrimidine-DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 329 Score = 161 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 118/343 (34%), Gaps = 70/343 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I + + RF +A G++++ K + Sbjct: 1 MPEGHSIHRIAKQFEAHFVGDV---VQASSPQGRF---AEGAAVLDGRRLLAAKAVGKQM 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT--------------------------------SCA 88 +E +G++ + VHLG+ G++ Sbjct: 55 FLEFDGDVWLRVHLGLYGAWDFAGDVTTLNRMGQNGMRGDVPVDDRVDDAPVDAAAEDSL 114 Query: 89 KPIKNPQHNHVTISLTNNTNTKKYRVIY------------------NDPRRFGFMDLVET 130 I P+ + ++ + + D R + Sbjct: 115 ASIGAPRRARLRMAEQEKVHDPFSAEAWPPEPVGQVRVRLLTERAVADLRGPTACVVASP 174 Query: 131 SLKYQYPPLRTLGPEPADNSFN--AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 Q + LGP+P + T KK + + L++Q +V+GIGN+Y E Sbjct: 175 DEVQQ--AIDKLGPDPLVDGGTRSEDRFTATVRKKPTAIGLLLMDQAVVSGIGNVYRAEL 232 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI---DGS 245 L+RA+ +P R + P+D++ L ++ K+L ++ G D + D + Sbjct: 233 LFRARQNPHTPGRDV------PEDVVRGLWRDWSKLLRKGVEVGQMMTMDGLRGKKLDAA 286 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G PC CG + AGR ++C YCQ Sbjct: 287 LRNRADRHWVYHREGLPC-RVCGTNVVMEEAAGRKLYWCPYCQ 328 >gi|199594586|gb|ACH90757.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594606|gb|ACH90767.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594634|gb|ACH90781.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|72382399|ref|YP_291754.1| endonuclease VIII [Prochlorococcus marinus str. NATL2A] gi|72002249|gb|AAZ58051.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Prochlorococcus marinus str. NATL2A] Length = 281 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 112/294 (38%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + V+ + + + + ++ + + I D++ R K + Sbjct: 1 MPEGPEIRRAADKISKVLIGEEIIESNFYYERIK-----EKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + N S+ H + G + + + + + TN R+ Sbjct: 56 LIRFKNNWSMYSHNQLYGRWTVNLNTTKVKS------RRALRVVFTTNKHAVRLWSA--- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK---NALLNQKIV 177 +DL+ T + ++ L+ +GP+ S + + + + + K +L+Q Sbjct: 107 --TDIDLIPTDEENEHSFLKKIGPDVLSESCSLDLIEERLTSTSFHKKKASTLMLDQAFF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GN E L+ AK+ P + L K + + + I+ + A GG ++ Sbjct: 165 AGLGNYLRSEILFDAKIHPDDRPFDLD------KTKITQWAKSIKNISQLAYKTGGFTVS 218 Query: 237 RDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G + +V+ + CL NC I R R YC CQ Sbjct: 219 KSLADRNKENGEPRRSYRHAVFMRHQYECL-NCKDRIERKWYGKRKVDYCPSCQ 271 >gi|199594612|gb|ACH90770.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL+E + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVTELLPGQRIEDIRRRAKYLLLETAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594596|gb|ACH90762.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFDRSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|229821095|ref|YP_002882621.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229567008|gb|ACQ80859.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 307 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 102/319 (31%), Gaps = 47/319 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R T + + RF + G++++ K L + Sbjct: 1 MPEGHSIHRLARAFADGFTGQVVRVSSPQGRF---ERGAELLDGRRLVATDAWGKQLFLG 57 Query: 64 L-------EGN-----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT------- 104 + L + VHLGM G++ + V I+ Sbjct: 58 FAPAEAPEDAGADPATLWLRVHLGMYGAWTFAGDAQFTGPHAIGAPRVRIAEEETAVADD 117 Query: 105 --------NNTNTKKYRVIYNDPRRFGFMDLVET------SLKYQYPPLRTLGPEPADNS 150 + V G DL LGP+P Sbjct: 118 GEPSPAGEWRVPPPRGAVRARIVGDHGVADLTGPMACEVLDGAAAAREQARLGPDPLRPD 177 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + S + L +Q ++AGIGNI+ E L+R+++ P R + Sbjct: 178 ADREVYVRAVRSSPSPVGVLLTDQTVIAGIGNIFRAELLFRSRIYPRRPGARVSAV---- 233 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 L ++ E +++ A D+G D + + VY + G+ CL CG Sbjct: 234 --KLRRVWDEAVELMSAAADSGRIVTTDAADRTAA----DERWYVYHRDGQDCL-RCGWT 286 Query: 271 IRRIVQAGRSTFYCTYCQK 289 +R A R ++C CQ+ Sbjct: 287 VRAYELATRRVYWCPNCQR 305 >gi|256425446|ref|YP_003126099.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] gi|256040354|gb|ACU63898.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] Length = 259 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 99/285 (34%), Gaps = 36/285 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ NL + + I L D P F A G+ + V R K L Sbjct: 1 MPELPDLQVFSHNLDKALSGKKLKVIKLENTKKAKDTPAAFKKALEGETLESVYREGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HL + G +H + + + + D + Sbjct: 61 RFRFKNEAVLGMHLMLHGKLYYFEEENTN-----KHTVIALLFEDGKG-----LALTDFQ 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L + P+ F +L Q KK + +K LL+Q I+ GI Sbjct: 111 GAAVPSLNPEAAA---------APDALSKEFTLTFLKEQLAKKKTAVKKILLDQHIIRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A +SP + P + L I VL +A Sbjct: 162 GNAYADEILWEAGISPFSIANKI------PATKVKALHAAIHNVLKEAEKQIRKE----- 210 Query: 241 HIDGSIGYFQNAFSVYG--KTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ ++ KT P G +I + R T+Y Sbjct: 211 HPDIIAGEIRDFMKIHQPKKTHSP----TGGVIEQQELNSRKTYY 251 >gi|289705671|ref|ZP_06502056.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557619|gb|EFD50925.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 303 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 107/316 (33%), Gaps = 42/316 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + RF +A G+ + K+ Sbjct: 1 MPEGHSVHRLARQFTDVFGGRRIRA---TSPQGRF---AEGAALLDGQVLERARAHGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + VHLGM G++ + + + D Sbjct: 55 FADVSGGRVLHVHLGMYGAWTFGGDQDFVAASSIGAPRRVGEREVHDDGAPAAEPARDAD 114 Query: 121 RF------------------GFMDLVETSLKYQYPP------LRTLGPEPADNSFNAIYL 156 + G+ DL+ S P + LGP+P ++ + Sbjct: 115 GWVQPPPAASTVRLRLRSEHGWADLIGASRCRALTPAEAAEVVAGLGPDPLNDD-DPAPF 173 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + L++Q V+GIGNI+ EAL+RA + P R R + ++ L Sbjct: 174 YAAARRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSASD------LAF 227 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCG-QMIR 272 L + ++ + + G H G + ++A VY + G CL CG + I Sbjct: 228 LWADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACL-VCGRETIV 286 Query: 273 RIVQAGRSTFYCTYCQ 288 A R + C CQ Sbjct: 287 VEEMAARKLYRCLTCQ 302 >gi|220911527|ref|YP_002486836.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] gi|219858405|gb|ACL38747.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Arthrobacter chlorophenolicus A6] Length = 276 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 106/299 (35%), Gaps = 38/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + T+T P + G + +V R K+L Sbjct: 1 MPEGDSVWRAARQLHEALAGQTLTASDFR-------VPRFATLNLTGWTVAEVVPRGKHL 53 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ ++G L+I HL M G++ + + + K + T Sbjct: 54 LMRVKGPGDKALTIHSHLKMEGTWQV-YPPGGRWRKPGFTARCVLRTTAADAVGFS---- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQK 175 G +++V T+ + + LGP+ ++ + + + A+L+Q Sbjct: 109 -----LGILEVVATANEDSI--VGFLGPDLLGPDWDLDEAERRLRARPEVPIGVAILDQS 161 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AGIGNIY CEA + + + P + D +L++ Sbjct: 162 NLAGIGNIYRCEACFLSGVHPATPVSKVADLRTLMTDA-KQLLEANLGPGRRVTILNARG 220 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA------GRSTFYCTYCQ 288 + + G GY VY + CL CG +RR + R ++C CQ Sbjct: 221 MP-VGRMAGRPGY-----WVYRRDQHACLK-CGTPVRRGLLGKLNGEEERDIYFCPRCQ 272 >gi|199594594|gb|ACH90761.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLRGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594632|gb|ACH90780.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|295669486|ref|XP_002795291.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] gi|226285225|gb|EEH40791.1| ATFPG-1/ATFPG-2/ATMMH-1/ATMMH-2/FPG-1/FPG-2 [Paracoccidioides brasiliensis Pb01] Length = 369 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 108/308 (35%), Gaps = 46/308 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EV + + + T+T + + + F F GK I+D ++ Sbjct: 1 MPELAEVARVVHYIRKYLVGKTITKVHVQDDPIVFGKVGTTAAEFQKHMEGKSIVDTGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEH-----------TSCAKPIKNPQHNHVTISLTN 105 KY + + ++H GM+G +++ + P + + Sbjct: 61 GKYFWMIMSSPPHPVMHFGMTGWLKLKNVHTYYYRAPASDKGNDRGEEPWPSKFWKFMLE 120 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP--ADNSFNAIYLTHQFH 161 + K + D RR G + LV+ +Y PL+ GP+P + +L + Sbjct: 121 LDDEPKTEAAFVDARRLGRVRLVDCPGADIRKYSPLKENGPDPIVDKDIVTLDWLRKKVL 180 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 K +K LL+Q ++GIGN + + +L I Sbjct: 181 SKRVPIKALLLDQTNISGIGNWMGN---------------------TLQESQIEQLYSAI 219 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 V ++ G+S + F + +S GKT G+ I I GR++ Sbjct: 220 NYVCSTSVGLLGNSEEFPSNWL-----FSHRWS-KGKTNHSHKLPNGEKIVFITVGGRTS 273 Query: 282 FYCTYCQK 289 QK Sbjct: 274 AIVPAIQK 281 >gi|124026034|ref|YP_001015150.1| endonuclease VIII [Prochlorococcus marinus str. NATL1A] gi|123961102|gb|ABM75885.1| Formamidopyrimidine-DNA glycosylase [Prochlorococcus marinus str. NATL1A] Length = 281 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 115/294 (39%), Gaps = 29/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE++ + V+ + + + + ++ + + I D++ R K + Sbjct: 1 MPEGPEIKRAADRISKVLIGEEIIESNFYYERIK-----EKEEIVKNQNIKDITTRGKAM 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +I + + S+ H + G + + + + + TN R+ Sbjct: 56 IIRFKNDWSMYSHNQLYGRWTVNLNTTKVKS------RRALRVVFTTNKHAVRLWSA--- 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK---NALLNQKIV 177 +DL+ T+ + ++ L+ +GP+ + S + + + K + K +L+Q + Sbjct: 107 --TDIDLIPTNEENEHSFLKKIGPDILNESCSLDLIEERLTSKRFHKKKASTLMLDQTVF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL- 236 AG+GN E L+ AK+ P + L + T + I+ + A GG ++ Sbjct: 165 AGLGNYLRSEILFDAKIHPDDRPFDLDKTRITQWA------KSIKNISQLAYKTGGFTVS 218 Query: 237 RDYVHIDGSIGYFQN--AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G + +V+ + CL NC I R R YC CQ Sbjct: 219 KSLADRNKENGEPRRSYRHAVFMRHQYECL-NCKDRIERKWYGKRKVDYCPSCQ 271 >gi|50955599|ref|YP_062887.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952081|gb|AAT89782.1| DNA glycosylase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 261 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 111/297 (37%), Gaps = 46/297 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + + G+++ +V R K+L Sbjct: 1 MPEGDTVYQAADRLRRALAGRVLTATDFR-------VPAYATVDLSGQRVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G S+ HL M GS+ + ++P H + T + + Sbjct: 54 LIRV-GGHSVHSHLKMDGSWEVYPPGG--RWRHPAHQARVVLRTAEGEAVGFLL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKI 176 G +DL+ + + + LGP D ++A + + + ALL+Q+ Sbjct: 105 --GTLDLLPREREDE--AVDDLGPNLLDPGWDAASAAEAVRRLRERPGAPVAVALLDQRA 160 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN+Y E + + P R R + D+ ++L+ + + G + Sbjct: 161 LAGIGNVYANELCFLRGMLPTRPVRE--ADIPAAVDLAHRLLAANRDRSVRVTT--GDTR 216 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 R VYG+ G+PC CG IRR R T +C CQ Sbjct: 217 RGRTT------------WVYGRQGQPC-RRCGTPIRRGRLGYTELTERVTSFCPVCQ 260 >gi|199594608|gb|ACH90768.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318248|gb|ADK67039.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318260|gb|ADK67045.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGSYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens] Length = 268 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 27/247 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 M ELPEVE +R + T+ + D P GKKI+ R K Sbjct: 1 MAELPEVEAAKRLVNCHCLGATIVKAIVDNDTKVIDGVTPAVLQETLTGKKIVSALREGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ-----------HNHVTISLTNNT 107 ++ ++L+ S +FI++ ++ ++P+ H+ V + L N Sbjct: 61 HIWLQLDSRPWPSYQFDTSSAFIVKGAKGSQ-YRSPKVSDEEEAFPTTHSKVLLQLDNG- 118 Query: 108 NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 V + D RFG + L++ PP+ LG + NA T K ++ Sbjct: 119 ----VEVAFTDKLRFGRVRLLDNPSIA--PPISELGFDAYLELPNAEQFTEALKTKKGSV 172 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q ++GIGN E L++AK+ P + SL + + KL I++VL Sbjct: 173 KALLLDQSFLSGIGNWVGDEVLFQAKIHPEQSVNSLTEEQ------VAKLHTAIREVLDK 226 Query: 228 AIDAGGS 234 A+ G Sbjct: 227 AVSVDGD 233 >gi|199594532|gb|ACH90730.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594534|gb|ACH90731.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594538|gb|ACH90733.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594542|gb|ACH90735.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594622|gb|ACH90775.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEGFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|199594660|gb|ACH90794.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|199594666|gb|ACH90797.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] gi|301318252|gb|ADK67041.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I V RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAGQLPGQRIDAVRRRAKYLLLDTAAGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGNYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|253702038|ref|YP_003023227.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] gi|251776888|gb|ACT19469.1| DNA-formamidopyrimidine glycosylase [Geobacter sp. M21] Length = 261 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 32/284 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLAVYAENLARKLTGKKIKTVSFHDRGRLNVAPDELSAALTGAKVAAVRRTGKQI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ ++ P V+I+ ++ + + +DP+ Sbjct: 61 SFQADNGAVLRVHLMLTGGFVLTMAEQLDRLEAPV---VSITFSDGS-----ALAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 + + L + P+ + +A L KK + +K LL+Q ++ G Sbjct: 113 GWATLALNPQPDREA--------PDALE--LSADQLQQLCAKKPKTLIKALLLDQALIGG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A++SP L P + + L + I VL DAI Sbjct: 163 IGNAYADEILWEARISPKSAAGKL------PPEAVSALARAIPAVLKDAILELRK----- 211 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G S G + + + + T+Y Sbjct: 212 RHPDMVAGEYREFLKVH-RPGLK-QSPTGAAVIKENISSKQTYY 253 >gi|226326882|ref|ZP_03802400.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] gi|225204719|gb|EEG87073.1| hypothetical protein PROPEN_00742 [Proteus penneri ATCC 35198] Length = 164 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 79/178 (44%), Gaps = 19/178 (10%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PELPEVE RR + + + + LR+ + I+ V RRAKYLL Sbjct: 6 PELPEVETSRRGIEPHLVGNVLHYAIVRNSKLRWPVSEKIKTLL-DEPILSVKRRAKYLL 64 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +EL II+HLGMSGS I + +H+H+ + + + Y DPRR Sbjct: 65 VELNTG-WIIIHLGMSGSVRI----LLEEQPEEKHDHIDLVFRDGKVLR-----YTDPRR 114 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 FG E L LGPEP + FNA YL Q K ++ +Q +V G Sbjct: 115 FGAWLWCED--LATSTVLAHLGPEPLSDEFNAEYLYQQSKNKKNS------HQTVVNG 164 >gi|301318238|gb|ADK67034.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGQI--H 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|281414015|ref|ZP_06245757.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 303 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 105/316 (33%), Gaps = 42/316 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V + RF +A G+ + K+ Sbjct: 1 MPEGHSVHRLARQFTDVFGGRRIRA---TSPQGRF---AEGAALLDGQVLERARAHGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + VHLGM G++ + + + D Sbjct: 55 FADVSGGHVLHVHLGMYGAWTFGGDQDFAAASSIGAPRRIGEREVHDDGAPAAEPCRDAD 114 Query: 121 RF------------------GFMDLV------ETSLKYQYPPLRTLGPEPADNSFNAIYL 156 + G+ DL+ + + LGP+P ++ + Sbjct: 115 GWVQPPSPAATVRLRLRAEHGWADLIGASRCRALTPAEAADVVAGLGPDPLNDD-DPAPF 173 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + + L++Q V+GIGNI+ EAL+RA + P R R + + L Sbjct: 174 YDLARRTRRPIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSAPD------LES 227 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCG-QMIR 272 L + ++ + + G H G + ++A VY + G CL CG + I Sbjct: 228 LWADNAALMREGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACL-VCGREAIV 286 Query: 273 RIVQAGRSTFYCTYCQ 288 A R + C CQ Sbjct: 287 VEEMAARKLYRCLTCQ 302 >gi|254391826|ref|ZP_05007021.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] gi|197705508|gb|EDY51320.1| DNA glycosylase [Streptomyces clavuligerus ATCC 27064] Length = 240 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 31/257 (12%) Query: 38 PHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHN 97 P + +A G++++ R K+ L EG L++ HL M G++ + +P P+H Sbjct: 4 PRYETADLTGRRVLKEVPRGKHKLARFEGGLTLHSHLRMDGAWRVFPAG-ERPRGGPEHQ 62 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + T++ YR+ ++L+ T+ + + + LGP+ ++ Sbjct: 63 IRAVLGTSSHTAVGYRL--------PVLELLRTTDEQKV--VGHLGPDLLGPDWDPAAAR 112 Query: 158 HQ-FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILY 215 + + L ALL+Q+ +AGIGN+Y CE + A ++P L + + Sbjct: 113 ERLLADPSRPLGEALLDQRNLAGIGNVYKCELAFLAGVTPWLPVGELPEGVLERLLATAH 172 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L++E + + A GS + V+G+ G PC CG +RR Sbjct: 173 RLLEENRDAVERRTTAAGS-------------RAGSRLHVHGRAGRPC-PRCGTPVRRSG 218 Query: 276 QA----GRSTFYCTYCQ 288 R +++C CQ Sbjct: 219 PGRAGDERISYWCPGCQ 235 >gi|312886552|ref|ZP_07746160.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] gi|311300955|gb|EFQ78016.1| DNA-formamidopyrimidine glycosylase [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 112/283 (39%), Gaps = 34/283 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ RNL +K T+ + + A G+ + +V R K L Sbjct: 1 MPELPDLQVFSRNLTKALKGKTLAKVHVLNHKKLNVPVKELQEAIEGQILTEVKRVGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +E + + +HL + G + + + ++ + + ++T + +D + Sbjct: 61 HLEFKNGHVLGLHLMLHGQLSLFNKHSEQ-----KYTIIELLFDDDTG-----LTLSDFQ 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L P+ D F+ YL + + +K LL+Q ++ GI Sbjct: 111 AAATPTLDPQDPGV---------PDALD--FDLDYLKEKLAATRTAIKTVLLDQHVLRGI 159 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AKLSP +N P + L + I+ VL DA + Sbjct: 160 GNAYADEILWDAKLSPF------SASNKIPDAQIKVLAKSIKHVLEDAEKQIIKT----- 208 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + ++ G+ I + R T+Y Sbjct: 209 HPDIISGEVRDFMQVHSSKKK--QTSTGETIHQKPVGSRKTYY 249 >gi|199594552|gb|ACH90740.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I ++ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEEIRRRAKYLLLDTAVGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D+ F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDVFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|299138806|ref|ZP_07031984.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] gi|298599442|gb|EFI55602.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidobacterium sp. MP5ACTX8] Length = 299 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 111/307 (36%), Gaps = 34/307 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE E I R + + N RF G+K+ V + K+L Sbjct: 1 MPEGNE---IHRWAERHTTAFVGKKMHVEAPNGRFREADV----LDGRKLERVMAKGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY---- 116 + + VHLG G + + + + + + + Sbjct: 54 GYVFGKDRILHVHLGRYGDWTEGQMPLPEERGALRVRMWPVGAKARKDAAEASTRHGWYS 113 Query: 117 ----NDPRRFGFMDLVE---------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK 163 ++P +D +E + L LGP+P D + K Sbjct: 114 SDDGSNPTPPEEIDWLELRGASDCSLWTDAQWETLLARLGPDPLDGD-DPKPAFEHIAKA 172 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEI 221 + + L+ Q +++GIGNIY E L+RA+LSP + R++ KD + L + Sbjct: 173 KTPIGVLLMQQDVLSGIGNIYRAELLFRARLSPFVEGRTVPMKTLQAMWKDSIPLLRAGM 232 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 I + +D H G + A VY + G+PC CG + R AGR+ Sbjct: 233 IDRRIVT-----TKPKDRPHKTGKP-LKEEAHYVYRRHGKPCF-VCGTKVLRKDVAGRTL 285 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 286 YWCPVCQ 292 >gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum JL354] Length = 260 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 104/290 (35%), Gaps = 33/290 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA-ATRGKKIIDVSRRAKY 59 MPELPE E R + + T+ + P G + R K Sbjct: 1 MPELPEAEANRLRVERDCLHRTIEAAEPGDDTSYIELPGDNERGRLVGHQFTRTHRHGKL 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 + E I VHLGMSGS + P + I + R+ + P Sbjct: 61 IFAGSESGPWICVHLGMSGSLR----PFDEADGPPDYAKFLIRFE-----GERRLAFRCP 111 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ G++ +V++ GP+ + +A +K+AL+ QK +AG Sbjct: 112 RKLGWVRVVDSPEAEIERI--GFGPDALEIGRDA--FAEVIGDSRGAIKSALIEQKKLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN++ E L+R + P RK L + D DA L Sbjct: 168 VGNLWSDEILYRTAIDPQRKGTDLSDSQLG-----------------DIYDAMRDILHAV 210 Query: 240 VHIDGSIGYFQNAFSVYGK-TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + + + ++ + G C CG I R GRS F+CT Q Sbjct: 211 VDTEADYSKLPDDWLIHTRDEGAEC-PRCGGEIVRTKVGGRSAFHCTRHQ 259 >gi|199594560|gb|ACH90744.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTP----VRAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGEIH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D++F+ +L + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDDAFDGDHLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] Length = 1230 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 110/305 (36%), Gaps = 43/305 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ I L + T+ + ++ + F A GKKI+D ++ Sbjct: 1 MPEIAEISRIVHYLKRYVVGKTIGAVKTQEDDIIYGKVGTSASAFQKAMTGKKILDARQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSF--------IIEHTSCAKPIKNPQHNHVTISLTNNTN 108 KY + ++ ++H GMSG + P++ + + + Sbjct: 61 GKYFWLVMDSQPHALMHFGMSGWMKFSNDDSAYYRPAKAEEEEWPPRYWKFVLEMKED-- 118 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFHKKN 164 K V + DPRR + LV+ + PL+ GP+P D +L + K Sbjct: 119 -PKIEVAFVDPRRLARIRLVDAKAEDMRNTTPLKENGPDPVLDKDVLTVEWLGKKLRKT- 176 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 ++GIGN E +++AKL P + + + + +L + V Sbjct: 177 ----------SNISGIGNWVGDEIMYQAKLHPEQYSNTFSDEQ------IKQLHDAMMYV 220 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC 284 A+ S + + + GK L N GQ I + GR++ Sbjct: 221 CDTAVKHLAESDKFPADWLMKYRWGK------GKKDANKLPN-GQTISFLKVGGRTSAIV 273 Query: 285 TYCQK 289 QK Sbjct: 274 ASVQK 278 >gi|84497372|ref|ZP_00996194.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] gi|84382260|gb|EAP98142.1| putative formamidopyrimidine-DNA glycosylase [Janibacter sp. HTCC2649] Length = 297 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 18/250 (7%) Query: 47 GKKIIDVSRRAKYLLIEL-EGNLSIIVHLGMSGSFIIEHTSCA-----KPIKNPQHNHVT 100 G+ D K+LL+ + L+ +HL M G+F + A + P H +V Sbjct: 38 GRVFADAQAVGKHLLVTAHDVGLTAHLHLAMDGAFSVRRHHRALHGDFPRTEPPVHGNVA 97 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L + T+ + +L++ LGP+P + + Sbjct: 98 WRLLSATHHGEL-------TDPAVCELLDEDGVLALR--ARLGPDPLRDDAEPDVARRRI 148 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLI 218 + +++QK++AGIGN+Y E L RA+L P R + +D + +I Sbjct: 149 QNSRRPIGALIIDQKVIAGIGNVYRAEILHRARLDPFTPGREIDDETFGALWQDTVDLMI 208 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 + I +A ++ R+ + + + ++VYG+ G PC S CG +R Sbjct: 209 LGLGAGWIVTDEAQMAAAREALVRGERVPRWPKRYAVYGRAGTPC-SVCGTTVRAQRVGL 267 Query: 279 RSTFYCTYCQ 288 + F+C CQ Sbjct: 268 QRLFWCPGCQ 277 >gi|301300324|ref|ZP_07206529.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852060|gb|EFK79739.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 133 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 + ++ +KNALL+Q IVAG+GNIY E LW +K+ P L + + Sbjct: 4 FSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEE------VK 57 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L I K L A +AGG+++R Y G FQ + Y +TG+PC CG I+RIV Sbjct: 58 VLRDNIIKELALATEAGGTTIRSYTDAFRHSGGFQFSLHAYQRTGDPC-ERCGTPIQRIV 116 Query: 276 QAGRSTFYCTYCQ 288 R T +C CQ Sbjct: 117 VGQRGTHFCPKCQ 129 >gi|197117207|ref|YP_002137634.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197086567|gb|ACH37838.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 261 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 32/284 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ I NL + + + H + P SAA G K+ V R K + Sbjct: 1 MPELPDLTIYAENLARKLTGKKIATVSFHDRGRLNVAPDELSAALIGAKVTAVRRTGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHL ++G F++ T ++ P VT++ + + + +DP+ Sbjct: 61 SFQADNGAMLRVHLMLTGGFVLTSTEHLDRLEAPV---VTVTFNDGS-----ALAVSDPK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 + + L + P+ + +A L K+ +K LL+Q ++ G Sbjct: 113 GWATLTLNPQPEREA--------PDALE--LSADQLQQLCAKQPKALIKALLLDQALIGG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A++SP L P + + L + I VL DAI S Sbjct: 163 IGNAYADEILWEARISPKSVAGKL------PPEAVSALARAIPAVLKDAI-----SELRK 211 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ + G S G + + + + T+Y Sbjct: 212 RHPDMVAGEYREFLKVH-RPGLK-QSPTGAPVIKENISSKQTYY 253 >gi|254382138|ref|ZP_04997500.1| DNA glycosylase [Streptomyces sp. Mg1] gi|194341045|gb|EDX22011.1| DNA glycosylase [Streptomyces sp. Mg1] Length = 280 Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 29/263 (11%) Query: 27 CLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTS 86 L R +LR P + G+ +DV+ R K+LL +EG L++ HL M G++ + + Sbjct: 41 ELLRSDLR--VPRLATVDLTGRTTLDVTPRGKHLLARIEGGLTLHSHLRMDGAWHVF-AA 97 Query: 87 CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEP 146 K P + + T YR+ ++L+ T + + + LGP+ Sbjct: 98 GEKWRGGPDYEIRAVLGTATHTAVGYRL--------PVLELLRTRDEDRV--VGHLGPDL 147 Query: 147 ADNSFNA-IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ++ + L ALL+Q+ +AGIGNIY E + A+++P +L Sbjct: 148 LGPDWDPALATARLLAAPERPLGEALLDQRNLAGIGNIYKSELCFLAQVTPWTPVGAL-- 205 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 P + +L ++L +D I VYG+ PCL Sbjct: 206 ----PGSDVPRLAGAAHRLLAAN--------KDRRRNTTGIHRPGQDLFVYGRARRPCL- 252 Query: 266 NCGQMIRRIVQAGRSTFYCTYCQ 288 CG +R Q R T++C CQ Sbjct: 253 RCGTPVREAPQEDRPTYWCPRCQ 275 >gi|149922422|ref|ZP_01910855.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816702|gb|EDM76193.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 302 Score = 158 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 23/289 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + +L + T++ + + + + GK+ VSR K + Sbjct: 1 MPELPDITLYVEHLRRRVVGETLSRLQILHPFVLRSVEPSLGS-LAGKRATGVSRLGKRV 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ LEG + +++HL ++G + K L + + + + Sbjct: 60 VLTLEGEVHVVIHLMIAGRLHWKAPGAKLGSK-------RTLLAAHFDHGALTLTEAGSK 112 Query: 121 RFGFMDL-VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R + L + + P G + + S + +N LK AL + +I+ G Sbjct: 113 RRASVHLALGAEGLAAHDPG---GVDVFEASSSE--FGAAIQARNHTLKRALTDPRILDG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E L AKLSPI+ T L + L + L + + Sbjct: 168 IGNAYSDEILHAAKLSPIKWTSRLSAAE------IEALHAACKSCLEASTARLREDFGE- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F+ +V+GK GEPC CG ++RIV A R T YC CQ Sbjct: 221 -GFPSKVTAFRADMAVHGKYGEPC-PECGDPVQRIVYASRETNYCATCQ 267 >gi|328479631|gb|EGF48819.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Lactobacillus rhamnosus MTCC 5462] Length = 142 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 8/149 (5%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + + RR KYLLI L ++I+ HL M G + + + +H+HVT + + Sbjct: 2 GAAVTTIDRRGKYLLIRLNNGMTIVSHLRMEGRYYVVSDA---KTPLDKHDHVTFTFQDG 58 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN 166 + + Y D R+FG M L+ T + P L LGPEP +F+ + + + Sbjct: 59 SQLR-----YRDLRKFGRMRLIHTGQEQLVPALAKLGPEPTAATFSESDFAQKLKRHHKA 113 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLS 195 +K+ LL+Q +VAGIGNIY E LW +KL+ Sbjct: 114 IKSVLLDQTVVAGIGNIYADEVLWLSKLN 142 >gi|54288361|gb|AAV31649.1| hypothetical protein Red2C11_65 [uncultured alpha proteobacterium EBAC2C11] Length = 291 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 108/290 (37%), Gaps = 38/290 (13%) Query: 4 LPEVEIIRRNLMMV---MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 LPE I R + N +T + RF ++ G+ I++ K+L Sbjct: 28 LPEGHTIHRAARDHNSLLANQKLT---VLSPQGRFT---EGASRLTGRICINIEAFGKHL 81 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + ++ VHLG+ G + A+P V + L NT+ D Sbjct: 82 IYHFDNGEALHVHLGLFGKIRKQRLPAAEPRGA-----VRVRLVGNTHL-------IDIN 129 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +++ + +GP+ + N + K + + +++Q ++AGI Sbjct: 130 GPNICEILAEHEFMD--LINRIGPDVLRSDANPTLAFEKIKKSKAPIGRLIMDQAVMAGI 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GNIY E LWR L P + Q N +D L ++ I +D +S R Sbjct: 188 GNIYRSEILWRQALHPETPGNRIDQQTFNRIWEDARALLTIGVKHNAIITVDGARASSRR 247 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y + +++ K P C +RR +GR F C CQ Sbjct: 248 Y----------RERVNIFAKEVCP---RCKGKVRRFEISGRRAFVCEVCQ 284 >gi|199594590|gb|ACH90759.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 +++ V + L R +LR+ P + G++I DV RRAKYLL++ + ++HLGM Sbjct: 1 HLQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIEDVRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGQVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|111023233|ref|YP_706205.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110822763|gb|ABG98047.1| probable DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 249 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 109/289 (37%), Gaps = 46/289 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWRTANSLRDALEGKVLTRCDVR-------VPRYATVDLSGQLVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G+ SI HL M G++ I + + P H + T + + + Sbjct: 54 LIRV-GDYSIHTHLKMEGAWHIY--APDTKWRRPTHQARIVLATEDRVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAG 179 G +++ + + LGP+ ++A + + AL++Q+ +AG Sbjct: 105 --GITEIL--GRDDEESAVGHLGPDLLGPDWDADRAIRNLRAAGDQPIGLALVDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + + P + + + +++I + I Sbjct: 161 LGNVYRNEVCFLRGVHPYTPSSEVADLPALVT-LAHRMIHIDKNNSI------------- 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VYG+ G+ C CG +I + F+CTYCQ Sbjct: 207 ----------RHRPWVYGRAGKRC-RRCGTVIEGHDLGQQQIFFCTYCQ 244 >gi|326771864|ref|ZP_08231149.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] gi|326637997|gb|EGE38898.1| DNA-formamidopyrimidine glycosylase [Actinomyces viscosus C505] Length = 333 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 109/343 (31%), Gaps = 70/343 (20%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + + RF ++ G+ ++ K+L + Sbjct: 1 MPEGHTIHRLAAALDELYGGQSLRVRSPQGRF---ADGASRLDGQVLLGSQAHGKHLFLP 57 Query: 64 LEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK--- 110 + +HLG+ G++ + + K Sbjct: 58 FGPRADMSLDDASVTWLRIHLGLYGAWTFDGDREFTAPHAIGAPRRRVGERGEHALKGGG 117 Query: 111 --------------------------------------KYRVI----YNDPRRFGFMDLV 128 + R++ D +L+ Sbjct: 118 GSALTGLNGGSLEAEGQGTATHGPAPEEWEPPEPRGAVRLRLLGEHGVADLTGPAACELL 177 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 + R LGP+P + + + ++ L++Q +++G GNIY E Sbjct: 178 DAEGVAAVR--RRLGPDPLRADGDVEAFVAKARSRRKSIGELLMDQSVISGAGNIYRAET 235 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+R +SP R + Q + L + ++++ ++ + G + D + + Sbjct: 236 LFRVGVSPFRAGNRISQ------ERLRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLPP 289 Query: 249 F---QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + VY +TG PCL CG + A R F+C CQ Sbjct: 290 DDPEAGRWYVYHRTGRPCL-RCGTPVAEREVASRRLFWCPTCQ 331 >gi|253317168|ref|ZP_04840381.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 187 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 18/197 (9%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H HV L+N+ ++IY+D RRFG ++ + YP + PEP N Sbjct: 7 KHWHVIFELSNDK-----KLIYSDIRRFG--EIRNVASVASYPSFLEIAPEPFTNEALTY 59 Query: 155 YL--THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 YL HQ KN +K +L+ K++AG GNIY CEAL+RA + P +K + L Sbjct: 60 YLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEM-- 117 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 + +++VL + I GG+S+ DY H DG G Q +VY +P CG I Sbjct: 118 ----VFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYK---QPVCKVCGSQIE 170 Query: 273 RIVQAGRSTFYCTYCQK 289 + A R++ YC CQK Sbjct: 171 TKIIATRNSHYCPVCQK 187 >gi|284042578|ref|YP_003392918.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] gi|283946799|gb|ADB49543.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] Length = 281 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 106/290 (36%), Gaps = 27/290 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVEI R L + V N F A G + VSRR K+L Sbjct: 1 MPELPEVEITARLLSEGVAGARVESTLAPGINALKTFDPPLHA-LDGTTLTGVSRRGKHL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++E + L +++HL +G + + + L ++ R+ + Sbjct: 60 VVESDAGLVLLIHLMSAGRLQLYEKRAG------LRDRTSRILLRLDGDRELRLREFGTK 113 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPE--PADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 + + L+ + TLGP+ P F K L L +Q+ +A Sbjct: 114 QAAWAKLLRAEELDAEEAVATLGPQAWPDPPPFGP------LLAKARPLHTLLRDQRTIA 167 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 GIG +V E LW A+LSP ++ R L + E + AI G + + Sbjct: 168 GIGRSWVDEILWEARLSPFKRGRDLSEEEA-----------ERLRAATVAILGGAIAHYE 216 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V+ + GEPC CG ++ + YC Q Sbjct: 217 EALALPLPDKLPLPLRVHRRQGEPC-PRCGAELKAVHYEDYVIAYCPVEQ 265 >gi|226365740|ref|YP_002783523.1| DNA glycosylase [Rhodococcus opacus B4] gi|226244230|dbj|BAH54578.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 249 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 107/289 (37%), Gaps = 46/289 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L ++ +T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWRTANSLRDALEGKVLTRCDVR-------VPRYATVDLSGQVVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LI + G+ SI HL M G++ I + + P H + T + + + Sbjct: 54 LIRV-GDYSIHTHLKMEGAWHIY--APDSRWRRPTHQARIVLSTEDRVAVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAG 179 G +++ + + LGP+ ++A + + AL++Q+ +AG Sbjct: 105 --GITEILARDDEE--SAVGHLGPDVLGPGWDADTAIRNLRAAGDQPIGLALVDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y E + + P + + +++I + + Sbjct: 161 LGNVYRNEVCFLRGVHPYTPAAEVTDLPALVA-LAHRMIHADKNNSV------------- 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ VYG+ G+ C C +I + F+CTYCQ Sbjct: 207 ----------RHRPWVYGRAGQRC-RRCRTVIEGHDLGQQQIFFCTYCQ 244 >gi|48243642|gb|AAT40785.1| putative formamidopyrimidine-DNA glycosylase Fpg [Haemophilus influenzae] Length = 156 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 12/160 (7%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 A +K+I +SRRAKYL+I+LE +I HLGMSGS + +H+H+ I Sbjct: 7 AQITQQKVIALSRRAKYLIIQLETGY-MIGHLGMSGSLRVVEKGDLID----KHDHLDIV 61 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 + N V YNDPRRFG E ++P LGPEP F++ YL + K Sbjct: 62 VNNGKV-----VRYNDPRRFGAWLWTEK--LNEFPLFLKLGPEPLSEEFDSDYLWQKSRK 114 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 K + LK L++ +V G+GNIY E L+ L P + +R Sbjct: 115 KQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKNSRE 154 >gi|262383499|ref|ZP_06076635.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] gi|262294397|gb|EEY82329.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_33B] Length = 275 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 114/297 (38%), Gaps = 32/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQARETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDTD------RLFNTVKSTLKEMTRQGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---APC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|199594578|gb|ACH90753.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 +++ V + L R +LR+ P + G++I + RRAKYLL++ + ++HLGM Sbjct: 1 HLQDRRVHGVILRRADLRWPIPPEIAQLLPGQRIGGIRRRAKYLLLDTAIGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG L+ + Sbjct: 60 SGSLRVLPGDTPL----RPHDHVDISLDNGR-----LLRFNDPRRFG--SLLWQPAGQVH 108 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 P L+ LGPEP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 109 PLLQGLGPEPLDEAFHGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|84496902|ref|ZP_00995756.1| DNA glycosylase [Janibacter sp. HTCC2649] gi|84383670|gb|EAP99551.1| DNA glycosylase [Janibacter sp. HTCC2649] Length = 282 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 104/284 (36%), Gaps = 36/284 (12%) Query: 9 IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNL 68 L + +T F FP +A RG +V K+LL ++ L Sbjct: 3 RTADRLHRALSGTPIT-------LSDFRFPEIATADLRGAVTTEVVSHGKHLLHRVDSGL 55 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 ++ HL M G + +E P + + R G +++V Sbjct: 56 TVHSHLKMEGQWRVER---------PADTARWLRRADLRAAVGTDTWSAIGLRLGMLEIV 106 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEA 188 TS + + LGP+ ++ Q + + ALL+Q+++AG+G ++ E+ Sbjct: 107 PTSREGDI--VGHLGPDVLGPDWDPEQAVAQVLASTTVIGAALLDQRVLAGVGTLWASES 164 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 L+ ++ P + + + L+ I +++ +S V + Sbjct: 165 LFIERIGPWSAAAQVAP------ERVEALVARIHRLMD-------TSRHHAVQSSTGVRR 211 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 V+ ++G PC CG IR + R+ FYC CQ Sbjct: 212 RGEEHYVHARSGRPC-RRCGNTIRVSMIGPPGRERTMFYCPTCQ 254 >gi|329946399|ref|ZP_08293966.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328527375|gb|EGF54373.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 340 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 108/350 (30%), Gaps = 77/350 (22%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF ++ G+ ++ K+L + Sbjct: 1 MPEGHTIHRLAAALDELYGGQKLHTSSPQGRF---ADGASRLDGQVLLGSQAHGKHLFLP 57 Query: 64 L----------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY- 112 E + +HLG+ GS+ + + K Sbjct: 58 FGARADVPVDDESVTWLRIHLGLYGSWTFDGDREFTAPHAIGAPRRRVGERGEHALKGGG 117 Query: 113 ---------------------------------------------------RVIYNDPRR 121 R D Sbjct: 118 GSALAGLSGGADDVTDRREGQEGDSSSHDGPSPNEWEPPKPRGAVRLRLLGRHGVADLTG 177 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 +L++ R LGP+P +A + + ++ L++Q +++G G Sbjct: 178 PAACELLDAEGVAAVR--RRLGPDPLRADADAEVFVAKARSRRKSIGELLMDQSVISGAG 235 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY EAL+R +SP R + + + L + ++++ ++ + G + D Sbjct: 236 NIYRAEALFRVGISPFRAGNRVSE------ERLRAIWEDLRPLMEYGVATGFITTVDLDD 289 Query: 242 IDGSIGYF---QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + VY +TG PCL CG + A R F+C CQ Sbjct: 290 VPDPLPPDDPEAGRWYVYHRTGRPCL-RCGTPVAEREMAARRLFWCPTCQ 338 >gi|284992312|ref|YP_003410866.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065557|gb|ADB76495.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Geodermatophilus obscurus DSM 43160] Length = 284 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 105/293 (35%), Gaps = 39/293 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + + + T+ L P + G+ + V R K++ Sbjct: 1 MPEGDTVWLAAKRMDTALGGATLRRGELR-------VPQLAATDLAGRTVSAVVPRGKHM 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ H M GS+ I + P + I T+ YR+ Sbjct: 54 LTRFTDGWTLRTHYRMDGSWHIYRHGT-RWRGGPAFSIRAILATDEWECVGYRL------ 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 D+ +++ + LGP+ ++ + + A+L+Q+ + G Sbjct: 107 ----HDVAMVRTEHEDQLVGHLGPDVLGPDWDLEEALRRLRAHPDEQIGVAILDQRNLCG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GN+Y E L+ + P + + + L +L++ + +++ D R Sbjct: 163 PGNLYKVEGLFVCGVHPWMRVADV--------EDLPELVERTRSLMLANRD------RPE 208 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 G + ++ VYG+ PC C I R Q R T++C CQ Sbjct: 209 QSTTGDLRRGRD-HWVYGRKDRPCY-RCSTPILRGDQGPDLQERITYWCPRCQ 259 >gi|257068348|ref|YP_003154603.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] gi|256559166|gb|ACU85013.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] Length = 350 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 105/328 (32%), Gaps = 50/328 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + + RF +A G ++ K+L + Sbjct: 1 MPEGHTVHRLAAAFDRAFAGQRVRTSSPQGRFSE----AAQLDGMVLLGAEAVGKHLFLP 56 Query: 64 L------EGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-----SLTNNTN 108 + + +HLG+ GS+ + + L + Sbjct: 57 FAPAADVDPGAPVVRHVHIHLGLYGSWTFAGDPGFADAHAIGAPRLRMGEREEELDGAAD 116 Query: 109 TKKY------------RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-- 154 ++ D ++++ + L LGP+P Sbjct: 117 WRRLVPRPTVRLRIAGAHGLADLTGPTACEILDAQGRQAV--LDRLGPDPLRPDPGGRER 174 Query: 155 -YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPK 211 + + + L+NQK+VAGIGNIY E L+RA+L P R L + Sbjct: 175 RRFVEAVRRSRTTIGALLMNQKVVAGIGNIYRAELLFRARLDPFVPGRDLTAGMCEEMWE 234 Query: 212 DILYKLIQEIQ-----------KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 D++ + + + + I R D + + +F VY + Sbjct: 235 DLVALMAYGARTGRIVTTQPAHRDVEARIVERSRGTRQNGDEDPEVVPREKSFYVYHRQT 294 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 PC CG +R A R+ F+C CQ Sbjct: 295 LPC-RLCGTTVRSGDLAARTVFWCPRCQ 321 >gi|163841995|ref|YP_001626400.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162955471|gb|ABY24986.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 292 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 108/313 (34%), Gaps = 51/313 (16%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + RF +A G+ ++ K L ++ Sbjct: 1 MPEGHTIHRLATQLQDVFAQQKLNAMSPQGRF---AAGAARIDGEILVAARAHGKQLFVQ 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAK---------------------PIKNPQHNHVTIS 102 + VHLG+ G++ + + P K P + Sbjct: 58 FSNQAILRVHLGLYGAWDFGGDATFRGASSIGAPRRLGERELASEDLPYKGPPEPIGAVR 117 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-----IYLT 157 L + + D R +++ + LGP+P ++ A Sbjct: 118 LRLVSQHG-----WADLRGPSACEVLTAAEARAIQ--AKLGPDPLNSGQEATLAGEAEFL 170 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL--IQNNGTPKDILY 215 + + L+ Q +VAGIGN+Y E L+RAK++P+ + L + D + Sbjct: 171 RRVRSSARPVAVLLMAQNVVAGIGNVYRAELLFRAKINPMLSGKQLSITKARELWLDAVV 230 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 L + G + R G + VY + G+PC S CG I V Sbjct: 231 LL------------NRGVTDGRIITTEPGDCDEPADVHYVYKRVGQPCFS-CGTEIAGSV 277 Query: 276 QAGRSTFYCTYCQ 288 AGR+ F+C CQ Sbjct: 278 LAGRNLFFCPSCQ 290 >gi|301309603|ref|ZP_07215545.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] gi|300832692|gb|EFK63320.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] Length = 277 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 115/296 (38%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|325962094|ref|YP_004240000.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] gi|323468181|gb|ADX71866.1| formamidopyrimidine-DNA glycosylase [Arthrobacter phenanthrenivorans Sphe3] Length = 282 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 101/300 (33%), Gaps = 40/300 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + P + G + +V K+L Sbjct: 1 MPEGDSVWRAANQLHQALAGQKLVASDFR-------VPRFATLNLAGWTVAEVVPCGKHL 53 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L+ + G L+I HL M G++ + T R Sbjct: 54 LMRVVGPDGKKLTIHSHLKMEGTWQVYPPGG------------RWRKPGFTARCVLRTPV 101 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQK 175 D F + + + + LGP+ ++ + + ALL+Q+ Sbjct: 102 ADAVGFSLGLVEVVATADEDSIVGFLGPDLLGPDWDLDEAERRVRAAPEVPVGVALLDQR 161 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKL-IQEIQKVLIDAIDAGGS 234 +AGIGNIY CEA + + + P ++ D L + + ++A G Sbjct: 162 NLAGIGNIYRCEACFLSGVHPASPVSAVPDLRTMMTDAKQLLEVNLGPGRRVTILNARGL 221 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA------GRSTFYCTYCQ 288 + + G GY VY + +PCL CG IRR V R ++C CQ Sbjct: 222 PV---GRMAGRPGY-----WVYRREHQPCLK-CGTPIRRGVLGKSNGDEERDIYFCPTCQ 272 >gi|269795741|ref|YP_003315196.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097926|gb|ACZ22362.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 351 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 103/361 (28%), Gaps = 86/361 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R V T + + RF +A G + K + Sbjct: 1 MPEGHTVHRLARTFGEVFGGAT---VEVSSPQGRF---AAGAALLDGLVLHSAEAVGKQM 54 Query: 61 LIEL-------------EGNLSIIVHLGMSGSFII------------------------- 82 + + + VHLG+ GS+ Sbjct: 55 FLGFGPADHLPTAEGLADDLRWLRVHLGLYGSWTFAADGSTQVAHAIGAPRKRVGERETV 114 Query: 83 -----------------EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 +H +P + + D Sbjct: 115 LEAGTPGNVVAPTTGLDQHDPDGPEPWDPPDPRGAVRARILSEHA-----VADLTGPTAC 169 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 ++V R LGP+P + + S + L+NQ +VAG+GNIY Sbjct: 170 EVVSPDAALAVQ--RRLGPDPLRGDADPERFVAAVRRSRSAVGLLLMNQDVVAGVGNIYR 227 Query: 186 CEALWRAKLSPIRKTRSLIQN--NGTPKDILYKLIQEIQ---------------KVLIDA 228 E L+RA+ SP R + D++ + D Sbjct: 228 AEVLFRAEQSPTTPGRDVPAEVLRAMWDDLVVLMADGAAIGAIVTTRPGDRGDGAHPADE 287 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G +R + +F VY + G+PC C + R AGR+ F+C CQ Sbjct: 288 KAPGRRRVRQNTDAEPGAVPRDESFYVYQRDGQPC-RVCRTEVARAEMAGRNLFWCPTCQ 346 Query: 289 K 289 + Sbjct: 347 R 347 >gi|332670076|ref|YP_004453084.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Cellulomonas fimi ATCC 484] gi|332339114|gb|AEE45697.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Cellulomonas fimi ATCC 484] Length = 258 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 118/290 (40%), Gaps = 46/290 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +++RR + + + L R LR+ + G+ ++ K+LL Sbjct: 1 MPEGDVLRRTAARL--DAALVGTPLVRAELRWPTAA--TVDLVGRTVLGTRPYGKHLLTR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + ++ HL M G++ +E T + + V L T ++ G Sbjct: 57 FDDGRTLHTHLRMDGTWRVEPTGSSA--AQGRSTRVRALLATERWTALGLLL-------G 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGIGN 182 +D+V T + + LGP+ D+ F+ ++ + + + LL+Q +VAGIG Sbjct: 108 MLDVVPTRDEAT--LVGHLGPDVLDDPFDLDEALRRWAARGATPVAEVLLDQTVVAGIGT 165 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 I++ E+L+ ++ P ++ ++++ ++++ ++ +G + R Sbjct: 166 IFMAESLFAERVWPWTPADAVPDPG--------RVLRVARRLMQRSVLSGRPAER----- 212 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMI----RRIVQAGRSTFYCTYCQ 288 V+G+ PC+ CG I R R F+C CQ Sbjct: 213 ------------VHGRNRRPCV-RCGTPITVGSARPAPMSRPVFWCPRCQ 249 >gi|302528489|ref|ZP_07280831.1| endonuclease VIII [Streptomyces sp. AA4] gi|302437384|gb|EFL09200.1| endonuclease VIII [Streptomyces sp. AA4] Length = 272 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 100/296 (33%), Gaps = 44/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L + T+ P + G+++ V K+L Sbjct: 1 MPEGDTVFLAGKLLDRALAGKTLVRGEFRH-------PELATVDLAGREVHGVGTVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G+L++ HL M GS+ I+ + P H+ + +T + +R+ Sbjct: 54 FTRFSGDLTLHSHLKMDGSWKIQ--AAGAKWAMPAHHARVVLMTEDVQAVGFRL------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH----KKNSNLKNALLNQKI 176 DL ++ + LGP+ D + + K L +ALL+Q++ Sbjct: 106 ----HDLKLLPTAEEHTLVDHLGPDLLDPQWTDEHAALAAANLSAKPERELGDALLDQRV 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y CE + +SP + + + D Sbjct: 162 MAGVGNLYKCEISFLLGVSPWTPVSEVDPARAVALARKLLVANAWRHEQATTGDL----- 216 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VY +T + C CG + Q R T+ C CQ Sbjct: 217 -----------RRGRRTWVYERTRQGCF-RCGGRLLVRQQGDGQYQRPTWCCPRCQ 260 >gi|83816661|ref|YP_444607.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] gi|83758055|gb|ABC46168.1| formamidopyrimidine-DNA glycosylase [Salinibacter ruber DSM 13855] Length = 265 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 33/291 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELP+ + RR L + + D + + D PH RG+ + D R K Sbjct: 1 MPELPDAVVYRRRLADAALDRPIADATVVDPLILGDGLEPHRLGEVLRGRTLTDTHRHGK 60 Query: 59 YLLIEL-EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ + E + +H GM+G + P++ +V + + + + Sbjct: 61 HVFVRYGEETGWLALHFGMTGRVQVVPDGT-----MPEYAYVQVHFEDGG-----ALAFE 110 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 PR+F + LV+T + + LGP+ +A F + +K LL+Q +V Sbjct: 111 CPRKFARVRLVDTPDAFVEA--KDLGPDARRADVDA--FLAPFASRRGAIKGRLLDQSVV 166 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNIY EAL++ + P L + + L L IQ+VL AI Sbjct: 167 AGLGNIYADEALYQEGIHPRTTVPELSETD------LRGLYDAIQRVLDAAIA------- 213 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V D + E C G + +GR+ ++ Q Sbjct: 214 --VDADPEALDPDRFMLPHRYGDEHC-PKTGVPLDTETVSGRTAYFSPTRQ 261 >gi|297521244|ref|ZP_06939630.1| formamidopyrimidine-DNA glycosylase [Escherichia coli OP50] Length = 138 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 13/151 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ + ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIY-RLSDQPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL II+HLGMSGS I + + +H+HV + ++N + Y DPR Sbjct: 60 LLELPEG-WIIIHLGMSGSLRI----LPEELPPEKHDHVDLVMSNGKVLR-----YTDPR 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 RFG + T + L LGPEP + F Sbjct: 110 RFGA--WLWTKELEGHNVLTHLGPEPLSDDF 138 >gi|332997432|gb|EGK17048.1| putative formamidopyrimidine-DNA glycosylase [Shigella flexneri K-218] Length = 123 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 7/130 (5%) Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 ++ + +K L++ K+V G+GNIY E+L+ A + P R SL L + Sbjct: 1 MREEKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAE------CELLAR 54 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGR 279 I+ VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R Sbjct: 55 VIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQR 113 Query: 280 STFYCTYCQK 289 +TFYC CQK Sbjct: 114 ATFYCRQCQK 123 >gi|256841344|ref|ZP_05546851.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] gi|256737187|gb|EEU50514.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] Length = 275 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 116/297 (39%), Gaps = 32/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTCRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---DPC-PICGERIQKEAYLGGSIYYCPHCQR 273 >gi|289620160|emb|CBI53287.1| unnamed protein product [Sordaria macrospora] Length = 416 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 112/315 (35%), Gaps = 48/315 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ E+ L + V F +A GK++ + Sbjct: 1 MPEIAEIARAVHFLRLHFVGKVVKHAEAIDDANVFGKVGTDGPKMAADLIGKRLYQQGPK 60 Query: 57 ----AKYLLIELEG--NLSIIVHLGMSGSFIIEHTSCAK------------PIKNPQHNH 98 +L +++H GM+G I+ A P++ Sbjct: 61 ENTSG-----QLSQIMPPHLVMHFGMTGWIHIKGERTAYTNYYKKMKPDELDKWPPKYWK 115 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAI 154 I + DPRRFG + V+ K +Y PL GP+P + F Sbjct: 116 FKIVTEEGDEMA-----FTDPRRFGRVRAVDCPGKDIRKYSPLVENGPDPVVDLDVFTED 170 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL + + +K LL+Q +++GIGN E L++AKL P + + Sbjct: 171 YLRERMKSRRVPIKALLLDQAVISGIGNWVADEVLYQAKLHPEQYCNDFSDAE------I 224 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 +L + I+ V A+D G+S + + + + + + + T G + + Sbjct: 225 KQLYESIRYVCQTAVDKLGNSDQFPDDWLFNYRWGKGSKNAHSHT------PNGDKLAFL 278 Query: 275 VQAGRSTFYCTYCQK 289 GR++ Y QK Sbjct: 279 TVGGRTSCYAPARQK 293 >gi|167948611|ref|ZP_02535685.1| formamidopyrimidine-DNA glycosylase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 160 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 13/172 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELPEVE RR + ++ V+ I + + LR+ P G+++ V RR KY Sbjct: 1 MPELPEVETTRRGIAPHLEGAAVSGIVVRQPRLRWPVPRKSGVHWLNGQRLNSVGRRGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL+ S+++HLGMSGS + +H+H + NN+ + DP Sbjct: 61 LLLNFAPG-SLLLHLGMSGSLRVLPNGTPPQ----RHDHFDLEFDNNS-----LLRLRDP 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 RRFG + T ++ L LG EP F+ YL ++ +K + Sbjct: 111 RRFGAVLWQPTGECHE--LLARLGLEPLREGFDGDYLHQIGQSRSVAIKQLI 160 >gi|3850130|emb|CAA21931.1| hypothetical protein [Candida albicans] Length = 372 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 118/364 (32%), Gaps = 84/364 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----------FSAATRGKKI 50 MPE+ EV + L + +T + L L F A + Sbjct: 1 MPEVAEVSHVCALLKRNILGFRITKVNLLHDPLLFPVLKDTNNAEKELNKMRKALTNAVV 60 Query: 51 IDVSRRAKYLLIELEGNLS---IIVHLGMSG---------------------------SF 80 V R KY I L + + +++H GM+G F Sbjct: 61 TSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMVKLRNVHSHLAFMENGGDKKALEKLERF 120 Query: 81 I-----IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV------E 129 I+ K P+ + L NN KK ++DPRR + L+ Sbjct: 121 RYKDSRIKPDVEVKQEWPPRFTKFDMELENND--KKLEFAFSDPRRLARVRLLSGLEVST 178 Query: 130 TSLKYQYPPLRTLGPE------------PA---DNS--------FNAIYLTHQFHKKNSN 166 + PL LGP+ P D + + K Sbjct: 179 DESLLKLSPLDALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEFSALILSKKKP 238 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K+ LL+Q AG+GN E L++A + P + + ++ ++ +L + V Sbjct: 239 IKSLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIKQLYDSLIYVC 298 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 +A+ G + + + G+ + N G ++ I GR++ YC Sbjct: 299 EEAVRVEGDVAKFPDDWLMLHRWGK------GRKEKRKTPN-GYILDHITVGGRTSCYCP 351 Query: 286 YCQK 289 Q+ Sbjct: 352 ELQR 355 >gi|297162473|gb|ADI12185.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 100/268 (37%), Gaps = 36/268 (13%) Query: 24 TDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII 82 + + LR G++ R K+L+ +G ++ H GM+G Sbjct: 2 ERVEVSDAGVLRGVTAQRLRRELTGRRFDPPERHGKWLIARTDGPTVLL-HFGMTGDLTC 60 Query: 83 EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTL 142 H+ VTI L + + + Y D R+ + L T L Sbjct: 61 HAHDDPPH----PHDRVTIVLDDGHDLR-----YRDQRKLRGLWLAATDADLD-RILGDQ 110 Query: 143 GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 GP+ S + L + ++ +K L +Q +VAG+GN+ E LWRA ++P R+T Sbjct: 111 GPDAL--SVSRAELDKRLAGRHGRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDE 168 Query: 203 LIQNNGTPKDILYK--LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 L T + + L+ +Q + + + RD Sbjct: 169 LTPEERTRLERAMRGVLLTSVQAGHVPTSPSWLTGRRDDPD------------------- 209 Query: 261 EPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 P CG +RR AGR+T +C +CQ Sbjct: 210 -PHCPRCGGPLRRSRMAGRTTAWCPHCQ 236 >gi|322418248|ref|YP_004197471.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] gi|320124635|gb|ADW12195.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] Length = 261 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 32/284 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + V + H++ S A G ++ V R K + Sbjct: 1 MPELPDLTVYAENLGKALTGKKVDRVEYHQRGKLNVSAAELSRALAGAEVTGVQRGGKQV 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + VHL ++G F++ S + QH +T++ ++ + + D + Sbjct: 61 AFHFGNGALLRVHLMLTGGFVLTSPSALDRL---QHPVLTVAFSDGS-----ALALTDEK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN-LKNALLNQKIVAG 179 + + L K P+ + +A L +K +K LL+Q ++ G Sbjct: 113 GWASVALNPGEEKDA--------PDAL--ALSAEQLQQLCQRKPRTLIKPLLLDQALIGG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A++SP L P + + L I VL DAI + Sbjct: 163 IGNAYADEILWAARISPKSPAGKL------PPEAVKALADAIPAVLKDAI-----TELRK 211 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ V+ E +S G I + + T+Y Sbjct: 212 RHPDMVSGEYREFLKVHR--PELKVSPTGAKIIKENVQSKRTYY 253 >gi|315604606|ref|ZP_07879669.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313618|gb|EFU61672.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 180 str. F0310] Length = 345 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 64/364 (17%), Positives = 109/364 (29%), Gaps = 94/364 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + T + RF ++ G I V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGT---VSASSPQGRFASS---ASLLDGWVIQRVRVHGKHM 54 Query: 61 LIEL------------------------------EGNL---SIIVHLGMSGSFIIEHTS- 86 I + + +HLG+ G + Sbjct: 55 FIGFVAPQPGRTYEAGVELLEGAAAGSGEPILGEDAPWPNHWVHIHLGLYGWWRFNGDET 114 Query: 87 ------------------------------------CAKPIKNPQHNHVTISLTNNTNTK 110 + V + L N+ Sbjct: 115 VVDEGHGVAHRIPNVAPGQWNGHSETRWGEGFGEAKAGEWQPPEPVGAVRLRLANDH--- 171 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNS 165 D +L+ + LGP+P D ++ A H K Sbjct: 172 ----AVADLVGPNRCELISDEERRAAE--AKLGPDPLDAGARSDAQAAERFAQVAHAKRR 225 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 ++ +++Q I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ Sbjct: 226 SIGEIVMDQSIIAGVGNIYRADALFLAGISPYRKGANVSLKRLRD---LWVLICDLMNRG 282 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + A + + + + VY +TG CL CG IR + R F+C Sbjct: 283 LAAGRLDTMDPDEAPNPPIEGDEEASRWYVYHRTGRACL-RCGTPIREALMQNRRLFWCP 341 Query: 286 YCQK 289 CQ+ Sbjct: 342 SCQR 345 >gi|300788119|ref|YP_003768410.1| endonuclease VIII [Amycolatopsis mediterranei U32] gi|299797633|gb|ADJ48008.1| endonuclease VIII [Amycolatopsis mediterranei U32] Length = 269 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 100/294 (34%), Gaps = 42/294 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V ++ + M T+ P + G++++DV K+L Sbjct: 1 MPEGDTVFLVAKRFANAMTGKTLLRGEFR-------VPQLATVDLSGREVLDVGTVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 GNL++ HL M G + + AK + H V + + Sbjct: 54 FTRFSGNLTLHSHLLMDGMWDVYPAG-AKWRRPGHHARVIFTAADVQVI----------- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF----HKKNSNLKNALLNQKI 176 F DL + ++ + LGP+ D + +L L ALL+Q + Sbjct: 102 GFRVHDLKLVATSKEHDLVAHLGPDLLDPKWTDEHLKQAIANLTAAPARELGLALLDQHV 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y CE + ++P + + KL+ G Sbjct: 162 LAGVGNLYKCEIAFLLGVTPWTPVSEVDAGRTVA--LARKLLLANAIAGRFDQSTTGHLD 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTY 286 R+ + VY +T + C CG + Q R T++C Sbjct: 220 RNRKN------------WVYERTRQGCF-RCGGKLLVRTQGHDVQRRPTWFCPK 260 >gi|298376079|ref|ZP_06986035.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] gi|298267116|gb|EFI08773.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 3_1_19] Length = 275 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 114/297 (38%), Gaps = 32/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDS------LFNTVKSTLEEMTCRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ+ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQR 273 >gi|269218010|ref|ZP_06161864.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212945|gb|EEZ79285.1| DNA-formamidopyrimidine glycosylase [Actinomyces sp. oral taxon 848 str. F0332] Length = 355 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 21/242 (8%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSC----AKPIKNPQHNHVTISLTNNTNTKKYRVIY-NDP 119 +G L + +HLG+ G + +++ HN V + + + + D Sbjct: 118 DGPLWLHIHLGLYGRWHFTGEGSDAIVGAGVRSGNHNAVNVGAGSTVRLRLAANGFTADL 177 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSF-NAIYLTHQFHKKNSNLKNALLNQKIVA 178 ++++ + LGP+P N + ++ S + +L+Q I A Sbjct: 178 TGPSRCEILDGPGVRA--AVSKLGPDPVRNEPGDRERFVEAVRRRRSPVGQLVLDQSIAA 235 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNN--GTPKDILYKLIQEIQKVLIDAI------- 229 G GNIY + L+R +SP+R + D++ + ++ +I + Sbjct: 236 GPGNIYRADCLFRVGISPLRPGNKVSAERLKALWDDLVETMQADVPDGVIRTVPESLRPE 295 Query: 230 --DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +A G+ D DG Q F+VY +TG PCL CG + AGR F+C C Sbjct: 296 PAEASGAKNPDAEGADGDDPEAQ-RFAVYHRTGRPCL-RCGTPVAEKEMAGRRLFWCPSC 353 Query: 288 QK 289 Q+ Sbjct: 354 QR 355 Score = 37.2 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 37/151 (24%), Gaps = 24/151 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + I R + + D+ RF + G K+ Sbjct: 1 MPEGQAIHRIARLINERFEG---ADVVASSPQGRF---SDGARRLDGLTAGRAEAWGKHF 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + GSF + + +L + + R+ + Sbjct: 55 FMPFADG----------GSFARADNGPSSGMPAGS------ALQSEEESSSGRLNAKNAI 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 G L ET L L GP Sbjct: 99 APGAEHLAETPL--GGTSLGDDGPLWLHIHL 127 >gi|256379789|ref|YP_003103449.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] gi|255924092|gb|ACU39603.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Actinosynnema mirum DSM 43827] Length = 265 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 99/296 (33%), Gaps = 44/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + L P +A G++++ V K+L Sbjct: 1 MPEGDTVFLAGHRLADALTGRVLLRGQLRH-------PRFATADLAGREVLGVRSVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G+LS+ H M G++ + + + P H + + + + Sbjct: 54 FTRFSGDLSLHSHFRMDGAWHLYRPG--ERWRRPGHQARAVFEVPDRQAIGFAL------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKI 176 DL ++ + LGP+ + ++ L ALL+Q++ Sbjct: 106 ----HDLELLPTADEHRLVGHLGPDLLADDWDEAAEAEAVRGLVAEPERELGLALLDQRV 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y E + +SP ++ L Sbjct: 162 LAGVGNLYKAEVCFLLGVSPWSPVSAVDPVETVRLCRRLLLANAW--------------- 206 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 R GS+ Q V+ +TG PC CG +R Q R ++C CQ Sbjct: 207 RPEQSTTGSLRRGQQ-HWVFERTGRPCA-RCGTRVRVGGQGAGVLERVAYWCPRCQ 260 >gi|227501449|ref|ZP_03931498.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] gi|227077474|gb|EEI15437.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium accolens ATCC 49725] Length = 268 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 109/300 (36%), Gaps = 46/300 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRL-QFMTGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I + + P H+ I L + + ++ Sbjct: 53 FMQFDQ-TIVHTHLKMEGTWAIHY--AGDRWRKPGHS-ARIVLQLAHSPRDIELV---GH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 GF+D+ + + + LGP+ D ++ + + ++ ALL+QK+VAG Sbjct: 106 WLGFVDIFDADQY--FSRIAHLGPDILDPDWDREEAVRRLRARPERSIGTALLDQKVVAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + A + P + DI +++ + I Sbjct: 164 IGNEYRAEICFLAGVHPATPVAEVDVEQVV--DIGKRIMWANRNSPIR------------ 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 + + V+G+ + C CG +I++ G R ++C +CQ Sbjct: 210 --VTTGVRRAGETTYVFGRNRKRC-RRCGTIIQKDSLGGVDRGGDEGELERIIWFCPHCQ 266 >gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] Length = 288 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 63/304 (20%), Positives = 107/304 (35%), Gaps = 41/304 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPEL EVE R+ + V + H + F + G + R Sbjct: 1 MPELAEVEFFRKLWNPGI-GAAVVRVLTHPRARVFRECEGGADELARLLTGAVLDGSEAR 59 Query: 57 AKYLLIEL--EGN--------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 K ++ +G + + +HLGM+G+ ++ S H + Sbjct: 60 GKQMIFRFRTDGGGHKCDDVYVWLGIHLGMTGALRMQGPSEQFRQTASDHLALV------ 113 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS- 165 + +++NDPR FG + + + +L PE F + +++ Sbjct: 114 --QAERVLVFNDPRMFGRVRFATGAEPPDWWI--SLPPEVVSREFTVDGVAAFLKRRSRA 169 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 +K LL Q+ GIGN E LWR+ + P + L + KL +E + V Sbjct: 170 PIKAVLLMQERFPGIGNWMADEILWRSAIHPRQLAGELTPAE------IRKLWRETRWVC 223 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 A G + D S F + + G C G + R GR+T + Sbjct: 224 EQAQATIGETYADPP----STWLFPHRWE----DGGKC-PRTGAPLVREQIGGRTTCWSP 274 Query: 286 YCQK 289 Q+ Sbjct: 275 KRQR 278 >gi|152964264|ref|YP_001360048.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151358781|gb|ABS01784.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 273 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 106/306 (34%), Gaps = 50/306 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + + L P + G ++ + R K+L Sbjct: 1 MPEGDTVYRLARRLDAGLSGRVLRAADLR-------VPRFATLDLSGARVRETVSRGKHL 53 Query: 61 LIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L L+ G ++ HL M G + + P V + T Sbjct: 54 LTRLDVEGSSLPGPATLHTHLRMDGQWSVLAPGKRLPRHLEPDVRVLLRTDGPTAVAL-- 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-----YLTHQFHKKNSNLK 168 R +++V T+ + + LGP+ D + + + + LK Sbjct: 112 -------RMPVVEVVPTAEEATV--VGHLGPDLLDATTPVDERVRAAVANLRRRPERGLK 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+ +AG+GN++ E + P + P + L +L ++ + Sbjct: 163 AALLDQRNLAGLGNLWADELCYLRGHDPWTPVGQV------PLEPLVRLAVKLLAFSV-- 214 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI-RRIVQ----AGRSTFY 283 S + + + V G+ G+PC CG I R R T++ Sbjct: 215 ------SPSGAMQVTTGDTRPGHQHWVSGRAGQPC-RRCGTTILVRAEVPGDPEQRRTWW 267 Query: 284 CTYCQK 289 C +CQ+ Sbjct: 268 CPHCQR 273 >gi|150008625|ref|YP_001303368.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] gi|149937049|gb|ABR43746.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] Length = 277 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 115/296 (38%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDIFMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 F E Y + L P D F+ Y KK+ + K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKTYFISLIGNLKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + + +L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEED------IDRLFNTVKSTLEEMTRRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|300781712|ref|ZP_07091566.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] gi|300533419|gb|EFK54480.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] Length = 282 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 103/298 (34%), Gaps = 40/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L M VT L P + G + V K+L Sbjct: 1 MPEGDSVYQLSKRL-QFMTGREVTKCSLR-------VPRFATVDFTGMTVERVWPYGKHL 52 Query: 61 LIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + + HL M G++ + H + ++ K V + L + + Sbjct: 53 FMQFGADGYEPEILHTHLKMEGTWSV-HRAGSRWKKPGHTARVVLQLADAAGDIELV--- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQK 175 G +D+ + + LGP+ F++ + + AL++Q Sbjct: 109 --GHSLGLVDVFPAVAYEEE--MGYLGPDMLAEDFDSAEAYRRILAAPEREIGRALMDQY 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 VAGIGN Y E + A + P R L + + + + K + + G Sbjct: 165 RVAGIGNEYRAEICFLAGVHPARTVGELGEEKVRSIIDISRRLMWTNKEEVKRVSTG--- 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 V G Y V+G+ +PC C +I+ G R ++C CQ Sbjct: 222 ----VKRAGETAY------VFGRNNKPC-RRCATLIKNGFLGGAGDLERVIWWCPTCQ 268 >gi|11066941|gb|AAG28771.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 241 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 94/270 (34%), Gaps = 32/270 (11%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 +K +TD+ L+ + + G+ + + R K LL L++ H Sbjct: 1 AAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKALLTHFSNGLTLYSHNQ 55 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 + G + + T I K ++Y+ ++++ Sbjct: 56 LYGVWRVIDTGEIPQT-------TRILRVRLQTADKTILLYSASD----IEMLTAEQLTT 104 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 +P L+ +GP+ D + + +N LL+Q +AG+GN E LW+ Sbjct: 105 HPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGNYLRVEILWQV 164 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 L+ K + L N + + L+ I + R + G Sbjct: 165 GLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTRGQADENKHHGAL-FR 212 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTF 282 F ++ + GE C CG +I + + R + Sbjct: 213 FKLFHRDGEAC-ERCGGIIEKTTLSSRPFY 241 >gi|326381980|ref|ZP_08203673.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326199406|gb|EGD56587.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 261 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 101/297 (34%), Gaps = 47/297 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+ P + +A G + V K+L Sbjct: 1 MPEGDTVYRTAHRLRRALAGRTLDRTDFR-------VPRYATADLSGSRAAAVRSVGKHL 53 Query: 61 LIELE----GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 I+ E +S+ HL M G + + T + P H + + + + Sbjct: 54 FIDFERPGGDEISLHTHLMMEGVWEVYRTGS--RWRRPAHTARIVLRSGEVEAVGFDL-- 109 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQK 175 ++L+ + LGP+ + ++ + + + A+L+Q+ Sbjct: 110 ------AVVELLTDPAAA----VAHLGPDLLGDDWDPARAVARLSAEPEVPIGVAVLDQR 159 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AGIGN+Y E + ++ P + D+ ++L+ + + Sbjct: 160 NLAGIGNVYRSELCFLRRIHPATPVGDVDLPKTV--DLAHRLLVDNR------------- 204 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 LR G VYG+ PC CG + R + RS + C CQ Sbjct: 205 LRAVRSTTGVTAR-GRELWVYGRDRRPC-RRCGTAVMREMLGAPPTARSVYLCPRCQ 259 >gi|19552074|ref|NP_600076.1| formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|62389737|ref|YP_225139.1| endonuclease VIII [Corynebacterium glutamicum ATCC 13032] gi|21323613|dbj|BAB98240.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium glutamicum ATCC 13032] gi|41325072|emb|CAF19553.1| ENDONUCLEASE VIII REMOVING OXIDIZED PYRIMIDINES MA [Corynebacterium glutamicum ATCC 13032] Length = 256 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 101/289 (34%), Gaps = 38/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ V + L P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRKL-QFMRGREVLETSLR-------VPSVALHDFTGQTVNRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ + H + K V + L+ N + + Sbjct: 53 FMQF-GEEILHTHLKMEGTWAV-HRKGDRWRKPGHTARVVLVLSENIEVVGHSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 GF+ + + + + LGP+ F+ + + + ALL+Q +AG Sbjct: 105 --GFVRVFPANRYSEE--IAYLGPDVLAEEFDINTARNNIASNPSRTIGEALLDQSNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E + + P + + I +L+ E + I Sbjct: 161 VGNEYRAEICFLMGVHPATQVGYVDVEKA--LKITRRLMWENRNSPIR------------ 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + V+G+ +PC C I + R ++C CQ Sbjct: 207 --VTTGVRRAGESTYVFGRNNKPC-RRCRTPIVKAELGERIIWWCPRCQ 252 >gi|331698382|ref|YP_004334621.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] gi|326953071|gb|AEA26768.1| DNA-(apurinic or apyrimidinic site) lyase [Pseudonocardia dioxanivorans CB1190] Length = 282 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 104/296 (35%), Gaps = 43/296 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L + + + R+ G + V+ K+L Sbjct: 1 MPEGDTVHLAGKRLHAALAGNRLVRGEVRHP--RWA-----EHDLAGLVVTGVASVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + S+ H M GS+ + + P+H + T+ + + Sbjct: 54 FTRFDDGRSLHSHFRMDGSWHLYRPGM--RWRRPEHEARAVLATDERVAVGFAL------ 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKI 176 ++L+ T+ + + + LGP+ D +++ A L + + + LL Q++ Sbjct: 106 --HDLELLPTAAEDR--LVGHLGPDLLDPAWDDGKAAEALRRFVSRADHEVGLVLLEQRV 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y E + +SP R L L+ + Sbjct: 162 MAGVGNLYKSEVCFLLGVSPWTPVRDLPDPMAAITLSRKLLLAN--------------AD 207 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 R GS+ + + V+ + G CL C IR Q R ++C CQ Sbjct: 208 RPEQSTTGSLRAGEAQW-VFERGGRECL-RCRTRIRTADQGDGVYARPAYWCPRCQ 261 >gi|296130989|ref|YP_003638239.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] gi|296022804|gb|ADG76040.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Cellulomonas flavigena DSM 20109] Length = 305 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 106/322 (32%), Gaps = 73/322 (22%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 + + + RF +A G+ + + K L + + VHLG+ Sbjct: 5 LVGRPLA---VSSPQGRF---AAGAARLDGRTMTSATAVGKQLFATFDTGEVLRVHLGLY 58 Query: 78 GSFIIEHT---------------------------------------------SCAKPIK 92 G++ + Sbjct: 59 GAWDLYGDVSPLGDGARARSSLGAPRVRPGAVMDAQPSTRRLRMGEGESEVAVDAGATWP 118 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA---DN 149 P V + L + + + D R +++ LGP+P D Sbjct: 119 PPPIGQVRVRLDSGS-------VVADLRGPTACEVLTADEAALVRD--RLGPDPLVVEDV 169 Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + + ++N + L++Q +VAGIGNIY E L+RA+L P R + Sbjct: 170 DTAGEVVVDRVTRRNVAVGQLLMDQAVVAGIGNIYRAELLFRARLDPWTPGRRV------ 223 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN---AFSVYGKTGEPCLSN 266 P D++ + ++ +L D + G R+ + G + VYG+ G+PC Sbjct: 224 PADVVRAVWRDWTGLLADGVRDGMILTREDLDAAGRAAAVADPTLRHWVYGRAGQPC-RV 282 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG +R A R + C CQ Sbjct: 283 CGTPVRVEEMATRKLYRCPVCQ 304 >gi|227875301|ref|ZP_03993443.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] gi|227844206|gb|EEJ54373.1| possible formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris ATCC 35243] Length = 222 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 30/226 (13%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE------ 129 MSG + A I H + +L N +++ D R FG ++ Sbjct: 1 MSGQLRL----AAGDITALPHERLRFTLDNG-----LELVFCDQRTFGHTEVRALEPTTD 51 Query: 130 -------TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 T L + + D + + ++ + +K LL+Q V+GIGN Sbjct: 52 GAPGGMGTEQALLPAGLGHIARDVLDPNLDVSWVVSRLRSSRRAIKTKLLDQATVSGIGN 111 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVH 241 IY E L+ A + P ++L + L L++ V+ A++ GG+S YV Sbjct: 112 IYADETLFAAGVHPATLAKNLSGED------LRNLLEVAASVMRHALEFGGTSFDQLYVD 165 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 G+ G F + VYG+ G+ C CGQ + +IV GR+T +C +C Sbjct: 166 SWGNPGDFASELQVYGRGGQAC-HQCGQALDKIVLDGRATVFCAHC 210 >gi|254820684|ref|ZP_05225685.1| hypothetical protein MintA_12186 [Mycobacterium intracellulare ATCC 13950] Length = 251 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 103/293 (35%), Gaps = 46/293 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAAVLREHLVGATLTRCDVR-------VPRFATVDLTGEVVDEVVSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + + + +H + + V Sbjct: 54 FIRV-GRASIHSHLKMEGSWRVGE-------RPVRVDHRARIVLETGTVRAVGV------ 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT-HQFHKKNSNLKNALLNQKIVAG 179 G +++++ + + LGP+ ++A + + + ALL+Q+++AG Sbjct: 100 DLGVLEILDRDRDGE--AVAHLGPDLLGEDWDAARAAANLMADPHRPIAEALLDQRLLAG 157 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQN---NGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + P ++ +++L+ + +G Sbjct: 158 IGNVYCNELCFVSGHLPTAPVGAIADPLRLVSRAREMLWLNRFRWNRCTTGDTRSG---- 213 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+ C C I R ++C CQ+ Sbjct: 214 --------------RQLWVYGRAGQRC-RRCATPINVDDTKERVAYWCPSCQR 251 >gi|289209423|ref|YP_003461489.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] gi|288945054|gb|ADC72753.1| DNA-(apurinic or apyrimidinic site) lyase [Thioalkalivibrio sp. K90mix] Length = 280 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 103/297 (34%), Gaps = 37/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + + + + H + VS R K+L Sbjct: 1 MPEGDTIHKLARVLGPALAGAPLESVATRARRGAVLVEHGAM------TVRRVSARGKHL 54 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 LI LE + HLGM G++ A P H + ++ Sbjct: 55 LIALEDAAGRAWRLRTHLGMYGTWHQYAPGAA--WHKPDHQAWAVL-----RLADRVLVC 107 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN---SNLKNALLN 173 PR + L E + +GP+ D + + + + + LL+ Sbjct: 108 FHPRELAWQLLSEGRADPERLD-ARVGPDLLDATVELDEVVQRIRTNCDPARPILDVLLD 166 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + AGIGNIY E L+ P+ ++ + L + + ++L + G Sbjct: 167 QSLAAGIGNIYKSEVLFLQGRYPLTPVGAITDRD------LLDIYCDSARLLRRNLKPGP 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 R D VYG+ G+ C CG + R + R+T++C CQ Sbjct: 221 RITRARAETD-------EYLHVYGRGGQAC-RTCGTPVERALLGEHLRATYWCPSCQ 269 >gi|240173489|ref|ZP_04752147.1| endonuclease VIII Nei [Mycobacterium kansasii ATCC 12478] Length = 254 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 104/295 (35%), Gaps = 49/295 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + G + +V R K+L Sbjct: 1 MPEGDTVWHTAVVLRQQLAGRTLTRCDIR-------VPRFAAVDLSGHMVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G +SI HL M GS+ + S + +H + N + V Sbjct: 54 FIRV-GGVSIHSHLKMDGSWRVAEHSV-------RVDHRARIVLEADNIRAVGV------ 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 G ++L++ + LGP+ ++A + + ALL+Q+++AG Sbjct: 100 DLGVLELLDHDNDGAV--VAHLGPDLLGEDWDAAVAAANLAADPDRPIAEALLDQRVLAG 157 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + P ++ + +L+ + AG Sbjct: 158 IGNVYCNELCFVSGHLPTAPVSAIADPQRLATRARTMLWANRFRWSRCTTGDTRAG---- 213 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---GRSTFYCTYCQ 288 VYG+ GEPC CG I + GR F+C CQ Sbjct: 214 --------------RRLWVYGRAGEPC-RRCGTCIECLHAGAGAGRVQFWCPTCQ 253 >gi|145295018|ref|YP_001137839.1| hypothetical protein cgR_0962 [Corynebacterium glutamicum R] gi|140844938|dbj|BAF53937.1| hypothetical protein [Corynebacterium glutamicum R] Length = 256 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 101/289 (34%), Gaps = 38/289 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ V + L P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRKL-QFMRGREVLETSLR-------VPSVALHDFTGQTVNRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ + H + K V + L+ N + + Sbjct: 53 FMQF-GEEILHTHLKMEGTWAV-HRKGDRWRKPGHTARVVLVLSENIEVVGHSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 GF+ + + + + LGP+ F+ + + + ALL+Q +AG Sbjct: 105 --GFVRVFPANRYSEE--IAYLGPDVLAEEFDINTARNNIASNPSRTIGEALLDQSNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E + + P + + I +L+ E + I Sbjct: 161 VGNEYRAEICFLMGVHPATQVGYVDVEKA--LKITRRLMWENRNSPIR------------ 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + V+G+ +PC C I + R ++C CQ Sbjct: 207 --VTTGVRRAGESTYVFGRNKKPC-RRCRTPIVKAELGERIIWWCPRCQ 252 >gi|152965456|ref|YP_001361240.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151359973|gb|ABS02976.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 295 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 109/298 (36%), Gaps = 44/298 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + L +LR+ P + G+++++V K++ Sbjct: 1 MPEGDTVWRTARRLHRALAGR-----ELLVSDLRW--PSLATVDLSGREVLEVVSAGKHV 53 Query: 61 LIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 L + + L++ HL M GS+ +E T H S + Sbjct: 54 LTRVAAGGDDPPLTLHSHLRMEGSWFVERTGDP---------HGRRSASGIRAVLTTAEW 104 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQ 174 + G +DLV T + + + LGP+ ++ + L ALL+Q Sbjct: 105 TAVGHKLGMLDLVSTDREAE--LVGHLGPDLLSPGWDPEEARRRLLADPARELGAALLDQ 162 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +++AG+G +Y+ EA + +L+P L G +L++L+ + Sbjct: 163 RVLAGVGTLYMAEACFLVRLTPWSPVSDLEDPEGF-LALLHRLLHVNKDRPA-------- 213 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + + ++G PCL C +R R+ FYC CQ Sbjct: 214 ------QVTTGDLRHGRQHFAHARSGLPCL-RCAGTVRVAPIGVPPQDRTAFYCPGCQ 264 >gi|25027478|ref|NP_737532.1| putative endonuclease [Corynebacterium efficiens YS-314] gi|259507116|ref|ZP_05750016.1| endonuclease VIII [Corynebacterium efficiens YS-314] gi|23492760|dbj|BAC17732.1| putative endonuclease [Corynebacterium efficiens YS-314] gi|259165394|gb|EEW49948.1| endonuclease VIII [Corynebacterium efficiens YS-314] Length = 260 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 94/289 (32%), Gaps = 36/289 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ V L P G+ + V K+L Sbjct: 1 MPEGDSVFQLSRRL-QFMRGREVLATSLR-------VPSVALHDFTGRTVHRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G++ I H + K V + L+ + + Sbjct: 53 FMQF-GEEILHTHLKMEGTWSI-HRKGDRWRKPGHTARVVLDLSGEETIEVVGHSLGFVK 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYL-THQFHKKNSNLKNALLNQKIVAG 179 F D + LGP+ F+ + + + ALL+Q +AG Sbjct: 111 VFHISDY--------PDRVAYLGPDVLAPEFDLEQAKANILARPTRPIGEALLDQSNLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN Y E + + P +L+ + T + + Sbjct: 163 VGNEYRAEICFLMGVHPATPV-ALVDIDRTLHLTRRLMWENRN---------------SP 206 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + + + V+G+ +PC CG I R ++C CQ Sbjct: 207 IRVTTGVRRAGESSYVFGRNNKPC-RRCGTRIVNAELGDRIIWWCPRCQ 254 >gi|255014423|ref|ZP_05286549.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 2_1_7] Length = 277 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 111/296 (37%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I + +K + + RF F P +S G+ ++ Sbjct: 1 MIEIPESATIGKQASETLKGKRIAHVIESNSPHRFTFYNGDPAEYSNRLVGRTVLGAQGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I ++ + +++ G + + K P+ + I +++ +Y Sbjct: 61 GAFVDILMDADTHLLIGDGTNMRYY------TSAEKAPKKYQLMIVFEDDSFLAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLNQ 174 F E Y + L P D F+ Y ++ K L + Sbjct: 115 GSIYAFKG----EFDNPYYQGSIHKLCP--LDERFDKAYFISLIRNFKKDISAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A++SP RK +L + + L ++ L + GG Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDS------LFNTVKSTLEEMTCRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G++G ++ + Y +PC CG+ I++ G S +YC +CQ Sbjct: 223 DTE--KDLYGALGNYRTILSKNTYH---DPC-PVCGERIQKEAYLGGSIYYCPHCQ 272 >gi|306834658|ref|ZP_07467747.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] gi|304569461|gb|EFM44937.1| endonuclease VIII [Corynebacterium accolens ATCC 49726] Length = 268 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 108/300 (36%), Gaps = 46/300 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M VT + P H + G V K+L Sbjct: 1 MPEGDSVLQLSRRL-QFMAGREVTGCSVR-------VPQHATVDLTGTICERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I + + P H+ I L + + ++ Sbjct: 53 FMQFDQ-TIVHTHLKMEGTWAIHY--AGDRWRKPGHS-ARIVLQLAHSPRDIELV---GH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKIVAG 179 GF+D+ + + + LGP+ D ++ + + ++ ALL+QK VAG Sbjct: 106 WLGFVDIFDADQY--FSRINHLGPDILDPDWDREEAVRRLRARPERSIGTALLDQKAVAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + A + P + DI +++ + I Sbjct: 164 IGNEYRAEICFLAGVHPATPVAEVDVEQV--LDIGKRIMWANRNSPIR------------ 209 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 + + V+G+ + C CG +I++ G R ++C +CQ Sbjct: 210 --VTTGVRRAGETTYVFGRNRKRC-RRCGTIIQKDSLGGVDRGGDEGELERIIWFCPHCQ 266 >gi|311696998|gb|ADP99871.1| endonuclease 8 [marine bacterium HP15] Length = 271 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 108/286 (37%), Gaps = 34/286 (11%) Query: 14 LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL-----EGNL 68 + + T + ++L+ F A RG+++ V R+K +L +G Sbjct: 5 IHKAVGGKTAQSVFFAFEHLK-----PFENALRGRRVERVEARSKAVLGFFEATDEDGPW 59 Query: 69 SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV 128 + H + G + KP + P N + K R+ + LV Sbjct: 60 CVYSHNQLYGKWR-----MGKPDREPSTNR-QLRFAIIGPKKAARLYSASD-----IQLV 108 Query: 129 ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGNIYV 185 + P L LGP+P + + L F + NL LL+Q VAGIGN Sbjct: 109 RPDELSEVPYLSRLGPDPLNQEVSIDQLLAVFDDKRFRGRNLGGLLLDQAFVAGIGNYLR 168 Query: 186 CEALWRAKLSPIRKTRSL-IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+ A++SP + R L + + L+Q ++ G ++ D Sbjct: 169 SEILFEARVSPRARPRDLDADQQSRLAEAILTLVQRTYRL------KGITNPPDRAERLK 222 Query: 245 SIGY--FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ Q V+ + GE C +C + + + A R +YC CQ Sbjct: 223 QEGWTFGQRRHMVFNRDGERC-HDCASPLVKTMMASRRLYYCPECQ 267 >gi|262197858|ref|YP_003269067.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] gi|262081205|gb|ACY17174.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Haliangium ochraceum DSM 14365] Length = 300 Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 110/308 (35%), Gaps = 39/308 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R+L + +T + + + + RG + K+L Sbjct: 1 MPEGDSIHKVARHLRAALGGAIITGVHVRDRGELM--------SLRGCSAEGIEAVGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G + VHLGM G + + ++N + V + + Sbjct: 53 LLRFTGGTGVRVHLGMKGRWRRFDAGDDETLENRWSRFGNRASLVLATRAAAFVCFEAAQ 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI------------------YLTHQFHK 162 L ++ ++ LGP+ A + Sbjct: 113 VEVIEALATRGSRH----VQRLGPDLLAIGGEAKGAAGGDGDADASAYAEILRRARVPWR 168 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 ++ + LL+Q + +GIGN+Y E L+ ++ P ++ +L D L L +E Sbjct: 169 RSQAVAELLLDQSVASGIGNVYKSEVLFVCRVHPWQRVDAL------EDDALLALYREAA 222 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RS 280 +++ + + G + VYG+ +PC+ CG +IR Q RS Sbjct: 223 RLMRANLPLARRATVAPERRGKGGGDLLPRYWVYGRHRKPCM-RCGAIIRVARQGDQARS 281 Query: 281 TFYCTYCQ 288 T++C CQ Sbjct: 282 TYWCPRCQ 289 >gi|296168906|ref|ZP_06850575.1| endonuclease VIII [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896375|gb|EFG76028.1| endonuclease VIII [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 251 Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 104/293 (35%), Gaps = 46/293 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + T+T + P + + G+ + +V R K+L Sbjct: 1 MPEGDTVWHTAALLRQHLVGRTLTRCDVR-------VPRYATVDLTGEAVDEVLSRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + G SI HL M GS+ + + + +H + + V Sbjct: 54 FIRV-GPASIHSHLKMDGSWRVGE-------RPVRVDHRARIVLEAGGVRAVGV------ 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAG 179 G ++++E + + LGP+ ++A + L LL+Q+++AG Sbjct: 100 DLGVLEILERDRDAE--AVAHLGPDLLGEDWDAGLAAANLAAHPDRPLAETLLDQRVLAG 157 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 IGN+Y E + + P ++ + +D+L+ + G Sbjct: 158 IGNVYANELCFVSGRLPTAPVSAVGDPHRLVSRARDMLWLNRFRWNRCTTGDTRTG---- 213 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+ C CG I R T++C CQ+ Sbjct: 214 --------------RQLWVYGRAGQRC-RRCGTRIDYDGSGDRVTYWCPPCQR 251 >gi|38233426|ref|NP_939193.1| putative endonuclease [Corynebacterium diphtheriae NCTC 13129] gi|38199686|emb|CAE49345.1| Putative endonuclease [Corynebacterium diphtheriae] Length = 268 Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 109/299 (36%), Gaps = 44/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L M+ T+T L P + + G+ I V K+L Sbjct: 1 MPEGDSVFQLARRLS-FMQGRTITHTSLR-------VPAYATMRFDGRTITKVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+ + HL M G++ + H + + K V + L + + V Sbjct: 53 FMHI-GSEILHTHLKMEGTWAV-HRAGDRWRKPGHTARVVLHLDDAPHDPIEVV----GH 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF----NAIYLTHQFHKKNSNLKNALLNQKI 176 GF+ + Q + LGP+ S+ A + + ALL+QK+ Sbjct: 107 ELGFVRVFPDHEYPQR--IAHLGPDVLSESWPTRGEAEARKRLLGQPERAIGLALLDQKV 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN Y E + + P + + + + + +L+ + I Sbjct: 165 LAGVGNEYRAEICFICGIHPATRIKDVDVDRVLS--VTRRLMWANRFSPIR--------- 213 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 + I V+G+ +PC CG +IR+ R ++C CQ Sbjct: 214 -----VTTGIRRPGETSYVFGRNHKPC-RRCGTLIRKSTLVDDPTTELERIIWWCPLCQ 266 >gi|327539149|gb|EGF25779.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 261 Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 103/287 (35%), Gaps = 29/287 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + + RF + A G+ + V K+L E Sbjct: 1 MPEGHKTHYLAREHNQRYAGERLDVSSPQGRF---SDGARAVSGRVLESVRAAGKHLFYE 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EGN + VHLG GS++ + + P V + + T+T D R Sbjct: 58 FEGNRIVHVHLGRYGSYVEQSSPPEPPQ-----GQVRLRAISPTHT-------LDLRGPS 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+++ + Q +LGP+P + + LL+Q IVAG+GNI Sbjct: 106 QCRLIDS--EDQKSICDSLGPDPLSGGKKTE-VWSAISASGKPIGGLLLDQSIVAGVGNI 162 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + EAL+ L P L + T +L + + K++ + G Sbjct: 163 FRAEALFETGLDPHIPGNKLSPDQFT------RLWKSLVKMMKLGLRHGRIITVTAKEAG 216 Query: 244 GSIGYFQ--NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F +YGKT P CG I A R +C CQ Sbjct: 217 KPLKELAGNERFRIYGKTDCP---QCGGSIAVDSVASRKMHWCPECQ 260 >gi|258651061|ref|YP_003200217.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Nakamurella multipartita DSM 44233] gi|258554286|gb|ACV77228.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nakamurella multipartita DSM 44233] Length = 312 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 111/309 (35%), Gaps = 54/309 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + + L +L A G+ + +V+ K++ Sbjct: 5 MPEGDTVLRTARRLHQALAGRELVRAELRWPSL-------GEADLAGRTVTEVAAYGKHI 57 Query: 61 LIELEG----------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 L + L++ HL M G + + H A+P +P V L Sbjct: 58 LTRIAAADPAAPGPRRPTVPAVPLTLRSHLRMEGRWYV-HARDAEPWPSPGRASVRAVLG 116 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-K 163 T G +DLV T + + LGP+ + F+ + Sbjct: 117 GAQWTAV-------GTWLGLLDLVPTEGGERE-LIGHLGPDIMADGFDPQVAADRLLVVP 168 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + LL+Q VAGIG +Y+ EAL+ K+SP + D+ L ++ Sbjct: 169 EREVGAVLLDQTTVAGIGTMYMAEALFVQKVSPWTPVAEV--------DVPALLATARRQ 220 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----R 279 +L A A S+ G+ F V+G++G PC CG +R R Sbjct: 221 LLRGAAQAVPSTT-------GNPRRGMQTF-VHGRSGRPCQ-RCGGTVRVAEIGPVDKRR 271 Query: 280 STFYCTYCQ 288 FYC CQ Sbjct: 272 PAFYCPACQ 280 >gi|154311839|ref|XP_001555248.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] gi|150850603|gb|EDN25796.1| hypothetical protein BC1G_05953 [Botryotinia fuckeliana B05.10] Length = 381 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 105/297 (35%), Gaps = 44/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV + + T+ + F F A GKK+ ++ Sbjct: 1 MPEIAEVARAVHYIRKSLVGKTLAVVKAQDDANVFGKVGTSAAEFQKALTGKKVEGAGQQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 KY + + P+ + ++ K + Sbjct: 61 GKYFW---------------------SKNEDEEEVWPPRFSKFSL---QTAGEPKVEAAF 96 Query: 117 NDPRRFGFMDLVETSLKY--QYPPLRTLGPEP-ADNS-FNAIYLTHQFHKKNSNLKNALL 172 D RRF + LV + PL+ GP+P D A +L + +KK +K LL Sbjct: 97 TDSRRFSRIRLVNCIAEAIRDTSPLKENGPDPVLDKDILTAEWLEQKLNKKQVPIKALLL 156 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L+ A+L P + + + + +L + + A+D Sbjct: 157 DQANISGIGNWVGDEILYNARLHPEQYSNTFTSEE------IKRLHTSMMYICQTAVDLL 210 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + + F++ + K G L N G+ I + GR++ QK Sbjct: 211 ADSSKFPDNW-----MFKHRWGKGKKDGPAALPN-GEKITFLTVGGRTSCVVPSVQK 261 >gi|154509232|ref|ZP_02044874.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] gi|153798866|gb|EDN81286.1| hypothetical protein ACTODO_01754 [Actinomyces odontolyticus ATCC 17982] Length = 345 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 107/364 (29%), Gaps = 94/364 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + RF +A G + V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGI---VSASSPQGRFASS---AALLDGWVMQRVRVHGKHM 54 Query: 61 LIEL------------------------------EGNL---SIIVHLGMSGSFIIEHTS- 86 I + + +HLG+ G + Sbjct: 55 FIGFVPPIEGETYEAGVALLEGAAAGSGEPILGEDAPWPDRWVHIHLGLYGWWRFNGDET 114 Query: 87 ------------------------------------CAKPIKNPQHNHVTISLTNNTNTK 110 + V + L N+ Sbjct: 115 VVDEGHGVAHRIPNVPKGEWNGHSETRWGEGFGEAKAGEWEPPEPVGAVRLRLFNDH--- 171 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNS 165 D DL+ + + LGP+P D ++ H K Sbjct: 172 ----AVADLVGPNRCDLITD--EERIKAESKLGPDPLDAGARSDAEAMERFAQVAHSKKR 225 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + +++Q I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ Sbjct: 226 AIGEIVMDQSIIAGVGNIYRADALFLAGISPHRKGANISIKRLR---ELWVLICDLMNRG 282 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + A + + + + VY +T PCL CG IR + R F+C Sbjct: 283 LAAGRLDTMDPEEAPNPPIEGDEEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCP 341 Query: 286 YCQK 289 CQ+ Sbjct: 342 SCQR 345 >gi|259909084|ref|YP_002649440.1| endonuclease VIII [Erwinia pyrifoliae Ep1/96] gi|224964706|emb|CAX56223.1| Endonuclease VIII [Erwinia pyrifoliae Ep1/96] Length = 229 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 24/245 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L +K+ +TD+ F + G++II + R K L Sbjct: 1 MPEGPEIRRAADRLEAAIKDKVLTDVWFS-----FPTLQSYQQMLVGERIISIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + I ++ +P ++ + V ++ + T ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRIINSGV-EPAQSKRVLRVRLAAADKT-----LLLYSASD 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 + L++ +P L+ GP+ D + A + + + LL+Q + Sbjct: 110 ----IQLLDAQGLDTHPFLQRAGPDVLDRALTAEQVRERLLSKRFRRRQFSGLLLDQAFL 165 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GN E LW+A+L+ K +L L L + + V + G + Sbjct: 166 AGLGNYLRIEILWQAQLAAQHKAETLSDKQ------LDALAEALLSVPRLSYHTRGQADE 219 Query: 238 DYVHI 242 ++ H Sbjct: 220 NHHHG 224 >gi|325108920|ref|YP_004269988.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] gi|324969188|gb|ADY59966.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Planctomyces brasiliensis DSM 5305] Length = 262 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 100/285 (35%), Gaps = 24/285 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE +I R K+ + + RF + GK++I + K+LL Sbjct: 1 MPEGHVIHRIAREQRKHFLQQPLAVSSPQGRF---SKEARRLNGKQLIGIDAYGKHLLYR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 +G + VHLG+ G F +P V + + T+ D Sbjct: 58 WQGGATFHVHLGLYGKFRTHEVPLPEPRGA-----VRLRIVGETHG-------FDLNGPN 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+ S + + L LG +P + + + + + LL+Q + AG+GNI Sbjct: 106 RCVLI--SAEEEKKLLSRLGADPLREDADPSASFERIQRSRAAIGTLLLDQSLFAGVGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + E L+ + P R S+ + L + + Q + Sbjct: 164 FRSEVLYVLGIHPDRPGNSI------ETEQLQTMWELFQDWFEISAKQNRIVTTREPGSR 217 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GS+ ++ E C CG+ +R R+ + C CQ Sbjct: 218 GSVSKLSREERLHIYKHENCGK-CGREVRSWSVGARTAYACESCQ 261 >gi|297170783|gb|ADI21804.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_24M16] gi|297181570|gb|ADI17755.1| formamidopyrimidine-DNA glycosylase [uncultured nuHF1 cluster bacterium HF0130_31E21] Length = 261 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 99/287 (34%), Gaps = 32/287 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R K + + + RF ++ G+ + V K+LL Sbjct: 1 MPEGHTIHRAARDHHKILAGQKLTVSSPQGRF---AEGASNLTGQLCLKVEAIGKHLLYR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + VHLG+ G KP V + L + T+ D Sbjct: 58 FNNGDVLHVHLGLFGKIRKFKLPLVKPRGV-----VRVRLVSTTHAI-------DINGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++ + +GP+ + + ++ K + +++Q ++AGIGNI Sbjct: 106 ICRVLAPQEVLT--LIDRIGPDVLRSGSDPELAFNRIKKSKLPIGRLIMDQSVMAGIGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQ--NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 Y E LWR ++ P + + + D L +++ I +D G S Y Sbjct: 164 YRSEILWRQRVHPETPGNKIDRLTFDRIWNDAKVLLAIGVKRNAIITVDDAGLSKTKY-- 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + +++ K P C IR R TF C CQ Sbjct: 222 --------KERVNIFSKDNCP---KCKGKIRSFKINARRTFVCEICQ 257 >gi|293189765|ref|ZP_06608481.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] gi|292821355|gb|EFF80298.1| DNA-formamidopyrimidine glycosylase [Actinomyces odontolyticus F0309] Length = 345 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 107/364 (29%), Gaps = 94/364 (25%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + RF +A G + V K++ Sbjct: 1 MPEGDAVRRLAGTLDELFVGGM---VSASSPQGRFASS---AALLDGWVMQRVRVHGKHM 54 Query: 61 LIEL------------------------------EGNL---SIIVHLGMSGSFIIEHTS- 86 I + + +HLG+ G + Sbjct: 55 FIGFVPPIEGETYEAGVALLEGAAAGSGEPILGEDAPWPDRWVHIHLGLYGWWRFNGDET 114 Query: 87 ------------------------------------CAKPIKNPQHNHVTISLTNNTNTK 110 + V + L N+ Sbjct: 115 VVDEGHGVAHRIPNVPKGEWNGHSETRWGEGFGEAKAGEWEPPEPVGAVRLRLFNDH--- 171 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPAD-----NSFNAIYLTHQFHKKNS 165 D DL+ + + LGP+P D ++ H K Sbjct: 172 ----AVADLVGPNRCDLITD--EERIKAESKLGPDPLDAGARSDAEAMERFAQVAHSKKR 225 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + +++Q I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ Sbjct: 226 AIGEIVMDQSIIAGVGNIYRADALFLAGISPHRKGANISIKRLR---ELWVLICDLMNRG 282 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + A + + + + VY +T PCL CG IR + R F+C Sbjct: 283 LAAGRLDTMDPEEAPNPPIEGDEEASRWYVYHRTDRPCL-RCGTPIREALMQNRRLFWCP 341 Query: 286 YCQK 289 CQ+ Sbjct: 342 SCQR 345 >gi|226227831|ref|YP_002761937.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] gi|226091022|dbj|BAH39467.1| formamidopyrimidine-DNA glycolase family protein [Gemmatimonas aurantiaca T-27] Length = 295 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 21/288 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP+V I L + + + +H + SA ++I+ V R K + Sbjct: 1 MPELPDVMIYVERLEATVVGQAPSAVRVHNPFVLRSVTPPLSAF-EHREILGVRRLGKRI 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ +++VHL ++G K + + + T + + Sbjct: 60 VLQFTEEFALVVHLMIAGRLRWRPPDKRIAGKLALAS---LEFAHGT----LYLTEAGTK 112 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 R + V+ Q G EP + L +N +K +L + ++++GI Sbjct: 113 RRASLHAVQGVPSLQ--SFDRGGLEPL--TCTVGELATVLRAENHTIKRSLTDPRLLSGI 168 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E L A+LSP+ T L + + +L +Q L D + Sbjct: 169 GNAYSDEMLHAAQLSPMVLTSRLGDED------IARLHAAMQHTLRTWTDRLRQETGN-- 220 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ F + +V+G+ G+ C C ++RI A T YC CQ Sbjct: 221 GFPETVTAFHDEMAVHGRFGKAC-PVCAAPVQRIRYADNETNYCARCQ 267 >gi|148273833|ref|YP_001223394.1| putative endonuclease VIII/DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831763|emb|CAN02732.1| putative endonuclease VIII/DNA glycosylase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 267 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 106/302 (35%), Gaps = 50/302 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T P + G+++ +V K++ Sbjct: 1 MPEGDTVWRTAAHLHEAIGGQVLTRSDFR-------VPKFATLDLAGQEVDEVVSVGKHI 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G+L+I HL M GS+ I P + P + T T + + Sbjct: 54 LHRI-GDLTIHSHLKMEGSWHIYQHGT--PWRRPAFEARVVLETAERVTVGFAL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKI 176 G ++++ + + + LGP+ + + + ALL+Q+ Sbjct: 105 --GVLEVIPRDQE--HTVVGHLGPDILGPDWGHAAAEEIVRRISAQPERAIGLALLDQRN 160 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 AGIGN+Y E + + P R + L ++ ++ + D + Sbjct: 161 AAGIGNVYRAELCFLRGVLPTRPVAEVPD--------LPAMVALARRTMRANRDRIERTT 212 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ----------AGRSTFYCTY 286 + VYG+ G+PCL CG I++ R T++C Sbjct: 213 TGDL-------RRGRTDWVYGRKGKPCL-RCGTRIQQGQLCDPVRPGMGAQDRVTYWCPR 264 Query: 287 CQ 288 CQ Sbjct: 265 CQ 266 >gi|116669188|ref|YP_830121.1| formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] gi|116609297|gb|ABK02021.1| Formamidopyrimidine-DNA glycolase [Arthrobacter sp. FB24] Length = 279 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 109/302 (36%), Gaps = 44/302 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + G + +V R K+L Sbjct: 1 MPEGDSVWRAAAQLHAALAGHQLTASDFR-------VPRFATLKLAGWTVDEVVPRGKHL 53 Query: 61 LIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + L G L+I HL M G++ + + + K + Sbjct: 54 FMRLRGPAEERLTIHSHLKMEGAWQV-YPPGGRWRKPGFTARCVLRTATADAVGFS---- 108 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQK 175 G +++V T+ + + LGP+ ++ + + + ALL+Q+ Sbjct: 109 -----LGILEVVRTADEDSV--VGHLGPDLLGPDWDMAEAERRLRAAPDVPIGVALLDQR 161 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 +AGIGNIY CEA + + + P + L ++ +++L + G + Sbjct: 162 NLAGIGNIYRCEACFLSGIHPAAPVSEVTD--------LAAMMTTAKQLLEANLGPGRRT 213 Query: 236 LRDYVHIDGSI-GYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQA------GRSTFYCTY 286 ++ G G + VY + +PCL CG IR V A R ++C Sbjct: 214 TV--LNPRGMPVGRMAGRPGYWVYRREHQPCLK-CGTPIRHGVLAKGAGTEERDIYFCPS 270 Query: 287 CQ 288 CQ Sbjct: 271 CQ 272 >gi|325002792|ref|ZP_08123904.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudonocardia sp. P1] Length = 275 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 94/297 (31%), Gaps = 43/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L + + L L G + V+ K+L Sbjct: 1 MPEGDTVYLAAVRLHAALAGHELLRGELRHPRLV-------EHDLAGLTVTGVAPVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + S+ H M G++ + + Sbjct: 54 FTRFDDGRSLHSHFRMDGAWHLYRPGM------------RWRRVAHEARAVLETRERVAV 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF----NAIYLTHQFHKKNSNLKNALLNQKI 176 F DL ++ + LGP+ D + A L + + L LL Q++ Sbjct: 102 GFALHDLELLPTADEHTLVGHLGPDLLDPDWGAGHEAEALRRMSARGDHELGLVLLEQRV 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN+Y + +R L+P R + G L + + K + G + Sbjct: 162 MAGLGNLYRNDICFRLGLTPWVLVRDVPDLPGVI--ALSRTLLSSNKDRPEQTTTGSLAA 219 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 A V+ ++G PC CG IR Q R T++C CQ+ Sbjct: 220 -------------GEAHWVFERSGRPC-RRCGTRIRTADQGEPPRDRVTYWCPRCQR 262 >gi|309774801|ref|ZP_07669823.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] gi|308917486|gb|EFP63204.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 3_1_53] Length = 273 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 36/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I ++L T+ I + + +F F P + +G+ I + R Sbjct: 1 MIELPEARTIAKDLRKCCIGKTIQSISGNFTDHKFTFYYGDPDTYHELLKGRSITAIIDR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ +E+E N ++ G + + + + + + ++ T+ + +Y Sbjct: 61 NFYVELEIE-NFVLVFRDGANIRWY-------AQPRAFKKSKLLLTFTDGSCLNITTSMY 112 Query: 117 NDPRRF----GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNA 170 F G+ D T + P D +F ++ +++ +K Sbjct: 113 AVISVFSKAVGWQDTYYTKELHSLS--------PLDPNFTLETFLNEINEETEKLSIKAF 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L Q+ +GIGN + L+ A L P RK +L + + L I+ L +D Sbjct: 165 LTTQQRFSGIGNGVCQDILFHAGLHPKRKVHTLTGDERSS------LFLSIKHTLQRMVD 218 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG + + GY S + G P CG I++ G S +YC CQK Sbjct: 219 DGGRDTEKTI-FNEKGGYHTIMSSRHFLEGCP---KCGGTIQKEQYMGGSIYYCPSCQK 273 >gi|170780851|ref|YP_001709183.1| DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] gi|169155419|emb|CAQ00526.1| DNA glycosylase [Clavibacter michiganensis subsp. sepedonicus] Length = 267 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 107/302 (35%), Gaps = 50/302 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V +L + +T P + + G+++ +V K++ Sbjct: 1 MPEGDTVWRTATHLHEAIGGQVLTRSDFR-------VPKYATLDLAGQEVDEVVSVGKHI 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + G+L+I HL M GS+ I A + P + T T + + Sbjct: 54 LHRV-GDLTIHSHLKMEGSWHIYQHGTA--WRRPAFEARVVLETAERVTVGFSL------ 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKI 176 G ++++ + + + LGP+ + + + + ALL+Q+ Sbjct: 105 --GVLEVIPRDQE--HTVVGHLGPDILGPDWGDEAAEEIVRRIAAQPDRAIGLALLDQRN 160 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 AGIGN+Y E + + P R R + L +I ++ + D + Sbjct: 161 AAGIGNVYRAELCFLRGVLPTRPVREVPD--------LPAMIALARRTMRANRDRIERTT 212 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----------GRSTFYCTY 286 + VYG+ G+ CL CG I + R T++C Sbjct: 213 TGDL-------RRGRTDWVYGRKGKACL-RCGTRILQGQLGDPVRPGMGAQDRVTYWCPR 264 Query: 287 CQ 288 CQ Sbjct: 265 CQ 266 >gi|227497434|ref|ZP_03927666.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] gi|226833110|gb|EEH65493.1| possible DNA-(apurinic or apyrimidinic site) lyase [Actinomyces urogenitalis DSM 15434] Length = 360 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 112/373 (30%), Gaps = 103/373 (27%) Query: 4 LPEVEIIRR---NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE I R L + + + RF +A G+ ++ K+L Sbjct: 1 MPEGHTIHRLAAALSELFGGQRL---HVSSPQGRF---AAGAARLDGQVLVGAEAHGKHL 54 Query: 61 LIEL-------------------------------------EGN---LSIIVHLGMSGSF 80 + +G + +HLG+ GS+ Sbjct: 55 FVAFAPQADIPFELPGAGSVRAGSGQARARRLTESADCLPADGPAPVTWLRIHLGLYGSW 114 Query: 81 IIEHTSCAKPIKNPQHNHVTI------SLTNNTNTKKYRVI------------------- 115 + S + +L + + + Sbjct: 115 TFDGDSTFTAPHAIGAPRRRVGERGEHALAHGGGSALSGLSGGQDDAAGLPAEPSPGQWQ 174 Query: 116 -----------------YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH 158 D ++++ Q R LGP+P + Sbjct: 175 APEPRGAVRVRLEGDHGVADLTGPAACEILDACGVAQVR--RRLGPDPLRPDGDPQVFVD 232 Query: 159 QFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 ++ + L++Q +++G+GNIY E+L R +SP + + L+ L Sbjct: 233 AVRRRRKAVGELLMDQSVISGVGNIYRAESLLRRGVSPFVPGNRVSEKR------LHGLW 286 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN---AFSVYGKTGEPCLSNCGQMIRRIV 275 +++ ++ + G + + + + + VY +TG PCL CG + Sbjct: 287 EDLVPLMEYGVATGFITTVEPEDVPEPVPAGDEEAARWYVYHRTGRPCL-RCGTPVSERE 345 Query: 276 QAGRSTFYCTYCQ 288 AGR F+C CQ Sbjct: 346 VAGRRLFWCPRCQ 358 >gi|156060539|ref|XP_001596192.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980] gi|154699816|gb|EDN99554.1| hypothetical protein SS1G_02408 [Sclerotinia sclerotiorum 1980 UF-70] Length = 389 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 110/297 (37%), Gaps = 38/297 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV ++ + T+ + F F A GKK+ D Sbjct: 1 MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKVDD---- 56 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+L G + L GS K + P+ + ++ K + Sbjct: 57 --YVLAATSG-----ISLRHDGS----KDEGEKEVWPPKFSKFSL---QTAEEPKVDAAF 102 Query: 117 NDPRRFGFMDLVET--SLKYQYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNLKNALL 172 D RRF + LV+ PL+ GP+P + A +L + +KK +K LL Sbjct: 103 TDSRRFSRIRLVDCVAGAIRNTTPLKENGPDPVIDKDILTAEWLEQKLNKKQVPIKALLL 162 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q ++GIGN E L+RA+L P + + + + +L + + A+D Sbjct: 163 DQANISGIGNWVGDEILYRARLHPEQYSNTFSSEE------IKRLHASMMYICQTAVDLL 216 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 S + F++ + GK P G+ I + GR++ QK Sbjct: 217 ADSSKFPDDW-----MFKHRWG-KGKKDGPTALPNGEKITFLTVGGRTSCVVPSVQK 267 >gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] Length = 390 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 39/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 MPE+ EV L + T+ + F F A +G+ Sbjct: 1 MPEIAEVARCVHFLRHHLVGRTIAKATAPEDDKVFGKVGTSGPAFEKAVQGR-------- 52 Query: 57 AKY-LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 KY + ++G+ + ++ + + P++ + T K V Sbjct: 53 -KYPGWVHIKGDKTAYT------NYYKKMKPEEADLWPPKYWKFRL---ETEGTPKVEVA 102 Query: 116 YNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNS--FNAIYLTHQFHKKNSNLKNAL 171 + DPRRFG + LV+ ++ PL GP+P ++ F Y+ + ++ +K L Sbjct: 103 FTDPRRFGRVRLVDCPGDDIRKHTPLVENGPDPVVDAAIFTEEYMRSKMTSRHVPIKALL 162 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L+Q ++GIGN E L++A + P + + + ++++ V A+D Sbjct: 163 LDQTHISGIGNWVADEVLYQANVHPEQYCDDFSDRE------IKAIYEKVRYVCQTAVDK 216 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G S F+ + GK L N G+ + I GR++ Y QK Sbjct: 217 LGDSDEFPEDWL-----FKYRWGKGGKDAVSKLPN-GEKLAFITVGGRTSCYAPSRQK 268 >gi|88854733|ref|ZP_01129399.1| DNA glycosylase [marine actinobacterium PHSC20C1] gi|88815894|gb|EAR25750.1| DNA glycosylase [marine actinobacterium PHSC20C1] Length = 272 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 108/307 (35%), Gaps = 53/307 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T P + G+ + V R K+L Sbjct: 1 MPEGDSVYKAAAKLRAALDGQVLTRTDFR-------VPAFATLDLSGQTVTSVVPRGKHL 53 Query: 61 LIELE------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTN 108 LI + +I HL M G + I + + + P + + T + Sbjct: 54 LIRVAEDADASSSREPGSGHTIHSHLKMEGVWQIY--ANGERWRKPAYLARAVLSTASKT 111 Query: 109 TKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNL 167 + + G +++V T+ + + LGP+ ++A L + + Sbjct: 112 AVGFEL--------GLLEVVPTASEDSI--VGHLGPDLLGPDWDADLALANLLSDPARPV 161 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 ALL+Q+ +AG+GN+Y E + P + PK ++ + I Sbjct: 162 ALALLDQRNLAGLGNVYANELSFLRGFRPDTPIGEVAD----PKRLVALAHKAISVNK-- 215 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTF 282 R ++ G ++ + V+G+ G+ CL CG I R T+ Sbjct: 216 --------DRPIRNLTGLP-RGKSRYWVHGRRGDACL-RCGTRIESAQLGTGPTDTRFTW 265 Query: 283 YCTYCQK 289 +C CQK Sbjct: 266 WCPSCQK 272 >gi|318078894|ref|ZP_07986226.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 210 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 18/211 (8%) Query: 79 SFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 + P K + + + L + + + + ++ + +V+ P Sbjct: 1 WLRWQAKVPDTPPKPGRGPLALRLVLDDGSG---FDLTEAGTQKRLAVYVVDDP--RTVP 55 Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 + LGP+P F+ + LK AL +Q +VAG+GN Y E L AKLSP Sbjct: 56 GIARLGPDPLAPGFDRAAFAELLRGERRQLKGALRDQSLVAGVGNAYSDEILHAAKLSPF 115 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 + L + + +L + ++ L +A+ + + G V+G Sbjct: 116 KNAGRLTEEETS------RLYEALRTTLTEAVARSRGIAAGSLKAEKKSG-----LRVHG 164 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TGEPC CG IR + A S YC CQ Sbjct: 165 RTGEPC-PVCGDTIREVSFADSSLQYCPTCQ 194 >gi|308176221|ref|YP_003915627.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307743684|emb|CBT74656.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 274 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 53/306 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + L P + G ++ +V R K+L Sbjct: 1 MPEGDSVYRATARLHQALAGEVLLASDLR-------VPALATVDVAGYEVREVIPRGKHL 53 Query: 61 LIELEGN-----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+ L+ L++ HL M G + + + + K P H + T Sbjct: 54 LMRLQPPARANPDFAQPALTLHSHLLMEGRWDLY--APGERWKRPAHTARVVLQTARITA 111 Query: 110 KKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLK 168 + + + L+ T + + LGP+ ++A + + Sbjct: 112 VGFDI--------AQVKLLPTEQEADV--VGHLGPDLLGVDWDAQVALENLRAEPQLGIG 161 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+I+AG+GN+Y E L+ +++ P+ R + QN D+ ++L+ + Sbjct: 162 QALLDQRIMAGVGNVYRSEILFLSRVHPLTAVREV-QNLPALIDLAHRLLVVNKD----- 215 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG------RSTF 282 R G G ++ VYG+ +PCL CG I + A R + Sbjct: 216 --------RPRRVTTGQPGT-RDPLWVYGRAAKPCL-RCGTRIELLRIASTPTGIERDCY 265 Query: 283 YCTYCQ 288 C CQ Sbjct: 266 LCPSCQ 271 >gi|54022944|ref|YP_117186.1| putative endonuclease VIII [Nocardia farcinica IFM 10152] gi|54014452|dbj|BAD55822.1| putative endonuclease VIII [Nocardia farcinica IFM 10152] Length = 259 Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 100/301 (33%), Gaps = 59/301 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + T+ P + + G+++ +V+ K+L Sbjct: 1 MPEGDTVFRAAHRLHLALAGKTLVRSDFR-------VPRYATVDLVGERVEEVTSYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + SI HL M G + + P+ + T++T + + + Sbjct: 54 FIRT-ADASIHTHLKMEGVWR--TYCVGERWTRPRVQARVVLTTDDTEAVGFALGKVEVL 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R ++ + LGP+ ++ + + ALL+Q+ +AG Sbjct: 111 RRA----------DEHTVIDHLGPDLLGPDWDPAEAERRLASVPERPIGLALLDQRNLAG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGNIY E + ++ P ++ + L + Sbjct: 161 IGNIYRSEICFLRRVHPATPVAAVPDLPAVVSEAHRVLGAAAHQ---------------- 204 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR------------RIVQAGRSTFYCTYC 287 VYG+TG PC CG I+ RIVQ R F+C C Sbjct: 205 ---------PPWRPMVYGRTGLPC-RRCGTRIQARPLGEPTPVSDRIVQRERGIFFCPRC 254 Query: 288 Q 288 Q Sbjct: 255 Q 255 >gi|297196039|ref|ZP_06913437.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153040|gb|EFH32113.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] Length = 204 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 20/223 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-PHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE R L + + + +H + A +G++ + +R K+ Sbjct: 1 MPELPDVEGFREVLDSCARGKRIERVEVHDAGVLHGVTVARLGRALQGRRFAEPARHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL + ++++H GM+G + H+ V ++L + + + D Sbjct: 61 LLARTD-GPTLMMHFGMTGQLVCCRAGDPPD----PHDRVVLAL------GREELRFRDQ 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L E L GP+ S + ++ +K AL +Q ++AG Sbjct: 110 RKLQGLWLAEDPDADVARILHGQGPDAL--SLDRAAFKDLLSRRRGRVKAALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 +GN+ E LWRA L P R+ L L +L E++ Sbjct: 168 LGNLLADEILWRAGLRPTRRADRLDDAE------LGRLHSEMR 204 >gi|48243750|gb|AAT40850.1| putative formamidopyrimidine-DNA glycosylase [Haemophilus influenzae] Length = 116 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K L++ +V G+GNIY E L+ L P + SL + +L+++I++VL + Sbjct: 1 KTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQ------CGQLVEQIKQVLSN 54 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 AI GG++L+D++ DG GYF VYG +PC CG I +V R++FYC C Sbjct: 55 AIQQGGTTLKDFLQPDGHPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKC 113 Query: 288 QK 289 QK Sbjct: 114 QK 115 >gi|297181460|gb|ADI17648.1| formamidopyrimidine-DNA glycosylase [uncultured alpha proteobacterium HF0130_20P23] Length = 261 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 103/285 (36%), Gaps = 28/285 (9%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + RF ++ G+ I V K+LL Sbjct: 1 MPEGHTIHRAARDHRRIFAKCALEVESPQGRF---SEGASILSGQLCITVEAFGKHLLYR 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + NL++ +HLG+ G KP V + L T+ D Sbjct: 58 FDNNLALHIHLGLFGRIRKHKLPLQKPRGA-----VRVRLIGRTHAV-------DINGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +++++ + +GP+ + N + K + +++Q ++AGIGNI Sbjct: 106 ICRVLDSNAVTT--LINRIGPDVLRSDSNPELAFAKITKSKVPIGQLIMDQSVMAGIGNI 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 Y E LWR + P R + + + +L E + +L + D Sbjct: 164 YRSEILWRQSVHPETPGREINR------ETFDQLWDEAKALLKIGVKHNAIITVDTAKPS 217 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + ++ +++ K P C IR +GR F C CQ Sbjct: 218 KT--RYKERVNIFAKDQCP---RCKNEIRCFEISGRRAFVCDICQ 257 >gi|300788843|ref|YP_003769134.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] gi|299798357|gb|ADJ48732.1| formamidopyrimidine-DNA glycosylase [Amycolatopsis mediterranei U32] Length = 257 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 110/285 (38%), Gaps = 37/285 (12%) Query: 10 IRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGN- 67 + R ++ + + H R P + A RG ++ + RR K L E EG Sbjct: 3 LARQVLAGALGRKIRSVDDHDDWVCRPHAPGDIATALRGGRLTEAHRRGKTLWCETEGGD 62 Query: 68 ----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 ++ +HLGM+G S + T ++ D RR Sbjct: 63 GRPGPNLGLHLGMAGQLRFAGESGPPGRIRDRDEKPEWFRFGITFADGEQLRLFDTRRLS 122 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 + L P L LGP+ + S + + + LK LL+Q +VAGIGN+ Sbjct: 123 RVRL--------DPDLDALGPDAGEIS--RRDFAERVGRGRAPLKARLLDQSVVAGIGNL 172 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E LW+A LSP R + D L L + ++K L AI GG VH Sbjct: 173 LADETLWQAALSPARPVHEMS------SDDLGHLHKALRKALRAAIRHGG------VHTG 220 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 IG + + GE C CG + GRST++C+ Q Sbjct: 221 EIIG--------HRRAGEHC-PRCGAEMSHGTVGGRSTWWCSKEQ 256 >gi|32477685|ref|NP_870679.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32448239|emb|CAD77756.1| probable formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 294 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 105/287 (36%), Gaps = 29/287 (10%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + + + RF + A G+ + V K+L E Sbjct: 34 MPEGHKTHYLAREHNQRYAGERLDVSSPQGRF---SDGARAVSGRVLESVRAAGKHLFYE 90 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 EGN + VHLG GS+ +E TS +P + V + + T+T D R Sbjct: 91 FEGNRIVHVHLGRYGSY-VEQTSPPEPPQG----QVRLRAISPTHT-------LDLRGPS 138 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 L+++ + Q +LGP+P + + LL+Q IVAG+GNI Sbjct: 139 QCRLIDS--EVQKSICDSLGPDPLSGGKKTE-VWSAISASGKPIGGLLLDQSIVAGVGNI 195 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 + EAL+ L P L + T +L + + K++ + G Sbjct: 196 FRAEALFETGLDPHIPGNKLSPDQFT------RLWKSLVKMMKLGLKHGRIITVTAKEAG 249 Query: 244 GSIGYFQ--NAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + F +YGK P CG I A R +C CQ Sbjct: 250 KPLKELAGNERFRIYGKMDCP---QCGGSIAVDSVASRKMHWCPECQ 293 >gi|300932652|ref|ZP_07147908.1| putative endonuclease VIII [Corynebacterium resistens DSM 45100] Length = 289 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 104/308 (33%), Gaps = 47/308 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TVT + P +A G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVTHTDIR-------VPRFATATLNGQQVQRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G+ + HL M G + I H + ++ K + + T I Sbjct: 53 FMQI-GDTIVHTHLKMEGVWAI-HKAGSRWRKPGYTARIVLRFT--PQHPGGAEIEIVGH 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT----HQFHKKNSNLKNALLNQKI 176 GF+ L + + LGP+ D ++ L + L ALL+Q Sbjct: 109 ELGFVRLYPAGEYQRV--ISDLGPDILDPAWLEEGLAECVRRIMKRPERALGAALLDQSN 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y E L+ P + L + + ++ I G Sbjct: 167 VAGIGNEYRAEILFLLGWHPAIPVGEVGTAGVERALRLSRRVMWENRLEPVRIFTG---- 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---------------RST 281 D G V+G+ + C CG IR+ G R Sbjct: 223 ------DKRPGM---GTYVFGRANKAC-RRCGHAIRKGTLGGKFAGGDANLDVAELERII 272 Query: 282 FYCTYCQK 289 ++C CQ+ Sbjct: 273 WWCPSCQQ 280 >gi|312195439|ref|YP_004015500.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Frankia sp. EuI1c] gi|311226775|gb|ADP79630.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Frankia sp. EuI1c] Length = 278 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 110/297 (37%), Gaps = 42/297 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + ++ P + + G +++V R K+L Sbjct: 1 MPEGDTVLQASRRLHQALAGQVLSVSDFR-------VPRYATVDLTGGTVLEVVPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+ G +++ HL M G++ + A + + L N + Sbjct: 54 LMRCSGGVTVHSHLRMEGAWRVFAAGEA--WRGGPGWQIRAVLGNARHVAV-------GY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY-LTHQFHKKNSNLKNALLNQKIVAG 179 R +D++ T+ + + + LGP+ ++ L + + + LL+Q ++AG Sbjct: 105 RLPVLDVLRTADESKV--VGHLGPDVLGPDWDLARVLANARTHPEREIGSVLLDQTVLAG 162 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN+Y EA + A LSP + + + + ++ ++ Sbjct: 163 LGNVYRIEACFVAGLSPWTRIGDVPELDSVVDRARQLIVLNAER---------------P 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-------GRSTFYCTYCQK 289 V + VYG+ P CG IR QA GR T++C CQ+ Sbjct: 208 VRVTTGSARPGEQLWVYGRGRRP-CRRCGTAIRMAEQAPSDAPEEGRVTYWCPRCQR 263 >gi|296129387|ref|YP_003636637.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulomonas flavigena DSM 20109] gi|296021202|gb|ADG74438.1| DNA-(apurinic or apyrimidinic site) lyase [Cellulomonas flavigena DSM 20109] Length = 272 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 103/312 (33%), Gaps = 71/312 (22%) Query: 4 LPEVEIIRRN---LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE +++RR L + + R +LR+ + G+ ++ K+L Sbjct: 1 MPEGDVLRRTAAHLDRALAGRRLV-----RADLRWPTAA--TVDLVGRTVLGTRPYGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + ++ HL M G++ + ++ + ++ T Sbjct: 54 LTRFDDGRTLHTHLRMDGTWRLVPSTDRRAAARSPEVRAVLASDGWT---------AVGY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN--------------------AIYLTHQF 160 R G +D+V TS + L LGP+ D F+ L Sbjct: 105 RLGMLDVVPTSTE--GTLLGHLGPDVLDGDFDTTPGVPWAGPPVLDLPVPGIDEALRRWA 162 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + + LL+Q++V GIG I++ E+L+ P + + L + Sbjct: 163 AQGPRPVAEVLLDQRVVVGIGTIFMAESLFARGWWPWAPADRVTDAAEVLRAARALLRES 222 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--- 277 + + +VYG+ G C + CG + R Sbjct: 223 VATGRPAS-------------------------AVYGREGRTC-TRCGARVARHDVGAPP 256 Query: 278 -GRSTFYCTYCQ 288 R ++C CQ Sbjct: 257 TQRQAYWCPGCQ 268 >gi|312601525|gb|ADQ90780.1| DNA glycosylase [Mycoplasma hyopneumoniae 168] Length = 159 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 9/163 (5%) Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 + + L ++ PL+ L PEP + + K + ++K LL+QKI++G+GNIY Sbjct: 2 IRDVELLFKTKPLKDLAPEPFFIKVDD--FYQKIRKSSRSIKAILLDQKIISGLGNIYAD 59 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E + K+ P + + + + +I +K+L ++I GGSS+ Y ++ Sbjct: 60 EVCFATKIFPGKAAKLISRKEA------ELIIDFSKKILQESIKLGGSSISSYTSLNAKE 113 Query: 247 GYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G FQN V+ K PC SNC I + V AGR T++C +CQK Sbjct: 114 GKFQNFLKVHTKQNFPC-SNCQTKILKTVIAGRGTYFCPFCQK 155 >gi|323173227|gb|EFZ58856.1| putative formamidopyrimidine-DNA glycosylase [Escherichia coli LT-68] Length = 111 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY E+L+ A + P R SL L + I+ VL+ +I+ Sbjct: 1 MDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAE------CELLARVIKAVLLRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC CQK Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 111 >gi|320096121|ref|ZP_08027719.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] gi|319976942|gb|EFW08687.1| DNA-(apurinic or apyrimidinic site) lyase [Actinomyces sp. oral taxon 178 str. F0338] Length = 345 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 109/364 (29%), Gaps = 97/364 (26%) Query: 4 LPEVEIIRR---NLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 +PE + IRR L + T + RF +A G + V K++ Sbjct: 1 MPEGDAIRRLAGTLDELFVGGT---VSASSPQGRFASS---AARLDGWVVQRVRVHGKHM 54 Query: 61 LIEL----------------------EGNLSI-----------IVHLGMSGSFIIEHTS- 86 I G + +HLG+ G + Sbjct: 55 FIGFVPPVPGRSYEAGVALLEGAAAGSGEPVLGEGEPWPDQWVHIHLGLYGWWRFNGDET 114 Query: 87 ------------------------------------CAKPIKNPQHNHVTISLTNNTNTK 110 + V + L N+ Sbjct: 115 VVDEGHGVAHRIPNVPKGQWNGHSETRWGDGFGEARAGEWEPPEPVGAVRLRLFNDH--- 171 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA-----DNSFNAIYLTHQFHKKNS 165 D +L+ + LGP+P ++ A H K Sbjct: 172 ----AVADLVGPNRCELISDQERAAAE--ARLGPDPLDAGARADAEAAERFARVAHSKRR 225 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + +++Q I+AG+GNIY +AL+ A +SP RK ++ L+ LI ++ Sbjct: 226 AIGEIVMDQSIIAGVGNIYRADALFLAGISPHRKGANVSLKRLRG---LWVLICDLMNRG 282 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 + A + + + VY +TG PCL CG IR + R F+C Sbjct: 283 LAAGRLDTMDPDEAPDPPIEGDEEASRWYVYHRTGRPCL-RCGTPIREALMQNRRLFWCP 341 Query: 286 YCQK 289 CQK Sbjct: 342 GCQK 345 >gi|119716555|ref|YP_923520.1| formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] gi|119537216|gb|ABL81833.1| Formamidopyrimidine-DNA glycolase [Nocardioides sp. JS614] Length = 268 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 99/300 (33%), Gaps = 47/300 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + + L P H + G +++ R K+L Sbjct: 1 MPEGDAVWRTAERLRRALDGQRLVRTDLR-------VPQHATTDLSGGTVLETVSRGKHL 53 Query: 61 LIELEG-------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 L + + ++ HL M GS+ + + P H + + ++ Sbjct: 54 LTRINTHSDHGAEDWTLHTHLKMEGSWRVYR--AGERWTKPAHLARVVLDVGGRSAVGFQ 111 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALL 172 + G +DL+ + + + LGP+ ++A + L ALL Sbjct: 112 L--------GVVDLLPREREDEV--VGHLGPDLLGPDWDAEEAVRRLTADPTRPLGEALL 161 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q+ +AGIG IY E + P + + L + + + + G Sbjct: 162 DQRNLAGIGTIYRSELCFLTGYDPRDPLA--VVADPLRMVRLARSMLDQNRHQAQICTTG 219 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 + VYG++GE CL CG I R ++C CQ Sbjct: 220 -------------DKRRGRSLWVYGRSGERCL-RCGTTIVHDQLGQPGRERIAYWCPSCQ 265 >gi|269795617|ref|YP_003315072.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] gi|269097802|gb|ACZ22238.1| formamidopyrimidine-DNA glycosylase [Sanguibacter keddieii DSM 10542] Length = 260 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 108/298 (36%), Gaps = 53/298 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R L + +T L NL A G ++ K++ Sbjct: 1 MPEGDTVFLTARRLDEALSGTVLTWAELRWPNLDPT-------ALAGTTVLRSRAYGKHV 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L ++ ++ HL M G++ + T A + ++ T Sbjct: 54 LTTVDSGWTLHTHLRMDGTWRVHRTDPAARLARRPTVRAVLANETWTCVGD--------- 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF--NAIYLTHQFHKKN----SNLKNALLNQ 174 R G MDLV T + ++ L LGP+ F + L + + LL+Q Sbjct: 105 RLGMMDLVRT--RDEHTLLDHLGPDILAPDFGSSPDGLAAVLRTYQAQGARPVGDCLLDQ 162 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AG+G ++ E L+ ++ P + L L+ I++ L+ + Sbjct: 163 TLMAGVGTLFAAEGLFDRQVWPWTPAAEVD---------LVPLLGSIRRNLLRGVA---- 209 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR----IVQAGRSTFYCTYCQ 288 +DG + V+ ++G PC CG I R + R FYC CQ Sbjct: 210 -----RPVDGRV------VHVHSRSGSPC-HRCGTTIVRGLAGVAPMERPMFYCPVCQ 255 >gi|255531639|ref|YP_003092011.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] gi|255344623|gb|ACU03949.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] Length = 258 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 102/283 (36%), Gaps = 32/283 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ NL K+ T+ + + G ++ V R K + Sbjct: 1 MPELPDLEVFAANLEKRFKHKTLERLEVQVAKKLNVPEKELKETLEGHQLTAVKREGKTI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + +HL + G+ + ++ V+ Sbjct: 61 QLHFGPERILGLHLMLHGALNLIEADEKI-----KYPIVSFHFKTGHG------------ 103 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 F D + + P + + P+ + YL KK + +K L++Q ++ GI Sbjct: 104 -FALTDFQKAATLTLNPVVSDV-PDALSKEMSVNYLEAVLAKKKAPIKTVLMDQHLIRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW A +SP + PK + +L Q I K+L I L D + Sbjct: 162 GNTYADEILWEAGISPF------SVSKAIPKAKVRELHQVIGKLLRKEIQQISKMLPDEL 215 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 G ++ ++G G G+ I GR ++Y Sbjct: 216 G-----GEIKDFLKIHG-AGIKESPT-GKKILVEEIGGRKSYY 251 >gi|229820940|ref|YP_002882466.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] gi|229566853|gb|ACQ80704.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Beutenbergia cavernae DSM 12333] Length = 267 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 111/298 (37%), Gaps = 41/298 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + +T L +L A G + + K+L Sbjct: 1 MPEGDVLLRVARRLTSALDGAALTHAELRWPSL-------GGADLVGVRSLGTVSVGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS-CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L + ++ HL M G++ +E T A+ + V L T + + D Sbjct: 54 LTRFDDGRTLHTHLRMDGTWRVEPTERVARTPALARRTAVRAVL----GTPSWTCLGMD- 108 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQK 175 G MDLV T + + LGP+ + + A + L++Q+ Sbjct: 109 --LGMMDLVRTRDEASV--VGHLGPDVVGDDYEAHGRAAIVAGIAAQGTRPIGEILIDQR 164 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 ++AGIG IY+ E+L+R ++ P R + D + L+ + +++ S+ Sbjct: 165 VLAGIGTIYLAESLFRHRIRPWRPANEV--------DDVGSLVDTARALML------ASA 210 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 V G + V+G+ G C CG I R FYC CQ+ Sbjct: 211 NSPRVTATGDTRAGRGTL-VHGRAGRSC-PRCGTAIAVAAVGTPPYDRPAFYCPDCQR 266 >gi|319442584|ref|ZP_07991740.1| putative endonuclease VIII [Corynebacterium variabile DSM 44702] Length = 301 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 95/294 (32%), Gaps = 46/294 (15%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 M T+T + P + G+ + +V K+L +++ G + HL Sbjct: 31 QWMGGRTLTRSDIR-------VPRFATEDLTGRTVTEVWPYGKHLFMDI-GGRVLHTHLK 82 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M G + I + + P H + L I GF+ L + + Sbjct: 83 MEGVWSIH--TAGTRWRRPGHT-ARVVLGFAPQHAGGPEIEVVGHSLGFVRLFDRDRYGE 139 Query: 136 YPPLRTLGPEPADNSF----------NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + LGP+ + L + ++ ALL+Q+ VAGIGN Y Sbjct: 140 V--VAHLGPDILAPDWASTPPDGHSGRDEALRRILARPERSIGAALLDQRNVAGIGNEYR 197 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 E + + P R + + L + + + ++ D G+ Sbjct: 198 AEVCFLGGVDPRRPVGT---GEVATTTAAHLLDLSRRVMWENRLEPRRLFTGDRRPGMGN 254 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 V+G+ + C CG I + G R ++C CQ Sbjct: 255 --------YVFGRAEKAC-RRCGSPIMKSFLGGVDADGDEGELERVIWWCPVCQ 299 >gi|311740895|ref|ZP_07714722.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] gi|311304415|gb|EFQ80491.1| endonuclease VIII [Corynebacterium pseudogenitalium ATCC 33035] Length = 272 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 106/300 (35%), Gaps = 46/300 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + + G V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMAGREVTGCSVR-------VPRYATVHLDGMVCERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I H + + K + + L N R I Sbjct: 53 FMQFDQ-AIVHTHLKMEGTWAI-HYAGDRWRKPGHTARIVLQLAN-----SPRDIEVVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 + GF+D+ + + + LGP+ D ++ + + + ALL+QK+VAG Sbjct: 106 QLGFVDIYP--ADHYHQRIAHLGPDILDPEWDREEALRRLNSRPQRAIGAALLDQKVVAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y EA + A + P + DI +++ + Sbjct: 164 IGNEYRAEACFLAGVHPATPVAEVDTAR--ILDISRRIMWANRT--------------SP 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 V + + V+G+ + C CG I + G R ++C +CQ Sbjct: 208 VRVTTGVRRAGETTYVFGRNRKRC-RRCGTFIIKGALGGVDQGGDEGELERIIWWCPHCQ 266 >gi|239916878|ref|YP_002956436.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|281414670|ref|ZP_06246412.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838085|gb|ACS29882.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 313 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 71/332 (21%), Positives = 114/332 (34%), Gaps = 64/332 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V++ +T L P H +A G + +V RAKYL Sbjct: 1 MPEGDSLVRVAHRLRPVLEGRVLTHADLR-------VPRHATADLTGWTVAEVLPRAKYL 53 Query: 61 LIELE--------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L L++I HL M G +++ V L + Sbjct: 54 LMRLTPPTARPGARPLTLISHLKMEGRWLVSAVDA---RWGAPAWQVRAVLETAGHRVLG 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN---------AIYLTHQFHKK 163 + G + LV T+ + L LGP+ D +++ A + + Sbjct: 111 A-------QLGLLTLVPTADEATV--LGHLGPDLLDPAWDTPDDGAALLAEGVRRLTARP 161 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + ALL+Q++V+GIGNIY CE L A + P R + G L + Sbjct: 162 ERPVGLALLDQRLVSGIGNIYRCETLLLAGIDPHRPVGEVEDVAGLVLLARDLLRANVPP 221 Query: 224 VLIDAIDAGGSSLRDY----------------------VHIDGSIGYFQNAFSVYGKTGE 261 A ++ G+ G ++ VYG Sbjct: 222 AAPAAGARRRTTGVRPNPGRPFGVEVLVPAGPPPGTTPGRTPGARGGGTPSYWVYGHDRA 281 Query: 262 PCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 PCL C +R+ R ++C +CQ Sbjct: 282 PCL-RCRGPVRQEDYGSAEDDARRLWWCPHCQ 312 >gi|134102322|ref|YP_001107983.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] gi|291003716|ref|ZP_06561689.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] gi|133914945|emb|CAM05058.1| endonuclease VIII [Saccharopolyspora erythraea NRRL 2338] Length = 262 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 96/283 (33%), Gaps = 46/283 (16%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHL 74 + + L L G+ + +V K+LLI +G+ ++ HL Sbjct: 2 HEALAGEVLVRGELRHPRL-------AEVDLAGRTVREVRPAGKHLLIRFDGDRTLHSHL 54 Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 M G++ + S + P H I T + + + + L+ T + Sbjct: 55 RMDGAWHVY--SPGARWRRPGHQARAILATEQRSAVGFNL--------HDLHLLRTGDER 104 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKIVAGIGNIYVCEALW 190 + + LGP+ ++ + + + ALL+Q +VAG+GN+Y E + Sbjct: 105 R--LIGHLGPDLLSPDWDESAALEAVRRLTAEPDREIGLALLDQSVVAGVGNLYKTEVCF 162 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 +P + L + G + R H Sbjct: 163 LLGSTPWTPVSEVDAAEAVRLSRELLL----RNAWHPEQSTTGDTRRGRTH--------- 209 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQK 289 +YG+ CL CG +RR VQ R ++C CQ+ Sbjct: 210 ---WIYGR--RTCL-RCGGAVRRGVQGHGIEERVAYHCPNCQR 246 >gi|255324812|ref|ZP_05365925.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] gi|255298112|gb|EET77416.1| putative DNA glycosylase [Corynebacterium tuberculostearicum SK141] Length = 272 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 106/300 (35%), Gaps = 46/300 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + + G V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMAGREVTGCSVR-------VPRYATVHLDGMVCERVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ + + HL M G++ I H + + K + + L N R I Sbjct: 53 FMQFDQ-AIVHTHLKMEGTWAI-HYAGDRWRKPGHTARIVLQLAN-----SPRDIEVVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 + GF+D+ + + + LGP+ D ++ + + + ALL+QK+VAG Sbjct: 106 QLGFVDIYP--ADHYHQRIAHLGPDILDPEWDREEALRRLNSRPQRAIGAALLDQKVVAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y EA + A + P + DI +++ + Sbjct: 164 IGNEYRAEACFLAGVHPATPVAEVDTAR--ILDISRRIMWANRT--------------SP 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 V + + V+G+ + C CG I + G R ++C +CQ Sbjct: 208 VRVTTGVRRAGETTYVFGRNRKRC-RRCGTFITKGALGGVDAGGDEGELERIIWWCPHCQ 266 >gi|226326881|ref|ZP_03802399.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] gi|225204718|gb|EEG87072.1| hypothetical protein PROPEN_00741 [Proteus penneri ATCC 35198] Length = 116 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL L+ I++VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKANSLTSEESEV------LVTAIKRVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ +PCL CGQ I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKPCL-ICGQPIESIKQGQRSTFFCRHCQ 110 >gi|184199953|ref|YP_001854160.1| putative DNA glycosylase [Kocuria rhizophila DC2201] gi|183580183|dbj|BAG28654.1| putative DNA glycosylase [Kocuria rhizophila DC2201] Length = 335 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 114/353 (32%), Gaps = 86/353 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L ++ + P ++ G+ ++ V R K++ Sbjct: 1 MPEGDSVYRQCKMLREALEGAVIESSDFR-------VPALATSDVSGRTVVAVVPRGKHI 53 Query: 61 LIELEG------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT-------- 100 LI L L++ HL M G++ + P Sbjct: 54 LIRLSAAPDAEQMKSGAEPLTLHSHLMMDGTWRVFDRQQDDAAARPGGRRSRPGASPYRP 113 Query: 101 -----------------------ISLTNNTNTKKYRVIYNDPRRFGFM----DLVETSLK 133 +++ ++T + + + GF LV T L+ Sbjct: 114 RGQARKGGSVRSAAEARTRLSADVAIGQGSHTIRAILRTKEVEAVGFDVKDVRLVPTRLE 173 Query: 134 YQYPPLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRA 192 Q + LGP+ ++ L + + + AL++Q+ +AGIGN+Y E L+ Sbjct: 174 DQE-LVGYLGPDILGPDWDLEKALERLSAQPDRAIGTALMDQRNLAGIGNVYRVETLFMT 232 Query: 193 KLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 + +P + SL + +L + + K R G + Sbjct: 233 RTNPWARVDSLPEGKLREIVVLAHKLLHLNKD------------RSMRSTVGQAPPGRPL 280 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAG-----------------RSTFYCTYCQ 288 F YGK G+PC CG ++R R+ +C CQ Sbjct: 281 FWAYGKDGQPC-RRCGTQLKRGEIDDALLTVDPAPSRTAVQHLRTIAWCPRCQ 332 >gi|227832624|ref|YP_002834331.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] gi|262182891|ref|ZP_06042312.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] gi|227453640|gb|ACP32393.1| putative endonuclease VIII [Corynebacterium aurimucosum ATCC 700975] Length = 273 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 108/305 (35%), Gaps = 52/305 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M+ VT L P + + G +V K+L Sbjct: 1 MPEGDSVLQLSNRL-QFMEGRRVTSSSLR-------VPRYATVRFDGLVCEEVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G L + HL M G++ I H + + K V + + N R I Sbjct: 53 FMDFGGELILHTHLKMEGTWAI-HYAGDRWRKPGHSARVVLQMENTP-----RDIELVGH 106 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK----KNSNLKNALLNQKI 176 G +++ + Q+ + LGP+ + H+ ++ ALL+Q+ Sbjct: 107 WLGLVEVFPSREFEQH--MAHLGPDILAPEWLEGGFEEAVHRIESRPERSIGAALLDQRN 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTR--SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 VAG+GN Y E + A + P + Q + +++ +V AG + Sbjct: 165 VAGLGNEYRAEVCFLAGVHPATPVALVDVPQILTISRRLIWANRDSPVRVTTGVKRAGET 224 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFY 283 + V+G+ + C CG +I + G R ++ Sbjct: 225 T------------------YVFGRNRQRC-RRCGTLIEKSTLGGVDAGGDEGELERVIWW 265 Query: 284 CTYCQ 288 C +CQ Sbjct: 266 CPHCQ 270 >gi|317184406|gb|ADV15626.1| putative formamidopyrimidine DNA glycosylase [Candida orthopsilosis] Length = 394 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 117/362 (32%), Gaps = 80/362 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH----------FSAATRGKKI 50 MPE+ EV + L + + + L L F + G +I Sbjct: 1 MPEVAEVAHVCALLKRNVLGFKIKKVNLSLDPLLFPVLKESTDPNAELEMMRSKLVGSRI 60 Query: 51 IDVSRRAKYLLIELEGNL-----SIIVHLGMSGSFIIEHTS------------------- 86 V R KY + L +++H GM+G I + Sbjct: 61 DSVGRHGKYFWLRLTKEGVPKSSVLLMHFGMTGMIKIRNVKSHLVFMENGGDKKILRELS 120 Query: 87 ----------CAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLV------ET 130 P+ + + L + K + + DPRR G + L+ Sbjct: 121 EPKKEGVMKVEPDTEWPPRFSKFEMDLVIDDF--KLELSFVDPRRLGRVRLITDRKAETD 178 Query: 131 SLKYQYPPLRTLGP-----------------EPA-----DNSFNAIYLTHQFHKKNSNLK 168 Q PPL LGP +P + K +K Sbjct: 179 EGLLQLPPLDALGPDYSKSEVETKVSDFVFGDPDPHHHGRPRLDLRGFNELILSKKKAIK 238 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 + LL+Q AG+GN E L+ AKL P + + +N+G ++ +L + + V + Sbjct: 239 SLLLDQAYFAGVGNWVGDEVLFHAKLHPNEIISSKIERNSGNINPVIERLYESLIYVCEE 298 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A+ G S + H + + S G+ G ++ I GR++ + Sbjct: 299 AVKCEGDSKKFPSHWLMLHRWGKARKS----QGKAKTKE-GFILDHITVGGRTSCFAPEV 353 Query: 288 QK 289 Q+ Sbjct: 354 QR 355 >gi|28572527|ref|NP_789307.1| endonuclease VIII [Tropheryma whipplei TW08/27] gi|28410659|emb|CAD67045.1| endonuclease VIII [Tropheryma whipplei TW08/27] Length = 294 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 112/313 (35%), Gaps = 48/313 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R+ + N I + RF +K+I K LL+ Sbjct: 1 MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRFSPGARL---LDKQKMISAKAYGKQLLLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------QHNHVTISLTNNTNT 109 E N + VHLG+ G++ P P + +T + + Sbjct: 58 FENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGA 117 Query: 110 KKYRVIYNDPRRFGFMDLVETS--------------LKYQYPPLRTLGPEPADNSFNAIY 155 +++ + + +T+ + + LGP+P N Sbjct: 118 SWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNR 177 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 K N + L+NQ +AGIGNIY E L+R +++P + ++ P+D L Sbjct: 178 FIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNTI------PEDTLK 231 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ + +L I G + ++ + G VY PC S C I + Sbjct: 232 RIWDDWTVLLKCGIKTGQM-----ITMNKAPG-----HWVYNHHKSPC-SVCFHPIDCVN 280 Query: 276 QAGRSTFYCTYCQ 288 AGR ++C CQ Sbjct: 281 VAGRKLYWCVVCQ 293 >gi|28493363|ref|NP_787524.1| DNA glycosylase [Tropheryma whipplei str. Twist] gi|28476404|gb|AAO44493.1| putative DNA glycosylase [Tropheryma whipplei str. Twist] Length = 294 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 112/313 (35%), Gaps = 48/313 (15%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R+ + N I + RF +++I K LL+ Sbjct: 1 MPEGHSIHRSAIQFEHNFVGKKIGISSPQGRFSPGARL---LDKQRMISAKAYGKQLLLG 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP--------------QHNHVTISLTNNTNT 109 E N + VHLG+ G++ P P + +T + + Sbjct: 58 FENNRFLQVHLGIYGAWQFYGNISCAPTILPGAEGIQSIGAPRRLKGPCITKNSGSTPGA 117 Query: 110 KKYRVIYNDPRRFGFMDLVETS--------------LKYQYPPLRTLGPEPADNSFNAIY 155 +++ + + +T+ + + LGP+P N Sbjct: 118 SWKDLMFKHQAQARAKLITDTAGVLLSGPAVCKVLTPEEADELISRLGPDPVVNPMGYNR 177 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 K N + L+NQ +AGIGNIY E L+R +++P + ++ P+D L Sbjct: 178 FIKAARKSNLQICKLLMNQSAIAGIGNIYRAEILFRNRVNPFLTSNTI------PEDTLK 231 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 ++ + +L I G + ++ + G VY PC S C I + Sbjct: 232 RIWDDWTVLLKCGIKTGQM-----ITMNKAPG-----HWVYNHHKSPC-SVCFHPIDCVN 280 Query: 276 QAGRSTFYCTYCQ 288 AGR ++C CQ Sbjct: 281 VAGRKLYWCVVCQ 293 >gi|227548294|ref|ZP_03978343.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] gi|227079612|gb|EEI17575.1| formamidopyrimidine-DNA glycosylase [Corynebacterium lipophiloflavum DSM 44291] Length = 269 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 104/294 (35%), Gaps = 40/294 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + + L M VT L P + G V K+L Sbjct: 1 MPEGDSVYQLSKRL-QFMAGREVTHTSLR-------VPRFATVDFTGLTCDRVWPLGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G ++ HL M G++ I H + + K V + L + + Sbjct: 53 FMQF-GPETLHTHLKMEGTWSI-HRAGTRWRKPGHTARVVLRLADKQGEIEIV-----GH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAG 179 G +D+ T + LGP+ F+ + + ++ + ALL+QK AG Sbjct: 106 ELGLVDVFPTREY--PTRMSYLGPDMLAEDFDHDEVVRRILRTPDTEIGRALLDQKNAAG 163 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E + A P R+ R + + + KL+ + Sbjct: 164 IGNEYRAEICFLAGTHPARQVREVDVDKHV--QLARKLMWANKD--------------SP 207 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 V + + V+G+ +PC C +IR+ G R ++C CQ Sbjct: 208 VRVTTGVKRAGETSYVFGRNNKPC-RRCTTLIRKGFLGGEGDLERVIWWCPRCQ 260 >gi|150865500|ref|XP_001384741.2| hypothetical protein PICST_84240 [Scheffersomyces stipitis CBS 6054] gi|149386756|gb|ABN66712.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 361 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 118/361 (32%), Gaps = 77/361 (21%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF------PHHFSAATRGK----KI 50 MPE+ EV + L + + + L+ L F P + +G+ I Sbjct: 1 MPEVAEVAHVCAQLRRNVLGYQIASLVLNNDALLFPVLKNASNPEKELQSLQGRLLHSTI 60 Query: 51 IDVSRRAKYLLIEL-----EGNLSIIVHLGMSGSFIIEH--------------------- 84 V R KY + + +++H GM+G+ I + Sbjct: 61 ESVGRHGKYFWLRTRPVDSKSTDVLLMHFGMTGNIKIRNIGSHLIFLENAGTKEDVVTVE 120 Query: 85 ---TSCAKPIKNPQHNHVTI---SLTNNTNTKKYRVIYNDPRRFGFMDLVE------TSL 132 + K P+ L + + + + DPRR G + L+ Sbjct: 121 QLQNEENESKKEPEEWPPRFTKMELVLEKDGTRLDLAFTDPRRLGRIRLLTGPGIQADED 180 Query: 133 KYQYPPLRTLGPE------------------PA-----DNSFNAIYLTHQFHKKNSNLKN 169 PL LGP+ P + K +K+ Sbjct: 181 LLNTSPLDALGPDYSKSPNSLKSEKEFVIGDPDPHHHGRPRPTVEEFSKLVLSKKKPIKS 240 Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 LL+Q +GIGN E +++A++ P + + QN ++ +L I + ++ Sbjct: 241 FLLDQAFFSGIGNWVGDEVVYQARIHPNEVISSKIPQNLEKVHPVVQRLYDSIIYICEES 300 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ + + +S K G ++ G+ + + GR++ + Q Sbjct: 301 VRVEGNVKKFPSNWL-----MLYRWSKAKKKGPKPTTDDGKALDFVTVGGRTSCFVPELQ 355 Query: 289 K 289 K Sbjct: 356 K 356 >gi|124003723|ref|ZP_01688571.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] gi|123990778|gb|EAY30245.1| formamidopyrimidine-DNA glycosylase (Fapy-DNAglycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM), putative [Microscilla marina ATCC 23134] Length = 294 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 109/286 (38%), Gaps = 38/286 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++++ R NL T+ +H A G+ + V R K L Sbjct: 1 MPELPDLQVFRSNLQKRFVGKTLQMFTVHNPKKLNTSEEKCKQALEGQWLKSVKRHGKEL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 E I VHL + G F+ P P + + + + D Sbjct: 61 FFEFNNKEVIGVHLMLKGQFV------ELPHYQPTNLILALHFDGGKG-----LAITDSM 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAG 179 + L S + P+ D FN YL + HK +K+ L++QKIV G Sbjct: 110 SLTRITLNPPSPQ---------APDALDLEFNIKYLLNTLHKNTKVPVKSFLMDQKIVRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN YV E LW AK+SP + P+ + +L + I++VL + G + Sbjct: 161 IGNAYVDEILWEAKISPF------SHCDQIPESAVRELHRHIKQVLKN-----GETQIKI 209 Query: 240 VHIDGSIGYFQNAFSVYG--KTGEPCLSNCGQMIRRIVQAGRSTFY 283 H D G ++ ++ KT P G I R T+Y Sbjct: 210 SHPDIIAGEIRDFMKIHHPDKTHSP----TGADILIQKLNKRKTYY 251 >gi|222053400|ref|YP_002535762.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] gi|221562689|gb|ACM18661.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Geobacter sp. FRC-32] Length = 259 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 105/286 (36%), Gaps = 38/286 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++ + NL + + + R P + + + + I V R K + Sbjct: 1 MPELPDLTVFAENLGKRVTKKMIRSVTCGRNLRLNVSPRELAESLQDQVIEGVERWGKEI 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L + VHL ++G F+I KP K P + I ++T+ ++ D + Sbjct: 61 RFLLGNGKILHVHLMLTGGFVI----TGKPDKVP-FPQLVIGFEDDTS-----LVVTDEK 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 L + P+ + L + + K L++QK++ G Sbjct: 111 AMAMAALDPEKAEAS--------PDAL--AVTVDELKRLISRFPKAKAKAFLIDQKVMRG 160 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 IGN Y E LW A++SP+ L + + V I + G ++ Sbjct: 161 IGNAYADEILWEARISPLSLMGKLTPQTIEVLAEKIPAVLQWAIVSIKERNPGITA---- 216 Query: 240 VHIDGSIGYFQNAFSVYG--KTGEPCLSNCGQMIRRIVQAGRSTFY 283 G ++ V+ + P G+ I + A ++T+Y Sbjct: 217 -------GEIRDFLQVHNPSRKTSP----TGRPIIKEKIAQKTTYY 251 >gi|126667129|ref|ZP_01738104.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] gi|126628535|gb|EAZ99157.1| endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase [Marinobacter sp. ELB17] Length = 269 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 94/258 (36%), Gaps = 27/258 (10%) Query: 41 FSAATRGKKIIDVSRRAKYLLIEL-----EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 F G+ + V R K +L+ +G + H + G + I P+ Sbjct: 27 FEPTLAGRLVTAVEARGKAVLVFFSALADDGPWCVYSHNQLYGQWRISKADA-----QPK 81 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 +N + +D R LV Q L LGP+P + + + Sbjct: 82 TGRQLRFAVIGSNKAAWLYSASDIR------LVRPDDLEQVVYLARLGPDPVNQTISVEN 135 Query: 156 LTHQF---HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 + QF + L LL+Q VAG+GN E L+ A L P K + + ++ Sbjct: 136 VLAQFDDKRFRGRGLGGLLLDQGFVAGVGNYLRSEILFEAGLMPSVKPKDMSSE---ARE 192 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF--QNAFSVYGKTGEPCLSNCGQM 270 L K I + + G ++ + V G Q F V+ + EPC C Sbjct: 193 RLAKAILVLIERTYRL--KGITNDPERVKRLKREGRTFSQRRFMVFNRDSEPCYE-CETP 249 Query: 271 IRRIVQAGRSTFYCTYCQ 288 I +I A R +YC CQ Sbjct: 250 IVKISVASRRLYYCPLCQ 267 >gi|289706075|ref|ZP_06502448.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] gi|289557277|gb|EFD50595.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Micrococcus luteus SK58] Length = 312 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 70/333 (21%), Positives = 115/333 (34%), Gaps = 65/333 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L V++ +T L P H +A G + +V RAKYL Sbjct: 1 MPEGDSLVRVAHRLRPVLEGRVLTHADLR-------VPRHATADLTGWTVAEVLPRAKYL 53 Query: 61 LIELE--------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKY 112 L+ L L++I HL M G +++ V L + Sbjct: 54 LMRLAPPAARPGARPLTLISHLKMEGRWLVSAVDA---RWGAPAWQVRAVLETAEHRVLG 110 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN---------AIYLTHQFHKK 163 + G + LV T+ + L LGP+ D +++ + + Sbjct: 111 A-------QLGLLTLVPTADEATV--LGHLGPDLLDPAWDTPDDGAALLVEGVRRLTARP 161 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 + ALL+Q++V+GIGNIY CE L A + P R + G + L++ Sbjct: 162 ERPVGLALLDQRLVSGIGNIYRCETLLLAGIDPHRPIGDVEDVAGLVL-LARDLLRANVP 220 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIG----------------------YFQNAFSVYGKTGE 261 A A + + G ++ VYG Sbjct: 221 PAAPATGARRRTTGVRPNPGRPFGVEVLVPAGPPPGTAPGRTPGARGGTPSYWVYGHDRA 280 Query: 262 PCLSNCGQMIRRIVQAG-----RSTFYCTYCQK 289 PCL C +R+ R ++C +CQ+ Sbjct: 281 PCL-RCRGPVRQEDYGSPEDDARRLWWCPHCQR 312 >gi|68697730|emb|CAJ14058.1| hypothetical protein [Streptomyces viridochromogenes] Length = 190 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 14/203 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHH-FSAATRGKKIIDVSRRAKY 59 MPELP+VE R+ L + TV + + + D A G++ R K+ Sbjct: 1 MPELPDVEGFRQVLESCARGRTVRRVDVRDAGVLHDVSARGLRNALEGRRFGAPERHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LL G ++++H GM+G + H A H+ V +L+ + + D Sbjct: 61 LLART-GGPTLVLHFGMTGRLVCCHPGDA----VEAHDRVLFTLSGGRQLR-----FRDQ 110 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179 R+ + L LR GP+ + + + +LK AL +Q ++AG Sbjct: 111 RKLQGLWLAHDDFDID-RLLRRQGPDAL--TVDRAEFEAVLCARRGSLKTALTDQSVLAG 167 Query: 180 IGNIYVCEALWRAKLSPIRKTRS 202 +GN+ E LWRA+L P R+TR Sbjct: 168 LGNLLADEILWRARLRPDRRTRE 190 >gi|326330788|ref|ZP_08197089.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] gi|325951318|gb|EGD43357.1| DNA-formamidopyrimidine glycosylase [Nocardioidaceae bacterium Broad-1] Length = 161 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 5/153 (3%) Query: 139 LRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 + LGP+P + + + + + + L++Q ++AG+GN+Y E L+R ++ P+R Sbjct: 2 VAKLGPDPLRDDADPGRAWLRISRSRTTIGALLMDQSVLAGVGNVYRAEVLFRHRIDPMR 61 Query: 199 KTRSLIQNN--GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 +L + D++ + ++K ID + + + + VY Sbjct: 62 PGNTLRRQQWDAIWDDLVELMKDGVEKNRIDTVRDEHTP--EAMGRPPRKDDHGGEVYVY 119 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+PCL CG +R R+ F+C CQ+ Sbjct: 120 RRNGQPCL-VCGTSVRTTELQQRNLFWCPKCQR 151 >gi|308177637|ref|YP_003917043.1| DNA glycosylase [Arthrobacter arilaitensis Re117] gi|307745100|emb|CBT76072.1| DNA glycosylase [Arthrobacter arilaitensis Re117] Length = 322 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 113/331 (34%), Gaps = 59/331 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R V + + RF G + + K L Sbjct: 1 MPEGHSLHRLARQFDDVFGGQV---VAVTSPQGRFASDAE---RIDGHHLEHAFAKGKQL 54 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHT---------------SCAKPIKNPQHNHVTISLTN 105 +L + VHLG+ G+F + +P+ T Sbjct: 55 FCRFSNDLYLRVHLGLYGAFSFGGDHYFTGASSIGAPRKIGERESGPSPESEQYT-GPPE 113 Query: 106 NTNTKKYRVI----YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA-------------- 147 + R++ + D R ++++ L LGP+P Sbjct: 114 PVGAVRARIVSEHGWADLRGPTACEVLDHDQVQIQ--LGKLGPDPLIGSALRIRAAKGQV 171 Query: 148 DNSFNAIYL-------THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 D S A L K + + L+NQ +++G+GNIY EAL+R ++SP Sbjct: 172 DPSLAATELEAGFNEFRANLLKTKTAIGIVLMNQALISGVGNIYRAEALFRNRISPQLPA 231 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG--SSLRDYVHIDGSIGYFQNAFSVYGK 258 L KL +I V+ D + G ++L + G + + NA+ VY + Sbjct: 232 NGLSTQKA------KKLWWDIVSVMEDGVRDGKIITTLPEDRDPLGVV-WPDNAYYVYQR 284 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G C C I A R ++C CQK Sbjct: 285 QGMGC-RKCSAQISLAEVAARKLYWCPRCQK 314 >gi|227487758|ref|ZP_03918074.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092260|gb|EEI27572.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51867] Length = 287 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 102/298 (34%), Gaps = 40/298 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE V + L M+ + LR P + G +V K+L Sbjct: 16 PEGDSVYQLATRL-QFMRGR-----EVLYSQLR--VPAYALERFDGSLCDNVWPYGKHLF 67 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 ++ G + HL M G++ + H + + K V + L + + V+ Sbjct: 68 MQF-GEKILHTHLKMEGTWSV-HPAGKRWTKPGFTARVVLRLEGAPHPRPIEVVGFS--- 122 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G + + T + LGP+ N + + + ALL+QK +AG+G Sbjct: 123 LGLVRVFPTVEYDHR--VGYLGPDVLGNWDEDEAARRILARPDRPIGTALLDQKNLAGVG 180 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N Y E + A + P +L + L + + + + + Sbjct: 181 NEYRAEICFIAGVHPATPVAALGPDKVHDILALTRHLMWENR-------------KSPIR 227 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 + + V+G+ +PC CG +I + G R ++C +CQ Sbjct: 228 VSTGVRKVGETSYVFGRNNKPC-RRCGTLIEKGFLGGVDRGGDADELERVIWWCPHCQ 284 >gi|227542402|ref|ZP_03972451.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181600|gb|EEI62572.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium glucuronolyticum ATCC 51866] Length = 287 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 107/298 (35%), Gaps = 40/298 (13%) Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLL 61 PE V + L M+ + LR P + G +V K+L Sbjct: 16 PEGDSVYQLATRL-QFMRGR-----EVLYSQLR--VPAYALERFDGSLCDNVWPYGKHLF 67 Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 ++ G + HL M G++ + H + + K V + L + + V+ Sbjct: 68 MQF-GEKILHTHLKMEGTWSV-HPAGKRWTKPGFTARVVLRLEGAPHPRPIEVVGFS--- 122 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G + + T + LGP+ N + + + ALL+QK +AG+G Sbjct: 123 LGLVRVFPTVEYAHR--VGYLGPDVLGNWDEDEAARRILARPDRPIGTALLDQKNLAGVG 180 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 N Y E + A + P +L D ++ ++ ++++ + + + Sbjct: 181 NEYRAEICFIAGVHPATPVAALGP------DKVHDILAVTRRLMWENRN-------SPIR 227 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCTYCQ 288 + + V+G+ +PC CG +I + G R ++C +CQ Sbjct: 228 VSTGVRKVGETSYVFGRNNKPC-RRCGTLIEKGFLGGVDRGGDADELERVIWWCPHCQ 284 >gi|255077513|ref|XP_002502394.1| DNA glycosylase [Micromonas sp. RCC299] gi|226517659|gb|ACO63652.1| DNA glycosylase [Micromonas sp. RCC299] Length = 447 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 33/287 (11%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL-- 64 V + + + T N RF H + GK++ V K L Sbjct: 7 VHRVAASARRHLVGKRFTA---TSPNGRF---AHGAEVIDGKELKRVDAIGKNLFYFFNE 60 Query: 65 -EGNL--SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +G + VH GMSG F HT + + + + ++ Sbjct: 61 ADGPDAHVMHVHFGMSGRFSTHHTLPGP--EPGATTRLRLESREHGIC---ALLSAMTVE 115 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 G + L +T LG +P +A L +F + ++ AL++Q + AG+G Sbjct: 116 LGDISLFQTKR-------AKLGEDPLREDADADRLWEKFTRSRKSVGLALMDQAMFAGVG 168 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L++A + P + L P+ ++ + ++L G D Sbjct: 169 NIYRAEILYKAGVHPEQPCADL------PRPAFDEVWRHSVELLQRGFVTGSILTVDP-D 221 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++G VY + C CG ++ A R+ + C CQ Sbjct: 222 EAKTLGEPWTRRYVYNQ--RSCG-RCGSAVKTWDMAARTVYCCEVCQ 265 >gi|149923089|ref|ZP_01911505.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] gi|149816065|gb|EDM75577.1| DNA-formamidopyrimidine glycosylase [Plesiocystis pacifica SIR-1] Length = 292 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 113/312 (36%), Gaps = 46/312 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR-FDFPHHFSAATRGKKIIDVSRRAKY 59 MPE + L V+ +T L+ R H + G+++ V R K Sbjct: 1 MPEGDSLHATAITLRAVLAGRELTGCELNWSGRRGVALAHGEAWRVPGRRVESVEARGKN 60 Query: 60 LLIELEGN----------------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISL 103 LLI + L+I H+GM+GS+ + + P+ + + Sbjct: 61 LLIRCAPHPEAVGAVEAGGRAALALTIWSHMGMTGSWH-TYRPRERWALPPRDAPIVLRT 119 Query: 104 TNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK- 162 R ++L+ ++ L LGP+ + + Sbjct: 120 AERVVPCF---------RPHALELLGPRGVLRHRVLARLGPDLLAAKPDLDEALARMRAL 170 Query: 163 ----KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 L +A++ Q++VAGIGN Y E L+ L P +L + + + Sbjct: 171 VEAEPGVELGDAVMRQRVVAGIGNEYKSELLFLEGLDPFAPLAAL-------DEAARRSL 223 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA- 277 E L+ A A G+ R +D G VY ++G PC CG+++ Q Sbjct: 224 LERAAALMRANLASGAPRRTRFALDDPHGRG----WVYERSGRPC-RVCGELVCMRRQGA 278 Query: 278 -GRSTFYCTYCQ 288 RST++C CQ Sbjct: 279 LARSTYFCPNCQ 290 >gi|227875970|ref|ZP_03994093.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] gi|227843502|gb|EEJ53688.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35243] Length = 389 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 87/237 (36%), Gaps = 41/237 (17%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 + M G F + V + L N + P R Sbjct: 184 HFADRWFL-----MPGQFRVFAPVGT----------VRLRLMNPHGVADL----SGPNRC 224 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D +T LGP+P + +++ + AL++Q + AG+GN Sbjct: 225 ELLDWAQTRAIA-----ARLGPDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGN 279 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL---RDY 239 IY EAL+ A+LSP R + + L ++ + + + +++G + RD Sbjct: 280 IYRAEALFAARLSPFVPAREVSER------KLRRVWDWLVEYMARGVESGRVTTLAPRDA 333 Query: 240 VH-------IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G I + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 334 ADFATCQAGAGGKIQAVDQRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 Score = 44.5 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 33/121 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + +++ ++ RF + G++++ V K+L Sbjct: 1 MPEGHSIHRLAGQFRVLLGGQVLSA---SSPQGRF---AAGATRLDGQRLVAVRVHGKHL 54 Query: 61 LIEL------------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 + + + VHLG+ GS+ + P H Sbjct: 55 FLGFAPADLKVASVVAVTEGGSRGAISEDALTWLHVHLGIYGSWRFTGDAV---FHEPLH 111 Query: 97 N 97 Sbjct: 112 W 112 >gi|225023097|ref|ZP_03712289.1| hypothetical protein CORMATOL_03145 [Corynebacterium matruchotii ATCC 33806] gi|224944320|gb|EEG25529.1| hypothetical protein CORMATOL_03145 [Corynebacterium matruchotii ATCC 33806] Length = 273 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 103/302 (34%), Gaps = 47/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + TV + P H + G I V K+L Sbjct: 1 MPEGDSIYQLSRRL-QFLVGRTVLAADIR-------VPRHATVNLAGTTIRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ + I HL M G++ I + P H I + + ++ + Sbjct: 53 FMQLD-DAIIHTHLKMEGTWAIHRVG--DRWRRPVHTARLILRVADPPHQPIELVGHS-- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKI 176 GF+ + ++ + LGP+ + + + + ALL+Q Sbjct: 108 -LGFVKIFSAKTYPEH--IGHLGPDVLAPDWEHMGEPEAWRRIMLRPDRPVGTALLDQTN 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E + A + P + + I +LI + Sbjct: 165 LAGIGNEYRAEICFIAGIHPQTPVKLCDMHQVLA--IARRLIWGNRL------------- 209 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----------GRSTFYCTY 286 + + + + V+G+ G+PC CG +I R ++C Sbjct: 210 -SPLRVTTGVRRVGESTYVFGRDGQPC-RRCGTVIVTGTLGGAAGGDEGELERMIWWCPR 267 Query: 287 CQ 288 CQ Sbjct: 268 CQ 269 >gi|296394819|ref|YP_003659703.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Segniliparus rotundus DSM 44985] gi|296181966|gb|ADG98872.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Segniliparus rotundus DSM 44985] Length = 248 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 97/271 (35%), Gaps = 37/271 (13%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 T+ + P + + G + +V R K+L I + G S+ HL M G Sbjct: 14 GKTLVRCDIR-------VPKYATVDLAGHVVDEVLSRGKHLFIRI-GPASVHSHLKMEGE 65 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + P+++ V L T G +++++ + + Sbjct: 66 WRVVAQKPRTPVRDY---RVRAVLAAADVTALGL-------DLGVLEVLDRARDMA--AV 113 Query: 140 RTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+ ++ + + + L LL+Q+++AG+GN+Y E + P Sbjct: 114 SHLGPDLLGPDWDPETAAERLTAQPDRPLAETLLDQRVMAGVGNVYCNELCFLVGRLPTS 173 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 G P ++ + ++ A R D G VYG+ Sbjct: 174 PVG----AAGDPARLVARAHALLRANRDRA--------RRTTTGDSRPGR---ELWVYGR 218 Query: 259 TGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G PC CG IR R ++C +CQ+ Sbjct: 219 RGLPC-RRCGTPIRYDPDGPRVRYWCPFCQR 248 >gi|306819251|ref|ZP_07452962.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] gi|304648033|gb|EFM45347.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mobiluncus mulieris ATCC 35239] Length = 389 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 87/237 (36%), Gaps = 41/237 (17%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 + M G F + V + L N + P R Sbjct: 184 HFADRWFL-----MPGQFRVFAPVGT----------VRLRLMNPHGVADL----SGPNRC 224 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D +T LGP+P + +++ + AL++Q + AG+GN Sbjct: 225 ELLDWAQTRAIA-----ARLGPDPLRPDAQFADFVARAGRRSKGIGEALMDQNVAAGVGN 279 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL---RDY 239 IY EAL+ A+LSP R + + L ++ + + + +++G + RD Sbjct: 280 IYRAEALFAARLSPFVPAREVSER------KLRRVWDWLVEYMARGVESGRVTTLAPRDA 333 Query: 240 VH-------IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G I + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 334 ADFATCQAGAGGKIQAVDQRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 33/121 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + ++ ++ RF + G++++ V K+L Sbjct: 1 MPEGHSIHRLAGQFRALLGGQVLSA---SSPQGRF---AAGATRLDGQRLVAVRVHGKHL 54 Query: 61 LIEL------------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 + + + VHLG+ GS+ + P H Sbjct: 55 FLGFAPADLKVASVVAVTEGGSRGAISEDALTWLHVHLGIYGSWRFTGDAV---FHEPLH 111 Query: 97 N 97 Sbjct: 112 W 112 >gi|172041197|ref|YP_001800911.1| putative endonuclease VIII [Corynebacterium urealyticum DSM 7109] gi|171852501|emb|CAQ05477.1| putative endonuclease VIII [Corynebacterium urealyticum DSM 7109] Length = 290 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 108/315 (34%), Gaps = 55/315 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M V P +A+ G++I V K+L Sbjct: 1 MPEGDSVLQLANRL-KWMPGREVLHSDFR-------VPALATASITGERIQAVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I+ G + HL M G + I H + ++ + V + L+ + + Sbjct: 53 FIQ-AGEQILHTHLKMEGVWAI-HAAGSRWRRPGYTARVVLHLSPQHPSGPPIEVV--GH 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF------------NAIYLTHQFHKKNSNLK 168 GF+ L ++ LGP+ D + L + + +L Sbjct: 109 ELGFVRLYPARDYPAV--VQHLGPDILDPCWASEEFRDTGRTGRDEALRRILRRPDRSLG 166 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+ VAGIGN Y E ++ L P + + L + + ++ Sbjct: 167 AALLDQRNVAGIGNEYRAEVMFLTGLHPAVPVGRVGEEKVAQALDLARRVMWENRLEPHR 226 Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---------- 278 + G +G F V+G+ +PC CG+ I + G Sbjct: 227 VFTG--------DRRPGMGTF-----VFGRAAKPC-RRCGETIEQSTLGGRFAGGDPVLD 272 Query: 279 -----RSTFYCTYCQ 288 R ++C +CQ Sbjct: 273 AGELERIIWWCPHCQ 287 >gi|227354782|ref|ZP_03839199.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] gi|227165100|gb|EEI49931.1| possible formamidopyrimidine-DNA glycosylase [Proteus mirabilis ATCC 29906] Length = 116 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 7/117 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ K+V G+GNIY EAL+ + + P RK SL + L+ I+ VL +I+ Sbjct: 1 MDNKLVVGVGNIYANEALFSSGIMPDRKASSLTEQECDV------LVNAIKAVLTRSIEQ 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 GG++L+D++ DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 55 GGTTLKDFLQSDGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 110 >gi|309811321|ref|ZP_07705108.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] gi|308434628|gb|EFP58473.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Dermacoccus sp. Ellin185] Length = 304 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 35/300 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L L + G++ + V K++ Sbjct: 1 MPEGDTVMWAAARLNRALLGQRLTRTDLRTPRL-------ATVDLSGRECLPVVTHGKHM 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI----Y 116 L LEG ++I H M G + + + + +T + + Sbjct: 54 LHRLEGGVTIHSHFKMEGRWSLLPAPSTLQGRAAAGAEADVRRAVTAHTTRALLYTPRTL 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALL 172 + G +D++ET+ + + LGP+ + ++ L + + + ALL Sbjct: 114 AVGSKLGVLDVLETARECDV--VGHLGPDLLADDWDGGGRGRALDNLRAQPERPVGEALL 171 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q++VAG+G ++ E LW ++ P Q P +L ++ + +++++ + G Sbjct: 172 DQRLVAGLGTFWISEMLWVHRILPW------TQLAAMPDGVLEAVLDDARRLMLVSGRTG 225 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 S G Q+ V+ ++G CL C IR + R+ F C CQ Sbjct: 226 VQS------STGDARAGQDR-YVHARSGMACL-RCNDTIRVAMAGDPGRERTLFSCPTCQ 277 >gi|326330079|ref|ZP_08196392.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] gi|325952124|gb|EGD44151.1| endonuclease VIII [Nocardioidaceae bacterium Broad-1] Length = 250 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 95/296 (32%), Gaps = 55/296 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R+L + +T P +A G ++ + R K+L Sbjct: 1 MPEGDAVLRTARSLDKGLARQVLTRTDFR-------VPQLATADLSGGTVLGTATRGKHL 53 Query: 61 LIELE---GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 L ++ G ++ HL M GS+ I + P + T T + + Sbjct: 54 LTRIDHRTGEWTLHTHLKMEGSWRIL--EAGRRWPKPGFQARVVLRTERTEAVGFLL--- 108 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNALLNQKI 176 G ++LV + Q + LGP+ + ++ + + L AL +Q Sbjct: 109 -----GIVELVPRDQEEQ--LVAHLGPDILADDWDPDTALQRLRDQPERPLFEALRDQTN 161 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIG IY E + A ++P+R L+Q Sbjct: 162 LAGIGTIYAAETCFIAGINPLRTVEEAGDRLPRILQRTRDLMQADWSRS----------- 210 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 VYG+ C CG + R +YC CQ Sbjct: 211 --------------RQMWVYGR--RAC-RRCGGTVTVAKVGPPGKERPAYYCARCQ 249 >gi|120437537|ref|YP_863223.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] gi|117579687|emb|CAL68156.1| formamidopyrimidine-DNA glycosylase [Gramella forsetii KT0803] Length = 293 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 31/288 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEV + + + + + + + F A + + ++ KYL Sbjct: 34 MPELPEVAYQKIYVDSTSLHHKIVKVDMGADKIFQSPKSEFEATLLKNEFVSSTQIGKYL 93 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L++L+ ++VH GM+G + +H +T++ + ++ + PR Sbjct: 94 LLKLKEKGYLVVHFGMTGKMDYFQHDEIQ-----KHAQLTLTFEDGG-----KLSFVCPR 143 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 +FG + L + +++ + LGP + S + F K ++K AL++Q +AG+ Sbjct: 144 KFGKLFLTTSPDEFRKK--QKLGPHATEIS--EEDFHNLFDGKRGSVKTALMDQSFIAGL 199 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN+YV E L+++ + P K+ +L + + ++K + I + + + G Y+ Sbjct: 200 GNLYVDEILFQSGIHPKSKSENLSDKDLSN---MFKNMVAILETVTKSKTEGNPIPDTYL 256 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + GE C I+ I GRST++C+ CQ Sbjct: 257 RN-------------HRNEGEAC-PIAKGKIKMIKVGGRSTYFCSECQ 290 >gi|227504232|ref|ZP_03934281.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] gi|227199187|gb|EEI79235.1| DNA-(apurinic or apyrimidinic site) lyase [Corynebacterium striatum ATCC 6940] Length = 281 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 66/312 (21%), Positives = 108/312 (34%), Gaps = 61/312 (19%) Query: 1 MPELPEVEIIRRNLMMVM---KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPE V L M VT + P + A G + + V Sbjct: 1 MPEGDSV----LQLAERMQFMVGREVTKTSVR-------VPRYALARFDGMECVAVWPYG 49 Query: 58 KYLLIELEGN----LSIIVHLGMSGSFIIEHTSCAKPIKNPQHN-HVTISLTNNTNTKKY 112 K+L +E G+ L + HL M G + I + + P H V + L N + Sbjct: 50 KHLFMEFAGDEDEPLILHTHLKMEGQWHIHY--AGDRWRAPGHTARVVLQLAN-----EP 102 Query: 113 RVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-----AIYLTHQFHKKNSNL 167 R I GF+++ S + LGP+ D + + + + Sbjct: 103 RDIEIVGHTLGFVEVYPESDYLGR--IEHLGPDILDPDWEINGGREEAIWRIEARPERAI 160 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 ALL+QK VAGIGN Y EA + A + P + + + K++ + ++ Sbjct: 161 GAALLDQKNVAGIGNEYRAEACFIAGMHPAERVGDVD---------VEKIVDVSRTIMWA 211 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--------- 278 + + + V+G+T C CG I + V G Sbjct: 212 NRF-------SLIRVTTGVRRAGETTYVFGRTNARC-RRCGTPIEKGVLGGVDAGGDEGE 263 Query: 279 --RSTFYCTYCQ 288 R ++C +CQ Sbjct: 264 LERIIWWCPHCQ 275 >gi|149277931|ref|ZP_01884070.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] gi|149231129|gb|EDM36509.1| formamidopyrimidine-DNA glycosylase [Pedobacter sp. BAL39] Length = 259 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 25/243 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELP++E+ NL KN T+ + + A G ++ V R K L Sbjct: 1 MPELPDLEVFAANLEKRFKNKTLEKLDVQVSKKLNVPEKELKDALEGHELKQVLREGKTL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + G + +HL + G + I ++ K + Sbjct: 61 QLHFGGGNVLGLHLMLHGELSL------------------IEKDDDVKFKIIEFQFRGDN 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 RF D + + P + + P+ F+ Y +K +K L++QK+V GI Sbjct: 103 RFALTDFQKQATPTLNPEVSEV-PDALSEEFSFAYFQDLLSRKKIKIKQLLMDQKLVRGI 161 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GN Y E LW AK+SP + P + +L I KVL D I A ++ D Sbjct: 162 GNTYADEILWHAKISPF------SVSKAIPTKEVKELYHSIGKVLRDEIIALTKAISDSF 215 Query: 241 HID 243 + + Sbjct: 216 NAE 218 >gi|254791860|ref|YP_003076697.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|254591260|gb|ACT70621.1| endonuclease VIII, 5-formyluracil [Escherichia coli O157:H7 str. TW14359] gi|326345767|gb|EGD69506.1| Endonuclease VIII [Escherichia coli O157:H7 str. 1125] Length = 273 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 19/211 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +L++ H + G + + T + K ++Y+ Sbjct: 56 LTHFSNDLTLYSHNQLYGVWRVVDTGEESQT-------TRVLRVKLQTADKTILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIV 177 ++++ +P L+ +GP+ D + + + +N LL+Q + Sbjct: 109 ----IEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFL 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNG 208 AG+GN E LW+ L+ K ++ ++ N Sbjct: 165 AGLGNYLRVEILWQVGLTGNHKAKTSMRRNW 195 >gi|305681748|ref|ZP_07404552.1| formamidopyrimidine-DNA glycosylase N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658221|gb|EFM47724.1| formamidopyrimidine-DNA glycosylase N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 273 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 103/302 (34%), Gaps = 47/302 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + R L + TV + P H + G I V K+L Sbjct: 1 MPEGDSIYQLSRRL-QFLVGRTVLAADIR-------VPRHATVNLAGTTIRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++L+ + I HL M G++ I + P H I + + ++ + Sbjct: 53 FMQLD-DAIIHTHLKMEGTWAIHRVG--DRWRKPAHTARLILRVADPPHQPIELVGHS-- 107 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKI 176 GF+ + ++ + LGP+ + + + + ALL+Q Sbjct: 108 -LGFVKIFSAKTYLEH--VGHLGPDVLALDWEHMGEPEAWRRIMLRPDRPVGTALLDQTN 164 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AGIGN Y E + A + P + + I +LI + Sbjct: 165 LAGIGNEYRAEICFIAGIHPQTPVKLCDMHQVLA--IARRLIWGNRL------------- 209 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----------GRSTFYCTY 286 + + + + V+G+ G+PC CG +I R ++C Sbjct: 210 -SPLRVTTGVRRVGESTYVFGRDGQPC-RRCGTVIATGTLGGAAGGDEGELERMIWWCPR 267 Query: 287 CQ 288 CQ Sbjct: 268 CQ 269 >gi|307700125|ref|ZP_07637171.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] gi|307614674|gb|EFN93897.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Mobiluncus mulieris FB024-16] Length = 389 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 41/237 (17%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 + M G F + V + L N + P R Sbjct: 184 HFADRWFL-----MPGQFRVFAPVGT----------VRLRLMNPHGVADL----SGPNRC 224 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D +T LGP+P + + + + +L++Q ++AG+GN Sbjct: 225 ELLDWAQTQAIA-----ARLGPDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGN 279 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY EAL+ A+LSP R + + L ++ + + + +++G + Sbjct: 280 IYRAEALFAARLSPFVPAREVSER------KLRRVWDWLVEYMARGVESGRITTIGREDA 333 Query: 243 DGSIGYF----------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 334 AAFAASEAAAGREAQAVDQRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 33/121 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + +++ ++ RF + G++++ V K+L Sbjct: 1 MPEGHSIHRLAGQFRVLLGGQVLSA---SSPQGRF---AAGATRLDGQRLVAVRVHGKHL 54 Query: 61 LIEL------------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 + + + VHLG+ GS+ + P H Sbjct: 55 FLGFAPADLKVASVVAVTEGGSRGAISEDALTWLHVHLGIYGSWRFTGDAV---FHEPLH 111 Query: 97 N 97 Sbjct: 112 W 112 >gi|254482652|ref|ZP_05095890.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] gi|214037011|gb|EEB77680.1| Formamidopyrimidine-DNA glycosylase N-terminal domain superfamily [marine gamma proteobacterium HTCC2148] Length = 132 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 69/144 (47%), Gaps = 12/144 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + +K+ V + + LR+ P +G++I V RRAKYL Sbjct: 1 MPELPEVETTRRGVEPHVKDQRVKRLLVREGRLRWPIPPDLPGLLQGQRIERVERRAKYL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L +++VHLGMSGS + S + +H+H I L + YNDPR Sbjct: 61 LFHTAAG-ALLVHLGMSGSLRLVPPSQ----QPARHDHFDIELAGGNVLR-----YNDPR 110 Query: 121 RFGFMDLVETSLKYQYPPLRTLGP 144 RFG V + L LGP Sbjct: 111 RFGCCLWVAHGE--SHALLENLGP 132 >gi|269977888|ref|ZP_06184842.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] gi|269933854|gb|EEZ90434.1| formamidopyrimidine-DNA glycosylase [Mobiluncus mulieris 28-1] Length = 389 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 41/237 (17%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 + M G F + V + L N + P R Sbjct: 184 HFADRWFL-----MPGQFRVFAPVGT----------VRLRLMNPHGVADL----SGPNRC 224 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 +D +T LGP+P + + + + +L++Q ++AG+GN Sbjct: 225 ELLDWAQTQAIA-----ARLGPDPLRPDARFTHFVARAATRKKGIGESLMDQNVIAGVGN 279 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY EAL+ A+LSP R + + L ++ + + + +++G + Sbjct: 280 IYRAEALFAARLSPFVPAREVSER------KLRRVWDWLVEYMARGVESGRITTIGREDA 333 Query: 243 DGSIGYF----------QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + VY + G PC+ CG +R V GR ++C CQ+ Sbjct: 334 AAFAASEAAAGREAQAIDRRYYVYQRDGRPCV-RCGATVRLAVVGGRKLYWCPRCQR 389 Score = 44.1 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 33/121 (27%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + +++ ++ RF + G++++ V K+L Sbjct: 1 MPEGHSIHRLAGQFRVLLGGQVLSA---SSPQGRF---AAGATRLDGQRLVAVRVHGKHL 54 Query: 61 LIEL------------------------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH 96 + + + VHLG+ GS+ + P H Sbjct: 55 FLGFAPADLKVASVVAVTEGGSRGAISEDALTWLHVHLGIYGSWRFTGDAV---FHEPLH 111 Query: 97 N 97 Sbjct: 112 W 112 >gi|313159416|gb|EFR58779.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 276 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 28/294 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE R ++ TVTD+ +F + P + A GK + Sbjct: 1 MLEIPESYSFARQAADMLSGRTVTDVFNATHPHKFTWYLGDPADYRARLVGKTVRAAEGH 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + L+ I + G++ + A + P + I+ +++ +Y Sbjct: 61 GAFIDLLLDDEAHIALSDGVNLRYH------APGAEVPPKYQLLIAFDDDSFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--HKKNSNLKNALLNQ 174 F + Y P P D++F+ K N + K L + Sbjct: 115 GGIIAF------RKNFDNPYYLGALSKPSPLDDAFDEACFGRLLSDAKSNLSAKAFLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+++ + P RK +L L ++ ++ L D D GG Sbjct: 169 QRIPGLGNGVLQDILFKSHIHPKRKLATLGDAE------LGRMYSSVKSTLRDMADRGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S EPC CG +I + G + +YC CQ Sbjct: 223 DTE--KDLLGKPGGYKTLLS-KNTFAEPC-PGCGGVIVKEAYLGGAVYYCPVCQ 272 >gi|145610627|ref|XP_001410525.1| hypothetical protein MGG_11447 [Magnaporthe oryzae 70-15] gi|145018007|gb|EDK02286.1| hypothetical protein MGG_11447 [Magnaporthe oryzae 70-15] Length = 359 Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 35/249 (14%) Query: 62 IELEGNLSIIVHLGMS-----GSFIIEHT------------SCAKPIKNPQHNHVTISLT 104 ++ +++HLGM+ G F I P++ + + Sbjct: 3 FVMDKAPHLVMHLGMTATHNKGWFHIRGARTAYTNYYKKQNPDEADQWPPKYWRFHLEVQ 62 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLK--YQYPPLRTLGPEPADNS--FNAIYLTHQF 160 + T + D RRFG + LV+ ++ PL GP+P ++ F A YL + Sbjct: 63 DGT-----AAAFTDARRFGRVRLVDCPGATIRKHSPLVENGPDPVVDADVFTAEYLLAKM 117 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 + +K LL+Q +++G+GN E L++A+L P + + + +L Sbjct: 118 RSRRVPVKALLLDQAVISGVGNWVADEVLFQARLHPEQLSHEFSDEQ------VARLHGT 171 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS 280 I+ V + A D S + + + A S +TGE G+ + + GR+ Sbjct: 172 IRDVCVLACDKLADSDLFPDDWLFNHRWGKGAAS---RTGEQARLPGGERLAFLTVGGRT 228 Query: 281 TFYCTYCQK 289 + Y QK Sbjct: 229 SCYAPELQK 237 >gi|254444020|ref|ZP_05057496.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] gi|198258328|gb|EDY82636.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] Length = 266 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 111/291 (38%), Gaps = 29/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL--RFDFPHHFSAATRGKKIIDVSRRAK 58 MPEL EV ++ LH + R + G ++ K Sbjct: 1 MPELAEV-FYHSSIWKRSCGERFQLAWLHGEARCCRLLERSRLVDSLDGVTLLAGYTHGK 59 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 +L G + HLGM+GS C + +H+H+ I + +T +++ D Sbjct: 60 RMLFAFSGGAFLEAHLGMTGSLH----RCEVDCEEGKHDHLAIRSSEST------LVFRD 109 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL-KNALLNQKIV 177 PR+FG + L L PEP F ++ ++ K LL+Q + Sbjct: 110 PRKFGKLALHFADEGDLPQWWNELPPEPHAKGFTRERFGPLLARRQGSVLKALLLHQDLF 169 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+GN E LWRA++ P R+ SL + L L QE + V +A+ G+ Sbjct: 170 PGVGNWMADEILWRARIRPDRRLGSLSKGE------LDALFQETRWVCREAVRIIGTDYT 223 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D F++ + K G C + ++R GR+T + Q Sbjct: 224 DPPDSW----LFKHRW----KDGGIC-PVSQKNLQRDTVGGRTTCWSPAVQ 265 >gi|68535516|ref|YP_250221.1| putative endonuclease VIII [Corynebacterium jeikeium K411] gi|68263115|emb|CAI36603.1| putative endonuclease VIII [Corynebacterium jeikeium K411] Length = 281 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 104/307 (33%), Gaps = 47/307 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TV + P + + G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVRHTDIR-------VPRFATESFDGEEVRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+ I HL M G + I V +T ++ ++ +D Sbjct: 53 FMHV-GDRVIHTHLKMEGVWAIHRAGQRWRRPGYSARIVLRFSPQHTGGEEIELVGHD-- 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF----NAIYLTHQFHKKNSNLKNALLNQKI 176 GF+ + + Q + LGP+ + + + L ALL+QK Sbjct: 110 -LGFVRVFNFADYPQV--IAHLGPDILAEDWQDGGREEAIGRILQRPERTLGAALLDQKN 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y E ++ + P K + + T L + + ++ + G Sbjct: 167 VAGIGNEYRAEVMFLVGMHPEVKVGQVGEVGVTKTIDLARRVMWDNRLEPHRVFTG---- 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---------------RST 281 V+G+ G+ C CG I++ G R Sbjct: 223 ---------DRRAGQTNWVFGRAGKAC-RRCGTAIQQSTLGGRWAGGDPDLDSAELERII 272 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 273 WWCPNCQ 279 >gi|199594640|gb|ACH90784.1| DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia] Length = 155 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 12/167 (7%) Query: 17 VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGM 76 ++ V + L R +LR+ P + G++I D+ RRAKYLL++ + ++HLGM Sbjct: 1 HLQGRRVHGVILRRADLRWPIPPEVAELLPGQRIEDIRRRAKYLLLDTALGSA-VLHLGM 59 Query: 77 SGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQY 136 SGS + H+HV ISL N + +NDPRRFG + + Sbjct: 60 SGSLRVLPGDTPL----RAHDHVDISLDNGR-----LLRFNDPRRFGSLLWQPAGEIHPL 110 Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 EP D +F+ YL + +++ +K L++Q +V G+GNI Sbjct: 111 LLGLGP--EPLDAAFDGDYLFARSRGRSAPVKTFLMDQAVVVGVGNI 155 >gi|260579736|ref|ZP_05847595.1| endonuclease VIII [Corynebacterium jeikeium ATCC 43734] gi|258602166|gb|EEW15484.1| endonuclease VIII [Corynebacterium jeikeium ATCC 43734] Length = 281 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 104/307 (33%), Gaps = 47/307 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M TV + P + + G+++ V K+L Sbjct: 1 MPEGDSVLQLSNRL-QWMTGRTVRHTDIR-------VPRFATESFDGEEVRRVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + G+ I HL M G + I V +T ++ ++ +D Sbjct: 53 FMHV-GDRVIHTHLKMEGVWAIHRAGQRWRRPGYSARIVLRFSPQHTGGEEIELVGHD-- 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSF----NAIYLTHQFHKKNSNLKNALLNQKI 176 GF+ + + Q + LGP+ + + + L ALL+QK Sbjct: 110 -LGFVRVFNFADYPQ--AIAHLGPDILAEDWQDGGREEAIGRILQRPERTLGAALLDQKN 166 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y E ++ + P K + + T L + + ++ + G Sbjct: 167 VAGIGNEYRAEVMFLVGMHPEVKVGQVGEVGVTKTIDLARRVMWDNRLEPHRVFTG---- 222 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG---------------RST 281 V+G+ G+ C CG I++ G R Sbjct: 223 ---------DRRAGQTNWVFGRAGKAC-RRCGTAIQQSTLGGRWAGGDPDLDSAELERII 272 Query: 282 FYCTYCQ 288 ++C CQ Sbjct: 273 WWCPNCQ 279 >gi|160891963|ref|ZP_02072966.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] gi|156858441|gb|EDO51872.1| hypothetical protein BACUNI_04422 [Bacteroides uniformis ATCC 8492] Length = 277 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGNPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S I P + + ++ +++ +Y Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGDEI--PANYQLLLTFNDDSFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLN 173 GF+++ S + +Y L P + + KK + K L Sbjct: 115 ------GFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLAT 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + + G+GN + L+ A+++P +K L N L ++K L+D GG Sbjct: 169 NQHIPGVGNGVTQDILFNARINPKQKVLLLSDNQKEV------LFNALKKTLVDMTSEGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 223 RDTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|317480425|ref|ZP_07939522.1| zinc finger protein [Bacteroides sp. 4_1_36] gi|316903417|gb|EFV25274.1| zinc finger protein [Bacteroides sp. 4_1_36] Length = 277 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGDPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S K P + + ++ +++ +Y Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGD--KIPANYQLLLTFNDDSFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLN 173 GF+++ S + +Y L P + + KK + K L Sbjct: 115 ------GFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLAT 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + + G+GN + L+ A+++P +K L N L +++ L+D GG Sbjct: 169 NQRIPGVGNGVTQDILFNARINPKQKVLLLSDNQKDV------LFNALKETLVDMTFEGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 223 RDTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|270296381|ref|ZP_06202581.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] gi|270273785|gb|EFA19647.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D20] Length = 277 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 31/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + + + T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVITLSKQVNNALSGKTITQVFNATKPHKFTFYNGEPSEYGKLLVGKTILSSEGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L N+ + + G+S + + S I P + + ++ +++ +Y Sbjct: 61 GMFVNFNLSDNVIMNIGDGVS----VRYYSAGDEI--PANYQLLLTFNDDSFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETS-LKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLN 173 GF+++ S + +Y L P + + KK + K L Sbjct: 115 ------GFINVYPDSYIDNKYYKLSRESISPLSDKYTEAEFEKLVAEAKKTLSAKALLAT 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 + + G+GN + L+ A+++P +K L N L +++ L+D GG Sbjct: 169 NQRIPGVGNGVTQDILFNARINPKQKVLFLSDNQKEV------LFNALKETLVDMTFEGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + G+ G ++ S KT + PCL CG I + G S +YC CQ+ Sbjct: 223 RDTQT--DLYGNAGGYKTILSA--KTWKNPCL-RCGSTIIKEAYMGGSVYYCPTCQQ 274 >gi|310828563|ref|YP_003960920.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] gi|308740297|gb|ADO37957.1| Formamidopyrimidine-DNA glycosylase-like protein [Eubacterium limosum KIST612] Length = 277 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 32/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I L ++K + + +F F P G K+ + Sbjct: 1 MLELPESYTIAGQLDEIVKGKQIEQVVAGASPHKFAFFNGEPEACRGQLLGMKVDRATSY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ IE G+ +++ G++ ++ K P+ + + ++ + + +Y Sbjct: 61 GGYVEIEF-GDKRLLLGDGVNIRYL------EAKEKKPKKHQLLLTFEDESALVFSVAMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKKNSNLKNALLNQ 174 E Y + P P FN + KKN++ K L + Sbjct: 114 G-----AIWAYTEGENDNYYHQVAREKPSPLSGEFNWEWFEGIVAAAKKNTSAKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+ A+++P K L + L +L ++ L GG Sbjct: 169 QRIPGLGNGCLQDILFNARVNPRTKLEYLTEEE------LSRLFDSVKATLHQMTVKGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G G +++ + Y PC CG I + G S +YC CQ Sbjct: 223 DTE--KDIFGMKGGYKSILSKNTYK---APC-PVCGGAIVKEAYLGGSVYYCPNCQ 272 >gi|255020515|ref|ZP_05292579.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] gi|254970035|gb|EET27533.1| Formamidopyrimidine-DNA glycosylase [Acidithiobacillus caldus ATCC 51756] Length = 268 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 108/291 (37%), Gaps = 27/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E+ R+ L + + + + + ++ D S A +G++I D+ R + Sbjct: 1 MAELPEIELFRQKLRRNVLHKRLGLVQMRNGKGEIQDDGAGLASDALKGREITDLYRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL EL+G +++ LG S +E P + + + N + R+ Sbjct: 61 YLFWELDGREILVLQLGGELSVEVER-GAPTPAEGGDEPRAQLEIQINAHM---RLRLQG 116 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPAD-NSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 + + L++ L LGP+P +L ++ S L+N LL+ + Sbjct: 117 TQLGNRLRLLD--ESSDVDFLTKLGPDPLLLPDGARSHLREALARRRSALRNVLLDDAFL 174 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G+G ++ E L++A L P R +L + + E + + Sbjct: 175 PGLGPVWADEILFQAGLRPDRTVPTLTEEERERLLEQIARVIERALRSQAKVPLLPKTFL 234 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG CG + + GR+ +C CQ Sbjct: 235 TRHREDGH------------------CPGCGGALETLSVGGRNALFCPACQ 267 >gi|189467099|ref|ZP_03015884.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] gi|189435363|gb|EDV04348.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 111/295 (37%), Gaps = 27/295 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + V+ T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVLTLSKQANDVLSGKTITQVFNATKPHKFTFYSGDPLEYGKLLVGKTILSSKGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ L GN+ + + G+S + K P + + ++ + + +Y Sbjct: 61 GMFVDFYLSGNVIMNIGDGVSARYY------NPGDKVPANYQLLLTFKDESFLVFTVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTH--QFHKKNSNLKNALLNQ 174 + + + +Y + P +++ F KK K L + Sbjct: 115 GFISAYP-----DAVIDNKYYTISRESISPLSDAYTEAEFEKLFAFAKKTLTAKALLATE 169 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + L+ A + P +K L K +L+K +++ + G Sbjct: 170 QRIPGVGNGVTQDILFNAGIHPKQKVFDLSDGQ---KGVLFKSLKDTLMAMTS-----GR 221 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G ++ S KT + CG +I + G S +YC+ CQK Sbjct: 222 GRDTQTDLYGNEGGYKTILS--SKTWKNPCPRCGSVIVKEAYLGGSVYYCSECQK 274 >gi|254820987|ref|ZP_05225988.1| formamidopyrimidine DNA-glyxosylase [Mycobacterium intracellulare ATCC 13950] Length = 239 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 96/257 (37%), Gaps = 21/257 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-NLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPELP+VE RR L + + + +H LR + G + R K+ Sbjct: 1 MPELPDVEGFRRQLAATLPRRRIRHVQVHDPGILRNTTGQALARRLTGHRFAGPRRHGKW 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 L++ + ++++H GM+G A + + +SL + Y D Sbjct: 61 LVLPTD-GPALLIHSGMTGRPYYAPDGAAHD----PYERLVVSLDGG------ELRYADL 109 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVA 178 R+ + L + + + GP+ ++ LK L++Q ++A Sbjct: 110 RKLRGVWLADDADDIGHITGPQ-GPDALGLGLREFRAVLASRSARSRQLKPTLMDQSVLA 168 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN+ V E WRAK P L D + L + +VL A+ G LR Sbjct: 169 GLGNLLVDEICWRAKTRPTVAVADLGD------DDVKALHAAMTRVLRTAVRH-GRVLRT 221 Query: 239 YVHIDGSIGYFQNAFSV 255 V G + V Sbjct: 222 AVRHGRVPGLPRWLTRV 238 >gi|297520507|ref|ZP_06938893.1| endonuclease VIII [Escherichia coli OP50] Length = 197 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 82/220 (37%), Gaps = 27/220 (12%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 H + G + + T + PQ V + +D ++++ Sbjct: 1 SHNQLYGVWRVVDTG-----EEPQTTRVLRVKLQTADKTILLYSASD------IEMLRPE 49 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGNIYVCEA 188 +P L+ +GP+ D + + + +N LL+Q +AG+GN E Sbjct: 50 QLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEI 109 Query: 189 LWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGY 248 LW+ L+ K + L N D L + EI + + R V + G Sbjct: 110 LWQVGLTGNHKAKDL---NAAQLDALAHALLEIPRFS--------YATRGQVDENKHHGA 158 Query: 249 FQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + GEPC CG +I + + R ++C CQ Sbjct: 159 L-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 196 >gi|322698696|gb|EFY90464.1| formamidopyrimidine-DNA glycosylase [Metarhizium acridum CQMa 102] Length = 305 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 31/242 (12%) Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPI------------KNPQHNHVTISLTNNTNTKK 111 ++ +++H GM+G I A P+ I + Sbjct: 1 MDKPPHLVMHFGMTGWVHIRGEQTAYTNYYKKTKDSELKNWPPKFWKFQI---KTEGKPE 57 Query: 112 YRVIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPA--DNSFNAIYLTHQFHKKNSNL 167 V + D RRFG + LV+ +Y PL+ GP+P + F YL + ++ + Sbjct: 58 VEVAFTDARRFGRVRLVDCPGADIRKYTPLKENGPDPVIDTDRFTEEYLRGKMQARHVPV 117 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLID 227 K LL+Q +++GIGN E L++AKL P + + S + KL + I+ V Sbjct: 118 KALLLDQAMISGIGNWVADETLYQAKLHPEQYSDSFSDAE------IKKLYECIRYVCQT 171 Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 A+D G S + H F + + GK L N G+ + I GR++ Y Sbjct: 172 AVDKLGDSDQFPEHWL-----FNHRWGKGGKGSSSKLPN-GEKLAFITVGGRTSCYAPEV 225 Query: 288 QK 289 QK Sbjct: 226 QK 227 >gi|218198635|gb|EEC81062.1| hypothetical protein OsI_23872 [Oryza sativa Indica Group] Length = 422 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 28/220 (12%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 +I HL S+ + +++ + L + + D RRF + L E Sbjct: 115 LIGHL----SWDGRSVVSSTDDWPSKYSKFFVQLDDG-----LEFSFTDKRRFARVRLFE 165 Query: 130 TSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEAL 189 PP+ LGP+ ++ +K +K LL+Q ++GIGN E L Sbjct: 166 DPE--TVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQSFISGIGNWIADEVL 223 Query: 190 WRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 ++++ P++ SL + + L Q IQ+V+ A++ +D F Sbjct: 224 YQSRTHPLQIASSLSR------ESCEALHQSIQEVVKYAVE-----------VDADCDCF 266 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + + + G+ GQ I I GR+T Y QK Sbjct: 267 PVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQK 306 >gi|220916970|ref|YP_002492274.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-1] gi|219954824|gb|ACL65208.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter dehalogenans 2CP-1] Length = 278 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 92/272 (33%), Gaps = 20/272 (7%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 V L A G+ + K+LL+ L G L + HL M+GS Sbjct: 20 GKPVVRFETVLPRLARVAAD---APVVGRTVERAEAVGKHLLLHLSGGLVLRTHLRMNGS 76 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + P + P + + + + + + + ++ L Sbjct: 77 WHLYRPGA--PWRRPASAMRVLLEVPDAVAVAFDLPVA--------EWLRAADLGRHRAL 126 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+ +F+A + + + +AL++Q +AG GN E L+ A +SP R Sbjct: 127 SRLGPDLLSPAFDAAEAERRLRARGGLAVADALVDQAALAGAGNELKSEILFVAGVSPFR 186 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 + L + + + GG + VYG+ Sbjct: 187 RVEDLDDGELRAVIATARRLIG---ENVPPPGPGGVETWRGGRRTTRRMNPRERTWVYGR 243 Query: 259 TGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 G PC CG I Q + T++C CQ Sbjct: 244 GGRPC-RRCGAPIAFARQGPHAQGTWWCPRCQ 274 >gi|197122194|ref|YP_002134145.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] gi|196172043|gb|ACG73016.1| DNA-(apurinic or apyrimidinic site) lyase [Anaeromyxobacter sp. K] Length = 278 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 26/275 (9%) Query: 20 NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGS 79 V L A G+ + K+LL+ L G L + HL M+GS Sbjct: 20 GKPVVRFETVLPRLARVDAD---APVVGRTVERAEAVGKHLLLHLSGGLVLRTHLRMNGS 76 Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 + + P + P + + + + + + + ++ L Sbjct: 77 WHLYRPGA--PWRRPASAMRVLLEVPDAVAVAFDLPVA--------EWIRAADLGRHRAL 126 Query: 140 RTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIR 198 LGP+ +F+A + + + +AL++Q +AG GN E L+ A +SP R Sbjct: 127 ARLGPDLLSPAFDAAEAERRLRARGGLAVADALVDQSALAGAGNELKSEILFVAGVSPFR 186 Query: 199 KTRSLIQNNGTPKDILYKLIQEIQKVLIDAID---AGGSSLRDYVHIDGSIGYFQNAFSV 255 + L + L +I ++++ + + GG + V Sbjct: 187 RVEELDEA------ALRAVIATARRLIGENVPPPGPGGVETWRGGRRTTRRMNPRERTWV 240 Query: 256 YGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 YG+ G PC CG I Q T++C CQ Sbjct: 241 YGRGGRPC-RRCGAPIAFARQGPHAHGTWWCPRCQ 274 >gi|160881513|ref|YP_001560481.1| formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] gi|160430179|gb|ABX43742.1| Formamidopyrimidine-DNA glycolase, H2TH DNA binding [Clostridium phytofermentans ISDg] Length = 273 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 115/296 (38%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE ++ + + + + + ++ F + P ++ GK I+ Sbjct: 1 MLEIPESIVLSKEINESLVGKVIRYVKANQSPHSFAWYHGNPENYDELLSGKTIVKARPC 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 L I+ + + I+ G S + A K P+ N + I +++ ++Y Sbjct: 61 GGMLEIKAD-DCKIVFTDGTSIRYY------ADRNKAPKKNQLYIEFEDDSALVVTVMMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLNQ 174 G E K Y P P F+ Y + K NL K L + Sbjct: 114 G-----GIWAFAEGEFKNNYYQGAIDKPHPLSEEFDYTYFRSLYTDKCENLSAKAFLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+ + + P RK +++ + L I+ VL D ++ GG Sbjct: 169 QRIPGLGNGVLQDILFTSGIHPKRKMKNVEEEEFLN------LFSAIKSVLRDMVEGGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGE-PCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 I G G + S KT PC + CGQ IR+ G + ++C CQK Sbjct: 223 DTE--KDIFGEEGKYLTYLS--RKTYLTPC-TKCGQEIRKANYMGGTIYFCENCQK 273 >gi|256832270|ref|YP_003160997.1| Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685801|gb|ACV08694.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Jonesia denitrificans DSM 20603] Length = 284 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 111/325 (34%), Gaps = 80/325 (24%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L V+ ++T + L ++ D F+ + DV AK+L Sbjct: 1 MPEGDTVLSVANRLHEVLGGHSLTRVDLRWPSVSVD---AFNRGV----VHDVDAYAKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +S+ HL M G + + T + + ++ + T Sbjct: 54 FVRFASGVSLHTHLRMDGVWRVVPTGSREAQASSPTVRAVLATSEWTCV---------GY 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK------------------ 162 G MD+V T+ + + LGP+ + +L Q Sbjct: 105 ELGMMDIVPTARERD--LIAHLGPDILADQCVPTHLLDQARADPARFLAPRRAHTSLLVS 162 Query: 163 ---------------KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + LL+Q +V+GIG I++ E L+ ++SP+R + Sbjct: 163 DRDWIEALSRFAAQPQTRPIGETLLDQSVVSGIGTIFMAEGLFTHRISPMRP-----LAD 217 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 +L + + + ++ + V+ + G+PC+ C Sbjct: 218 TPLVPLLASIRGHLIRGVVRPVA-------------------GRRIHVHSRRGQPCM-RC 257 Query: 268 GQMIRRIVQA----GRSTFYCTYCQ 288 G I R + R FYC CQ Sbjct: 258 GTPIARRLVGPPTAQRPAFYCPTCQ 282 >gi|313898751|ref|ZP_07832286.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] gi|312956635|gb|EFR38268.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] Length = 273 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 109/299 (36%), Gaps = 36/299 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ + + + +F F P + + K + V R Sbjct: 1 MIELPEARTIAADLRKEVLGKTIQSVSGNFTDHKFTFYYGNPDTYHDRLKNKAVTAVVER 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVTISLTNNTNTKKYR 113 + Y+ +E+E + + + P + + + + T+ + Sbjct: 61 SFYVELEIEDEV-----------LTFRDGANIRWFAKPQQFKKSKLLLMFTDGSCLHVTT 109 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNAL 171 +Y F + + + +L D F + H + +K L Sbjct: 110 SMYAAIHVFPKTEGAQDAYYEAELKSCSL----LDECFTYDNFLSKLHHETEKLSVKAFL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ GIGN + L+ A L P RK +L KD + L +++ L + Sbjct: 166 ATKQRFIGIGNGVCQDILFYAGLHPKRKMNTLT------KDEINTLFFSMKQTLQQMVQE 219 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSV-YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG +I G G + S + K G P CG I++ G S +YC +CQK Sbjct: 220 GGR--DSEKNIYGEKGGYHCVMSAGHYKDGCP---KCGGRIQKEQYLGGSIYYCPHCQK 273 >gi|323451651|gb|EGB07527.1| hypothetical protein AURANDRAFT_14007 [Aureococcus anophagefferens] Length = 261 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 91/286 (31%), Gaps = 31/286 (10%) Query: 6 EVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELE 65 E + R + N RF +A GK+ + K L Sbjct: 3 EGHSVHRVATRHRSKLVGKTFRASSPNARF---AEGAALIDGKEFAGIEAVGKNLFAWFG 59 Query: 66 GN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 + + VH GM+G++ + A + + ++ + + + R Sbjct: 60 SGADEVCVHVHFGMAGNWAVFD--AADEPETTATTRLRLAGHGVVSHLSAMTVAHGTRDG 117 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 + + R LG +P + + L + ++ +++Q G GN Sbjct: 118 LYAEKR-----------RKLGEDPLRDDADPERLWGKVAASKKSIGALVMDQSCFTGPGN 166 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY E L++A + P R SL + D + ++L G D Sbjct: 167 IYRAEILFKAGVHPDRPGNSLSR------DEFDLIWHHTVELLKRGYATGSILTVDKEDE 220 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 Y Q +Y K P CG + A R+ + C CQ Sbjct: 221 RK---YGQIRRYIYNKAKCP---KCGSRVVSWDIAARTAYACETCQ 260 >gi|50555437|ref|XP_505127.1| YALI0F07623p [Yarrowia lipolytica] gi|49650997|emb|CAG77934.1| YALI0F07623p [Yarrowia lipolytica] Length = 446 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 116/362 (32%), Gaps = 86/362 (23%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP---HHFSAATRGKKIIDVSRRA 57 MPEL EV V + + + F A +G+ I +VSR Sbjct: 1 MPELGEVAHAASVFAKFATGKKVAEADVQPDKIVFGSETGHEALQKALQGRVITNVSRHG 60 Query: 58 KYLLIELEGNL--SIIVHL----------------GMS---------------------- 77 KY + L+G+ ++++H M Sbjct: 61 KYWWLTLDGDADNAVLLHFGMTGYISVKGHRTHYIMMENGGDKKARDRLDRIRGDGGVVE 120 Query: 78 -----GSFIIEHTSCAKPIK------------NPQHNHVTISLTNNTNTKKYRVIYNDPR 120 G II P Q + T ++ + D R Sbjct: 121 EKAANGQSIIAANGGDIPEDVSMLEELAEEELEQQTWPPRFVKMDLTLEDGTKLAFYDAR 180 Query: 121 RFGFMDLVETSLK---YQYPPLRTLGPE----PADNS-------FNAIYLTHQFHKKNSN 166 R + L + Y+ P++ LGP+ P D + + K + Sbjct: 181 RLARVKLFTIAEPLDIYKVDPMKKLGPDYSKSPDDEHTPAALKPLDLDAFKAKIQAKKAP 240 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 +K+ LL+Q + +G+GN E L+ +++ P R L+++ + +L ++ + Sbjct: 241 IKSVLLDQSLFSGVGNWVADEILYHSRVHPARMCNLLLESQ------IDELYTQLVHICQ 294 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTY 286 + G++L ++ + + + + G + + GR++ +C Sbjct: 295 FVVKVEGNTLLFPLNWLMLNRWGKRN------KNKKSYTLEGYEVDHVTVGGRTSSFCPE 348 Query: 287 CQ 288 Q Sbjct: 349 LQ 350 >gi|303286994|ref|XP_003062786.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] gi|226455422|gb|EEH52725.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] Length = 477 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 96/297 (32%), Gaps = 44/297 (14%) Query: 7 VEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEG 66 V + + + N RF + A K + V K L + Sbjct: 7 VHRVAQAHRRALVGKKFKA---SSPNGRFV---DGARAIDDKALARVEAIGKNLFYFFDR 60 Query: 67 -------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + + VH GMSG F + H + P P + L + Sbjct: 61 GEGGRGGGSERHGHHVMHVHFGMSGRFSV-HAASDPPAATPT---TRLKLEGHGRVAMLS 116 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN 173 + D L++ S LG +P A L +F ++ AL++ Sbjct: 117 AMVVD--------LMDESGFEAKRV--ALGQDPLREDACADTLWEKFTASRKSVGLALMD 166 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q + AG+GNIY E L++A + P + R L + + L + ++L G Sbjct: 167 QSMFAGVGNIYRAEILFKAGVHPEQPCRDLDRG------VFDSLWRHSVELLQRGYSTGS 220 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYC-TYCQK 289 D +G VY + CG + A R+ + C CQK Sbjct: 221 ILTVDPEEAL-VLGEPWTRRYVY---NQSSCGRCGGKVLTWEMANRTVYCCGGSCQK 273 >gi|254482665|ref|ZP_05095903.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] gi|214037024|gb|EEB77693.1| Formamidopyrimidine-DNA glycosylase H2TH domain family protein [marine gamma proteobacterium HTCC2148] Length = 111 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++QKIV G+GNIY EAL+ + + P R + + +L +++ VL AI+ Sbjct: 1 MDQKIVVGVGNIYANEALFLSGIRPNRAAGRISEAR------YQRLADQVKLVLTSAINH 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD+V DG GYF VYG+ GEPC C + ++ + R+T YC CQ+ Sbjct: 55 GGTTLRDFVGGDGKPGYFAQQLYVYGRGGEPCKH-CSEKLQESRISQRTTVYCVACQR 111 >gi|296425340|ref|XP_002842200.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638460|emb|CAZ86391.1| unnamed protein product [Tuber melanosporum] Length = 394 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 10/216 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF--DFPHHFSAATRGKKIIDVSRRAK 58 MPEL +V + L + T+ ++ + F F +A G+ ++D + Sbjct: 1 MPELVQVARLAGRLKKHLAGKTLKNVTAMDDPVVFKDTTAKKFISAVEGRTVLDAKSLGR 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-----SLTNNTNTKKYR 113 YL +E++ ++HLG++G + + + + + Sbjct: 61 YLWLEMDKPPHPVMHLGIAGWVFFKSDPYSHYYAREKPEFTNWPPKGEIFHLKIHGSQDE 120 Query: 114 VIYNDPRRFGFMDLVETSLKY--QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 ++ DPRR G + L++ S K + PL LGP+P +L +F K+S + L Sbjct: 121 AMFADPRRLGRLRLMDCSSKDIPKQAPLNDLGPDPLQTEITMEWLRQKF-TKHSPARLLL 179 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 +QK +AG G+ E L++A++ P + R Sbjct: 180 ADQKNIAGFGSWMSEEILYQARIHPEFQGRKFNDGQ 215 >gi|162455413|ref|YP_001617780.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] gi|161165995|emb|CAN97300.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] Length = 290 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 25/292 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE P++E + L + V L P A G +I V+RRA Sbjct: 1 MPERPDLEYVVPILARELAGAAVAAARAENSVVLHVLLPERLDALLPGAEIRRVARRAHA 60 Query: 60 LLIELEGNLSI--IVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 ++ EL+G ++ ++ ++G F I + + + SLT + Sbjct: 61 VVFELDGARALDLVISPMLAGRFSITRPGETRIPTD-----LAFSLTLGDG---RELRVR 112 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS-FNAIYLTHQFHKKNSNLKNALLNQKI 176 D + + ++ + P L+ +G + D F + K+ L++ Sbjct: 113 DDVQMSKVYVLARGDFDRLPGLQRVGLDVLDPRVFTQEAFRSAARGRRDLAKDFLMDGTA 172 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 + +G+ Y E L+ A++ P +SL + +L I +VL DA Sbjct: 173 LDSMGDSYADEVLFEARIHPKATVQSLSEEETD------RLHAAIARVLGDATRTIA--- 223 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 ++ V G+ G+PC CG +RR G +C CQ Sbjct: 224 ---RRAPALDERLRDFLKVRGRPGQPC-PRCGDKLRRASVHGHDAIFCPACQ 271 >gi|89893499|ref|YP_516986.1| hypothetical protein DSY0753 [Desulfitobacterium hafniense Y51] gi|89332947|dbj|BAE82542.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 349 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 103/293 (35%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + R L +KN + + K +F P + A G +I Sbjct: 69 MLELPEVLTLVRQLNESVKNRRIRKVWPPTKAHKFCWYNGEPEEYDKALSGSRIAGAEGF 128 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + + V+ G++ + K P + + + L + +Y Sbjct: 129 GTFAELIFDNGRKLCVNDGVN--LRLMPAG-----KVPGNYQLMMELDDGQALVFTVAMY 181 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQK 175 + S Y P F A YL K + + K L ++ Sbjct: 182 GGIFE------HDGSYDNHYYLASRNSTSPFAQDFPAYYLRLFSESKPTLSAKAFLATEQ 235 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + + L+ A + P RK +L Q KL+Q + KVL D GG Sbjct: 236 RFPGIGNGTLQDILFEAGIHPKRKIGTLEQWERD------KLLQAVMKVLNDMTKHGGRD 289 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S G C CG I + G S ++C CQ Sbjct: 290 TE--KDLFGVFGGYKTKMS-KNTAGTNCG-QCGGTILKENYLGGSVYFCPECQ 338 >gi|269956039|ref|YP_003325828.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304720|gb|ACZ30270.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 278 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 107/310 (34%), Gaps = 57/310 (18%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE ++++ + + L R LR+ A G+ + + K+ L+ Sbjct: 1 MPEGDVLKLTAERL--GAALGGAPLVRAELRWPGIAG--ADLCGRTLRESVAYGKHTLLR 56 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + ++ HL M GS+ + T ++ T + G Sbjct: 57 FDDGRTLHTHLRMDGSWQVRRTGARDAAGRSPAVRAVLATETWTCLGWH---------LG 107 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSF------------NAIYLTHQFH-KKNSNLKNA 170 MDLV T + + + LGP+ F A T + + A Sbjct: 108 MMDLVRT--RDEGMLIGHLGPDVLAPDFVGAPATDGRFDDGAAEGTRRLAVDPARPVCVA 165 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ VAG+G I+ E+L+ +L P L P + L+ +++ ++ Sbjct: 166 LLDQRTVAGLGTIWTAESLFAERLWPWTAVGEL------PTGRVRALLLTAARLVRGSVA 219 Query: 231 AGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------R 279 G G V+G+ PC+ CG I AG R Sbjct: 220 VGR-----------RQGLGAVERRVHGRHHRPCV-RCGTPIALGSTAGPDVRPDQGALER 267 Query: 280 STFYCTYCQK 289 ++C CQ+ Sbjct: 268 VVYWCPVCQR 277 >gi|159489098|ref|XP_001702534.1| predicted protein [Chlamydomonas reinhardtii] gi|158280556|gb|EDP06313.1| predicted protein [Chlamydomonas reinhardtii] Length = 297 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 106/318 (33%), Gaps = 72/318 (22%) Query: 1 MPELPEVEIIRRNLMMVMKNMTV--TDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA- 57 MPELPEVE R + + K T+ + K + P A G+ ++ R+ Sbjct: 1 MPELPEVEAARGLVELGCKGKTILVARVADDEKVINGCTPDELRKALEGRTLLRAHRKGM 60 Query: 58 ------------KYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 KY LE + P+ + + L Sbjct: 61 TGGIVVKGVGVTKYKRAHLESDP---------------------ESWPPRFTKLELELQG 99 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE------PADNSFNAIYLTHQ 159 R+ Y D RRFG + L+ PL LG + P F + Sbjct: 100 GG-----RLAYVDSRRFGRIKLLPGPDPLACEPLCRLGWDVLLQLPPTAAQFGQVVRERV 154 Query: 160 FHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQ 219 + +K LL+Q+ +GIGN E L++A++ P + SL + + L Sbjct: 155 VRAPSLRIKALLLDQEFCSGIGNWVADEVLYQARIHPEQTATSLDDGS------MAALHA 208 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC--------GQMI 271 I++V+ A+ S R F + + + CL G+ I Sbjct: 209 AIREVVGLAVRVEADSDR-----------FPRDWLFHYRRVCLCLWTNKKASQDASGRAI 257 Query: 272 RRIVQAGRSTFYCTYCQK 289 + R++ + Q+ Sbjct: 258 HFVTVGSRTSAFVPAVQQ 275 >gi|332829519|gb|EGK02168.1| hypothetical protein HMPREF9455_01802 [Dysgonomonas gadei ATCC BAA-286] Length = 273 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 109/297 (36%), Gaps = 32/297 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE I R ++ + + +F + P + G++I V Sbjct: 1 MIEIPESNTISRQAETILAGKRIVKVVQATSPHKFTWYNGDPLLYPDILVGREIEGVRGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 +L I + ++ I + G + + + +H + I + + +Y Sbjct: 61 GAFLDILCDEDVKISIGDGTNLKYY-----PSFESHPVKH-QLLIEFDDKSFMAFTVSMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 + E Y L ++ P + F+ Y F KK+ ++K L + Sbjct: 115 GAIYAYKG----EMDNFYHRNSLNSISP--LADKFDRQYFDSIFSNVKKDMSVKALLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L++A L P RK ++ L ++ L D GG Sbjct: 169 QRIPGLGNGVLQDILFKAGLHPKRKISTISDFERGD------LFHCLKVTLQSMTDKGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ G ++ + Y + PC NCG I + G + +YC CQK Sbjct: 223 DTE--KDFYGNFGGYKCLLSKNTYKR---PC-PNCGGEIVKEAYLGGTVYYCPSCQK 273 >gi|310831293|ref|YP_003969936.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] gi|309386477|gb|ADO67337.1| putative formamidopyrimidine-DNA glycosylase [Cafeteria roenbergensis virus BV-PW1] Length = 279 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 32/300 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP----HHFSAATRGKKIIDVSRR 56 MPE PEV L KN + I + P + KI + + Sbjct: 1 MPEGPEVRRTVDYLNKF-KNKILLKITFNSGRYVKHGPFKNFNLIEKDLP-LKITKIDCK 58 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 K++ E N + LGMSG++ K+ +HN+++ + T + + Sbjct: 59 GKFIYFIFENNQVLFNTLGMSGNWQ---------TKDSKHNNISFYFKDIKTT----LYF 105 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK--NALLNQ 174 ND R FG + S++ L LGP+ ++ + KK ++ K ALL+Q Sbjct: 106 NDYRNFGTF--MYQSIEQLNKKLNELGPDILIDTDKLSEFKKKLDKKRNDTKIAVALLDQ 163 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-----GTPKDILYKLIQEIQKVLIDAI 229 K+V+G GN E L+ K+SP R+ ++L T I + + + Sbjct: 164 KVVSGCGNYLRAEVLYHCKISPFREIKNLTDIEIKYIWTTLIKIGWIFYDYEKGIKNKIF 223 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 ++ YV D Y+ + F +Y + +P G ++ + R+ Y QK Sbjct: 224 LKNDKLVKIYVTPDYQDYYYYHNFIIYFQEKDP----QGNIVVKEKLGPRTIHYVPKIQK 279 >gi|168061884|ref|XP_001782915.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665587|gb|EDQ52266.1| predicted protein [Physcomitrella patens subsp. patens] Length = 603 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 89/276 (32%), Gaps = 48/276 (17%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIEL---------------EGNLSIIVHLGMSGSFIIE 83 + A G + + K + + + + +HLGMSGSF + Sbjct: 70 ADGAEAIDGHFLTHIEVHGKNIFYFFTPERVEEEGVLEKVGDDAVVVHIHLGMSGSFRLY 129 Query: 84 HTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG 143 P + + L N + G ++L + LG Sbjct: 130 PFPGPIPREA-----TRLRL-YNEELGFEAHLSASVCDHGNIELYRKK-------ITELG 176 Query: 144 PEPADNSFNAIYLTHQFH--------KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLS 195 P+P + L K ++ L++Q +VAGIGNIY E L+ L Sbjct: 177 PDPLRKDADKELLWASIQHLISEIGQKTKRSIGAVLMDQTLVAGIGNIYRAEILFVVGLH 236 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG---GSSLRDYVHIDGSIGYFQNA 252 P + ++ + L ++ ++ + ++ G D Sbjct: 237 PEQPANTVCRP------TFEFLWEQSKRQMEIGVEVGNIITILPEDSDKPFPKKIKASQL 290 Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VY + + C CG I+ A RS + C CQ Sbjct: 291 RYVYNQ--KACGK-CGGPIKVWTIAQRSVYACEACQ 323 >gi|308276012|gb|ADO25911.1| Formamidopyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis I19] Length = 281 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 43/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L M+ V + P A G+ + V K L Sbjct: 9 MPEGDSIYQLSHRLR-FMEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNL 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G + HL M G++ + P H L + T K+ + Sbjct: 61 FMQI-GEDILHTHLKMEGAWAVYRKG--DRWSKPAHTARVQLLLDGTPQKRSIEVVGFSL 117 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKI 176 F + + LGP+ S+ + + + A+L+Q+ Sbjct: 118 GFVRI----FPACDYPGAIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRN 173 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN Y E + + P + R + D+ L+ + + + + Sbjct: 174 LAGVGNEYRAEICFLCGVHPATRVRDV--------DVDRILLITRRLMWANRL------- 218 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 V + I V+G+ +PC CG I + R ++C +CQ Sbjct: 219 -STVRVTTGIKRLGETTYVFGRNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 275 >gi|225571055|ref|ZP_03780072.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] gi|225160136|gb|EEG72755.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 99/298 (33%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVS 54 M ELPE + R L + TV + +F P + RG+++ Sbjct: 1 MIELPE--ALARAAELDKTIAGKTVAKVYPPSSPHKFCWFNGEPEAYDRQLRGREVQKAE 58 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 ++ + G + + G + P+ + I T++ Sbjct: 59 GFGIFVELRFSGGFGLCFNDG------VNVRLLEPSAGLPEKYQLRIDFTDSWVLIFTVA 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALL 172 +Y G + E + +Y L P + F+ Y + K L Sbjct: 113 MY------GGILCYEHTCANEYYVLSKERLSPLADEFDEEYFRGLLAGVKPGISAKAFLA 166 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 ++ + G+GN + + L+RA + P +K L +L ++ VL + G Sbjct: 167 AEQRIPGLGNGVLQDILFRAGIHPKKKVGKLTAEET------ERLFGSVKGVLAEMSRLG 220 Query: 233 GSSLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G I GS G + + Y PC C I + G S +YC CQ Sbjct: 221 GRDTE--KDIWGSPGKYPTVMSKNTYR---NPC-PICKGEIVKTAYLGGSVYYCPRCQ 272 >gi|326789510|ref|YP_004307331.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] gi|326540274|gb|ADZ82133.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium lentocellum DSM 5427] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + + L + ++ + K +F P ++AA +G ++I V Sbjct: 1 MLELPEVLTVSKQLKNHIVGKKISKVLPPSKVHKFCWYNGEPTEYNAAIKGSEVISVEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ I + ++ G + + ++ + I L +N +Y Sbjct: 61 GIFVEITFSNGYKLCLNDG-------VNVRLVPSNEKTKNFQLLIELEDNLVLVFTVAMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNL--KNALLNQ 174 G + L + S +Y P F Y F + NL K L Q Sbjct: 114 ------GGIFLHDGSYDNEYYLKSKQAISPFSEVFTEHY-HKTFMESKPNLSAKAFLATQ 166 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + G+GN + L+ A + P RK + + + +L+ ++ VL + + GG Sbjct: 167 QRFPGVGNGVSQDILFEAGIHPKRKISTFSEADK------ERLLGKMITVLNEMVQKGGR 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +I G G ++ S G C CG I + G S +YC CQ Sbjct: 221 DTE--KNIFGEKGGYKVRMS-KNTMGLDC-PKCGGKIIKETYLGGSIYYCAQCQ 270 >gi|302330336|gb|ADL20530.1| Putative formamido pyrimidine-DNA glycosylase [Corynebacterium pseudotuberculosis 1002] Length = 273 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 43/299 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + L M+ V + P A G+ + V K L Sbjct: 1 MPEGDSIYQLSHRLR-FMEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 +++ G + HL M G++ + P H L + T K+ + Sbjct: 53 FMQI-GEDILHTHLKMEGAWAVYRKG--DRWSKPAHTARVQLLLDGTPQKRSIEVVGFSL 109 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKI 176 F + + LGP+ S+ + + + A+L+Q+ Sbjct: 110 GFVRI----FPACDYPGAIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRN 165 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +AG+GN Y E + + P + R + D+ L+ + + + + Sbjct: 166 LAGVGNEYRAEICFLCGVHPATRVRDV--------DVDRILLITRRLMWANRL------- 210 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 V + I V+G+ +PC CG I + R ++C +CQ Sbjct: 211 -STVRVTTGIKRLGETTYVFGRNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 267 >gi|325262240|ref|ZP_08128978.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] gi|324033694|gb|EGB94971.1| DNA-formamidopyrimidine glycosylase [Clostridium sp. D5] Length = 273 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 106/294 (36%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV I L + V ++ K +F P ++AA G+K++ Sbjct: 1 MLELPEVLTISSQLRDAVLGKIVREVLPPVKAHKFCWFNGDPAEYNAALEGRKVVSSEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y I E L + + G + K P++ + I L ++T +Y Sbjct: 61 GIYAEIIFEEGLRLCFNDG-------VNVRLLPLKKVPKNYQLLIVLDDDTALVFTVAMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--HKKNSNLKNALLNQ 174 G + + +Y P F K ++K L Sbjct: 114 ------GGIIVHREDYCNEYYEKSRQAVSPFSPEF-EFQFHKMLEECKPGISVKALLAAD 166 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + GIGN + + L+ A++ P RK ++L + +L+ VL + + GG Sbjct: 167 QHFPGIGNGVLQDILFEARIHPKRKLQTLNEEEK------KRLLCCTVGVLQEITEKGGR 220 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ S EPC CG I + G S +YC CQ Sbjct: 221 DTE--KDLFGNPGGYKTKLS-KNTWKEPC-PVCGGAITKEAYMGGSVYYCPVCQ 270 >gi|296118291|ref|ZP_06836872.1| endonuclease VIII [Corynebacterium ammoniagenes DSM 20306] gi|295968849|gb|EFG82093.1| endonuclease VIII [Corynebacterium ammoniagenes DSM 20306] Length = 291 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 104/303 (34%), Gaps = 46/303 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + L M VT + P + ++ G +V K+L Sbjct: 1 MPEGDSVLQLSNKL-QFMVGRQVTRTSIR-------VPRYATSTFTGDYCENVWPYGKHL 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 ++ G + HL M G + I H + K K ++L N R I Sbjct: 53 FMQF-GEQILHTHLKMEGQWSI-HYAGDKWRKPGFTARAVLNLANTP-----RDIELVGH 105 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA----IYLTHQFHKKNSNLKNALLNQKI 176 G +++ + Y + LGP+ D + L + + ++ ALL+Q Sbjct: 106 SLGHVEVYPIANY--YDRIADLGPDILDEQWEEYGRDEALQRILSRPHRSIGAALLDQHN 163 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 VAGIGN Y EA + A + P S+ + ++ +K++ D Sbjct: 164 VAGIGNEYRAEACFIAGIDPRDSVESIGVTR------VESVVDISRKIMWANKD------ 211 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----------RSTFYCT 285 V + + V+G+ + C C I G R + C Sbjct: 212 -SPVRVTTGVRRAGETTYVFGRNNQRC-RRCTTTIYTDRLGGPDAGGEDGELERIIWVCP 269 Query: 286 YCQ 288 +CQ Sbjct: 270 HCQ 272 >gi|255622364|ref|XP_002540275.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] gi|223497337|gb|EEF22108.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis] Length = 223 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/114 (46%), Positives = 78/114 (68%), Gaps = 8/114 (7%) Query: 170 ALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 LL+Q++VAG+GNIYVCEAL+R+ + P +++ + L KL+ I++VL ++I Sbjct: 1 MLLDQQVVAGLGNIYVCEALFRSAIRPDKESGRVT------LPALKKLVPAIREVLSESI 54 Query: 230 DAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 AGGS++RDY G +GYF ++ VYG+ G+PCL CG +RR VQ GRSTF+ Sbjct: 55 AAGGSTIRDYAQPSGELGYFATSWQVYGREGQPCL--CGGTVRRFVQGGRSTFW 106 >gi|325918780|ref|ZP_08180868.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325535007|gb|EGD06915.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 111 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA +SP+R+ + + L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGISPLREAGKVS------LERYRSLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ GEPC CG+ ++ R+T +C +CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGEPC-KQCGRALKHATIGQRATVWCGHCQR 111 >gi|300932502|ref|ZP_07147758.1| formamidopyrimidine-DNA glycosylase [Corynebacterium resistens DSM 45100] Length = 200 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 11/175 (6%) Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA-----IYLTHQFHKKNSNLKNALLNQ 174 R + L+ + LG +P + + + + + + L++Q Sbjct: 30 RGPQWCRLITEVEMEAE--IGKLGADPLRPADPLNLELRDEMFRRLARSRRTIASLLMDQ 87 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLI-QNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 K AG+GNIY E L+R ++P + + +D++ + Q ID + Sbjct: 88 KFFAGVGNIYRAEVLFRLGINPETRGDVASERKEEIWEDLVRLMAYGEQHGRIDTVREQH 147 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + VY + G+PCL CG ++ V GR+ F+C CQ Sbjct: 148 QP--EAMGRAPREDDHGGEVYVYRRAGQPCL-VCGDEVQHAVVEGRNLFWCPKCQ 199 >gi|219666826|ref|YP_002457261.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|219537086|gb|ACL18825.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 281 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 107/293 (36%), Gaps = 28/293 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPEV + R L +KN + + K +F P + A G +I Sbjct: 1 MLELPEVLTLVRQLNESVKNRRILKVWPPTKAHKFCWYSGEPEEYDKALAGSRIAGAEGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + + + V+ G++ + K P++ + + L + +Y Sbjct: 61 GTFAELIFDNDRKLCVNDGVN--LRLMPAG-----KVPENYQLMMELDDGQALVFTVAMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS-NLKNALLNQK 175 G + + S Y P F A YL K + + K L ++ Sbjct: 114 ------GGIFAHDGSYDNLYYLASRNSISPFAQDFPAYYLRLFSESKPTLSAKAFLATEQ 167 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + + L+ A + P RK +L Q KL+Q + +VL + GG Sbjct: 168 RFPGIGNGTLQDILFEAGIHPKRKIGTLEQWERD------KLLQAVIEVLNEMAKLGGRD 221 Query: 236 LRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G G ++ S G C CG I + G S ++C CQ Sbjct: 222 TE--KDLFGVSGGYKTKMS-KNTAGTDCG-QCGGTILKENYLGGSVYFCPECQ 270 >gi|68478421|ref|XP_716712.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|68478540|ref|XP_716652.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|46438325|gb|EAK97657.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] gi|46438390|gb|EAK97721.1| potential formamidopyrimidine-DNA glycosylase [Candida albicans SC5314] Length = 322 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 102/314 (32%), Gaps = 74/314 (23%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSG------------------- 78 + V R KY I L + + +++H GM+G Sbjct: 1 MRKVLTNAVVTSVGRHGKYFWIRLNNHNTTNVLLMHFGMTGMIKLRNVHSHLAFMENGGD 60 Query: 79 --------SFI-----IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 F I+ K P+ + L NN KK ++DPRR + Sbjct: 61 KKALEKLERFRYKDSRIKPDVEVKQEWPPRFTKFNMELENND--KKLEFAFSDPRRLARV 118 Query: 126 DLV------ETSLKYQYPPLRTLGPE------------PA---DNS--------FNAIYL 156 L+ + PL LGP+ P D + Sbjct: 119 RLLSGLEVSTDESLLKLSPLNALGPDYSKPEVPPKESEPFVFGDPDSDNHGRARLSIDEF 178 Query: 157 THQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDILY 215 + K +K+ LL+Q AG+GN E L++A + P + + ++ ++ Sbjct: 179 SALILSKKKPIKSLLLDQTYFAGVGNWVADEVLFQAHIHPNEIISSKIPKDLEYVHPVIK 238 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L + V +A+ G + + + G+ + N G ++ I Sbjct: 239 QLYDSLIYVCEEAVRVEGDVAKFPDDWLMLHRWGK------GRKEKRKTPN-GYILDHIT 291 Query: 276 QAGRSTFYCTYCQK 289 GR++ YC Q+ Sbjct: 292 VGGRTSCYCPELQR 305 >gi|241956478|ref|XP_002420959.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis CD36] gi|223644302|emb|CAX41115.1| formamidopyrimidine-DNA glycosylase, putative [Candida dubliniensis CD36] Length = 348 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 99/316 (31%), Gaps = 74/316 (23%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGNLS---IIVHLGMSG--SFI------------ 81 + V R KY I L + + +++H GM+G Sbjct: 21 DKMRKNLTNAVVTSVGRHGKYFWIRLHNHNTCNVLLMHFGMTGMVKLRNVQSHLSFMENG 80 Query: 82 ------------------IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 IE + K P+ + L NN KK ++DPRR Sbjct: 81 GDKKVLEMLERFKYKDSKIEPDAEVKQEWPPRFTKFDMELENNE--KKLEFAFSDPRRLA 138 Query: 124 FM------DLVETSLKYQYPPLRTLGPEPADNSFNA-----------------------I 154 + ++ + PL LGP+ + Sbjct: 139 RVRSLSGLEVSADESLLKLSPLNVLGPDYSKPDVPPKELEKFVFGDPDSDNHGRPRLPID 198 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP-IRKTRSLIQNNGTPKDI 213 + K +K+ LL+Q AG+GN E L++A + P + + + + Sbjct: 199 EFSSLVLSKKKPIKSLLLDQAYFAGVGNWVADEVLFQAHIHPNEIISSKIPNDLDYIHPV 258 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L KL + V +A+ G + + + G+ + N G ++ Sbjct: 259 LQKLYDSLIYVCEEAVRVEGDVTKFPDDWLMLHRWGK------GRKEKRKTPN-GLILDH 311 Query: 274 IVQAGRSTFYCTYCQK 289 I GR++ YC QK Sbjct: 312 ITVGGRTSCYCPALQK 327 >gi|198282763|ref|YP_002219084.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667882|ref|YP_002424959.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247284|gb|ACH82877.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520095|gb|ACK80681.1| formamidopyrimidine-DNA glycosylase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 267 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 28/291 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN--LRFDFPHHFSAATRGKKIIDVSRRAK 58 M ELPE+E++R+ L + + V + + D AA +G+ I D+ R + Sbjct: 1 MAELPEIELLRQKLRRNILHKRVGVMQMQNAKGEALPDGAGIKDAALKGRAITDLHRYGQ 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL +EL+ + + LG G E + + + + N R+ + Sbjct: 61 YLFLELDRKDILALQLG--GELSGELERGPVHGEGGEEPRAALEIQINGQQ---RLRFQG 115 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY-LTHQFHKKNSNLKNALLNQKIV 177 + + +++ L LGP+P + L ++ S L+N LL+ Sbjct: 116 TQLGNRLRMLD--ENSDVDFLTKLGPDPLMVHGEGLGILREALSRRRSALRNILLDDTFA 173 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 GIG I+ E L++A+L P R SL + + + + + Sbjct: 174 PGIGGIWADEILFQARLRPDRTATSLSEEERERFLEQIPKVLDRAVRCQAKTNLLPKTFL 233 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG +CG + + G++ C CQ Sbjct: 234 TRHREDGH------------------CPSCGGALETLSVGGKNAMLCPACQ 266 >gi|319935125|ref|ZP_08009565.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] gi|319809950|gb|EFW06333.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. 29_1] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 105/296 (35%), Gaps = 30/296 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M ELPE + L + + + L +F + A G I Sbjct: 1 MIELPEALSRAKELNNALIGKKIVKVLLPTSPHKFCWFQGDVASYPAQLEGHMIKGARGF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ IE + + + V+ G + T + P+ + I + T+ +Y Sbjct: 61 GIFVEIECDQGVYMCVNDG------VNMTVFTACDEIPEKYQLAILFEDQTSLVFQVAMY 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 +Y L + P + F Y K ++K L + Sbjct: 115 ----GSLICHHGNYENEYYLKSLEKISP--ISSQFTYHYFVSVLENVKPTMSIKAFLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + GIGN + + LW A L P RK SL + +L Q IQ +L + I+ GG Sbjct: 169 QRFPGIGNGVLQDILWEASLHPKRKVNSLSKQESQ------QLFQAIQSILGEMIEQGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKT-GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +I G G ++ S KT +PC C I + G + ++C CQK Sbjct: 223 DTE--KNIFGYFGGYRTRLS--KKTLHQPC-PRCQTPIEKANYLGGTIYFCPQCQK 273 >gi|289568914|ref|ZP_06449141.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|289542668|gb|EFD46316.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 158 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 5 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 62 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ VY Sbjct: 63 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVY 111 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 112 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|319948434|ref|ZP_08022571.1| formamidopyrimidine-DNA glycolase [Dietzia cinnamea P4] gi|319437893|gb|EFV92876.1| formamidopyrimidine-DNA glycolase [Dietzia cinnamea P4] Length = 269 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 86/275 (31%), Gaps = 51/275 (18%) Query: 37 FPHHFSAATRGKKIIDVSRRAKYLLIELE------GNLSIIVHLGMSGSFIIEHTSCAKP 90 P + RG+ + R K+LL+ + +++ +HL M G + + Sbjct: 8 VPRFAAVDLRGRTVEAARSRGKHLLVVVGPDGQGRDPVTLHIHLKMEGRIHVLR--AGER 65 Query: 91 IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNS 150 + P H V + L L + + LGP+ D Sbjct: 66 WRFPAHT-VRLVLRAGDTEVV---------GTELGLLRALTPAEADGAVEHLGPDLLDAD 115 Query: 151 FN-----AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ++ A + + + ALL+Q+ +AGIG IY E + + P + Sbjct: 116 WDPVASTAEAVRRIRERPGRTIGEALLDQRNLAGIGTIYRAELCFLRGVDPRDPV-EVGP 174 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 + G + K++ + V + VYG+ G PC Sbjct: 175 DLGATVTLARKMLVANANRV--------------VRVTTGETRRGRELWVYGRDGRPC-R 219 Query: 266 NCGQMIRRIVQAG------------RSTFYCTYCQ 288 CG + G R + C CQ Sbjct: 220 RCGTRVETFRLGGLADPHEPSDSPDRIAYRCPSCQ 254 >gi|219556809|ref|ZP_03535885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 160 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ VY Sbjct: 65 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVY 113 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 114 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|325923755|ref|ZP_08185372.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] gi|325545753|gb|EGD16990.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] Length = 111 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 7/118 (5%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++Q +V G+GNIY E+L RA LSP+R+ + D +L ++ +L AI Sbjct: 1 MDQAVVVGVGNIYAAESLHRAGLSPLREAGKVS------LDRYRRLATAVKDILGYAIQR 54 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GG++LRD++ DG+ GYF+ +VYG+ G+ C CG++++ R+T +C CQ+ Sbjct: 55 GGTTLRDFISPDGAPGYFEQELTVYGREGKAC-KQCGRVLKHATIGQRATVWCGSCQR 111 >gi|225629725|ref|ZP_03787686.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591420|gb|EEH12499.1| formamidopyrimidine-DNA glycosylase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 117 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 9/123 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE+I L+ +KN ++++ ++ NLR + +GK I ++ RR KY Sbjct: 1 MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT 60 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + +G++++I+HLGMSG I + +H+HV ++NT+ +I+NDPR Sbjct: 61 IWNTDGSVAVIIHLGMSGKLIYADHDQMRN----KHDHVVFLFSDNTS-----IIFNDPR 111 Query: 121 RFG 123 RFG Sbjct: 112 RFG 114 >gi|15840367|ref|NP_335404.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|148822152|ref|YP_001286906.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253800030|ref|YP_003033031.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|254231252|ref|ZP_04924579.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|308231675|ref|ZP_07413410.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308370120|ref|ZP_07420350.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308372976|ref|ZP_07430625.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308379911|ref|ZP_07488077.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|13880533|gb|AAK45218.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|124600311|gb|EAY59321.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|148720679|gb|ABR05304.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253321533|gb|ACT26136.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|308216422|gb|EFO75821.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308325248|gb|EFP14099.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308339239|gb|EFP28090.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308363225|gb|EFP52076.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] Length = 166 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 13 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 71 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 119 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 120 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|300858055|ref|YP_003783038.1| hypothetical protein cpfrc_00637 [Corynebacterium pseudotuberculosis FRC41] gi|300685509|gb|ADK28431.1| hypothetical protein cpfrc_00637 [Corynebacterium pseudotuberculosis FRC41] gi|302205777|gb|ADL10119.1| Putative endonuclease VIII [Corynebacterium pseudotuberculosis C231] Length = 257 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 93/282 (32%), Gaps = 42/282 (14%) Query: 18 MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS 77 M+ V + P A G+ + V K L +++ G + HL M Sbjct: 1 MEGRKVLGTSIR-------VPQLALATFTGRTVKRVWPYGKNLFMQI-GEDILHTHLKME 52 Query: 78 GSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 G++ + P H L + T K+ + F + Sbjct: 53 GAWAVYRKG--DRWSKPAHTARVQLLLDGTPQKRSIEVVGFSLGFVRI----FPACDYPG 106 Query: 138 PLRTLGPEPADNSFN----AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + LGP+ S+ + + + A+L+Q+ +AG+GN Y E + Sbjct: 107 AIAHLGPDVLGQSWENTGHSEARRRILLDPDRAIGLAILDQRNLAGVGNEYRAEICFLCG 166 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P + R + D+ L+ + + + + V + I Sbjct: 167 VHPATRVRDV--------DVDRILLITRRLMWANRL--------STVRVTTGIKRLGETT 210 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAG-------RSTFYCTYCQ 288 V+G+ +PC CG I + R ++C +CQ Sbjct: 211 YVFGRNHKPC-RRCGTRILQSTLVDDPSSELERIIWWCPHCQ 251 >gi|298524435|ref|ZP_07011844.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|298494229|gb|EFI29523.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 166 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 13 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 71 FATAGKLSGAQLT--CLHEAIASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 119 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 120 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|213028695|ref|ZP_03343142.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 162 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 16/167 (9%) Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGN 182 +++ +P L+ +GP+ D + + +N LL+Q +AG+GN Sbjct: 9 EMLTAEQLMTHPFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGN 68 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 E LW+ L+ K + L N + + L+ I + R Sbjct: 69 YLRVEILWQVGLTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTRGQADE 117 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G F V+ + GE C CG +I + + R ++C +CQK Sbjct: 118 NKHHGAL-FRFKVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 162 >gi|15608084|ref|NP_215459.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|31792133|ref|NP_854626.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121636869|ref|YP_977092.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660723|ref|YP_001282246.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224989340|ref|YP_002644027.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|260185844|ref|ZP_05763318.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260199964|ref|ZP_05767455.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260204150|ref|ZP_05771641.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289442359|ref|ZP_06432103.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289446514|ref|ZP_06436258.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289573573|ref|ZP_06453800.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289749468|ref|ZP_06508846.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289753000|ref|ZP_06512378.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289757029|ref|ZP_06516407.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|289761078|ref|ZP_06520456.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|294996428|ref|ZP_06802119.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] gi|297633465|ref|ZP_06951245.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297730450|ref|ZP_06959568.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313657778|ref|ZP_07814658.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|1524218|emb|CAB01977.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|31617721|emb|CAD93830.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121492516|emb|CAL70984.1| Possible formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504875|gb|ABQ72684.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224772453|dbj|BAH25259.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415278|gb|EFD12518.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289419472|gb|EFD16673.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289538004|gb|EFD42582.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289690055|gb|EFD57484.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289693587|gb|EFD61016.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289708584|gb|EFD72600.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|289712593|gb|EFD76605.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|323720655|gb|EGB29733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904835|gb|EGE51768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 158 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 5 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 62 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 63 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 111 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 112 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 142 >gi|167967805|ref|ZP_02550082.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215426213|ref|ZP_03424132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215429803|ref|ZP_03427722.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215445090|ref|ZP_03431842.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218752609|ref|ZP_03531405.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|254363871|ref|ZP_04979917.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254549924|ref|ZP_05140371.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289555276|ref|ZP_06444486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308370542|ref|ZP_07421943.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308371805|ref|ZP_07426308.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308374140|ref|ZP_07435023.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308375296|ref|ZP_07443456.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308376555|ref|ZP_07439277.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308377554|ref|ZP_07479648.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308378766|ref|ZP_07483841.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308397511|ref|ZP_07492578.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|134149385|gb|EBA41430.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|289439908|gb|EFD22401.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308331620|gb|EFP20471.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308335433|gb|EFP24284.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308342884|gb|EFP31735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308346800|gb|EFP35651.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308350716|gb|EFP39567.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308355377|gb|EFP44228.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308359316|gb|EFP48167.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308366882|gb|EFP55733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|328459772|gb|AEB05195.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 160 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 65 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 113 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 114 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|29347769|ref|NP_811272.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29339670|gb|AAO77466.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 273 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 34/298 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDI----CLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M ELPE + + + + +K+ +T++ H+ F P +S G++I Sbjct: 1 MKELPENQTLSKQINETLKDRVITEVFNATKFHKNTFYFGDPLTYSELLIGRRINSSMSF 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ I L+ I G + + K P + + ++L NNT ++ Sbjct: 61 GMYVDIILDKETKISFGDGTNLKY------GTISNKMPNNYQLLLALDNNTYLTFTVGMF 114 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQ 174 + + + Y L L P + FN Y K S++K L + Sbjct: 115 GVIAAYTGIY----NDIYYKKNLDNLSP--LSDDFNEQYFEKLCVGVKPKSSVKVLLATE 168 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 + + G+GN + + L+ AK++P R+ SL + + L+Q I+ L + I GG Sbjct: 169 QRIPGLGNGVLQDILFNAKINPKREINSLTDIDKS------ALLQSIKMTLKNMILQGGR 222 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTG---EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + I G+ G ++ S +PC CG I + +G +YC YCQK Sbjct: 223 DTE--MDIFGNHGNYKTILS----KNTLSKPC-PQCGNPIIKETSSGGVVYYCPYCQK 273 >gi|239917495|ref|YP_002957053.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] gi|239838702|gb|ACS30499.1| formamidopyrimidine-DNA glycosylase [Micrococcus luteus NCTC 2665] Length = 241 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 36/247 (14%) Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF------- 122 + VHLGM G++ + + + D + Sbjct: 2 LHVHLGMYGAWTFGGDQDFAAASSIGAPRRIGEREVHDDGAPAAEPCRDADGWVQPPSPA 61 Query: 123 -----------GFMDLV------ETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS 165 G+ DL+ + + LGP+P ++ + + Sbjct: 62 ATVRLRLRAEHGWADLIGASRCRALTPAEAADVVAGLGPDPLNDD-DPAPFYDLARRTRR 120 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 + L++Q V+GIGNI+ EAL+RA + P R R + + L L + ++ Sbjct: 121 PIGVVLMDQAAVSGIGNIFRAEALFRAGIDPWRPAREVSAPD------LESLWADNAALM 174 Query: 226 IDAIDAGGSSLRDYVHIDG---SIGYFQNAFSVYGKTGEPCLSNCG-QMIRRIVQAGRST 281 + + G H G + ++A VY + G CL CG + I A R Sbjct: 175 REGVRLGRIVTTRPEHRPGIPAEAAWPEHANYVYQRQGLACL-VCGREAIVVEEMAARKL 233 Query: 282 FYCTYCQ 288 + C CQ Sbjct: 234 YRCLTCQ 240 >gi|215410531|ref|ZP_03419339.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 160 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN Y E L AK+SP Sbjct: 7 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 65 FATAGKLSGAQLT--CLHEAIASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 113 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 114 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|289810522|ref|ZP_06541151.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 103 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 6/109 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNT 109 L+EL II+HLGMSGS I ++ + +H+HV + ++N Sbjct: 60 LLELPDG-WIIIHLGMSGSLRI----LSEALPAEKHDHVDLVMSNGKIL 103 >gi|289744675|ref|ZP_06504053.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] gi|289685203|gb|EFD52691.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] Length = 166 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN + E L AK+SP Sbjct: 13 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAHSDEILHVAKISP 70 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 71 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 119 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 120 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 150 >gi|320534790|ref|ZP_08035210.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320132993|gb|EFW25521.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 138 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 10/142 (7%) Query: 150 SFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 + + + ++ L++Q ++AG GNIY E L+R +SP R + + Sbjct: 2 DADVEAFVAKARSRRKSIGELLMDQAVIAGAGNIYRAETLFRVGISPFRAGNRISE---- 57 Query: 210 PKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI---GYFQNAFSVYGKTGEPCLSN 266 + L + ++++ ++ + G + D + + + VY +TG PCL Sbjct: 58 --ERLRAIWEDLRPLMEYGVATGFITTVDLDDVPAPLPPDDPEAGRWYVYHRTGRPCL-R 114 Query: 267 CGQMIRRIVQAGRSTFYCTYCQ 288 CG + A R F+C CQ Sbjct: 115 CGTPVAEREVASRRLFWCPTCQ 136 >gi|215402744|ref|ZP_03414925.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] Length = 160 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 P R LGP+ D S + L +K + +QK++AGIGN + E L AK+SP Sbjct: 7 PQPRALGPDALDVSTDD--LAGLLAGNTGRIKTVITDQKVIAGIGNAHSDEILHVAKISP 64 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L T + + + + ++ G + L+ G ++ V+ Sbjct: 65 FATAGKLSGAQLT--CLHEAMASVLSDAVRRSVGQGAAMLK---------GEKRSGLRVH 113 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 +TG PC CG +R + A +S YC CQ Sbjct: 114 ARTGLPC-PVCGDTVREVSFADKSFQYCPTCQ 144 >gi|254574788|pdb|3A45|A Chain A, Crystal Structure Of Mvnei1_2 gi|254574789|pdb|3A45|B Chain B, Crystal Structure Of Mvnei1_2 gi|254574790|pdb|3A46|A Chain A, Crystal Structure Of Mvnei1THF COMPLEX gi|254574791|pdb|3A46|B Chain B, Crystal Structure Of Mvnei1THF COMPLEX Length = 289 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 111/314 (35%), Gaps = 52/314 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPE PEV + L K T+ I P F A K+ +V + Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLP-LKVSNVDTKG 59 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L EL I G++G + + ++ +S N + Sbjct: 60 KFLWFELFDPNDKSNKWYIWNTFGLTGMWSLFEA---------KYTRAVLSFDN-----E 105 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNA 170 ++D R FG + + + L LGP+ ++ + + K + Sbjct: 106 LMAYFSDMRNFGTFKFSNSEKELKRK-LNELGPDFLKNDDID----ISKIKKYKQPIVAL 160 Query: 171 LLNQKIV-AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L++QK + +G+GN V E L+RAK+ P + +L + L+ I+ K+ D+ Sbjct: 161 LMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQEI---ENLWYWIKYETKLAYDSN 217 Query: 230 DAG---------GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-- 278 G R H + + F VY K +P G + G Sbjct: 218 HIGYMVNLENESSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSG 273 Query: 279 ---RSTFYCTYCQK 289 R+T++ QK Sbjct: 274 KNKRTTYWAPAIQK 287 >gi|254574787|pdb|3A42|A Chain A, Crystal Structure Of Mvnei1 Length = 295 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 111/314 (35%), Gaps = 52/314 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPE PEV + L K T+ I P F A K+ +V + Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLP-LKVSNVDTKG 59 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L EL I G++G + + ++ +S N + Sbjct: 60 KFLWFELFDPNDKSNKWYIWNTFGLTGMWSLFEA---------KYTRAVLSFDN-----E 105 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNA 170 ++D R FG + + + L LGP+ ++ + + K + Sbjct: 106 LMAYFSDMRNFGTFKFSNSEKELKRK-LNELGPDFLKNDDID----ISKIKKYKQPIVAL 160 Query: 171 LLNQKIV-AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L++QK + +G+GN V E L+RAK+ P + +L + L+ I+ K+ D+ Sbjct: 161 LMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQEI---ENLWYWIKYETKLAYDSN 217 Query: 230 DAG---------GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-- 278 G R H + + F VY K +P G + G Sbjct: 218 HIGYMVNLENESSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSG 273 Query: 279 ---RSTFYCTYCQK 289 R+T++ QK Sbjct: 274 KNKRTTYWAPAIQK 287 >gi|311977698|ref|YP_003986818.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|76363876|sp|Q5UQ00|FPG_MIMIV RecName: Full=Probable formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; Short=AP lyase gi|55416935|gb|AAV50585.1| formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|308204334|gb|ADO18135.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] Length = 287 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 111/314 (35%), Gaps = 52/314 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRA 57 MPE PEV + L K T+ I P F A K+ +V + Sbjct: 1 MPEGPEVALTADILEKYFKGKTLEYIDFISGRYSKSEPEGYDDFIANLP-LKVSNVDTKG 59 Query: 58 KYLLIEL------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K+L EL I G++G + + ++ +S N + Sbjct: 60 KFLWFELFDPNDKSNKWYIWNTFGLTGMWSLFEA---------KYTRAVLSFDN-----E 105 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA-DNSFNAIYLTHQFHKKNSNLKNA 170 ++D R FG + + + L LGP+ ++ + + K + Sbjct: 106 LMAYFSDMRNFGTFKFSNSEKELKRK-LNELGPDFLKNDDID----ISKIKKYKQPIVAL 160 Query: 171 LLNQKIV-AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAI 229 L++QK + +G+GN V E L+RAK+ P + +L + L+ I+ K+ D+ Sbjct: 161 LMDQKKIGSGLGNYLVAEILYRAKIDPHKLGSNLTDQEI---ENLWYWIKYETKLAYDSN 217 Query: 230 DAG---------GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-- 278 G R H + + F VY K +P G + G Sbjct: 218 HIGYMVNLENESSKIGRKNYHPNIHPTEKEFDFLVYRKKKDP----NGNKVIADKIIGSG 273 Query: 279 ---RSTFYCTYCQK 289 R+T++ QK Sbjct: 274 KNKRTTYWAPAIQK 287 >gi|269119716|ref|YP_003307893.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] gi|268613594|gb|ACZ07962.1| Formamidopyrimidine-DNA glycosylase-like protein [Sebaldella termitidis ATCC 33386] Length = 277 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 114/297 (38%), Gaps = 33/297 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF-----PHHFSAATRGKKIIDVSR 55 M E+PE + + L +KN + ++ + +F F P +++A GKKI + Sbjct: 1 MLEIPESFNLAKQLNQTVKNKVIKNVKAAQSPHKFAFYFNDDPDNYNALLSGKKIEKIEP 60 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + I E N+ I+ G + K P+ + + + +N+ + Sbjct: 61 IGGQVEITAE-NIRILFGDG------VNARYLPAGEKIPEKHQLLMEFDDNSCIVCTVQM 113 Query: 116 YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLN 173 Y Y + P P F+ Y K ++K L Sbjct: 114 YG-----VLHAFTHGENDNFYYHVAKTKPSPLSKDFDISYFEKIISDTKPTLSVKALLAT 168 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G GN + + L+ + ++P K + L ++ + +L Q I+++L+ + GG Sbjct: 169 EQRIPGFGNGILQDILFISGINPKTKIKFLDSSD------IDRLFQNIKEILLKMAENGG 222 Query: 234 SSLRDYVHIDGSIGYFQNAFSV--YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + G+ G ++ S Y EPC CG I + G + ++C CQ Sbjct: 223 RDTE--KDLFGNYGNYKTVLSAKTYK---EPC-PVCGTAITKQAYLGGNIYFCPVCQ 273 >gi|5020105|gb|AAD38025.1|AF148219_3 formamidopyrimidine-DNA glycosylase MutM [Nostoc sp. PCC 8009] Length = 163 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 62/172 (36%), Gaps = 30/172 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE +RR L + N +T D+ L R F G I + RR K Sbjct: 1 MPELPEVETVRRGLNQLTLNQEITGGDVLLERTIAYPFSVGEFINGVEGYAIANWHRRGK 60 Query: 59 YLLIELEGNL-----------------SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 YL+ EL + + VHL M+G + P H H + Sbjct: 61 YLVAELSQSPQQEDAGSKNFSASPATSWLGVHLRMTGQLLWLDRD------EPLHKHTRV 114 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSF 151 L + + + D R FG M V + + L L +P F Sbjct: 115 RLFFGD---RQELRFVDQRTFGKMWWVPPGVAVESIITGLAKLAADPFSPEF 163 >gi|291009150|ref|ZP_06567123.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 17/205 (8%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R + K + + RF +A G + K+L Sbjct: 1 MPEGHTLHRLAQLHQKRYGGAAVRVGSPQGRFAAS---AALLDGSVLRRAEAHGKHLFHF 57 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + VHLG+ G+F +P V + + +T+ D R Sbjct: 58 HGPDRVVHVHLGLYGTFTESELPMDEPR-----GQVRMRIVGDTHG-------TDLRGPT 105 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 +L+ + LGP+P + + + +++ LL+QK++AG GN+ Sbjct: 106 ACELLTDAEVEALRD--RLGPDPLRADADPDRAWQRISRSRTSIAALLLDQKVLAGAGNV 163 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNG 208 Y E L+R + P R L + Sbjct: 164 YRAEVLFRHGIPPRTPGRDLGRERW 188 >gi|190574463|ref|YP_001972308.1| putative DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia K279a] gi|190012385|emb|CAQ46013.1| putative DNA-formamidopyrimidine glycosylase [Stenotrophomonas maltophilia K279a] Length = 244 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 102/289 (35%), Gaps = 55/289 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + ++ R K V + + R D +G+++ V K+ Sbjct: 1 MPEGPSI-VLLREAASHFKGHVVRAVSGNS---RVDLSP-----LQGRRVKAVRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + ++ +HL M GS+ I+ P V++ N + Sbjct: 52 LLEFSRH-TLRIHLMMFGSWRIDERKPTPP-------RVSLRFDNGELNFYACSV----- 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 L++ L Y + +++++ + + + +ALL+Q + AG Sbjct: 99 -----RLIDEPLDEVYDWRA----DVMNDAWDPKLARRKLKAMPDVMVCDALLDQTVFAG 149 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R + P + L P L LI + + D + Sbjct: 150 VGNIIKNEVLFRIGVHPATRLGDL------PPRRLTALITQARAYSFDFLQ--------- 194 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTY 286 + + V+ + P CG I ++ R TF+C Sbjct: 195 ---WKRRFELKKHWQVHTRRICP---ACGGPISKLYMGTTRRRTFFCPN 237 >gi|225388501|ref|ZP_03758225.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] gi|225045432|gb|EEG55678.1| hypothetical protein CLOSTASPAR_02237 [Clostridium asparagiforme DSM 15981] Length = 296 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 104/294 (35%), Gaps = 30/294 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVSRR 56 M E PE+ +I R L VT + K +F P + A G +I Sbjct: 21 MLEYPEIAVISRQLQKETAGKMVTAVLPPMKPHKFCWFNGDPAGYEAQLTGSRITAAEGF 80 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++ + + + + G + T KP P + I L + T +Y Sbjct: 81 GIFVELVFDNGRRLCFNDG----VNVRLTGGEKP---PAACQLLIRLDDGTALAFTVAMY 133 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQK 175 G + L + S +Y P +F A Y K L ++ Sbjct: 134 ------GGIYLHDGSYGDEYYVKSRAAEPPLSKAFAARYEKALGEAGPKLTAKAFLATEQ 187 Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSS 235 GIGN + + L+RA + P R+ S+ + L+ + VL + AGG Sbjct: 188 RFPGIGNGVLQDILFRANIHPRRRLESMSGDEKAG------LLAAVTSVLGEMETAGGRD 241 Query: 236 LRDYVHIDGSIGYFQNAFSVYG-KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I G G ++ S G K+G P CG I + G S +YC CQ Sbjct: 242 TE--KDIYGQPGGYRTIMSKNGMKSGCP---ACGGPIVKAAYLGGSVYYCPACQ 290 >gi|18762494|gb|AAL78073.1| Fpg [Proteus mirabilis] Length = 108 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 7/106 (6%) Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 IY EAL+ + + P RK SL + L+ I+ VL +I+ GG++L+D++ Sbjct: 4 IYASEALFASGIMPDRKANSLTEQECDV------LVNAIKTVLTRSIEQGGTTLKDFLQS 57 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 DG GYF VYG+ + CL CG I I Q RSTF+C +CQ Sbjct: 58 DGKPGYFAQELFVYGRKDKACL-ICGHTIESIKQGQRSTFFCRHCQ 102 >gi|255010489|ref|ZP_05282615.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313148296|ref|ZP_07810489.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] gi|313137063|gb|EFR54423.1| formamidopyrimidine-DNA glycosylase [Bacteroides fragilis 3_1_12] Length = 279 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 108/295 (36%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE ++ L + +TD+ +F + P + GK I + Sbjct: 1 MIEAPEARLLCEQLNKTVCGKRITDVFAQYTPHKFAWFYGKPEECAERLVGKTIDKACPQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 ++EL +++V ++ + + + + +H + ++ + + +Y Sbjct: 61 GG--MVELTAGDTMLV---LTDGVNLRYFEPGAKLPS-KH-QLLVAFDDESCLLASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY---LTHQFHKKNSNLKNALLN 173 F + Y P+ ++F+ Y L + + + K L Sbjct: 114 GALLCFTRGHF--DAPLAAYYETARTKPQVMSDAFDKEYFLGLVNAPDAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + + L+ A + P K L K+ +++++ L D GG Sbjct: 172 EQTIPGLGNGVLQDILYHAHIHPKTKIDKLGAEEK------EKMYEQVKETLQDIYRLGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S + G G + + S G C CG+ I + G S +YC CQ Sbjct: 226 RSTET--DLFGVPGQYVASLS-KNTAGHAC-PKCGETIVKENYLGGSIYYCRGCQ 276 >gi|163838843|ref|YP_001623248.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] gi|162952319|gb|ABY21834.1| formamidopyrimidine-DNA glycosylase [Renibacterium salmoninarum ATCC 33209] Length = 188 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 79/214 (36%), Gaps = 31/214 (14%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M GS+ S + + P + I + + GF+ +V+ Sbjct: 1 MEGSWH--TYSRQETWRRPTYTARVILEAAEAVAVGFSL--------GFVHVVKPDELD- 49 Query: 136 YPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 L LGP+ +N + ++ + + ALL+Q+ +AGIGNIY E + Sbjct: 50 ---LDYLGPDLLGPDWNPLEARNRLSAQLGRPIGLALLDQRNLAGIGNIYRNELCFLIGA 106 Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 P+ + ++ +L++ + R G NA Sbjct: 107 HPLSAVEKVDLGRVV--ELAKRLLEANKN-------------RKQRSTTGGPARADNASW 151 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 VYG+ +PC CG +IR GR ++C CQ Sbjct: 152 VYGRARQPC-RRCGSLIREDELEGRVIYFCPRCQ 184 >gi|220936333|ref|YP_002515232.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Thioalkalivibrio sp. HL-EbGR7] gi|219997643|gb|ACL74245.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII [Thioalkalivibrio sp. HL-EbGR7] Length = 270 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 100/297 (33%), Gaps = 41/297 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE + + + L ++ + L R P ++ V+ K+L Sbjct: 1 MPEGDTLHKLAKALQPRLQGQAIRLTRLRGVPPRTPLPEG--------RVESVTAEGKHL 52 Query: 61 LIELEGNL----SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 LI G + HLG+ G + + +P + P + ++ + Sbjct: 53 LIRFTGEEGGAQVLRTHLGLWGGWH--QYAPGEPWRKPARQAWVVLQADDAVFVCFNARE 110 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH---KKNSNLKNALLN 173 +++ + LGP+ + L + + L + LL+ Sbjct: 111 V--------EVMSAGGVRRRGLTARLGPDLLGADVDLAALPARAREILPGEAPLVDVLLD 162 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 Q++ +GIGN+Y E L+ L+P+ ++ L + +L + G Sbjct: 163 QRVASGIGNVYKSELLFLLGLAPLTPLEAVSDETLVAAYALAR------DLLSRNLGYGP 216 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 + R G VYG+ CL C IR R T++C CQ Sbjct: 217 RTTRFEADGHG-------RLWVYGRRDVHCLK-CASAIRYARLGRDQRGTYWCPNCQ 265 >gi|329295930|ref|ZP_08253266.1| endonuclease VIII [Plautia stali symbiont] Length = 156 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 17/166 (10%) Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGN 182 +L+ +P L+ +GP+ D + + + + LL+Q +AG+GN Sbjct: 4 ELLNADTLGAHPFLQRVGPDVLDATLTVDKVRERLLSPRFRRRQFSGLLLDQAFLAGLGN 63 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 E LW A L + L L L + V + GS + + Sbjct: 64 YLRVEILWHAGLLAQHCAQDLSDQQ------LDALSHAMLAVPRLSYQMRGSMKKYHEEA 117 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F V+ + G+ C CG +I + V + R ++C CQ Sbjct: 118 -------AFRFEVFHRKGKKC-RRCGTVIEKGVLSSRPFYWCPGCQ 155 >gi|325068497|ref|ZP_08127170.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Actinomyces oris K20] Length = 156 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 11/152 (7%) Query: 141 TLGPEPADNSFN---AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 + + D + + + +K LL+Q +V+GIGNIY E LW A + + Sbjct: 5 HIARDLLDPALQLAGPTGVVARVRASRRAIKTQLLDQGLVSGIGNIYADEGLWEAGVHGL 64 Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD-YVHIDGSIGYFQNAFSVY 256 R L ++ ++++ +V+ A++ GG+S YV ++G+ G+F Y Sbjct: 65 RPGTGLGPR------VVARILESTAEVMRRALEVGGTSFDALYVDVEGAAGFFARELGAY 118 Query: 257 GKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G+ G C CG + R GRS YC CQ Sbjct: 119 GRHGLEC-RRCGATMAREALGGRSHTYCPRCQ 149 >gi|213584692|ref|ZP_03366518.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 143 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 16/156 (10%) Query: 137 PPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 P L+ +GP+ D + + +N LL+Q +AG+GN E LW+ Sbjct: 1 PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQSFLAGLGNYLRVEILWQVG 60 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 L+ K + L N + + L+ I + R + G F Sbjct: 61 LTGQHKAKDL--NEAQLNALSHALLD---------IPRLSYTTRGQADENKHHGAL-FRF 108 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V+ + GE C CG +I + + R ++C +CQK Sbjct: 109 KVFHRDGEAC-ERCGGIIEKTTLSSRPFYWCAHCQK 143 >gi|153809576|ref|ZP_01962244.1| hypothetical protein BACCAC_03894 [Bacteroides caccae ATCC 43185] gi|149127779|gb|EDM19003.1| hypothetical protein BACCAC_03894 [Bacteroides caccae ATCC 43185] Length = 281 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 103/295 (34%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE I+ R L ++ +TD+ +F + ++ GK I + Sbjct: 1 MIEAPEARILCRQLNETVRGKKITDVYTQFSPHKFAWFTGSSEEYAEQLSGKTIDHAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I + G+ +I+ G + A K P + + I+ + + +Y Sbjct: 61 GGMVEITI-GDKVLILTDG------VNLRYLAPGSKLPAKHQLLIAFEDESCLVASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLN 173 + + Y P+ + F+ Y + + K L Sbjct: 114 GGLMCYDKD--AADGVLSNYYLTARSKPQVMSDGFSPEYFLGLINADSAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + + L+ + P +K L L +I++ + D GG Sbjct: 172 EQTIPGLGNGVLQDILYHTHIHPKKKISGLTDKER------ENLFYQIKETMNDIYHLGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 S + G+ G + S G C CG+ I + G S +YC CQ Sbjct: 226 RSTES--DLFGANGKYVACLS-KDTAGMAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|302876909|ref|YP_003845542.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] gi|307687597|ref|ZP_07630043.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Clostridium cellulovorans 743B] gi|302579766|gb|ADL53778.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Clostridium cellulovorans 743B] Length = 276 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 121/299 (40%), Gaps = 34/299 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E+PE ++ + V++N + + + +F + P+ ++ K I + Sbjct: 1 MLEIPESSVLSTQISEVLRNKKIIGVISNHSPHKFAWFHGDPNEYNKILVDKTIHKATPY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I++E ++ + G+S + + P+H + + ++++ +Y Sbjct: 61 GGMIEIKVESSILLFA-DGVSLKY-----NAPNEKLPPKH-QLLLKFEDSSSVTASVQMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN---LKNALLN 173 + + K Y + P P + F+ Y + + K+ L Sbjct: 114 GGI----WCFNENSDFKNPYYDIAKDKPSPLCDEFDKNYFFKLINSPDIQKLSTKSFLAT 169 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ + G+GN + + LW++KL P RK SL + L I+KVL++ ++ G Sbjct: 170 EQRIPGLGNGVLQDILWQSKLHPKRKINSLATGDK------ELLFINIKKVLLEMVELNG 223 Query: 234 SSLRDYVHIDGSIGYFQNAFS---VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G ++ S V G C +C ++I + G S ++C CQK Sbjct: 224 RDTE--KDLFGNNGGYKTRMSKNTV----GSSC-PSCDEIIEKANYLGGSIYFCPNCQK 275 >gi|167756382|ref|ZP_02428509.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] gi|167703790|gb|EDS18369.1| hypothetical protein CLORAM_01915 [Clostridium ramosum DSM 1402] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 116/300 (38%), Gaps = 38/300 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 1 MIELPEAYAIADDLEKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVTISLTNNTNTKKYR 113 Y+ I +E + + + P + + + I+ + + Sbjct: 61 NYYVEIVIENY-----------RLTFRDGANIRYYQKPTKLKKSKLLITFADQSFINVTT 109 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNAL 171 +Y F + ++ +Y L ++GP D F Y + +K L Sbjct: 110 SMYCFIGLF--DQITGSNNEYYQTELTSIGP--LDQEFTLNYFKTLITDETEKLSIKAFL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ + GIGN + ++ AKL P R+ ++L + + + L + + L ++ Sbjct: 166 ATKQRILGIGNGVAQDIMFNAKLFPKRRIKTLNEQD------IKNLYDALIRTLTKMVEN 219 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSV--YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G I G+ G ++ Y K+G P C I++ G S +YC CQK Sbjct: 220 HGR--DSEKDIYGNPGGYKTILCAKSY-KSGCP---ICHCEIKKEQYLGGSIYYCPNCQK 273 >gi|152967340|ref|YP_001363124.1| formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] gi|151361857|gb|ABS04860.1| Formamidopyrimidine-DNA glycolase [Kineococcus radiotolerans SRS30216] Length = 247 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 100/287 (34%), Gaps = 41/287 (14%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE + R+ + + + RFD G +++DV K+LL Sbjct: 1 MPEAHSLHRHARDQRAALAGQVLSVSSPQGRFDATPF-----DGHRLVDVQAHGKHLLYS 55 Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + VHLGM G F+ P + L T P R Sbjct: 56 FEQAPDVHVHLGMKGIFLRTEDLSLPPRAG-----TRMRLAGETT----AFSLIAPSRCE 106 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALLNQKIVAGIGN 182 +D + L +LGP+P A + + A+L+Q + AGIGN Sbjct: 107 ALDAAARAEL-----LASLGPDPLREGAAAREEAARRLGTARGAVGAAVLDQSVWAGIGN 161 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 + E L+ A + P R+ + ++ L E+ + +DA G + D Sbjct: 162 AWRAELLFLAGIDPGRRV------DEAEAGRVWDLAVELLPLGVDA----GQVVSDPTAP 211 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 D VY + E C CG + GR+ + C Q+ Sbjct: 212 DER--------WVYKR--ETC-RRCGSPVGTRTVGGRTAYTCPVDQR 247 >gi|269955906|ref|YP_003325695.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269304587|gb|ACZ30137.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 398 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 89/289 (30%), Gaps = 66/289 (22%) Query: 63 ELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT--------------- 107 + L + VHLG+ G++ + + T T Sbjct: 112 DTADVLWLRVHLGLYGAWTFTTDGTSTAAHAIGAPRRRVGETETTPADLSDPRRSPGLPG 171 Query: 108 --------------NTKKYRVI----YNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN 149 + R++ D +++ + K + LGP+P Sbjct: 172 SDNSVGEWVVPPPRGAVRARLLGAHAVADLTGPTACEVITPADKVAVE--QRLGPDPIRP 229 Query: 150 SFN-------AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS 202 + + + L+ Q +VAG+GNI+ EAL+RA L P+R R Sbjct: 230 DGGHGSLAKARDVFVTRVCRSRVTVGQQLMEQSVVAGVGNIFRAEALFRAGLDPLRPGRD 289 Query: 203 LIQN--NGTPKDILYKLIQEIQKVLIDAIDAG-------------------GSSLRDYVH 241 + D++ + +++ I ++ R Sbjct: 290 VDPAVLGAIWDDLVDLMHDGVRRGAIVTTRPADRGHDAPGIRAAGGAAALGATTRRHERR 349 Query: 242 IDGSIGYFQNA--FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G F VY + G PC CG + AGR+ ++C CQ Sbjct: 350 APVPPGAVPREESFYVYQRDGLPC-RLCGAPVLVKDLAGRALYWCPVCQ 397 Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 6/64 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V + R + + + RF +A G+ ++ K L Sbjct: 1 MPEGHTVHRLARTFAELFGGQALA---VTSPQGRF---AAGAALVSGRVLVASEAWGKQL 54 Query: 61 LIEL 64 + Sbjct: 55 FLGF 58 >gi|237733045|ref|ZP_04563526.1| formamidopyrimidine-DNA glycosylase [Mollicutes bacterium D7] gi|229383847|gb|EEO33938.1| formamidopyrimidine-DNA glycosylase [Coprobacillus sp. D7] Length = 277 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 116/300 (38%), Gaps = 38/300 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPE I +L + T+ D+ + + +F F P+ + GKK+ + +R Sbjct: 5 MIELPEAYAIADDLKKEILGKTIIDLGGNYTDHKFTFYEGNPNSYKELLVGKKVTGIIKR 64 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP---QHNHVTISLTNNTNTKKYR 113 Y+ I +E + + + P + + + I+ + + Sbjct: 65 NYYVEIVIENY-----------RLTFRDGANIRYYQKPTKLKKSKLLITFADQSFINVTT 113 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSN--LKNAL 171 +Y F + ++ +Y L ++GP D F Y + +K L Sbjct: 114 SMYCFIGLF--DQITGSNNEYYQTELTSIGP--LDQEFTLNYFKTLITDETEKLSIKAFL 169 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 ++ + GIGN + ++ AKL P R+ ++L + + + L + + L ++ Sbjct: 170 ATKQRILGIGNGVAQDIMFNAKLFPKRRIKTLNEQD------IKNLYDALIRTLTKMVEN 223 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSV--YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G I G+ G ++ Y K+G P C I++ G S +YC CQK Sbjct: 224 HGR--DSEKDIYGNPGGYKTILCAKSY-KSGCP---ICHCEIKKEQYLGGSIYYCPNCQK 277 >gi|325066953|ref|ZP_08125626.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Actinomyces oris K20] Length = 139 Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + + + ++ L++Q +++G GNIY E L+R +SP R Sbjct: 1 RADGDVEAFVAKARSRRKSIGELLMDQAVISGAGNIYRAETLFRVGVSPFRAGNR----- 55 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF---QNAFSVYGKTGEPCL 264 T ++ L + ++++ ++ + G + D + + + VY +TG PCL Sbjct: 56 -TSEERLRAIWEDLRPLMEYGVATGFITTVDLDDVPDPLPPDDPEAGRWYVYHRTGRPCL 114 Query: 265 SNCGQMIRRIVQAGRSTFYCTYCQ 288 CG + A R F+C CQ Sbjct: 115 -RCGTPVAEREVASRRLFWCPTCQ 137 >gi|167746192|ref|ZP_02418319.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] gi|167654185|gb|EDR98314.1| hypothetical protein ANACAC_00894 [Anaerostipes caccae DSM 14662] Length = 273 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 105/298 (35%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVS 54 M ELPE + R L +K + +F + G+K++D Sbjct: 1 MIELPE--ALARADELKSELKGKRAEKVWPPSSPHKFCWFNGEASSYDDMLSGRKVVDAQ 58 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + I EG+L + + G + + P + I ++ T Sbjct: 59 GFGIFAEIIFEGDLRVCFNDG------VNVRIFGEGDNIPGKYQLRIDFSDGTVLVFTVA 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--HKKNSNLKNALL 172 +Y G + + S +Y + P F+ Y K N + K L Sbjct: 113 MY------GSIACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAKPNLSAKAFLA 166 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 ++ + G+GN + + L+ A + P +K S ++ L I++VL + + Sbjct: 167 TKQRIPGLGNGVLQDILFEAGIHPKKKIGSFTEHEK------ELLFVSIKEVLSEMVRLR 220 Query: 233 GSSLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + G+ G ++ + Y K G P CG I + G + ++C CQ Sbjct: 221 GRDTE--KDLWGNPGGYKTKLSKNTY-KDGCP---KCGGEITKAAYLGGTVYFCPECQ 272 >gi|29349896|ref|NP_813399.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] gi|29341807|gb|AAO79593.1| formamidopyrimidine-DNA glycosylase [Bacteroides thetaiotaomicron VPI-5482] Length = 279 Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 105/295 (35%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE + L + ++D+ + +F + F+ K+I + Sbjct: 1 MIEAPEARYLCEQLTETVVGKRISDVFIQFSPHKFAWFNGNSDEFAEWLVDKRINSAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I +E + +++ G + K P + + I+ + + +Y Sbjct: 61 GGMVEITIE-DKVLVLTDG------VNLRYLTPGTKLPAKHQLLIAFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLN 173 + T + +Y P+ ++F+ Y + + K L Sbjct: 114 GGLMCYDKN--AATGMLSEYYRTAKSKPQVMSDAFSKEYFLGLINDESAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ V G+GN + + L+ A + P +K +L L ++++ + D GG Sbjct: 172 EQTVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYRQGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 226 RNTES--DLFGENGKYTACLS-KDTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|253569736|ref|ZP_04847145.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] gi|251840117|gb|EES68199.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. 1_1_6] Length = 279 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 104/295 (35%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE + L + ++D+ + +F + F+ K+I + Sbjct: 1 MIEAPEARYLCEQLTETVVGKRISDVFIQFSPHKFAWFNGNSDEFAEWLVDKRINSAQSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + I +E + +++ G + K P + + I+ + + +Y Sbjct: 61 GGMVEITIE-DKVLVLTDG------VNLRYLTPGTKLPAKHQLLIAFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLN 173 + + +Y P+ ++F+ Y + + K L Sbjct: 114 GGIMCYSKD--AANGVLSEYYRTAKSKPQVMSDAFSKEYFLGLINDESAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ V G+GN + + L+ A + P +K +L L ++++ + D GG Sbjct: 172 EQTVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYRQGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 226 RNTES--DLFGENGKYTACLS-KDTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|167535061|ref|XP_001749205.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772358|gb|EDQ86011.1| predicted protein [Monosiga brevicollis MX1] Length = 659 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 79/253 (31%), Gaps = 32/253 (12%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEGNL------SIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 + A G+ + + K L + VH GMSG F + A Sbjct: 180 ARAIDGQPLSRIEVHGKNLFYFFGPRPEAANVAIVHVHFGMSGRFAVFDLDKAPEPTAT- 238 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIY 155 + L N + R L++ + R LG +P + Sbjct: 239 ---TRLRLVNEQAGLVAHLSAMTVR------LLDLAGYKAKA--RELGEDPLRSDAQPSV 287 Query: 156 LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 L + ++ L++Q G+GNIY E L+++ + P L + Sbjct: 288 LWPRVKASRKSIGALLMDQ----GVGNIYRAEILFKSGVHPEIPAALLEEEQ------FE 337 Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 + + +L + G D +G + +Y + C +R + Sbjct: 338 TIWRHAVLLLQRGFEVGSILTVDPEEAR-RLGRPKMRRYIY---NQKHCGRCRGPVRSWI 393 Query: 276 QAGRSTFYCTYCQ 288 R+ + C CQ Sbjct: 394 INARTCYACPTCQ 406 >gi|33322761|gb|AAQ07115.1|AF496427_1 formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. lactis] Length = 101 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%) Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 YV E LW+++++P+ L KD + L I + + +A GG+++ +++ + Sbjct: 1 YVDEVLWQSQINPLTPANELT------KDQVKCLHSAINETIEEATKYGGTTVHSFLNAE 54 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G G++Q VYGK G+PC CG+ +I +GR T YC +CQK Sbjct: 55 GESGHYQEKLKVYGKEGQPC-PRCGEDFVKIKISGRGTTYCLHCQK 99 >gi|257069108|ref|YP_003155363.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] gi|256559926|gb|ACU85773.1| formamidopyrimidine-DNA glycosylase [Brachybacterium faecium DSM 4810] Length = 295 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 112/310 (36%), Gaps = 49/310 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + T+T L P +A G + +V R K+L Sbjct: 1 MPEGDTVARQCRILHEALAGATLTGCDLR-------VPRAATADLVGWCVQEVRPRGKHL 53 Query: 61 LIELEG------NLSIIVHLGMSGSFIIE----HTSCAKPIKNPQHNHVTISLTNNTNTK 110 L+ L L++ HL M G + ++ +S P + + + + Sbjct: 54 LLRLLPPSPGAVPLTLHTHLMMDGIWHVDGRALRSSDTSAGPRPAATIRAVLTARHEDGR 113 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI----YLTHQFHKKNSN 166 + R I D ++ + LV T+ + + LGP+ D ++ + + + Sbjct: 114 QTRAIAYDVKQ---VRLVRTADED--SLVGHLGPDLLDPLWDDAHRERAVQNLAAEPERE 168 Query: 167 LKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLI 226 + ALL+Q+ +AGIGNIY E + ++ P T S G L+ + + Sbjct: 169 IGLALLDQRNLAGIGNIYRSELCFLRRVHPAAPTGSAGDLRGFVDLAHRLLVLNQDRAVR 228 Query: 227 DAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-------- 278 + GG RD VYG+ G C I+R Sbjct: 229 --VTTGGMLGRD------------GDLWVYGRGGRQ-CRRCRARIQRGELGDPRLEGTEP 273 Query: 279 RSTFYCTYCQ 288 R ++C CQ Sbjct: 274 RVLWFCPRCQ 283 >gi|76664685|emb|CAJ17783.1| formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma solani] Length = 161 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 13/172 (7%) Query: 14 LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVH 73 L + N + + + K + D GK I+D+ R+ K+LL L NL +I H Sbjct: 3 LKKQLINKQIINTKIFYKPIIKDIVAF--KQIEGKNILDIQRKGKFLLFFLTKNLVLIGH 60 Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 M G I+ + K+ +H H + L +NT+ + Y D R+FG ++ Sbjct: 61 SRMEGKLFIQ----PRQKKHEKHEHFVLFLNDNTSLR-----YYDFRKFGRFEVHHQKDF 111 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 L L +P + + K + LK LLNQ I++G+GNIYV Sbjct: 112 LTKTNLYKLALDPFEIDLM--TFYRKIIKTKTALKTVLLNQNIISGLGNIYV 161 >gi|325068496|ref|ZP_08127169.1| formamidopyrimidine-DNA glycosylase [Actinomyces oris K20] Length = 169 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 4/117 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKN-LRF--DFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE++R L + TVT + + LR F G+ + RR Sbjct: 1 MPELPEVEVVRAGLARHVAGRTVTRVEVLDPRPLRRQDGGAQAFVDQLTGRTLTAAVRRG 60 Query: 58 KYLLIELEGNLSIIVHLGMSGSFIIEHTSCA-KPIKNPQHNHVTISLTNNTNTKKYR 113 K+L + L+ ++ HLGMSG ++ T+ A P P+ + L + R Sbjct: 61 KFLWLPLDDGRALSAHLGMSGQLLVRGTTVATAPDAAPESHRAAAFLADPDTLPGGR 117 >gi|302558039|ref|ZP_07310381.1| endonuclease VIII [Streptomyces griseoflavus Tu4000] gi|302475657|gb|EFL38750.1| endonuclease VIII [Streptomyces griseoflavus Tu4000] Length = 150 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 21/156 (13%) Query: 138 PLRTLGPEPADNSFNAI-YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 + LGP+ ++ L + L ALL+Q+ +AG+GN++ E + ++P Sbjct: 2 AVGHLGPDLLGPDWDPDLALANLLKDPARPLGEALLDQRNLAGVGNVFKSELCFLLGVTP 61 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 L + L K + E + R + G G VY Sbjct: 62 WLPVGDLPADRSAKLPGLAKKLLEFNRE------------RPIRNTTGRRG---QDLYVY 106 Query: 257 GKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 G+ PCL C +R Q R T++C CQ Sbjct: 107 GRARRPCL-RCRTPLRVAEQGDGSRERPTYWCPTCQ 141 >gi|326316600|ref|YP_004234272.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373436|gb|ADX45705.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 249 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 102/291 (35%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +++ + + + + + AA G++++ V K+ Sbjct: 1 MPEGPSLVLLKEAARPLAEGRRIERASGNTTAID-------MAALTGRRVVSVRTWGKHF 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ VH + GSF I+ P+ +SL Y Sbjct: 54 LLELDSGCTVRVHFLLFGSFRIDD---------PKDTPARLSLGFEGGHAID--FYACSV 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK-NALLNQKIVAG 179 R VE L Y + ++++ + + L +ALL+Q + AG Sbjct: 103 RP-----VEGPLDDAYDWRA----DVMSDAWDPALARRRLRARPELLACDALLDQDVFAG 153 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R ++ P +L P L +L+ + + + ++ Sbjct: 154 VGNIIKNEVLFRIRVHPCSPVGAL------PAARLRELVAQARDYAFEFLE--------- 198 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 G + + + + C + R +YC CQ Sbjct: 199 ---WKRQGVLRRHWLAHR---QSECPRCHIPFEKRKLGRTARIAYYCERCQ 243 >gi|145642430|ref|ZP_01797985.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145272868|gb|EDK12759.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 110 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 7/105 (6%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H+H+ I + N V YNDPRRFG E ++P LGPEP F++ Sbjct: 9 KHDHLDIVVNNGKV-----VRYNDPRRFGAWLWTEK--LNEFPLFLKLGPEPLSEEFDSD 61 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRK 199 YL + KK + LK L++ +V G+GNIY E L+ L P +K Sbjct: 62 YLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKK 106 >gi|298384152|ref|ZP_06993713.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 1_1_14] gi|298263756|gb|EFI06619.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 1_1_14] Length = 279 Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 107/295 (36%), Gaps = 26/295 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M E PE + L +K +T++ +F + P ++ GK I + Sbjct: 1 MIEAPEALYLCEQLNKTVKGKRITNVFTLFTPHKFAWFSESPDEYAEWLTGKTIDHARSQ 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 + + + G+ +I+ G++ + A K P + + I + + +Y Sbjct: 61 GGMVEMTI-GDKMLILTDGVNLRYY------APGTKLPAKHQLLIGFEDESCLIASVRMY 113 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF---HKKNSNLKNALLN 173 + + +Y P+ ++F+ Y + + K L Sbjct: 114 GGIMCYSKD--AANGVLSEYYRTAKSKPQVMSDAFSKKYFLGLINDESAQKKSAKAFLAT 171 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 ++ V G+GN + + L+ A + P +K +L L ++++ + D GG Sbjct: 172 EQTVPGLGNGVLQDILYHAHIHPKKKIAALTDKEK------ENLFYQVKETMNDIYLQGG 225 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G G + S G+ C CG+ I + G S +YC CQ Sbjct: 226 RNTES--DLFGENGKYTACLS-KDTAGKAC-PRCGETIVKENYLGGSIYYCRGCQ 276 >gi|254503621|ref|ZP_05115772.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] gi|222439692|gb|EEE46371.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Labrenzia alexandrii DFL-11] Length = 168 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 13/174 (7%) Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQ 174 D ++++ + +GP+ + + + + K S++ L+NQ Sbjct: 6 HLIDINGPTVCEILDPDDLTKLT--SRIGPDILRSDADPEKVFARISKSRSSIGKLLMNQ 63 Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 ++AGIGNIY E LWR + P R + L + D +L + +L + Sbjct: 64 AVLAGIGNIYRSEILWRQGIHPDRPGKDLSR------DDFERLWADAVHLLEIGVKRNAI 117 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 D G ++ +++GK C C I ++ R ++C+ CQ Sbjct: 118 ITVD--EAAPGRGRYRERVNIFGK--RSC-PTCAGGITQVEIDTRKAYFCSTCQ 166 >gi|120610528|ref|YP_970206.1| formamidopyrimidine-DNA glycolase [Acidovorax citrulli AAC00-1] gi|120588992|gb|ABM32432.1| Formamidopyrimidine-DNA glycolase [Acidovorax citrulli AAC00-1] Length = 254 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 105/291 (36%), Gaps = 51/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +++ + + + + + +AA G++++ V K+ Sbjct: 1 MPEGPSLVLLKEAARPLAEGRRIERASGNTTAID-------TAALPGRRVVSVRTWGKHF 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+EL+ ++ VH + GSF I+ P+ +SL Y Sbjct: 54 LLELDSGCTVRVHFLLFGSFRIDD---------PKDAPARLSLGFEGGHAID--FYACSV 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK-NALLNQKIVAG 179 R VE L Y + ++++A + L +ALL+Q + AG Sbjct: 103 RP-----VEGPLDGAYDWRA----DVMSDAWDAALARRRLRAHPEVLACDALLDQDVFAG 153 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R ++ P+ +L P L +L+ + ++ + ++ Sbjct: 154 VGNIIKNEVLFRIRVHPLSPVGAL------PATRLRELVAQAREYAFEFLE--------- 198 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 G + + + + C + R +YC CQ Sbjct: 199 ---WKRQGVLRRHWLAHR---QSECPRCHIPFEKRKLGRTARIAYYCERCQ 243 >gi|319778283|ref|YP_004129196.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] gi|317108307|gb|ADU91053.1| Formamidopyrimidine-DNA glycosylase [Taylorella equigenitalis MCE9] Length = 317 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 122/327 (37%), Gaps = 79/327 (24%) Query: 1 MPELPEVEIIRRNLMMVM-------KNMTVTDI----------CLHRKNLRFDFPHHF-- 41 MPELPEVE+ +++L ++ ++ T+ + + +N + DF Sbjct: 1 MPELPEVEVTKQDLYSMILESEVGTESKTIAKVLPYTKEFFTAKTNPRNNKKDFLAQILK 60 Query: 42 ----SAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMS-------------------G 78 KI + R AKY++I + +L ++HLGMS G Sbjct: 61 YDDRRKELENSKITSIYRIAKYIIISTDASLHFVIHLGMSATVYSIIATPNDRKLIESGG 120 Query: 79 SF-IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYP 137 ++ + + +H+H L + +++D RRFG ++ ++ Sbjct: 121 GLEFLDFLNSSTDRVFARHHHTGFLLKDGRI-----FLFHDVRRFGEWAVLTDDELNKFK 175 Query: 138 PLRTLGPEPADNSFNAIYL-----------THQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 +P ++F++ L T ++++ N L + + + G G IY Sbjct: 176 DGFGSSWDPHLSNFDSKSLIEFINNHPQKTTRKWNQSNMGLLSFIGKSGAIKGCGAIYSR 235 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR--------- 237 E ++ + L P SL + + L +Q VL ++I GG++ Sbjct: 236 EVVFASGLDPSTPISSLKEYDWIN------LANSMQTVLSESISDGGTAFNSKDTDDADS 289 Query: 238 -----DYVHIDGSIGYFQNAFSVYGKT 259 D+V G + +Q Y K Sbjct: 290 VRSRGDFVRPSGQLSRYQEKLKSYKKK 316 >gi|156186050|gb|ABU55343.1| formamidopyrimidine-DNA glycosylase [Callosobruchus chinensis] Length = 131 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 13/133 (9%) Query: 95 QHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 +H+HV ++NT+ +I+NDPRRFG + ++ + + G EP + F+ Sbjct: 12 KHDHVVFLFSDNTS-----IIFNDPRRFGLVIILSKEQEINF--FDGFGIEPLTDEFSGD 64 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 YL KK N+K+AL++ K++ G+GNIY E+L+RA++SP+R + L Sbjct: 65 YLQELLKKKKVNIKSALMDDKLIVGVGNIYASESLFRARISPLRSAKDLTYRE------C 118 Query: 215 YKLIQEIQKVLID 227 KL EI+ L D Sbjct: 119 EKLAAEIKNTLSD 131 >gi|18762512|gb|AAL78080.1| Fpg [Yersinia enterocolitica] Length = 90 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 7/94 (7%) Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P R SL + L + I+ VL +I+ GG++LRD++ DG GYF V Sbjct: 4 PDRPAGSLTRAQA------ALLAKTIKAVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQV 57 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 YG+ GEPC CG I RSTF+C CQ+ Sbjct: 58 YGRAGEPC-RTCGTPIESAKHGQRSTFFCRRCQR 90 >gi|317473256|ref|ZP_07932552.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] gi|316899250|gb|EFV21268.1| formamidopyrimidine-DNA glycosylase [Anaerostipes sp. 3_2_56FAA] Length = 273 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 36/298 (12%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRF----DFPHHFSAATRGKKIIDVS 54 M +LPE + R L +K + +F + G+K++D Sbjct: 1 MIKLPE--ALARADELKSELKGKRAEKVWPPSSPHKFCWFNGEASSYDDMLSGRKVVDAQ 58 Query: 55 RRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRV 114 + I EG+L + + G + + P + I ++ T Sbjct: 59 GFGIFAEIIFEGDLRVCFNDG------VNVRIFGEGDNIPGKYQLRIDFSDGTVLVFTVA 112 Query: 115 IYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF--HKKNSNLKNALL 172 +Y G + + S +Y + P F+ Y K N + K L Sbjct: 113 MY------GSIACADGSYDNEYYIVSKNSISPISPEFDHTYFFGLLDSAKPNLSAKAFLA 166 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 ++ + G+GN + + L+ A + P +K S ++ L I++VL + + Sbjct: 167 TKQRIPGLGNGVLQDILFEAGIHPKKKIGSFTEHEK------ELLFVSIKEVLSEMVRLR 220 Query: 233 GSSLRDYVHIDGSIGYFQNAF--SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + G+ G ++ + Y K G P CG I + G + ++C CQ Sbjct: 221 GRDTE--KDLWGNPGGYKTKLSKNTY-KDGCP---KCGGEITKAAYLGGTVYFCPECQ 272 >gi|302842791|ref|XP_002952938.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] gi|300261649|gb|EFJ45860.1| hypothetical protein VOLCADRAFT_118227 [Volvox carteri f. nagariensis] Length = 686 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 10/166 (6%) Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIG 181 M + SL+ LGP+P + L + + + L++Q +VAG+G Sbjct: 42 LSAMTVTHGSLELYTRKAAQLGPDPLREDADKELLRAKVARSRKPIGLVLMDQSMVAGVG 101 Query: 182 NIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVH 241 NIY E L++A + P L D ++ +L +G D Sbjct: 102 NIYRAEILFKAGVHPELPACDLT------SDQFDRIWYHTVSLLQRGFVSGSILTVDGWE 155 Query: 242 IDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +G +Y + + C C +R AGR+ + C C Sbjct: 156 A-KVLGRPWTRRYIYNQ--QVCG-RCKGPVRTWQMAGRTVYCCENC 197 >gi|146545|gb|AAA03747.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] gi|146558|gb|AAA24045.1| formamidopyrimidine-DNA glycosylase [Escherichia coli] Length = 89 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 7/96 (7%) Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 + P R SL L + I+ VL+ +I+ GG++L+D++ DG GYF Sbjct: 1 IHPDRLASSLSLAE------CELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQEL 54 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ GEPC CG I A R+TFYC CQK Sbjct: 55 QVYGRKGEPC-RVCGTPIVATKHAQRATFYCRQCQK 89 >gi|289755420|ref|ZP_06514798.1| endonuclease VIII nei [Mycobacterium tuberculosis EAS054] gi|289696007|gb|EFD63436.1| endonuclease VIII nei [Mycobacterium tuberculosis EAS054] Length = 147 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 23/155 (14%) Query: 139 LRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 + LGP+ + ++ + + ALL+Q+++AGIGN+Y E + + + P Sbjct: 12 VAHLGPDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPT 71 Query: 198 RKTRSLIQNN---GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFS 254 ++ +D+L+ + AG Sbjct: 72 APVSAVADPRRLVTRARDMLWVNRFRWNRCTTGDTRAG------------------RRLW 113 Query: 255 VYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+ C CG +I R ++C CQ+ Sbjct: 114 VYGRAGQGC-RRCGTLIAYDTTDERVRYWCPACQR 147 >gi|255017643|ref|ZP_05289769.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL F2-515] Length = 83 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKIIDVSRRAKY 59 MPE+PEVE +R L ++ + + + + P F G++I V RR K+ Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF 60 Query: 60 LLIELEGNLSIIVHLGMSGSFII 82 LL +L N +I+ HL M G F + Sbjct: 61 LLFDLT-NCTILSHLRMEGKFRL 82 >gi|307103677|gb|EFN51935.1| hypothetical protein CHLNCDRAFT_9497 [Chlorella variabilis] Length = 150 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 18/160 (11%) Query: 131 SLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALW 190 PP+ LG +P + + Q + +K LL+Q AGIGN E L+ Sbjct: 6 DRPEGVPPISELGWDPLLDMPSLPSFAAQLGGQRRAIKAVLLDQSFSAGIGNWVADEVLY 65 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 +A++ P + S+ P++ + L + I V A + S R F Sbjct: 66 QARIHPEQPAHSV------PQEQVAALHRAISHVCQVACEVEADSSR-----------FP 108 Query: 251 NAFSVYGKTGEPCLSNCGQM-IRRIVQAGRSTFYCTYCQK 289 + + + G + G I + GR++ + QK Sbjct: 109 PDWLFHHRWGNSTPAKVGGRSIDHLTVGGRTSAFVPSLQK 148 >gi|255033949|ref|YP_003084570.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Dyadobacter fermentans DSM 18053] gi|254946705|gb|ACT91405.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Dyadobacter fermentans DSM 18053] Length = 248 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 105/293 (35%), Gaps = 55/293 (18%) Query: 1 MPELPEVEIIRRNLMM-VMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE P + I+R + +K TV + R + D +K+ D K+ Sbjct: 1 MPEGPSIVILREAIEALHLKGETV-RLAEGRAKIDMD-------RLINQKVTDFRSWGKH 52 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119 LI ++ +H + GS+ I+ A P H+++ K+ + + Sbjct: 53 FLICF-KGFTVRIHFLLFGSYYIDDRKKAPP-------HLSLLFD------KHELNFYTT 98 Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK-NALLNQKIVA 178 + L+E + Y + +N+ + + L +ALL+Q I A Sbjct: 99 S----IQLIEQPAEEIYDWSA----DIMAEKWNSRAAFKKLKENPEMLACDALLDQDIFA 150 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G GNI E L+R ++ P L P L ++++E + D ++ Sbjct: 151 GSGNIIKNEVLFRTRIHP------LSTIADIPDAKLKEMVKETRSYAFDFLE-------- 196 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 G + + + K P C + R ++YC CQ+ Sbjct: 197 ----WKKEGTLKKHWLAHTKKICP---RCNIPFHKEYLGRTKRRSYYCESCQR 242 >gi|194702244|gb|ACF85206.1| unknown [Zea mays] Length = 229 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 17/139 (12%) Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + +K +K LL+Q ++GIGN E L+++++ P++ +L P Sbjct: 1 MSVDSFLDSLGRKKIGIKALLLDQSFISGIGNWIADEVLYQSRIHPLQIASNL------P 54 Query: 211 KDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM 270 ++ L Q I++V+ A++ +D + F + + + G+ G+ Sbjct: 55 RESCEALHQSIEEVVKYAVE-----------VDADMDRFPKEWLFHHRWGKKPGKVDGKK 103 Query: 271 IRRIVQAGRSTFYCTYCQK 289 I I GR+T Y QK Sbjct: 104 IEFITAGGRTTAYVPQLQK 122 >gi|311272274|ref|XP_001926185.2| PREDICTED: endonuclease 8-like 3 [Sus scrofa] Length = 596 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 89/254 (35%), Gaps = 45/254 (17%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G V K L + G ++ +H GM GS I +S Sbjct: 68 RLLNGHVYSGVETLGKELFMYF-GPKALRIHFGMKGSLAINPLESKSKNG--------VS 118 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFH 161 K + + D +++ T+ Q + L + F+ + Sbjct: 119 PVFEVQLTKDLICFFDSS----VEIRNTAESQQRIRMMEEL--DVCSPKFSFSRAEREVK 172 Query: 162 KKN-SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K+ L + L++QK++ G+GNI EAL+ + L P K L L K+I + Sbjct: 173 KQGGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTH---HLVKMIHD 229 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIV 275 + AG + + Y VY + NCGQ + R+ Sbjct: 230 FSILFYRCCKAGSAVSKHY--------------KVYKR------PNCGQCFCKITVCRLG 269 Query: 276 QAGRSTFYCTYCQK 289 + R T++C +CQK Sbjct: 270 ENNRMTYFCPHCQK 283 >gi|301778739|ref|XP_002924787.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 3-like [Ailuropoda melanoleuca] Length = 603 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 92/276 (33%), Gaps = 35/276 (12%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLG 75 ++ V D +F G V K L + G ++ +H G Sbjct: 41 PHAASLAVVSTQAAAPTNNKDSSQNFLRLFSGYVYSGVQTLGKELFLYF-GPKALRIHFG 99 Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-TSLKY 134 M GS I C +S + R+ + D ++L T + Sbjct: 100 MKGSIQINPFECKNKNG--------VSPVFEVQLTEDRICFFDSS----VELRNSTESQQ 147 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 + + L + F+ + K K L + L++Q ++ G+GNI EAL+ + Sbjct: 148 RVRMMEEL--DVCSPKFSFSRAESEVKKQKGRMLCDVLMDQIVLPGVGNIIKNEALFDSG 205 Query: 194 LSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 L P K L L K+I++ + G + Y Sbjct: 206 LHPAVKVCQLTDEQTHY---LVKMIRDFSILFYRCHKTGSVISKHY-------------- 248 Query: 254 SVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VY + C C + R+ + R T++C CQK Sbjct: 249 KVYKRPNC-CQCCCKITVCRLGENNRMTYFCPRCQK 283 >gi|73979610|ref|XP_532852.2| PREDICTED: similar to Endonuclease VIII-like 3 (Nei-like 3) (DNA glycosylase FPG2) [Canis familiaris] Length = 771 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 35/256 (13%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D +FS G V K LL+ G ++ +H GM GS +I P++N Sbjct: 228 DSSQNFSRLLNGCVYCGVQTLGKELLMYF-GPKALRIHFGMKGSIMIN------PLENKN 280 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAI 154 N V+ L K + + D ++ ++ Q + L + F+ Sbjct: 281 KNGVSPVLEI--QLTKDLICFFDSS----VEFRNSAESQQRVRMMEEL--DVCSPKFSFS 332 Query: 155 YLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + K K L + L++Q+++ G+GNI EAL+ + L P K L Sbjct: 333 RAESEVKKQKGRMLCDVLMDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHY--- 389 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRR 273 L K+I++ + G + Y VY + C C + R Sbjct: 390 LVKMIRDFSILFYRCRKTGSVISKHY--------------KVYKRPNC-CQCCCKITVCR 434 Query: 274 IVQAGRSTFYCTYCQK 289 + + R T++C CQK Sbjct: 435 LGENNRMTYFCPRCQK 450 >gi|190344984|gb|EDK36784.2| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 101/334 (30%), Gaps = 97/334 (29%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELE----------GNLSIIVHLGMSGSFIIEH------ 84 G +I V R KY + L + +++H GM+G + + Sbjct: 1 MKNTLLGSRIDSVGRHGKYFWMRLNLANGPDLAKAPSGVLLMHFGMTGMIKLRNIDSHLT 60 Query: 85 ------------------------------------TSCAKPIKNPQHNHVTISLTNNTN 108 P+ + L N Sbjct: 61 FMENGGDKKVLEKMKVAVKQETTETVTVPKDDKDTKDDVKDEEWPPKFVKFEMDL-EREN 119 Query: 109 TKKYRVIYNDPRRFGFMDLVE------TSLKYQYPPLRTLGPE----------------- 145 + + + DPRR G + L+ L + PL++LGP+ Sbjct: 120 GEVIELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKSAEGKTTDKFVYGD 179 Query: 146 PA-----DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 P + K +K+ LL Q++ +G+GN E ++ A+L P Sbjct: 180 PDPHHHGRPRLSLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHPNEVI 239 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF-----SV 255 S I N+G ++ +L + V V ++G + F + + Sbjct: 240 SSKISNDGNVSQVIKELYNALIYVCEYC-----------VSVEGEVTQFPDNWLMPYRWG 288 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ E + G + GR++ + QK Sbjct: 289 KGRKQEKSKTKEGYQVDHGTVGGRTSCFVPELQK 322 >gi|118090127|ref|XP_426306.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 611 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 37/248 (14%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G+ V K L + + ++ +H GM+GS I + ++ + I LT Sbjct: 108 LTGQVFRGVETLGKELFMYFDQ-KALRIHFGMNGSMRINPDG--RQDRSGALPVLEIRLT 164 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-K 163 +T + + + T + + + +L + F+ + + + K Sbjct: 165 EDTIC-----FFEVTAEYRNV----TECEQRVRMMESL--DVCSPKFSFLRAESEVKQQK 213 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 L + LL+Q+++ G+GNI EAL+ + L P K L + + L++ + Sbjct: 214 TRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAAKVCQLTD------EHIRHLVKMTRD 267 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRST 281 + + Y H + VY + + C S C + I R T Sbjct: 268 FTLLFYKCRKTGSPLYKH-----------YKVYRR--QTC-SQCNEKITVCRLGENNRMT 313 Query: 282 FYCTYCQK 289 ++C+ CQK Sbjct: 314 YFCSRCQK 321 >gi|319788269|ref|YP_004147744.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudoxanthomonas suwonensis 11-1] gi|317466781|gb|ADV28513.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 101/295 (34%), Gaps = 59/295 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R V + + + G++++ + K+ Sbjct: 17 MPEGPTI-VILREAAAGFVGRKVRAVHGNSR--------EPIQRIAGRRLVAMHSWGKHF 67 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--VIYND 118 L+ + + S+ +H + GS+ I + P + + + Y V + D Sbjct: 68 LLAFD-DFSVRIHFMLFGSYRINE-------RKPTPARLGLEFSRGGELNFYACSVRFID 119 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIV 177 D + +++++ + + L ALL+Q + Sbjct: 120 QPLDEVYDWSA---------------DVMNDAWDPAAARRKLRARPQALAADALLDQDVF 164 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG+GNI E L R ++ P + +L P L +L+ E ++ D ++ Sbjct: 165 AGVGNIIKNEVLHRIRVHPESRIGAL------PPRKLGQLVAEARQYSFDFLE------- 211 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-RIVQAG--RSTFYCTYCQK 289 + + V+ K P G + R R F+C+ CQ+ Sbjct: 212 -----WKKAYVLRKHWQVHAKKTCP---RDGTELSYRKELGQARRRAFWCSVCQR 258 >gi|194226547|ref|XP_001492738.2| PREDICTED: similar to nei endonuclease VIII-like 3 (E. coli) [Equus caballus] Length = 606 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 39/258 (15%) Query: 36 DFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQ 95 D + S G V K L + G ++ +H GM GS II P ++ + Sbjct: 60 DSSQNVSRLFDGYVYSGVETLGKELFMYF-GPKALWIHFGMKGSIIIN------PPEDKK 112 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG-PEPADNSFNAI 154 + V+ K + + D ++L ++ Q +R +G + F+ Sbjct: 113 KDGVSPVFE--VQLTKDLICFFDSS----VELRNSTESQQ--RIRIMGELDICSPKFSFS 164 Query: 155 YLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + K K L + L++QK++ G+GNI EAL+ + L P K L Sbjct: 165 RAESEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTH---H 221 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMI 271 L K+I++ + AG + R Y VY + G+ C C + Sbjct: 222 LVKMIRDCSILFYKCRKAGCAISRHY--------------KVYKRPNCGQCC---CKITV 264 Query: 272 RRIVQAGRSTFYCTYCQK 289 R+ + R T++C +CQK Sbjct: 265 CRLGENHRMTYFCPHCQK 282 >gi|325128283|gb|EGC51167.1| formamidopyrimidine-DNA glycosylase [Neisseria meningitidis N1568] Length = 72 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 +++ ++ VL AI+ GGS+LRD+V DG GYFQ ++VYG+ +PC CG ++ + Sbjct: 1 MVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPC-PQCGGLVVKETL 59 Query: 277 AGRSTFYCTYCQK 289 R TFYC CQK Sbjct: 60 GQRGTFYCPNCQK 72 >gi|21232956|ref|NP_638873.1| endonuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766971|ref|YP_241733.1| endonuclease [Xanthomonas campestris pv. campestris str. 8004] gi|21114796|gb|AAM42797.1| endonuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572303|gb|AAY47713.1| endonuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 250 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 100/293 (34%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R + + + K A + +K++ + K+L Sbjct: 1 MPEGPSL-VILREEAAAFVGRKILRVQGNSKQDI--------ARLQQQKVLALRSWGKHL 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE S+ +H + GS+ I KP P + + + Y Sbjct: 52 LIEC-AQFSVRIHFLLFGSYRINED---KPNAVP---RLRLEFSKGETLNFYACSVQ--- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 +E L Y + + ++A + L ALL+Q I +G Sbjct: 102 ------FIERPLDEVYDWSA----DVMNPLWDAAQARLKLRAAPQLLAADALLDQSIFSG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P + +L P L +L+ + + D Sbjct: 152 VGNIIKNEVLHRIRVHPESQVGAL------PARKLGELVTQARDYSFDFY---------- 195 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 196 --TWKKAFVLKKRYQVHTKTICP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|281332206|ref|NP_001163817.1| endonuclease VIII-like 3 [Rattus norvegicus] Length = 606 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 87/246 (35%), Gaps = 37/246 (15%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM GS +I C N +S Sbjct: 71 GCVYSGVETLGKELFMYF-GPRALRIHFGMKGSILINPPKCE--------NRGGVSPAFE 121 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNS 165 + + D + S++ Q G + F+ + K ++ Sbjct: 122 VQLTNDLICFFDSSVK-----LRNSVESQQRVRMMEGLDVCSPKFSLSRAESEVKKQRDR 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 L + LL+Q+++ G+GNI EAL+ + L P K L L K+ ++ + Sbjct: 177 MLCDVLLDQRVLPGVGNIIKNEALFDSGLHPTVKVCQLSDKQAH---HLVKMTRDFSILF 233 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFY 283 AG + + Y VY + P + C IR R T++ Sbjct: 234 YRCRKAGSAISKHY--------------KVYKR---PNCAQCHCKIRVCRLGENSRMTYF 276 Query: 284 CTYCQK 289 C +CQK Sbjct: 277 CPHCQK 282 >gi|159472486|ref|XP_001694382.1| hypothetical protein CHLREDRAFT_103375 [Chlamydomonas reinhardtii] gi|158277045|gb|EDP02815.1| predicted protein [Chlamydomonas reinhardtii] Length = 199 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 24/194 (12%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS-IIVH 73 ++ N RF A K + + K L G++ + VH Sbjct: 24 RKLLVGK---SFQARSPNGRFKEGAALINA---KPLTRIEVHGKNLFYFFGGDVVVMHVH 77 Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 GMSG+F P + + L + + K Sbjct: 78 FGMSGAFRTMELPGLPPT-----DTTRLELLHKVSVKGKTQTVV------------CVCV 120 Query: 134 YQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAK 193 LG +P + L + K ++ L++Q ++AG+GNIY E L++A+ Sbjct: 121 CVCVCAAALGQDPLREDADKEVLWAKVQKSKKSIGLVLMDQTLIAGVGNIYRAEILYKAR 180 Query: 194 LSPIRKTRSLIQNN 207 + P S+ + Sbjct: 181 VHPELPAASVSREQ 194 >gi|302695915|ref|XP_003037636.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8] gi|300111333|gb|EFJ02734.1| hypothetical protein SCHCODRAFT_231883 [Schizophyllum commune H4-8] Length = 267 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 42/232 (18%) Query: 76 MSG---------SFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 M+G ++ I P+ + + T ++ + D RR G + Sbjct: 1 MTGMIQVKGSAATYYISSKRLVGDEWPPRFMKFILHFFDGT-----QLAFMDARRLGRIR 55 Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 L L P+ LG +P + + ++ +K LL+Q AG+GN Sbjct: 56 LCADPLHET--PISELGFDPILSMPSRQDFEKLMTRRKCPVKALLLDQSFSAGVGNWVAD 113 Query: 187 EALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSI 246 E L+ A++ P R+ +L L L + + +V A++A S + Sbjct: 114 EILYHARVHPERRCNTLTGEE------LDGLHRWMGEVCRIAVEADADSEKFPEDWL--- 164 Query: 247 GYFQNAFSVYGKT---------GEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 F + + K GEP I+ + GR++ Y QK Sbjct: 165 --FNHRWDKGKKNKPQTMTLPSGEP------ATIKWVTVGGRTSAYVDELQK 208 >gi|146423146|ref|XP_001487505.1| hypothetical protein PGUG_00882 [Meyerozyma guilliermondii ATCC 6260] Length = 386 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 100/334 (29%), Gaps = 97/334 (29%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELE----------GNLSIIVHLGMSGSFIIEH------ 84 G +I V R KY + L + +++H GM+G + + Sbjct: 1 MKNTLLGSRIDSVGRHGKYFWMRLNLANGPDLAKAPSGVLLMHFGMTGMIKLRNIDSHLT 60 Query: 85 ------------------------------------TSCAKPIKNPQHNHVTISLTNNTN 108 P+ + L N Sbjct: 61 FMENGGDKKVLEKMKVAVKQETTETVTVPKDDKDTKDDVKDEEWPPKFVKFEMDL-EREN 119 Query: 109 TKKYRVIYNDPRRFGFMDLVE------TSLKYQYPPLRTLGPE----------------- 145 + + + DPRR G + L+ L + PL++LGP+ Sbjct: 120 GEVIELAFVDPRRLGRVRLLTGETVQSDELLMEEAPLKSLGPDYSKLAEGKTTDKFVYGD 179 Query: 146 PA-----DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 P K +K+ LL Q++ +G+GN E ++ A+L P Sbjct: 180 PDPHHHGRPRLLLQEFNDLVLLKKKPIKSMLLEQELFSGVGNWVADEIIYHARLHPNEVI 239 Query: 201 RSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF-----SV 255 S I N+G ++ +L + V V ++G + F + + Sbjct: 240 SSKISNDGNVSQVIKELYNALIYVCEYC-----------VSVEGEVTQFPDNWLMPYRWG 288 Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 G+ E + G + GR++ + QK Sbjct: 289 KGRKQEKSKTKEGYQVDHGTVGGRTSCFVPELQK 322 >gi|188990064|ref|YP_001902074.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris str. B100] gi|167731824|emb|CAP50008.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. campestris] Length = 275 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 101/293 (34%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I R + + + K A + +K++ + K+L Sbjct: 26 MPEGPSL-VILREEAAAFVGRKILRVQGNSKQDI--------ARLQQQKVLALRSWGKHL 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE S+ +H + GS+ I KP P +++ + Y Sbjct: 77 LIEC-AQFSVRIHFLLFGSYRINED---KPNAVP---RLSLEFSKGETLNFYACSVQ--- 126 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 +E L Y + + ++A + L ALL+Q I +G Sbjct: 127 ------FIERPLDEVYDWSA----DVMNPLWDAAQARRKLRAAPQLLAADALLDQSIFSG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P + +L P L +L+ + + D Sbjct: 177 VGNIIKNEVLHRIRVHPESQVGAL------PARKLGELVTQARDYSFDFY---------- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 221 --TWKKAFVLKKRYQVHTKTICP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|126331299|ref|XP_001371089.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 635 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 86/253 (33%), Gaps = 37/253 (14%) Query: 40 HFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV 99 +F G V K L + G ++ +H GM+G +I K P Sbjct: 70 NFPGLLNGCVYSGVETLGKELFMYF-GLKALRIHFGMNGFVLINPLKSKNQTKTPP---- 124 Query: 100 TISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ 159 + TK Y+ F K + + L + FN ++ Sbjct: 125 ---VFEVQLTKDLICFYDSSVEFRN----AMESKQKIRMMEDL--DVCSPKFNFSRAENE 175 Query: 160 FHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLI 218 K K+ L + L++Q ++ GIGNI EAL+ + L P K L L K+I Sbjct: 176 VKKQKDRMLCDVLMDQNVLPGIGNIIKNEALFDSGLHPAVKVSQLKDEQTH---HLVKMI 232 Query: 219 QEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA- 277 ++ + G + R Y VY ++ C C I Sbjct: 233 RDFTIFFYECRKTGAALYRHY--------------KVYKRSD--CG-QCSSKITVCRLGE 275 Query: 278 -GRSTFYCTYCQK 289 R T++C CQK Sbjct: 276 NNRMTYFCPRCQK 288 >gi|266623106|ref|ZP_06116041.1| DNA-formamidopyrimidine glycosylase [Clostridium hathewayi DSM 13479] gi|288865143|gb|EFC97441.1| DNA-formamidopyrimidine glycosylase [Clostridium hathewayi DSM 13479] Length = 225 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 24/230 (10%) Query: 62 IELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRR 121 +E +G + + + G + K P+ + + T+ + +Y Sbjct: 12 LEFDGGVRLGFNDG------VNPRFIRKEEVRPKKYQLLLEFTDGSAIGFTVAMYGSIS- 64 Query: 122 FGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH--KKNSNLKNALLNQKIVAG 179 + +Y + ++ P F+ Y K + K L ++ + G Sbjct: 65 ---CHSGDYDNEYYRKSIESISP--LTEEFDERYFKELLASVKSAMSAKAFLAAEQRIPG 119 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GN + + L++A + P RK +L L ++++ VL + GG Sbjct: 120 LGNGCLQDILFQAGIHPQRKVLTLSDCEQNV------LWKQVRMVLQAMTEQGGRDTE-- 171 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ G +Q S T CG I + G + +YC CQK Sbjct: 172 KDLFGNPGGYQTLMS--KNTVASGCPACGGGIIKETYLGGAVYYCPSCQK 219 >gi|326918598|ref|XP_003205575.1| PREDICTED: endonuclease 8-like 3-like, partial [Meleagris gallopavo] Length = 546 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 37/248 (14%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G+ V K + + ++ +H GM+GS I + + Sbjct: 14 LSGQVFRGVETLGKEFFMYFDQ-KALRIHFGMNGSMRINPDRSKDRNGALP----VLEIQ 68 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KK 163 +T + + + R + + + +L + F+ + + +K Sbjct: 69 LIEDTICFFEVTAEYRNVAEC-------EQKVRMMESL--DVCSPKFSFLRAESEVKQQK 119 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 L + LL+Q ++ G+GNI EAL+ + L P K L + + L++ + Sbjct: 120 TQMLCDVLLDQTVLPGVGNIIKNEALFDSGLHPAAKVCQLTD------EHIRHLVKMTRD 173 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRST 281 + + Y H + VY + + C C + I R T Sbjct: 174 FTLLFYKCRKTGSPLYKH-----------YKVYRR--QTCG-QCNEKITVCRLGENNRMT 219 Query: 282 FYCTYCQK 289 ++C+ CQK Sbjct: 220 YFCSRCQK 227 >gi|325526891|gb|EGD04365.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Burkholderia sp. TJI49] Length = 65 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCT 285 DAI+ GGS+LRD+V +G GYFQ VY + G PC CG IR+IVQ RST++C Sbjct: 3 ADAIERGGSTLRDFVGSNGESGYFQLDCFVYDRAGAPC-RVCGTPIRQIVQGQRSTYFCP 61 Query: 286 YCQK 289 CQ+ Sbjct: 62 TCQR 65 >gi|145637015|ref|ZP_01792679.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] gi|145269873|gb|EDK09812.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittHH] Length = 98 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 7/92 (7%) Query: 198 RKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 + SL + +L+++I++VL +AI GG++L+D++ DG GYF VYG Sbjct: 13 KTAGSLTKAQ------CGQLVEQIKQVLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYG 66 Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 +PC CG I +V R++FYC CQK Sbjct: 67 NKDKPC-PTCGTKIESLVIGQRNSFYCPKCQK 97 >gi|158313065|ref|YP_001505573.1| formamidopyrimidine-DNA glycolase [Frankia sp. EAN1pec] gi|158108470|gb|ABW10667.1| Formamidopyrimidine-DNA glycolase [Frankia sp. EAN1pec] Length = 295 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 19/157 (12%) Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 R ++++ T+ + + + LGP+ + ++ + +ALL+Q+++AG Sbjct: 33 RLPVVEILPTAQEDRV--VGHLGPDVLGDDWDLDRAVANLRAEPTREIGSALLDQRLLAG 90 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI+ EA + A +SP + G + + +I A GG Sbjct: 91 LGNIWRTEACFLAGVSPWTPVGEVNDLEGLVRRA---------QAMIRAGARGG------ 135 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ 276 + VYG+ G PC CG ++RR Q Sbjct: 136 HQVTTGSARPGEQHWVYGRAGRPC-RRCGTLVRRQEQ 171 >gi|325919288|ref|ZP_08181328.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] gi|325550220|gb|EGD21034.1| formamidopyrimidine-DNA glycosylase [Xanthomonas gardneri ATCC 19865] Length = 250 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 98/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILREQ-TEAFVGRKILRVSGKSKQDI--------ARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE S+ +H + GS+ I+ KP P + + + Y Sbjct: 52 LIEC-AQFSVRIHFLLFGSYRIDED---KPNAVP---RLRLEFSKGQRLNFYACSVQFID 104 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 R ++ + + +P ++ + S L ALL+Q I AG Sbjct: 105 RP-LDEVYDWTADVMHPL------------WDGAQARRKLRAAPSMLAADALLDQSIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 152 VGNIIKNEVLHRIRVHPESAVGAL------PARKLGELVTQARDYSFDFY---------- 195 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 196 --TWKKAFVLKKNYQVHTKTSCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|256425260|ref|YP_003125913.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Chitinophaga pinensis DSM 2588] gi|256040168|gb|ACU63712.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Chitinophaga pinensis DSM 2588] Length = 246 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 104/293 (35%), Gaps = 59/293 (20%) Query: 1 MPELPEVEIIRRNLMMVM--KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P + I+R V+ + V D+ + R KKII K Sbjct: 1 MPEGPSIVILR---EEVLSFRGKEVIDVA--------GYAKIDLERLRNKKIIAFKSWGK 49 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 + LI ++ +HL M G++ I + P T+ L + Sbjct: 50 HFLICF-KGFTVRIHLLMFGTYRINEKKNSNP---------TLHLQFAKGELNFYTC--- 96 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIV 177 + +++ SL Y + + +++ + + + +ALLNQ I Sbjct: 97 -----AVRIIDESLDEVYDWSG----DVMNEAWDPKKAMAKLKEVPEMLVADALLNQDIF 147 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 AG GNI E L+R ++ P K L P +L++E+ Sbjct: 148 AGSGNIIKNEVLFRIRVHPETKVGDL------PLKKKRELVKEVVNYSF----------- 190 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG--RSTFYCTYCQ 288 D++H ++ + T + C C ++ R TFYCT CQ Sbjct: 191 DFLHWKKEYKLKEHWLA---HTKKIC-PRCHIPFQKAYIGTTKRRTFYCTNCQ 239 >gi|289667477|ref|ZP_06488552.1| DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 250 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 99/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TEAFVGRKILRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE N S+ +H + GS+ I KP P + + + Y Sbjct: 52 LIEC-ANFSVRIHFLLFGSYRINED---KPNAVP---RLCLEFSKGQRLNFYACSVQ--- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 +E L Y + + ++A + L ALL+Q I AG Sbjct: 102 ------FIECPLDEVYDWTA----DVMNPLWDAAQARRKLRAMPGMLAADALLDQTIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 152 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 195 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 196 --TWKKAFVLKKHYQVHTKTSCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|224009399|ref|XP_002293658.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971058|gb|EED89394.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 271 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 92/263 (34%), Gaps = 71/263 (26%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHR---------------KNLRFDFPHHFSAAT 45 MPELPEVE R+ L+ + +T + + F + A Sbjct: 1 MPELPEVEKFRQILLPLTAAVTKSKVNSSSSSSACTITIACPSPTPPKVFPSQNDIDAIN 60 Query: 46 RG-KKIIDVSRRAKYLLIEL-----------------EGNLS-------------IIVHL 74 RG + DV R+ K L I L + + +H+ Sbjct: 61 RGGYAVGDVLRKGKVLCIVLKKQTQSAAAERATKRRRTNGDTDSCNITGNEPTIYLSLHM 120 Query: 75 GMSGSFIIEHTSCAKP------IKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL- 127 GM+G + P H H+ I T + ++DPRRFG + Sbjct: 121 GMTGRISSPGNVPSLESLSECDEYPPPHTHMIIKSTESEAC------FSDPRRFGSASVF 174 Query: 128 -VETSLKYQYPPLRTLGPEPADNSF----------NAIYLTHQFHKKNSNLKNALLNQK- 175 V P + L P+ ++S + Q + +K LL+Q+ Sbjct: 175 GVWCEGGDLIPSFKDLAPDALESSAGYSCANDVSKMGRKIAEQLSNQRRGIKAVLLDQRA 234 Query: 176 IVAGIGNIYVCEALWRAKLSPIR 198 +V+G+GN E L+R+KL P + Sbjct: 235 VVSGVGNWVADEILYRSKLHPDQ 257 >gi|296085164|emb|CBI28659.3| unnamed protein product [Vitis vinifera] Length = 118 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 + ++L+ GM+G+ I+ + K Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTK 91 >gi|225430652|ref|XP_002268184.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 216 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 + ++L+ GM+G+ I+ + K Sbjct: 61 NMWLQLDSPPFPSFQFGMAGAVCIKGVAVTK 91 >gi|146281244|ref|YP_001171397.1| endonuclease [Pseudomonas stutzeri A1501] gi|145569449|gb|ABP78555.1| endonuclease [Pseudomonas stutzeri A1501] Length = 297 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 54/292 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + A G+ + + K+L Sbjct: 38 MPEGPSIVILREEVA-AFTGQRIERAE--------GSAKVDMARLTGQVVREFRSWGKHL 88 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE ++S+ +HL + GS+ I A +SL + Sbjct: 89 LIELE-DVSVRIHLLLFGSYRINERKDATA---------RLSLGFANGELNFYACSV--- 135 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGI 180 L+E L Y L + L + +ALL+Q + AG Sbjct: 136 -----QLIEGPLDATYDWSMDLMSDAWSPRGTLKRLRERPRLLAC---DALLDQTLFAGS 187 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI E L+R ++ P+ L P L +L++E + ++ Sbjct: 188 GNIIKNEVLYRIRVHPLSLIGEL------PPAKLRELVREARTYSFQFLE---------- 231 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---TFYCTYCQK 289 G + + +GKT C+ C + + + GRS F+C CQK Sbjct: 232 --WKRAGVLKANWLAHGKT--TCV-RCRIPLMKAKELGRSRRRAFFCERCQK 278 >gi|296472464|gb|DAA14579.1| endonuclease VIII-like 3 [Bos taurus] Length = 606 Score = 99.2 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 89/255 (34%), Gaps = 39/255 (15%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 F G V K L + G ++ +H GM GS +I Sbjct: 64 QDFLRLFNGHGYSGVETLGKELFMYF-GPKALRIHFGMKGSLVINPLESKNKNG------ 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +S K + + D +++ T + + + L + F+ Sbjct: 117 --VSPVFEVQLTKDLICFFDSS----VEIRNSTESQQRIRVMEEL--DVCSPRFSFSRAE 168 Query: 158 HQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + K K L + L++QK++ G+GNI EAL+ + P K L L K Sbjct: 169 SEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIH---HLVK 225 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIRRI 274 +I+ + G + + Y VY + G+ C C + R+ Sbjct: 226 MIRNFSILFYRCCKVGSALSKHY--------------KVYKRPNCGQCC---CKITVCRL 268 Query: 275 VQAGRSTFYCTYCQK 289 + R T++C +CQK Sbjct: 269 GENNRMTYFCPHCQK 283 >gi|77735931|ref|NP_001029662.1| endonuclease 8-like 3 [Bos taurus] gi|114152087|sp|Q3MHN7|NEIL3_BOVIN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 gi|75775280|gb|AAI05169.1| Nei endonuclease VIII-like 3 (E. coli) [Bos taurus] Length = 606 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 90/255 (35%), Gaps = 39/255 (15%) Query: 39 HHFSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH 98 H F G V K L + G ++ +H GM GS +I Sbjct: 64 HDFLRLFNGHGYSGVETLGKELFMYF-GPKALRIHFGMKGSLVINPLESKNKNG------ 116 Query: 99 VTISLTNNTNTKKYRVIYNDPRRFGFMDLVE-TSLKYQYPPLRTLGPEPADNSFNAIYLT 157 +S K + + D +++ T + + + L + F+ Sbjct: 117 --VSPVFEVQLTKDLICFFDSS----VEIRNSTESQQRIRVMEEL--DVCSPRFSFSRAE 168 Query: 158 HQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 + K K L + L++QK++ G+GNI EAL+ + P K L L K Sbjct: 169 SEVKKQKGRMLCDVLMDQKVLPGVGNIIKNEALFDSGFHPSVKVCQLTDEQIH---HLVK 225 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT--GEPCLSNCGQMIRRI 274 +I+ + G + + Y VY + G+ C C + R+ Sbjct: 226 MIRNFSILFYRCCKVGSALSKHY--------------KVYKRPNCGQCC---CKITVCRL 268 Query: 275 VQAGRSTFYCTYCQK 289 + R T++C +CQK Sbjct: 269 GENNRMTYFCPHCQK 283 >gi|224049764|ref|XP_002188348.1| PREDICTED: similar to Endonuclease VIII-like 3 [Taeniopygia guttata] Length = 652 Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 37/248 (14%) Query: 45 TRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLT 104 G V K L + + ++ +H GM+GS I K+ + + Sbjct: 123 LVGHVYRGVETLGKELFMYFDQ-KALRIHFGMNGSMHINPDGS----KDRNGAQPILEIQ 177 Query: 105 NNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-K 163 +T + + + R + + + +L + F+ ++ + Sbjct: 178 LMEDTVCFWDVTVEYRNAAEC-------EQKVRMMESL--DVCSPKFSFSRAENEIKQQS 228 Query: 164 NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQK 223 L + LL+Q ++ G+GNI EAL+ + L P K L + + L++ + Sbjct: 229 TRMLCDVLLDQTVLPGVGNIIKNEALFDSGLHPALKVCQLRD------EHIRHLVKMTRD 282 Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRST 281 + + Y H + VY + P C I R T Sbjct: 283 FTLLFYKCRKTGSPLYRH-----------YKVYKR---PACRECSGSITVCRLGDHNRMT 328 Query: 282 FYCTYCQK 289 ++C+ CQK Sbjct: 329 YFCSRCQK 336 >gi|325914892|ref|ZP_08177226.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325916329|ref|ZP_08178607.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325537500|gb|EGD09218.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] gi|325538895|gb|EGD10557.1| formamidopyrimidine-DNA glycosylase [Xanthomonas vesicatoria ATCC 35937] Length = 275 Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 101/293 (34%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TAAFVGRKILHVGGNSKQAI--------ARLHQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE S+ +H + GS+ I KP P +++ + Y Sbjct: 77 LIEC-AQFSVRIHFLLFGSYRINED---KPNAVP---RLSLEFSKGERLNFYACSVQ--- 126 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 +E L Y + + ++A + L ALL+Q I AG Sbjct: 127 ------FIERPLDEVYDWTA----DVMNPLWDAAQARRKLRAAPGMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P + +L P L +L+ + ++ D Sbjct: 177 VGNIIKNEVLHRIRVHPESEVGAL------PARKLGELVTQAREYSFDFY---------- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 221 --TWKKAFVLKKHYQVHTKTSCP---RDGTPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|327479401|gb|AEA82711.1| endonuclease [Pseudomonas stutzeri DSM 4166] Length = 260 Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 106/293 (36%), Gaps = 56/293 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + A G+ + + K+L Sbjct: 1 MPEGPSIVILREEVA-AFTGQRIERAE--------GSAKVDKARLTGQVVREFRSWGKHL 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIELE ++S+ +HL + GS+ I + P +++ + + Sbjct: 52 LIELE-DVSVRIHLLLFGSYRINERKDSTP-------RLSVGFADGELNFYACSV----- 98 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK-NALLNQKIVAG 179 L+E L Y + +++ + + L +ALL+Q + AG Sbjct: 99 -----QLIEGPLDAAYDWSM----DVMSATWSPRGTLKRLREHPRLLACDALLDQTLFAG 149 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 GNI E L+R ++ P+ L P L +L++E + ++ Sbjct: 150 SGNIIKNEVLYRIRVHPLSLIGEL------PPAKLRELVREARTYSFQFLE--------- 194 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRS---TFYCTYCQK 289 G + + +GK C+ C + + + GRS F+C CQK Sbjct: 195 ---WKRAGVLKANWLAHGKN--TCV-RCRIPLMKAKELGRSRRRAFFCERCQK 241 >gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864] Length = 985 Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPE+E R L++ + V + + L FD P F+ G+ + DV R K Sbjct: 1 MPELPELERARNFLLLTCRGKKVVQVSVDEDTLVFDGVAPQQFAQQFVGRTVRDVKRHGK 60 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKN 93 ++ IE +G H G++G+F + + K K Sbjct: 61 HIWIEFDGGSDAAFHFGLTGNFFFKSQTSGKVFKA 95 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 77/198 (38%), Gaps = 25/198 (12%) Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 P+ + S + + R+ + + R G + + S + PP+ LG +P Sbjct: 169 WPPKDSKCEFSFDD-----QSRLSFTNTCRLGRIRALADS--WAEPPICFLGFDPLTP-V 220 Query: 152 NAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPK 211 ++N +K LL+Q +AG+GN E L++A + P + T +L Sbjct: 221 EQGAFNAALVRRNVPIKALLLDQSFLAGVGNWVADEVLYQAGIHPEQYTNTLSGEQ---- 276 Query: 212 DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI 271 L L+ +IQ S +R V ++ + + + + + + G+ + Sbjct: 277 --LAALLDKIQ-----------SVVRIAVQLNADPSKYPSDWLYHHRFSKDDQVIGGEKL 323 Query: 272 RRIVQAGRSTFYCTYCQK 289 + GR++ QK Sbjct: 324 SFVAVGGRTSALLPSRQK 341 >gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] Length = 683 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 84/214 (39%), Gaps = 45/214 (21%) Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNA 153 P+ T + N + Y DPRRFG + LV + + LG +P+ Sbjct: 2 PRFAKPTFAFDNG-----IELAYVDPRRFGKIKLVRDVKEV----IGGLGVDPSKALPEG 52 Query: 154 IYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC------------------EALWRAKLS 195 + ++++ +K AL++QKI+AGIGN E L+RA++ Sbjct: 53 DAFAAMWKRRSAPIKTALMDQKIMAGIGNWMADGMFERTRTDDAIASLRSTEILYRARVH 112 Query: 196 PIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSV 255 P + + + ++ I++ +++ + ++ D+ F + + Sbjct: 113 PETRANEMTDSQ----------LEAIRERILEVVTVACAANSDH-------DLFPSDWLF 155 Query: 256 YGKTGEP-CLSNCGQMIRRIVQAGRSTFYCTYCQ 288 + + G+ G I+ I GR+T Y Q Sbjct: 156 HQRWGKTDGAKVNGDAIKFIEVGGRTTAYVPKLQ 189 >gi|289664048|ref|ZP_06485629.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 275 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 99/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TEAFVGRKILRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE N S+ +H + GS+ I KP P + + + Y Sbjct: 77 LIEC-ANFSVRIHFLLFGSYRINED---KPNAVP---RLCLEFSKGQRLNFYACSVQ--- 126 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKN-ALLNQKIVAG 179 +E L Y + + ++A + L ALL+Q I AG Sbjct: 127 ------FIERPLDEVYDWTA----DVMNPLWDAAQARRKLRAMPGMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 177 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 221 --TWKKAFVLKKHYQVHTKTSCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|213586785|ref|ZP_03368611.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 131 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 16/147 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L L++ H + G + + T I K ++Y+ Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVIDTGEIPQT-------TRILRVRLQTADKIILLYSASD 108 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPA 147 ++++ +P L+ +GP+ Sbjct: 109 ----IEMLTAEQLMTHPFLQRVGPDVL 131 >gi|755066|gb|AAA91094.1| formamidopyrimidine-DNA glycosylase [Sinorhizobium meliloti] Length = 70 Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 1/69 (1%) Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRS 280 + V+ DAI AGGSSL+D++ DGS+GYFQ++FSVY + GE C C + RIVQAGRS Sbjct: 2 RAVIADAIAAGGSSLKDHIQADGSLGYFQHSFSVYDREGEACRTPGCHGTVARIVQAGRS 61 Query: 281 TFYCTYCQK 289 TFYC +CQK Sbjct: 62 TFYCPHCQK 70 >gi|19353217|gb|AAH24921.1| Nei like 3 (E. coli) [Mus musculus] Length = 606 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 84/249 (33%), Gaps = 43/249 (17%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G+ ++ +H GM GS +I V Sbjct: 71 GYVYSGVETLGKELFMYF-GHRALRIHFGMKGSILINPREGENRGGASPALAV------- 122 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NS 165 + + + D + + L P F+ + K+ + Sbjct: 123 -QLTRDLICFYDSSVELRNSVESQQRVREMEELDICSP-----KFSFSRAESEVKKQGDR 176 Query: 166 NLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVL 225 L + LL+Q+++ G+GNI EAL+ + L P K L L K+ ++ + Sbjct: 177 MLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLSDKQAR---HLVKMTRDFSILF 233 Query: 226 IDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRS 280 AG + + VY + NCGQ + R + R Sbjct: 234 YRCCKAGSAISK--------------HCKVYKR------PNCGQCHSKITVCRFGENSRM 273 Query: 281 TFYCTYCQK 289 T++C +CQK Sbjct: 274 TYFCPHCQK 282 >gi|253317167|ref|ZP_04840380.1| formamidopyrimidine-DNA glycosylase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 96 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRK-----------NLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + + N + + K ++ F + G Sbjct: 1 MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT 60 Query: 50 IIDVSRRAKYLLIELEG---NLSIIVHLGMSGSFII 82 I +V RR+KY++ +L+ ++I HLGM+G F + Sbjct: 61 ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFSL 96 >gi|332255198|ref|XP_003276719.1| PREDICTED: endonuclease 8-like 3 [Nomascus leucogenys] Length = 606 Score = 96.5 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 93/250 (37%), Gaps = 45/250 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM GS +I KN + + LT Sbjct: 71 GYVYSGVETLGKELFMYF-GPKALRIHFGMKGSIMI--NPLEYKYKNGASPVLEVQLT-- 125 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 K + + D ++L + Q ++ L + F+ + + K K Sbjct: 126 ----KDLICFFDSS----VELRNSVESQQRIRMMKEL--DVCSPEFSFLRAESELKKQKG 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ + Sbjct: 176 RMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVFQLTDEQTH---HLVKMIRDFSIL 232 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGR 279 AG + + Y VY + NCGQ + R R Sbjct: 233 FYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRVTVCRFGDNNR 272 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 273 MTYFCPHCQK 282 >gi|312890269|ref|ZP_07749808.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Mucilaginibacter paludis DSM 18603] gi|311297249|gb|EFQ74379.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Mucilaginibacter paludis DSM 18603] Length = 244 Score = 96.5 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 98/290 (33%), Gaps = 54/290 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + +I + L+ K TV + L + G+ I D K Sbjct: 1 MPEGPSI-VILKELVQPFKGKTVEKAAGNSTKLD-------TGKLAGQTITDFKSWGKNF 52 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 I + SI +HL + GS+ I + +SL + + + Sbjct: 53 FICFDQ-FSIRIHLMLFGSYRINEHKDSPA---------RLSLQFDDGELNFYTCIAELI 102 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFN-AIYLTHQFHKKNSNLKNALLNQKIVAG 179 DL + S + + +++ A L+ + N +AL++Q + AG Sbjct: 103 EQPLDDLYDWSA------------DIMNPAWDVAKALSKMKAQPNMLACDALMDQHLFAG 150 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L+R +L P L + P + L ++ QE + + Sbjct: 151 VGNIIKNEVLFRIRLHP------LSKLGKIPDEKLEEMAQEAAIYGFE-----------F 193 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYC 287 + ++ + T + C + R FYC C Sbjct: 194 LKWKKEFTLKKHWLA---HTKKIC-PRDDVPFIKDKLGKSNRRCFYCEVC 239 >gi|108761725|ref|YP_633136.1| formamidopyrimidine DNA-glyxosylase [Myxococcus xanthus DK 1622] gi|108465605|gb|ABF90790.1| formamidopyrimidine-DNA glycosylase H2TH domain protein [Myxococcus xanthus DK 1622] Length = 153 Score = 96.5 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 13/117 (11%) Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDA 231 L Q +V +GN E+LW+A ++P R SL + D + + +D Sbjct: 35 LRQAVV--VGNRDADESLWQAGIAPRRLASSLTADEVVRLD----------RAIQAVLDE 82 Query: 232 GGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 G + G G ++ +V+G+ G PC C + GR+T++C+ CQ Sbjct: 83 GLRMRGTQRDLFGVQGQAKHRRNVFGRAGAPC-PRCATPVSHQRIGGRNTYWCSSCQ 138 >gi|109076256|ref|XP_001090459.1| PREDICTED: nei endonuclease VIII-like 3 [Macaca mulatta] Length = 602 Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 91/254 (35%), Gaps = 53/254 (20%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSC-----AKPIKNPQHNHVTI 101 G V K L + G + +H GM GS +I C A P+ Q I Sbjct: 67 GYVYSGVETLGKELFMYF-GPKAFRIHFGMKGSIMINPLECKYKNGASPVLEVQLTKDLI 125 Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 +++ + R RR G M + L + F+ + ++ Sbjct: 126 CFFDSS--VELRNSMESQRRVGMM--------------KEL--DVCSPEFSFLRAENEVK 167 Query: 162 K-KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 K K L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ Sbjct: 168 KQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTH---HLVKMIRD 224 Query: 221 IQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIV 275 + AG + + Y VY + NCGQ + R Sbjct: 225 FSILFYRCRKAGLAVSKHY--------------KVYKR------PNCGQCHCRITVCRFG 264 Query: 276 QAGRSTFYCTYCQK 289 R T++C CQK Sbjct: 265 DNNRMTYFCPRCQK 278 >gi|213864695|ref|ZP_03386814.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 69 Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRST 281 + VL+ +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+T Sbjct: 3 KAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRAT 61 Query: 282 FYCTYCQK 289 FYC CQK Sbjct: 62 FYCRQCQK 69 >gi|302393810|sp|Q8TAT5|NEIL3_HUMAN RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase FPG2; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 Length = 605 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 47/287 (16%) Query: 12 RNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 R+L + + + + L D + + G V K L + G + Sbjct: 33 RSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYF-GPKA 91 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + +H GM G I KN + + LT K + + D ++L Sbjct: 92 LRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT------KDLICFFDSS----VELRN 139 Query: 130 TSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCE 187 + Q ++ L + F+ + + K K L + L++Q ++ G+GNI E Sbjct: 140 SMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNE 197 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+ + L P K L L K+I++ + AG + + Y Sbjct: 198 ALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSILFYRCRKAGLALSKHY-------- 246 Query: 248 YFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQK 289 VY + NCGQ + R R T++C +CQK Sbjct: 247 ------KVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|157388969|ref|NP_060718.2| endonuclease 8-like 3 [Homo sapiens] Length = 605 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 47/287 (16%) Query: 12 RNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 R+L + + + + L D + + G V K L + G + Sbjct: 33 RSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYF-GPKA 91 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + +H GM G I KN + + LT K + + D ++L Sbjct: 92 LRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT------KDLICFFDSS----VELRN 139 Query: 130 TSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCE 187 + Q ++ L + F+ + + K K L + L++Q ++ G+GNI E Sbjct: 140 SMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNE 197 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+ + L P K L L K+I++ + AG + + Y Sbjct: 198 ALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSILFYRCRKAGLALSKHY-------- 246 Query: 248 YFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQK 289 VY + NCGQ + R R T++C +CQK Sbjct: 247 ------KVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|22004059|dbj|BAC06479.1| hypothetical protein [Homo sapiens] gi|119625121|gb|EAX04716.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 47/287 (16%) Query: 12 RNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 R+L + + + + L D + + G V K L + G + Sbjct: 33 RSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYF-GPKA 91 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + +H GM G I KN + + LT K + + D ++L Sbjct: 92 LRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT------KDLICFFDSS----VELRN 139 Query: 130 TSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCE 187 + Q ++ L + F+ + + K K L + L++Q ++ G+GNI E Sbjct: 140 SMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNE 197 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+ + L P K L L K+I++ + AG + + Y Sbjct: 198 ALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSILFYRCRKAGLALSKHY-------- 246 Query: 248 YFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQK 289 VY + NCGQ + R R T++C +CQK Sbjct: 247 ------KVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|19684059|gb|AAH25954.1| Nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 605 Score = 96.1 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 102/287 (35%), Gaps = 47/287 (16%) Query: 12 RNLMMVMKNMTVTDICLHR--KNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLS 69 R+L + + + + L D + + G V K L + G + Sbjct: 33 RSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYF-GPKA 91 Query: 70 IIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE 129 + +H GM G I KN + + LT K + + D ++L Sbjct: 92 LRIHFGMKG--FIMINPLEYKYKNGASRVLEVQLT------KDLICFFDSS----VELRN 139 Query: 130 TSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCE 187 + Q ++ L + F+ + + K K L + L++Q ++ G+GNI E Sbjct: 140 SMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNE 197 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+ + L P K L L K+I++ + AG + + Y Sbjct: 198 ALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSILFYRCRKAGLALSKHY-------- 246 Query: 248 YFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQK 289 VY + NCGQ + R R T++C +CQK Sbjct: 247 ------KVYKR------PNCGQCHCRITVCRFGDNNRMTYFCPHCQK 281 >gi|160774311|gb|AAI55158.1| Neil3 protein [Danio rerio] Length = 568 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 91/245 (37%), Gaps = 36/245 (14%) Query: 46 RGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 +G + V K L + G ++ +H GM+GS I K P + I LTN Sbjct: 48 KGGEFTGVETLGKELFMYF-GVRALRLHFGMNGSMRINPLKKDLNGKPPV---LVIQLTN 103 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 + + + D + L E + + + L + F+ + Sbjct: 104 D------AICFFDTT--VEIRLSE-DCEQKVRAMEAL--DICSPKFSFSRAVEAVKTERA 152 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + LL+Q ++ G+GNI EAL+ + L+P K L ++ L++ + Sbjct: 153 RMLCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQ------VHHLVKMTRDF 206 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFY 283 + +GS Y + VY + C G + R+ GR T+Y Sbjct: 207 TLLFYKC---------RKNGSPLYK--HYKVYKRPN--CGQCSGTVTVCRLGDNGRMTYY 253 Query: 284 CTYCQ 288 C CQ Sbjct: 254 CQRCQ 258 >gi|14571863|gb|AAK67295.1|AF279677_1 formamidopyrimidine-DNA glycosylase [Brucella abortus] Length = 63 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL-SNCGQMIRRIVQAGRSTFYCTY 286 AI A GSSL+DY+ DG++GYFQ++FSVYG+ G+PC CG + R+VQ+GRSTF+C Sbjct: 1 AIAAEGSSLKDYIQADGALGYFQHSFSVYGREGKPCRNPACGGTVERVVQSGRSTFFCAS 60 Query: 287 CQ 288 CQ Sbjct: 61 CQ 62 >gi|55925237|ref|NP_001007336.1| endonuclease VIII-like 3 [Danio rerio] gi|55250345|gb|AAH85550.1| Nei endonuclease VIII-like 3 (E. coli) [Danio rerio] gi|182888832|gb|AAI64271.1| Neil3 protein [Danio rerio] Length = 550 Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 90/245 (36%), Gaps = 36/245 (14%) Query: 46 RGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 G + V K L + G ++ +H GM+GS I K P + I LTN Sbjct: 48 TGGEFTGVETLGKELFMYF-GVRALRLHFGMNGSMRINPLKKDLHGKPPV---LVIQLTN 103 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 + + + D + L E + + + L + F+ + Sbjct: 104 D------AICFFDTT--VEIRLSE-DCEQKVRAMEAL--DICSPKFSFSRAVEAVKTERA 152 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + LL+Q ++ G+GNI EAL+ + L+P K L ++ L++ + Sbjct: 153 RMLCDVLLDQTVLPGVGNIIKNEALFDSGLNPAVKVSQLTDEQ------VHHLVKMTRDF 206 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFY 283 + +GS Y + VY + C G + R+ GR T+Y Sbjct: 207 TLLFYKC---------RKNGSPLYK--HYKVYKRPN--CGQCSGTVTVCRLGDNGRMTYY 253 Query: 284 CTYCQ 288 C CQ Sbjct: 254 CQRCQ 258 >gi|22122759|ref|NP_666320.1| endonuclease 8-like 3 [Mus musculus] gi|56404613|sp|Q8K203|NEIL3_MOUSE RecName: Full=Endonuclease 8-like 3; AltName: Full=DNA glycosylase FPG2; AltName: Full=DNA glycosylase/AP lyase Neil3; AltName: Full=Endonuclease VIII-like 3; AltName: Full=Nei-like protein 3 gi|21961370|gb|AAH34753.1| Nei like 3 (E. coli) [Mus musculus] gi|24475412|dbj|BAC22661.1| putative DNA glycosylase [Mus musculus] gi|148703690|gb|EDL35637.1| nei like 3 (E. coli) [Mus musculus] Length = 606 Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 82/250 (32%), Gaps = 45/250 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV----TIS 102 G V K L + G ++ +H GM GS +I V + Sbjct: 71 GYVYSGVETLGKELFMYF-GPRALRIHFGMKGSILINPREGENRAGASPALAVQLTRDLI 129 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 +++ + + + R +L + F+ + K Sbjct: 130 CFYDSSVELRNSVESQQRVRVMEEL-----------------DICSPKFSFSRAESEVKK 172 Query: 163 K-NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + L + LL+Q+++ G+GNI EAL+ + L P K L L K+ ++ Sbjct: 173 QGDRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAVKVCQLSDKQA---CHLVKMTRDF 229 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GR 279 + AG + + VY + P C I R Sbjct: 230 SILFYRCCKAGSAISK--------------HCKVYKR---PNCDQCHSKITVCRFGENSR 272 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 273 MTYFCPHCQK 282 >gi|213023617|ref|ZP_03338064.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 61 Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 228 AIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYC 287 +I+ GG++L+D++ DG GYF VYG+ GEPC CG I A R+TFYC +C Sbjct: 1 SIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPC-RVCGTPIVATKHAQRATFYCRHC 59 Query: 288 QK 289 QK Sbjct: 60 QK 61 >gi|219116146|ref|XP_002178868.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409635|gb|EEC49566.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 367 Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 130/320 (40%), Gaps = 63/320 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNL-RFDFPHHFSAATRGKK-IIDVSRRAK 58 MPELPEVE R+ L+ ++ + + I + N R + GK +D+ R+ K Sbjct: 1 MPELPEVEQFRQLLLPLVSSSSPIQISAWKDNPPRVWLSEEQINSLSGKYYCVDILRKGK 60 Query: 59 YLLIELEGNLS------------IIVHLGMSGS---------FIIEHTSCAKPIKNPQHN 97 L I L+ + + + +H+GM+G + + + A P++ Sbjct: 61 QLCIVLQPSKANGQKKEPKKSVYLYLHMGMTGRISSPNRESGWGRQSSKVADIEYPPRYT 120 Query: 98 HVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA---DNSFNAI 154 ++T + T+ Y+ ++DPR+FG L + P L P+ D Sbjct: 121 YLTFA------TEHYQAAFSDPRKFGKAVLSD-----NLDPFGLLAPDALNCNDEKLIRN 169 Query: 155 YLTHQFHKKNSNLKNALLNQ-KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDI 213 + F ++ ++K LL+Q ++ +G+GN E L++ + P + + L + G+ Sbjct: 170 EIIPGFVEQTRSIKAILLDQNRVCSGVGNWVADEVLYQIGMHPDQ--QYLTEEQGS---R 224 Query: 214 LYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG----KTGEPCLSNCGQ 269 L++ +Q I + + +++ Y + Y + G+ G+ Sbjct: 225 LFETLQAIVRTAVGCLNS-------------DTKYPDSWLFGYRWTKKRAGKDAA---GR 268 Query: 270 MIRRIVQAGRSTFYCTYCQK 289 + + GR++ QK Sbjct: 269 ALTFLTSGGRTSAIVASVQK 288 >gi|62857543|ref|NP_001017201.1| nei endonuclease VIII-like 3 [Xenopus (Silurana) tropicalis] gi|89269931|emb|CAJ83732.1| novel protein containing Zn-finger in Ran binding protein and others domain and 2 GRF zinc finger domains [Xenopus (Silurana) tropicalis] Length = 574 Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 44/283 (15%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 V K +V + L + P + ++ G V K L + G +I Sbjct: 16 ARVEKGQSV--VELRGSAVSGTPPSSCYNALSSLTGCSYTGVQTLGKELFMYF-GLKAIR 72 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VH GM+GS + + + + + + D R Sbjct: 73 VHFGMNGSIRLNQAVKKGQENSRPMPVAVLEVQLEKDLICFYESTVDVRNVSEC------ 126 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALW 190 + + L L + + F+ + K K L + LL+Q I+ G+GNI EAL+ Sbjct: 127 -QEKIRFLEEL--DVCSSKFSFSRAECEIKKQKARMLCDILLDQMILPGVGNIIKNEALF 183 Query: 191 RAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 + L P + L + L K+ ++ + +G + + Y Sbjct: 184 DSGLHPGVQAGLLTDMQVS---HLVKMTRDFTLLFYKCRKSGSALYKHY----------- 229 Query: 251 NAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGRSTFYCTYCQ 288 VY + NCGQ + R+ + R T++C CQ Sbjct: 230 ---KVYKR------PNCGQCDKKITVCRLGENNRMTYFCPKCQ 263 >gi|323451022|gb|EGB06900.1| hypothetical protein AURANDRAFT_65070 [Aureococcus anophagefferens] Length = 402 Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 112/321 (34%), Gaps = 58/321 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMT--VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR--- 55 MPE PE + R + + V + + P + R + + + R Sbjct: 38 MPEGPECHTLSRAMDARLGGGRYAVAAVDVVSGRYAERPPEGLAE-LRDRLPLALERVRC 96 Query: 56 RAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI 115 + K++ EL G S+ LGMSG + + H H ++L ++ + R+ Sbjct: 97 KGKFIYFELAGGASLWSTLGMSGGWTLRAG----------HPHARLALRLASDDDEVRLW 146 Query: 116 YNDPRRFGFM------------------DLVETSLKYQY---------PPLRTLGPEPA- 147 Y+D R FG +E + + L++L P Sbjct: 147 YHDLRNFGTFKACFDAGLLRDKLESLGLSWLEDGDEAGFEQGRTRERNSKLQSLISRPFS 206 Query: 148 ---DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 ++ F ++ L L++QK AGIGN + E L+ + P + Sbjct: 207 TRFEDRFRGVFAAAAARSPEKKLAVFLMDQKQTAGIGNYLLSEILYATRTWPFAALGDVG 266 Query: 205 QNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 ++ +LI+ + + G R + +G+ + VYG Sbjct: 267 EDRVRAICGEALRLIRASRD--AQLVAYGTPDPRPKLRDLAPLGF---SLEVYG----AS 317 Query: 264 LSNCGQMIRR-IVQAGRSTFY 283 ++ G+ +RR GR+ + Sbjct: 318 VAGDGRAVRRDAGPHGRTLHW 338 >gi|196001059|ref|XP_002110397.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] gi|190586348|gb|EDV26401.1| hypothetical protein TRIADDRAFT_54344 [Trichoplax adhaerens] Length = 408 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 80/237 (33%), Gaps = 61/237 (25%) Query: 1 MPELPEVEIIRRNLMMVM-----KNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPE PEV + + + V ++ F P + I Sbjct: 1 MPEGPEVRLASDYINHICCNVIFSGQIVKSDVSKNPSITFAAPFY--------TITG-QS 51 Query: 56 RAKYLLIELEG-----------------------NLSIIVHLGMSGSFIIEHTSCAKPIK 92 R K LL+ L+ + I+ GMSGSF + + Sbjct: 52 RGKELLLTLKEADANNGNSEEMNHRVKKECDSRLEMRILFGFGMSGSFSVTDSD-----N 106 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 P+H+H+ N + + DPRRFG + + P R GP+ +F Sbjct: 107 IPKHSHLRF---YAHNKSSMVLNFVDPRRFGTWRVTN-----NWSPNR--GPDA---AFE 153 Query: 153 AIYLTHQFHKK------NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 + N + LL+QK GIGN E L+RA + P R++ Sbjct: 154 YELFCNNIASHLNASLFNKPICEVLLDQKYFNGIGNYLRAEILYRAGIPPFTMARNV 210 >gi|224542408|ref|ZP_03682947.1| hypothetical protein CATMIT_01590 [Catenibacterium mitsuokai DSM 15897] gi|224524672|gb|EEF93777.1| hypothetical protein CATMIT_01590 [Catenibacterium mitsuokai DSM 15897] Length = 167 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 31/197 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I++ + + TV + + RG++I+ + K+ Sbjct: 1 MPEGPTIVILKEEVA-AFEGRTVVRVAGNSTQDI--------QRMRGREILAIRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 L+E + S+ VHL + GS+ I A P +++ Y Sbjct: 52 LLEFS-DFSLRVHLMLYGSYRINERREAAP-------RLSLQFAGGDELNFYACSVK--- 100 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAG 179 +E L Y + + ++ + + + + +ALL+Q++ AG Sbjct: 101 ------FIEQPLDEVYDWSA----DVMNAHWDPKLARRKLKQMPQALVADALLDQEVFAG 150 Query: 180 IGNIYVCEALWRAKLSP 196 +GNI EAL R ++ P Sbjct: 151 VGNIIKNEALHRIRVHP 167 >gi|301779515|ref|XP_002925180.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease VIII-like 1-like [Ailuropoda melanoleuca] Length = 464 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 101/284 (35%), Gaps = 43/284 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + R + + + R P SA I S R K Sbjct: 71 MPEGPELHLASRFVNEACRGLVFGGCVEKSPVSRNPEVPFESSAY-----CISSSARGKE 125 Query: 60 LLIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L + L G L+++ GMSGSF + P H H+ Sbjct: 126 LRLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDAL-----PAHAHLRFYTAPPG--P 178 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQFHK-KNSNL 167 + + + D RRFG DL ++Q GP F L + K + + Sbjct: 179 RLALCFVDIRRFGRWDL---GGEWQPXXXXXXGPCVLLEYERFRENVLRNLADKVFDQPI 235 Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYKLIQEIQK 223 ALL+Q+ GIGN E L+R ++ P K R L Q +P+ L + I+ + Sbjct: 236 CEALLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLEALQQRRPSPELTLSQKIRAKLR 295 Query: 224 VLIDAIDAGGSSLRDYVHIDGS----------IGYFQNAFSVYG 257 D ++ S ++ V + G F+ YG Sbjct: 296 NP-DLLELCHSVPKEVVQLGGKGYGLESGEEDFAAFRAWLRCYG 338 >gi|83699625|gb|ABC40719.1| nei endonuclease VIII-like 3 (E. coli) [Homo sapiens] Length = 606 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 45/250 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM G I KN + + LT Sbjct: 71 GYVYSGVETLGKELFMYF-GPKALRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT-- 125 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 K + + D ++L + Q ++ L + F+ + + K K Sbjct: 126 ----KDLICFFDSS----VELRNSMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKG 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ + Sbjct: 176 RMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSIL 232 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGR 279 AG + + Y VY + NCGQ + R R Sbjct: 233 FYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRFGDNNR 272 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 273 MTYFCPHCQK 282 >gi|7023157|dbj|BAA91860.1| unnamed protein product [Homo sapiens] Length = 605 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 91/250 (36%), Gaps = 45/250 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM G I KN + + LT Sbjct: 70 GYVYSGVETLGKELFMYF-GPKALRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT-- 124 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 K + + D ++L + Q ++ L + F+ + + K K Sbjct: 125 ----KDLICFFDSS----VELRNSMESQQRIRMMKEL--DVCSPEFSFLRAESEVKKQKG 174 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ + Sbjct: 175 RMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSIL 231 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGR 279 AG + + Y VY + NCGQ + R R Sbjct: 232 FYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRFGDNNR 271 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 272 MTYFCPHCQK 281 >gi|49257706|gb|AAH74457.1| LOC443713 protein [Xenopus laevis] Length = 323 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 30/216 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNM----TVTDICLH-RKNLRFDFPH-HFSAATRGKKIIDVS 54 MPE PE+ + V K + V + ++ F P S+ +RGK++ Sbjct: 1 MPEGPELHRASLFVNKVCKGLSFAGAVEKSAVSKNTDVPFSCPEYTISSVSRGKEV---- 56 Query: 55 RRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K +L L I+ GMSGSF + P+H H+ ++ + Sbjct: 57 ---KLILTPLSDESEETHIVFRFGMSGSFKFTPQD-----QIPKHAHLRF---YTKDSPQ 105 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + DPRRFG ++ + + P + F L + + + Sbjct: 106 RVLCFVDPRRFGTWEVHGSWQPERGPCVIQ-----EYEKFRENVLKNLSDKAFDKPICEV 160 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 +LNQK GIGN E L+R ++ P RS+++ Sbjct: 161 MLNQKYFNGIGNYLRAEILFRLEIPPFTPARSVLEA 196 >gi|149692230|ref|XP_001493563.1| PREDICTED: similar to nei endonuclease VIII-like 1 (E. coli) [Equus caballus] Length = 462 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 84/239 (35%), Gaps = 24/239 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + R S+A R I S R K L Sbjct: 74 MPEGPELHLASRFVNEACGGLVFGGCVEKSPISRNPEVPFESSAYR----ISASARGKEL 129 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + P H + + Sbjct: 130 RLTLSPLPGAQPPQEPLALVFRFGMSGSFQLVPRDMLPP-------HAHLRFYTAPPGPR 182 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D RRFG DL + P + L E + F + + AL Sbjct: 183 LALCFVDIRRFGHWDLGGEWQPGRGPCVL-LEYEQFRENVLQNLADKAF---DRPICEAL 238 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 L+Q+ GIGN E L+R ++ P K R++++ + + + + + D Sbjct: 239 LDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLEALQQRRPSPALTLSQKIRAKLQNPD 297 >gi|145642431|ref|ZP_01797986.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae R3021] gi|145272869|gb|EDK12760.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.4-21] Length = 66 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 224 VLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFY 283 +L +AI GG++L+D++ DG GYF VYG +PC CG I +V R++FY Sbjct: 1 MLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFY 59 Query: 284 CTYCQK 289 C CQK Sbjct: 60 CPKCQK 65 >gi|76664749|emb|CAJ17813.1| formamidopyrimidine-DNA glycosylase [Candidatus Phytoplasma solani] Length = 98 Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+ AKL P K +L ++ +KVL AI GG+++ Y G G Sbjct: 1 VLFLAKLHPETKACTLNIQQAQT------ILTISKKVLKTAIQLGGTTISTYESQQGIQG 54 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 FQN+ V+ K C NC I +I GR T++C CQK Sbjct: 55 TFQNSLLVHSKQNYLCF-NCKTKIIKIKVGGRGTYFCPSCQK 95 >gi|114596997|ref|XP_526741.2| PREDICTED: endonuclease 8-like 3 [Pan troglodytes] Length = 606 Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 92/250 (36%), Gaps = 45/250 (18%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM G I KN + + LT Sbjct: 71 GYVYSGVETLGKELFMYF-GPKALRIHFGMKG--FIMINPLEYKYKNGASPVLEVQLT-- 125 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 K + + D ++L + Q ++ L + + F+ + + K K Sbjct: 126 ----KDLICFFDSS----VELRNSMESQQRIRMMKEL--DVCSSEFSFLRAESEVKKQKG 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + L++Q ++ G+GNI EAL+ + L P K L L K+I++ + Sbjct: 176 RMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIH---HLMKMIRDFSIL 232 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQ-----MIRRIVQAGR 279 AG + + Y VY + NCGQ + R R Sbjct: 233 FYRCRKAGLALSKHY--------------KVYKR------PNCGQCHCRITVCRFGDNNR 272 Query: 280 STFYCTYCQK 289 T++C +CQK Sbjct: 273 MTYFCPHCQK 282 >gi|146301106|ref|YP_001195697.1| formamidopyrimidine-DNA glycolase [Flavobacterium johnsoniae UW101] gi|146155524|gb|ABQ06378.1| Formamidopyrimidine-DNA glycolase [Flavobacterium johnsoniae UW101] Length = 243 Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 95/299 (31%), Gaps = 69/299 (23%) Query: 1 MPELP-------EVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDV 53 MPE P EV + ++ + + K I+ Sbjct: 1 MPEGPSILILKEEV--------QQFAGKRIIEVSGNASIDL--------ERLQDKTILSF 44 Query: 54 SRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 K+ LI + + +I +HL M G++ I P + + +N Sbjct: 45 KTWGKHFLICFD-DFTIRIHLMMFGTYRINEKKETAP-------RLHLGFSNGEIN---- 92 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALL 172 Y + V QY + + ++N K N + +A+L Sbjct: 93 -FYTCSIK------VLEGAVDQYYDWSE---DVLNENWNPKKAKISLDKIPNEKICDAIL 142 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q I +G+GNI E L+R + P + P + + +LI E + + Sbjct: 143 DQNIFSGVGNIIKNEVLYRCFVHPESLVGKI------PPEKIDELIAECSIYSFEFL--- 193 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + + Y + + C C + + R +F+CT CQ+ Sbjct: 194 ---------YWKKKFELKKHWLAYSQ--KEC-KRCSLPMIKKPTGKKKRRSFFCTNCQQ 240 >gi|164604791|gb|ABY61957.1| putative formamidopyrimidine-DNA-glycosylase [Haemophilus influenzae] Length = 65 Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 229 IDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 I GG++L+D++ DG GYF VYG +PC CG I +V R++FYC CQ Sbjct: 5 IQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPC-PTCGTKIESLVIGQRNSFYCPKCQ 63 Query: 289 K 289 K Sbjct: 64 K 64 >gi|149236155|ref|XP_001523955.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL YB-4239] gi|146452331|gb|EDK46587.1| hypothetical protein LELG_04768 [Lodderomyces elongisporus NRRL YB-4239] Length = 508 Score = 91.8 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 41/237 (17%) Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVI-YNDPRRFGFMDLVETSL------KYQYPP 138 P+ + ++L +++ + DPRR G + L+E + PP Sbjct: 146 EGETSSWPPKFTKLEMTLRQDSDHGNEEFWAFVDPRRLGRIRLLEGEEIQTDEGLLKTPP 205 Query: 139 LRTLGPE----PA--------------DNSFN--------AIYLTHQFHKKNSNLKNALL 172 L GP+ P D + + K +K+ LL Sbjct: 206 LDLQGPDYSKPPTRCLSDPSSAVFVSGDPDPDHHGRPRPSLEEFSQVVLKSKKTIKSMLL 265 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAG 232 +Q AG+GN E L+ AKL P L +LY L + + V ++ Sbjct: 266 DQARFAGVGNWVADEVLFHAKLHPE---EVLPLKIKLDSPVLYTLYKSLIHVCETSVALE 322 Query: 233 GSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 GS+ R + + + + G P + G ++ I GR++ Y QK Sbjct: 323 GSARRFPENWLMRHRWGKGR----KRDG-PHQTAEGILLDHITVGGRTSCYAPSVQK 374 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 15/90 (16%) Query: 14 LMMVMKNMTVTDICLHRKNLRFD----------FPHHFSAATRGKKIIDVSRRAKYLLIE 63 L + ++ + L L + + I+ V R KY + Sbjct: 2 LKRNVLGCKISSVDLPIDRLLWPAMKIADDPEITASSIKSKLLNSIIVSVGRHGKYFWMR 61 Query: 64 L-----EGNLSIIVHLGMSGSFIIEHTSCA 88 L E +++HLGM+G + + Sbjct: 62 LKQPKMEHTQVLLMHLGMTGRIKLCNVESE 91 >gi|134023849|gb|AAI35400.1| LOC100124806 protein [Xenopus (Silurana) tropicalis] Length = 322 Score = 91.8 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 79/216 (36%), Gaps = 30/216 (13%) Query: 1 MPELPEVEIIRRNLMM-----VMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVS 54 MPE PE+ + + ++ F+ P S+ +RGK++ Sbjct: 1 MPEGPELHLASLFVNKVCNGLHFAGAVEKSAVSKNTDVPFNCPEYTISSVSRGKEV---- 56 Query: 55 RRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K +L L II GMSGSF P + P+H H+ + Sbjct: 57 ---KLILTPLSDGSEETHIIFRFGMSGSFKFTP-----PDQIPKHAHLRFYTKDAPCHV- 107 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNA 170 + + DPRRFG + + + P + F L + + + Sbjct: 108 --LCFVDPRRFGTWVVHGSWQPERGPCVMQ-----EYEKFRENVLKNLSDNVFDKPICEV 160 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 +LNQK GIGN E L+R + P RS+++ Sbjct: 161 MLNQKYFNGIGNYLRAEILFRLAIPPFIPARSVLEA 196 >gi|255727312|ref|XP_002548582.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] gi|240134506|gb|EER34061.1| hypothetical protein CTRG_02879 [Candida tropicalis MYA-3404] Length = 286 Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 88/280 (31%), Gaps = 71/280 (25%) Query: 72 VHLGMSGSFIIEH-------------------------------TSCAKPIKNPQHNHVT 100 +H GM+G + + P+ + Sbjct: 1 MHFGMTGMVKLRNVKSHLIMMENGGDKKALKKIEDAVNEIKDEEDENENEEWPPRFSKFD 60 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLV------ETSLKYQYPPLRTLGPE--------- 145 + LT + + K + D RR G + L+ PL LGP+ Sbjct: 61 MELTKDDH--KIEFAFTDARRLGRIRLLKGEEVKTNEDLLNTAPLNALGPDYSKPEVPPK 118 Query: 146 ---PA-----------DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 P K +K+ LL+Q AG+GN E +++ Sbjct: 119 QTKPFVFGDPDPDHHGRPRLTIYEFNKLILSKKKPIKSLLLDQAFFAGVGNWVGDEIVFQ 178 Query: 192 AKLSPIRKTRSLIQNNGTPK--DILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYF 249 A++ P + I N+G+ ++ KL + V +A+ G + + + + Sbjct: 179 ARIHPNEVISNKIANDGSDDIHPVVQKLYDSLISVCEEAVLVEGDTSKFPKNWLMLYRWG 238 Query: 250 QNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G+ + G + + GR++ YC QK Sbjct: 239 K------GRKEKRKTPQ-GYSLDHVTVGGRTSCYCPDLQK 271 >gi|296195124|ref|XP_002745242.1| PREDICTED: endonuclease VIII-like 3 [Callithrix jacchus] Length = 606 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 90/247 (36%), Gaps = 39/247 (15%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G V K L + G ++ +H GM G +I KN + + LT Sbjct: 71 GYVYDGVETLGKELFMYF-GPKALRIHFGMKGCVMI--NPLEYKYKNGASPVLEMQLT-- 125 Query: 107 TNTKKYRVIYNDPRRFGFMDLVETSLKYQ-YPPLRTLGPEPADNSFNAIYLTHQFHK-KN 164 K + + D ++L + Q ++ L + +F+ + + K K Sbjct: 126 ----KDLICFFDSS----VELRNSMESQQRIRMMKEL--DVCSPTFSFLRAESEVKKQKG 175 Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKV 224 L + L++Q + G+GNI EAL+ + L P K L L K+I++ + Sbjct: 176 RMLGDVLMDQSVFPGVGNIIKNEALFDSALHPAVKVCQLTDGQIH---HLVKMIRDFSIL 232 Query: 225 LIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTF 282 AG + + F VY ++ C C I R T+ Sbjct: 233 FYRCRKAGLAVSK--------------HFKVYKRSN--CG-QCHGRITVCRFGDNNRMTY 275 Query: 283 YCTYCQK 289 +C +CQK Sbjct: 276 FCPHCQK 282 >gi|294658546|ref|XP_460888.2| DEHA2F12034p [Debaryomyces hansenii CBS767] gi|202953211|emb|CAG89238.2| DEHA2F12034p [Debaryomyces hansenii] Length = 426 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 46/237 (19%) Query: 86 SCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVE------TSLKYQYPPL 139 + P+ V + T +++ + + DPRR G + + + + PL Sbjct: 175 EPDEEEWPPRF--VKFEMELQTENERFDLAFVDPRRLGKVRFLSGPLVQSDNDLMKQDPL 232 Query: 140 RTLGPE---PA----------DNSFN--------AIYLTHQFHKKNSNLKNALLNQKIVA 178 LGP+ P D + K +K+ LL Q+ A Sbjct: 233 SALGPDYSKPLEISRTEFTTGDPDPDNHGKCRLSLEEFNKLILSKKKPIKSLLLEQEFFA 292 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GN E ++ A++ P S I + I+ +L + V + Sbjct: 293 GVGNWVGDEIIYHARIHPNEVLSSKIPKGDSVDSIIERLYNSLLYVCELS---------- 342 Query: 239 YVHIDGSIGYFQ-NAFSVY----GKTGEPCLSNC-GQMIRRIVQAGRSTFYCTYCQK 289 V ++G + F N +Y + P G + + GR++ + QK Sbjct: 343 -VRVEGDVSQFPSNWLMIYRWGKRRKNSPKPKTDEGYEVDHVTVGGRTSCFVPKLQK 398 Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 17/101 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP----------HHFSAATRGKKI 50 MPE+ EV + + + ++ + ++ L F F + G + Sbjct: 1 MPEVAEVAHVCALMRRNLLGFRISKVKMNNDPLLFPFLKNNPNAEQELADLQSKLTGSTV 60 Query: 51 IDVSRRAKYLLIEL-------EGNLSIIVHLGMSGSFIIEH 84 V R KY + L + +++H GM+G I + Sbjct: 61 KSVGRHGKYFWLRLSLNKESKDETGVLLMHFGMTGMIKIRN 101 >gi|297296933|ref|XP_002804926.1| PREDICTED: endonuclease VIII-like 1-like [Macaca mulatta] Length = 346 Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAHPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PQ 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDVRRFGHWDLGGKWQPGRGPCVLQ-----EYEQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK-------------- 216 LL+Q+ GIGN E L+R K+ P K RS+++ + L Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSLKLTLSQKIKAKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 264 >gi|170671944|ref|NP_001116270.1| nei endonuclease VIII-like 1 [Xenopus (Silurana) tropicalis] gi|170285164|gb|AAI61437.1| LOC100124806 protein [Xenopus (Silurana) tropicalis] Length = 434 Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 80/216 (37%), Gaps = 30/216 (13%) Query: 1 MPELPEVEIIRRNLMM-----VMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVS 54 MPE PE+ + + ++ F+ P S+ +RGK++ Sbjct: 1 MPEGPELHLASLFVNKVCNGLHFAGAVEKSAVSKNTDVPFNCPEYTISSVSRGKEV---- 56 Query: 55 RRAKYLLIELEGN---LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 K +L L II GMSGSF P + P+H H+ + Sbjct: 57 ---KLILTPLSDGSEETHIIFRFGMSGSFKFTP-----PDQIPKHAHLRFYTKDAPCHV- 107 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNA 170 + + DPRRFG + + + P + F L + K + + Sbjct: 108 --LSFVDPRRFGTWVVHGSWQPERGPCVMQ-----EYEKFRENVLKNLSDKVFDKPICEV 160 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 +LNQK GIGN E L+R + P RS+++ Sbjct: 161 MLNQKYFNGIGNYLRAEILFRLAIPPFIPARSVLEA 196 >gi|224535568|ref|ZP_03676107.1| hypothetical protein BACCELL_00432 [Bacteroides cellulosilyticus DSM 14838] gi|224522821|gb|EEF91926.1| hypothetical protein BACCELL_00432 [Bacteroides cellulosilyticus DSM 14838] Length = 173 Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 12/146 (8%) Query: 146 PADNSFNAIYLTHQFH--KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSL 203 P +++ F KK K L ++ + G+GN + L+ A + P +K L Sbjct: 34 PLSDAYTEAEFEKLFASAKKTLTAKALLATEQRIPGVGNGVTQDILFNAGIHPKQKVIDL 93 Query: 204 IQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 K +L+K +++ + G + G+ G ++ S KT + Sbjct: 94 SDGQ---KGVLFKSLKDTLMAMTS-----GRGRDTQTDLYGNEGGYKTILS--SKTWKNP 143 Query: 264 LSNCGQMIRRIVQAGRSTFYCTYCQK 289 CG +I + G S +YC CQK Sbjct: 144 CPRCGSVIVKEAYLGGSVYYCPECQK 169 >gi|224048925|ref|XP_002186869.1| PREDICTED: nei like 2 (E. coli) [Taeniopygia guttata] Length = 290 Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 91/321 (28%), Gaps = 79/321 (24%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P +R+ L V + + L + + + ++ K Sbjct: 1 MPEGP---SVRKFQLLTSPFVGQVVAKVGGSSRKLSVNDLNAL--RLQDSQV-----HGK 50 Query: 59 YLLIEL-------------------------EGNLSIIVHLGMSGSFII-EHTSCAKPIK 92 L + + +H GM GS E + ++ K Sbjct: 51 NLYLAFVAAEGPDEELQEAQHSKSEAPEAAEGQGNWLRIHFGMFGSVRANEFSRASRANK 110 Query: 93 NPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFN 152 L + + + V YN ++ S P + F+ Sbjct: 111 RGDWKDPVPRLVLHFESGGFLVFYN-------CRMLWCSSPRADPAS-----DILSVEFH 158 Query: 153 AIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKD 212 LLNQ+ +G+GNI E L+ A++ P+ L +++ Sbjct: 159 RGRALRALCAPEPVCYT-LLNQRYFSGLGNIIKNEILYLARIHPLTPGSLLARSD----- 212 Query: 213 ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR 272 L +L+ + + + + VY K P G + Sbjct: 213 -LERLLDCAVQFSSEWL-------------HNKLRGHGLHPQVYQKEQCP----QGHPLM 254 Query: 273 RIVQA-----GRSTFYCTYCQ 288 + R T++C CQ Sbjct: 255 KGTFGPLGGFKRLTWWCPQCQ 275 >gi|255532507|ref|YP_003092879.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Pedobacter heparinus DSM 2366] gi|255345491|gb|ACU04817.1| DNA glycosylase/AP lyase, H2TH DNA-binding [Pedobacter heparinus DSM 2366] Length = 244 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 56/292 (19%) Query: 1 MPELPEVEIIRRNLMMV-MKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE P + I+R + + ++ V + + K + K+ K+ Sbjct: 1 MPEGPSIVILRELIEELDLEGQEVIALSGNTKIEK--------DRMLHHKVKAFKSWGKH 52 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNT-NTKKYRVIYND 118 LI E N S+ +H M G++ I +++S N N + Y + Sbjct: 53 FLICFE-NFSLRIHFMMFGTYRINERKQTPA-------RLSLSFENAELNFYTCSLKYVE 104 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178 D + Q+ +P + + + LL+Q+I + Sbjct: 105 GDVNVNYDWSSDIMAEQW--------DPKKALKKMKTKSQAL------ICDLLLDQEIFS 150 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNI E L+R + P + P L LI E ++ D Sbjct: 151 GLGNIIKNEVLYRVGIHPS------SVIDSIPVAKLKLLITEARQYSF-----------D 193 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQ 288 +++ + ++ V + + C + + R TF+C CQ Sbjct: 194 FLNWKKAHVLKKHWL-VNTR--QFCPLK--HPLIKSYLGKTKRRTFFCPVCQ 240 >gi|74001005|ref|XP_854395.1| PREDICTED: similar to Endonuclease VIII-like 1 (Nei-like 1) (DNA glycosylase/AP lyase Neil1) (DNA-(apurinic or apyrimidinic site) lyase Neil1) (NEH1) (FPG1) [Canis familiaris] Length = 389 Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 93/280 (33%), Gaps = 39/280 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASRFVNAACAGLVFGGAVETSRCSRGPAVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GM+GSF + P H H+ + Sbjct: 57 RLALRPLPGALPAREPLALVFRFGMTGSFRLAPRDA-----LPAHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNAL 171 + + D RRFG L + P + L E + F + AL Sbjct: 110 LALCFVDARRFGRWHLGGDWQPGRGPCVL-LEYERFRENVLRNLAHKAF---EQPICEAL 165 Query: 172 LNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYK----------L 217 L+Q+ GIGN E L R + P K R+ L Q +P+ L + L Sbjct: 166 LDQRFFNGIGNYLRAEILHRLGIPPFEKARTVLEALQQRRPSPEQTLSQKIRAKLQSPDL 225 Query: 218 IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 ++ V + + GG + F+ YG Sbjct: 226 LELCHSVPKEVVQLGGKGY-GPESGEEDFAAFRAWLRCYG 264 >gi|300777160|ref|ZP_07087018.1| probable DNA-formamidopyrimidine glycosylase [Chryseobacterium gleum ATCC 35910] gi|300502670|gb|EFK33810.1| probable DNA-formamidopyrimidine glycosylase [Chryseobacterium gleum ATCC 35910] Length = 244 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 59/295 (20%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAAT-RGKKIIDVSRRAK- 58 MPE P + +++ NL VT++ + K F + G+ + ++ K Sbjct: 1 MPEGPSIILMKENLQPF-AGQQVTEVSGNAK---------FEKDSFIGQTLREIRTFGKQ 50 Query: 59 -YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYN 117 YL+ E ++ +HL M GS+ I+ + K + + + + Y Sbjct: 51 TYLIFE---KAAVRIHLLMFGSYGIDEQT-----KPDKSLRLALFFPTGSIY-----FYT 97 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKI 176 + ++ + T + + +N + + +AL+NQ I Sbjct: 98 CSVKSVDLEFLSTIDWEA---------DVMSDQWNPKKAEEKLKSNPKMMVCDALMNQDI 148 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +G+GNI E L+R + P +L P +LI E + D + Sbjct: 149 FSGVGNIIKNEVLFRIGVQPESLLGNL------PAKKRKELIAEARNYSFDFLKW----K 198 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQM-IRRIV-QAGRSTFYCTYCQK 289 RD+V + + V+ K+ P CG+ I++ R +F+C QK Sbjct: 199 RDFV--------LKKHWLVHTKSVCP---VCGRKLIKKQTGVGKRRSFFCEKDQK 242 >gi|325928899|ref|ZP_08190061.1| formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] gi|325540695|gb|EGD12275.1| formamidopyrimidine-DNA glycosylase [Xanthomonas perforans 91-118] Length = 250 Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 98/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S+ +H + GS+ I KP P + + +N Y Sbjct: 52 LIEF-AHFSVRIHFLLFGSYRINED---KPNAVP---RLCLEFSNGQRLNFYACSVQ--- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL-NQKIVAG 179 +E L Y + + ++ + + L L +Q I AG Sbjct: 102 ------FIERPLDEVYDWTA----DVMNPLWDPAQARRKLRAAPALLAADALLDQTIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 152 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 195 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 196 --TWKKAFVLKKHYQVHTKTSCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|292492013|ref|YP_003527452.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] gi|291580608|gb|ADE15065.1| Formamidopyrimidine-DNA glycosylase catalytic domain protein [Nitrosococcus halophilus Nc4] Length = 110 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFP-HHFSAATRGKKIIDVSRRAKY 59 MPELP+VE +R L + T+ + + L D H +++ + R KY Sbjct: 1 MPELPDVETFKRYLDATALHQTIDSVSVKATVLLKDLSIRHLQHCLEKRQLKETQRHGKY 60 Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNP 94 L + L+ +++H GM+G P Sbjct: 61 LFVSLDDGDWLVLHFGMTGYLQYFKHRKDSPPDTG 95 >gi|224000619|ref|XP_002289982.1| glycosylase [Thalassiosira pseudonana CCMP1335] gi|220975190|gb|EED93519.1| glycosylase [Thalassiosira pseudonana CCMP1335] Length = 447 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 92/278 (33%), Gaps = 73/278 (26%) Query: 42 SAATRGKKIIDVSRRAKYLLIELEG----NLSIIVHLGMSGSFIIEHT----------SC 87 + + + + K L + + + +H GM+GS S Sbjct: 48 AQELSEQTLTEAFTVGKELFLVFSDTNEKDNVLRLHFGMNGSLNARRAYTNKSNQKKASG 107 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 A P K + + + T Y+ + D R L + Sbjct: 108 AAPWKQNKTPCLRLYFTE----VNYKTVSADAARDKLFRLNSRDVCSAL----------- 152 Query: 148 DNSFNAIYLTHQFH--KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 FNA ++ ++ +ALLNQ I G+GNI E+L R+ + P + +L Sbjct: 153 ---FNAQDAFTSLRQAGQHMSISDALLNQDIFPGVGNIIKIESLHRSLVDPRKIVNTLSD 209 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 L ++++ +K +D ++ G + + VY +T C + Sbjct: 210 QE------LRRIVRHTRKFSMDWLNTGRAGTK----------------LVYNQT--VCGT 245 Query: 266 NCGQMIRRIVQAG---------------RSTFYCTYCQ 288 G ++ G R TF+CT CQ Sbjct: 246 CGGMTVKMQKIGGGGDRNTSGNGQAFMSRVTFWCTACQ 283 >gi|281343397|gb|EFB18981.1| hypothetical protein PANDA_014616 [Ailuropoda melanoleuca] Length = 384 Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 101/283 (35%), Gaps = 51/283 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD-FPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + R + + + R P SA I S R K Sbjct: 1 MPEGPELHLASRFVNEACRGLVFGGCVEKSPVSRNPEVPFESSAY-----CISSSARGKE 55 Query: 60 LLIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 L + L G L+++ GMSGSF + P H H+ Sbjct: 56 LRLTLSPLPGAQPPRGPLALVFRFGMSGSFQLAAQDAL-----PAHAHLRFYTAPPG--P 108 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQ--YPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLK 168 + + + D RRFG DL +L Q Y P + AD F+ + Sbjct: 109 RLALCFVDIRRFGRWDLGGEALPPQCQYSPRENVLRNLADKVFD------------QPIC 156 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYKLIQEIQKV 224 ALL+Q+ GIGN E L+R ++ P K R L Q +P+ L + I+ + Sbjct: 157 EALLDQRFFNGIGNYLRAEILYRLRIPPFEKARKVLEALQQRRPSPELTLSQKIRAKLRN 216 Query: 225 LIDAIDAGGSSLRDYVHIDGS----------IGYFQNAFSVYG 257 D ++ S ++ V + G F+ YG Sbjct: 217 P-DLLELCHSVPKEVVQLGGKGYGLESGEEDFAAFRAWLRCYG 258 >gi|147828418|emb|CAN77708.1| hypothetical protein VITISV_037394 [Vitis vinifera] Length = 758 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 2/76 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF--PHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + +T + + D P F A+ GK I+ R+ K Sbjct: 1 MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60 Query: 59 YLLIELEGNLSIIVHL 74 + ++L+ Sbjct: 61 NMWLQLDSPPFPSFQF 76 >gi|330944162|gb|EGH46279.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Pseudomonas syringae pv. pisi str. 1704B] Length = 58 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE RR + ++ V+ + + LR+ P G++I+ V RRAK Sbjct: 1 MPELPEVETTRRGIAPHLEGQRVSRVIVRDSRLRWPIPEDLDVRLSGQRIVQVDRRAK 58 >gi|12850615|dbj|BAB28790.1| unnamed protein product [Mus musculus] Length = 354 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 93/283 (32%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + K + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYH----ISALARGKEL 56 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L LS++ GMSGSF + P+H H+ + Sbjct: 57 RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAHLRFY--TAPPAPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG D ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK---------- 216 ALL+Q+ GIGN E L+R K+ P K R++++ P L Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQCRPSPELTLSQKIKAKLQN 222 Query: 217 --LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 L++ V + + GG + F+ YG Sbjct: 223 PDLLELCHLVPKEVVQLGGKGY-GPERGEEDFAAFRAWLRCYG 264 >gi|21241377|ref|NP_640959.1| endonuclease [Xanthomonas axonopodis pv. citri str. 306] gi|21106708|gb|AAM35495.1| endonuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 250 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 98/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 1 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S+ +H + GS+ I KP P + + + Y Sbjct: 52 LIEF-AHFSVRIHFLLFGSYRINED---KPNAVP---RLCLEFSKGQRLNFYACSVQ--- 101 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL-NQKIVAG 179 +E L Y + + ++A + + L L +Q I AG Sbjct: 102 ------FIERPLDEIYDWTA----DVMNPLWDAAQARRKLRAAPALLAADALLDQTIFAG 151 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 152 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 195 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 196 --TWKKAFVLKKHYQVHTKTRCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 243 >gi|297463383|ref|XP_001789711.2| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|297488077|ref|XP_002696720.1| PREDICTED: nei endonuclease VIII-like 1 (E. coli) [Bos taurus] gi|296475464|gb|DAA17579.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 401 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 84/242 (34%), Gaps = 30/242 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYS----ISALARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GM+GSF + + P H + + Sbjct: 57 RLTLSPLPGAQPHREPLALVFRFGMTGSFQLVPSDALPP-------HAHLRFYTAPPGPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG DL ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGRWDL---GGEWQPGR----GPCVLLEYEQFRENVLRNLADKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+ GIGN E L+R ++ P K R++++ + + + + + Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLEALQQRRPSPELTLSQKIRAKLQN 222 Query: 229 ID 230 D Sbjct: 223 PD 224 >gi|27696577|gb|AAH43297.1| Neil1 protein [Mus musculus] Length = 253 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 30/218 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + K + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYH----ISALARGKEL 56 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L LS++ GMSGSF + P+H H+ + Sbjct: 57 RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAHLRFY--TAPPAPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG D ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 200 >gi|255536224|ref|YP_003096595.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] gi|255342420|gb|ACU08533.1| Endonuclease [Flavobacteriaceae bacterium 3519-10] Length = 244 Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 102/291 (35%), Gaps = 52/291 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + + + K TVTD + G+K++ + K Sbjct: 1 MPEGPTILNLTSKISRF-KGKTVTDAT--------GYAEMDKTGIAGQKLMAIDAYGKNF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + + + VHLG+ GS +I + + + ++D + Sbjct: 52 IFVF-KDFFVTVHLGLFGSMLINK--------------------RKKSNASFALHFDD-K 89 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNS--NLKNALLNQKIVA 178 F + + + +F+ Y+ +K + + +AL++Q + Sbjct: 90 EINFYIANTKKIDGKPQDHFNYNTDILKKTFDGEYVLSTLQEKYAEKMIGDALMDQDLFT 149 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+GNI E+L+RAK+ P P+ L LI+ + + ++ S D Sbjct: 150 GVGNIIRVESLYRAKIHPE------SVIRNIPEKKLVFLIETVVNYAYEFLEQ---SKED 200 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 V I YGK P +I + + R T+ C CQK Sbjct: 201 TVKEKTLI---------YGKKICPKDKW-ELIIEEMGKVKRKTYVCPKCQK 241 >gi|148693942|gb|EDL25889.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_b [Mus musculus] Length = 266 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 30/218 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + K + R S+A I R K L Sbjct: 14 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYH----ISALARGKEL 69 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L LS++ GMSGSF + P+H H+ + Sbjct: 70 RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAHLRFY--TAPPAPR 122 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG D ++Q GP F L + + + Sbjct: 123 LALCFVDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPIC 175 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 176 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 213 >gi|71043710|ref|NP_001020925.1| endonuclease VIII-like 1 [Rattus norvegicus] gi|68533825|gb|AAH99125.1| Nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] gi|149041762|gb|EDL95603.1| nei endonuclease VIII-like 1 (E. coli) [Rattus norvegicus] Length = 387 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 79/218 (36%), Gaps = 30/218 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + K + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNEICKGLVFGGCVEKSSVSRNPEVPFESSAYH----ISALARGKEL 56 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L LS++ GMSGSF + P+H H+ + Sbjct: 57 RLTLSPLPGSHPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAHLRFY--TAPPAPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG D ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ALL+Q+ GIGN E L+R K+ P K R++++ Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEA 200 >gi|332265719|ref|XP_003281864.1| PREDICTED: endonuclease 8-like 1-like [Nomascus leucogenys] Length = 297 Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 101/283 (35%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + + Sbjct: 57 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFY--TAPSGPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYK---------- 216 LL+Q+ GIGN E L+R K+ P K RS L Q +P+ L + Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 264 >gi|51247632|pdb|1TDH|A Chain A, Crystal Structure Of Human Endonuclease Viii-Like 1 (Neil1) Length = 364 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRESVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK------------ 216 LL+Q+ GIGN E L+R K+ P K RS+++ P L Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG R Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---RGYGSESGEEDFAAFRAWLRCYG 264 >gi|301345446|ref|ZP_07226187.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595027|ref|ZP_07240035.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 71 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + +L ++ N V + + +LR+ P + G+++I ++RR+KY+ Sbjct: 1 MPELPEVETTKTSLFPLL-NQKVLSVEVRNPSLRWPIPDNVQK-LVGQRLIGLNRRSKYI 58 Query: 61 LIELEGNLSIIVHL 74 L E E + ++ HL Sbjct: 59 LAEFEQDQ-MLWHL 71 >gi|14790078|gb|AAH10876.1| NEIL1 protein [Homo sapiens] gi|22004053|dbj|BAC06476.1| endonuclease VIII [Homo sapiens] gi|123981054|gb|ABM82356.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] gi|123995859|gb|ABM85531.1| nei endonuclease VIII-like 1 (E. coli) [synthetic construct] Length = 390 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK------------ 216 LL+Q+ GIGN E L+R K+ P K RS+++ P L Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG R Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---RGYGSESGEEDFAAFRAWLRCYG 264 >gi|10438774|dbj|BAB15337.1| unnamed protein product [Homo sapiens] Length = 390 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRESVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK------------ 216 LL+Q+ GIGN E L+R K+ P K RS+++ P L Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG R Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---RGYGSESGEEDFAAFRAWLRCYG 264 >gi|22094129|ref|NP_082623.1| endonuclease 8-like 1 [Mus musculus] gi|56404617|sp|Q8K4Q6|NEIL1_MOUSE RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|22004055|dbj|BAC06477.1| endonuclease VIII [Mus musculus] gi|148693941|gb|EDL25888.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Mus musculus] Length = 389 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 93/283 (32%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + K + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYH----ISALARGKEL 56 Query: 61 LIELE---------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L LS++ GMSGSF + P+H H+ + Sbjct: 57 RLTLSPLPGSQPPQKPLSLVFRFGMSGSFQLVPAEAL-----PRHAHLRFY--TAPPAPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG D ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK---------- 216 ALL+Q+ GIGN E L+R K+ P K R++++ P L Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQCRPSPELTLSQKIKAKLQN 222 Query: 217 --LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 L++ V + + GG + F+ YG Sbjct: 223 PDLLELCHLVPKEVVQLGGKGY-GPERGEEDFAAFRAWLRCYG 264 >gi|61554363|gb|AAX46545.1| nei endonuclease VIII-like 1 [Bos taurus] Length = 332 Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 84/242 (34%), Gaps = 30/242 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYS----ISALARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GM+GSF + + P H + + Sbjct: 57 RLTLSPLPGAQPHREPLALVFRFGMTGSFQLVPSDALPP-------HAHLRFYTAPPGPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG DL ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGRWDL---GGEWQPGR----GPCVLLEYEQFRENVLRNLADKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDA 228 ALL+Q+ GIGN E L+R ++ P K R++++ + + + + + Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLEALQQRRPSPELTLSQKIRAKLQN 222 Query: 229 ID 230 D Sbjct: 223 PD 224 >gi|294626227|ref|ZP_06704832.1| DNA-formamidopyrimidine glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599492|gb|EFF43624.1| DNA-formamidopyrimidine glycosylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 275 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 97/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TQAFVGRRIVRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S+ +H + GS+ I KP P + + + Y Sbjct: 77 LIEF-AHFSVRIHFLLFGSYRINED---KPNAVP---RLCLEFSKGQRLNFYACSVQ--- 126 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLN-QKIVAG 179 +E L Y + + ++A + + L L Q I AG Sbjct: 127 ------FIERPLDEIYDWTA----DVMNPLWDAAQARRKLRAAPAMLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 177 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ +T P G ++ AGR F+C CQ+ Sbjct: 221 --TWKKAFVLKKHYQVHTRTRCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|114658202|ref|XP_001143488.1| PREDICTED: nei endonuclease VIII-like 1 isoform 2 [Pan troglodytes] gi|114658204|ref|XP_523224.2| PREDICTED: nei endonuclease VIII-like 1 isoform 11 [Pan troglodytes] gi|114658206|ref|XP_001143639.1| PREDICTED: nei endonuclease VIII-like 1 isoform 3 [Pan troglodytes] gi|114658208|ref|XP_001143703.1| PREDICTED: nei endonuclease VIII-like 1 isoform 4 [Pan troglodytes] gi|114658210|ref|XP_001143868.1| PREDICTED: nei endonuclease VIII-like 1 isoform 5 [Pan troglodytes] gi|114658212|ref|XP_001144008.1| PREDICTED: endonuclease 8-like 1 isoform 7 [Pan troglodytes] gi|114658214|ref|XP_001144235.1| PREDICTED: nei endonuclease VIII-like 1 isoform 10 [Pan troglodytes] Length = 390 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 82/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ ++ Sbjct: 57 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--RR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 200 >gi|297697156|ref|XP_002825736.1| PREDICTED: endonuclease VIII-like 1-like isoform 3 [Pongo abelii] Length = 402 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 100/283 (35%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 13 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 68 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 69 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPGL--R 121 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 122 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 176 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYK---------- 216 LL+Q+ GIGN E L+R K+ P K RS L Q +P+ L + Sbjct: 177 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPD 236 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 237 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 276 >gi|114658216|ref|XP_001144075.1| PREDICTED: nei endonuclease VIII-like 1 isoform 8 [Pan troglodytes] gi|114658218|ref|XP_001144152.1| PREDICTED: nei endonuclease VIII-like 1 isoform 9 [Pan troglodytes] Length = 424 Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 82/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ ++ Sbjct: 57 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--RR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 200 >gi|297697152|ref|XP_002825734.1| PREDICTED: endonuclease VIII-like 1-like isoform 1 [Pongo abelii] Length = 390 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 100/283 (35%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPGL--R 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYK---------- 216 LL+Q+ GIGN E L+R K+ P K RS L Q +P+ L + Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 264 >gi|72055880|ref|XP_798656.1| PREDICTED: similar to heat shock protein protein [Strongylocentrotus purpuratus] gi|115664558|ref|XP_001178758.1| PREDICTED: similar to heat shock protein protein [Strongylocentrotus purpuratus] Length = 684 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 99/340 (29%), Gaps = 97/340 (28%) Query: 1 MPELPEVE----IIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 MPE P V R+ + + V + + R+ RG I V Sbjct: 174 MPEGPSVRRWGDTARQFIHKRI--KVVRGVSKVMERERW----------RGACINAVVVY 221 Query: 57 AKYLLIEL--------------------------------------EGNLSIIVHLGMSG 78 K L + L + ++ H M G Sbjct: 222 GKQLFLHLLQNSPSGNDTSGNSEPDTSARKKTMKACDLKEENIDDRDDSIWYRYHFLMWG 281 Query: 79 SFII-------EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 S + + AK + P+ + + K +++ G + +V+ Sbjct: 282 SLRANEYKEPSKRSKRAKKSEAPKAPNPMVEFYFED---KTFLVFYG----GSIRIVDGP 334 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 + + G + +F+ K + +++Q AG GNI E L+ Sbjct: 335 CEDE-------GTDVLSETFDFEKAATALL-KPIPICYTIMDQMHFAGAGNIVKNEVLYA 386 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 ++ P+ +L ++ +L +E+ + D + + F + Sbjct: 387 CRMHPLELGSNLTRSEAV------QLAEEVVRFTKDWLK--------WEEELPEYQKFGS 432 Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAG---RSTFYCTYCQ 288 +Y K P G R R T +C CQ Sbjct: 433 WLKMYWKFKCP----DGHKTMRGFFGDELKRMTMWCPECQ 468 >gi|213022931|ref|ZP_03337378.1| endonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + + R K L Sbjct: 18 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLK-----PYESQLTGQLVTRIETRGKAL 72 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS 86 L L++ H + G + + T Sbjct: 73 LTHFSNGLTLYSHNQLYGVWRVIDTG 98 >gi|78046218|ref|YP_362393.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034648|emb|CAJ22293.1| putative DNA-formamidopyrimidine glycosylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 275 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 98/293 (33%), Gaps = 54/293 (18%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + I+R + + + + K A +K++ + K+ Sbjct: 26 MPEGPSLVILRED-TQAFVGRKIVRVSGNSKQDI--------ARLDQQKVLALRSWGKHF 76 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 LIE + S+ +H + GS+ I KP P + + +N Y Sbjct: 77 LIEF-AHFSVRIHFLLFGSYRINED---KPNAVP---RLGLEFSNGQRLNFYACSVQ--- 126 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALL-NQKIVAG 179 +E L Y + + ++ + + L L +Q I AG Sbjct: 127 ------FIERPLDEVYDWTA----DVMNPLWDPAQARRKLRAAPALLAADALLDQTIFAG 176 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239 +GNI E L R ++ P +L P L +L+ + + D Sbjct: 177 VGNIIKNEVLHRIRVHPESTVGAL------PARKLGELVTQARDYSFDFY---------- 220 Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQ---AGRSTFYCTYCQK 289 + + V+ KT P G ++ AGR F+C CQ+ Sbjct: 221 --TWKKAFVLKKHYQVHTKTSCP---RDGAPLQYRKHLGKAGRRAFFCEVCQR 268 >gi|151557030|gb|AAI49866.1| NEIL1 protein [Bos taurus] Length = 221 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 78/218 (35%), Gaps = 30/218 (13%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + R S+A I R K L Sbjct: 1 MPEGPELHLASHFVNEACRELVFGGCVEKSPVSRNPEVPFESSAYS----ISALARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GM+GSF + + P H + + Sbjct: 57 RLTLSPLPGAQPQREPLALVFRFGMTGSFQLVPSDALPP-------HAHLRFYTAPPGPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG DL ++Q GP F L + + + Sbjct: 110 LALCFVDIRRFGRWDL---GGEWQPGR----GPCVLLEYEQFRENVLRNLADKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 ALL+Q+ GIGN E L+R ++ P K R++++ Sbjct: 163 EALLDQRFFNGIGNYLRAEILYRLRIPPFEKARTVLEA 200 >gi|205360991|ref|NP_078884.2| endonuclease 8-like 1 [Homo sapiens] gi|56404654|sp|Q96FI4|NEIL1_HUMAN RecName: Full=Endonuclease 8-like 1; AltName: Full=DNA glycosylase/AP lyase Neil1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil1; AltName: Full=Endonuclease VIII-like 1; AltName: Full=FPG1; AltName: Full=Nei homolog 1; Short=NEH1; AltName: Full=Nei-like protein 1 gi|29501766|gb|AAO74826.1| nei endonuclease VIII-like 1 (E. coli) [Homo sapiens] gi|119619661|gb|EAW99255.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] gi|119619666|gb|EAW99260.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_a [Homo sapiens] Length = 390 Score = 86.5 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 98/283 (34%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK------------ 216 LL+Q+ GIGN E L+R K+ P K RS+++ P L Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQKIRTKLQNPD 224 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 225 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 264 >gi|309807130|ref|ZP_07701107.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] gi|308166481|gb|EFO68683.1| zinc finger found in FPG and IleRS [Lactobacillus iners LactinV 03V1-b] Length = 78 Score = 86.5 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 216 KLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIV 275 +L +I + AI G++ ++ DG G +Q+ VYGK+GEPC S C + +I Sbjct: 3 ELFYDINNTIKIAIQYHGTTFHSFLDADGHTGKYQSMLKVYGKSGEPC-SRCNTTLEKIK 61 Query: 276 QAGRSTFYCTYCQ 288 GR T +C CQ Sbjct: 62 VNGRGTTFCPLCQ 74 >gi|149495026|ref|XP_001518546.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli), partial [Ornithorhynchus anatinus] Length = 515 Score = 86.5 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 25/214 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + V + + R S + I VSR K + Sbjct: 1 MPEGPELYLASRYVNEVCRGLVFAGAVEKSSVSRNPEVPFCSDS---YHISAVSR-GKEV 56 Query: 61 LIELE-------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + L G + ++ GMSGSF + P+H H+ + Sbjct: 57 KLTLTPLTGTEPGPVDLVFRFGMSGSFRLVPAEAL-----PRHAHLRF---YTAAPCRRA 108 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQ-FHKKNSNLKNALL 172 + + D RRFG ++ T + P + F L + N + ALL Sbjct: 109 LCFVDVRRFGRWEVQGTWQAGRGPCVLQ-----EYEKFRENVLQNLEDKVFNKPICEALL 163 Query: 173 NQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 +Q+ GIGN E L+R ++ P + R++++ Sbjct: 164 DQRFFNGIGNYLRAEILYRLRIPPFERARTVLEA 197 >gi|119619663|gb|EAW99257.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_c [Homo sapiens] Length = 424 Score = 86.1 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 110 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 200 >gi|166157945|ref|NP_001107382.1| nei endonuclease VIII-like 2 [Xenopus (Silurana) tropicalis] gi|163915446|gb|AAI57270.1| LOC100135209 protein [Xenopus (Silurana) tropicalis] Length = 313 Score = 86.1 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 88/346 (25%), Gaps = 103/346 (29%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P +RR L+ V + K + +GK+ K Sbjct: 1 MPEGP---TVRRFCSLVSPFVGQNVVKVGGSTKKIAL-------QDLQGKQFHYCQVHGK 50 Query: 59 YLLIEL--------------------------------------------EGNL------ 68 L +E + + Sbjct: 51 NLYLEFTTKAVGNILSGTEDAKEHIDQAGGSQKDYSIIQPTSEEHSESLQDADYSEIHMS 110 Query: 69 -SIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 + H G+ GS + AK T + + + GF+ Sbjct: 111 RWLRFHFGLYGSVRSNEFARAKQANK--------RGDWRDPTPRLILNFESG---GFLVF 159 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 + + P + F+ L++QK +G+GNI E Sbjct: 160 YNCRMAWCSSPASKPNCDVLSPEFDTEQAVRALSASQPVCFT-LMDQKCFSGVGNIIKNE 218 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 L+ ++ P L + P + L+ L+ D + + + Sbjct: 219 ILFLEQVHP------LCLGSLLPIEKLHSLVSHTLHFTSDWLSS---------KMKKEAL 263 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 ++ Y C G + + R T++C CQ Sbjct: 264 HYHIYMKEY------CDK--GHKVIKEKLGPPYGIKRLTYFCPVCQ 301 >gi|213581866|ref|ZP_03363692.1| formamidopyrimidine-DNA glycosylase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 63 Score = 85.7 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE RR + + T+ + LR+ ++ V RRAKYL Sbjct: 1 MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIY-RLSDTPVLSVQRRAKYL 59 Query: 61 LIEL 64 L+EL Sbjct: 60 LLEL 63 >gi|194038635|ref|XP_001924578.1| PREDICTED: endonuclease 8-like 1 [Sus scrofa] Length = 389 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 95/285 (33%), Gaps = 43/285 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + V C+ + + + F ++ I R K L Sbjct: 1 MPEGPELHLASHFVNEAC-GELVFGGCVEKSPVSRNPEVPFESSAYH---ISALARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GM+GSF + P H + + + Sbjct: 57 RLTLSPLPGAQPPQEPLALVFRFGMTGSFQLVPRDALPP-------HAHLRFYTAPPSPQ 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLK 168 + + D RRFG +L ++ P R GP F L + + + Sbjct: 110 LALCFVDIRRFGRWEL-----GGEWDPGR--GPCVLLEYEQFRENVLRNLADKAFDRPIC 162 Query: 169 NALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS---------LIQNNGTPKDILYKL-- 217 ALL+Q+ GIGN E L R ++ P K R+ L + I KL Sbjct: 163 EALLDQRFFNGIGNYLRAEILHRLRIPPFEKARTVLEALQRHRLSPELTLSQKIKAKLQN 222 Query: 218 --IQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTG 260 + E+ + + G + F+ YG G Sbjct: 223 PDLLELCHSVPKEVVQLGGKGYGPESREEDFAAFRAWLRCYGTPG 267 >gi|119619665|gb|EAW99259.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_e [Homo sapiens] Length = 433 Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 44 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 99 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 100 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 152 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 153 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 207 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 208 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 243 >gi|297697154|ref|XP_002825735.1| PREDICTED: endonuclease VIII-like 1-like isoform 2 [Pongo abelii] Length = 476 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 100/283 (35%), Gaps = 45/283 (15%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 87 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 142 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 143 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPGL--R 195 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 196 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 250 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYK---------- 216 LL+Q+ GIGN E L+R K+ P K RS L Q +P+ L + Sbjct: 251 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPD 310 Query: 217 LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 311 LLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 350 >gi|119619664|gb|EAW99258.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_d [Homo sapiens] Length = 476 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 87 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 142 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 143 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 195 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + D RRFG DL + P + F L + + + A Sbjct: 196 LALCFVDIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 250 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 LL+Q+ GIGN E L+R K+ P K RS+++ Sbjct: 251 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEA 286 >gi|55727714|emb|CAH90608.1| hypothetical protein [Pongo abelii] Length = 240 Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 86/240 (35%), Gaps = 26/240 (10%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 1 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 57 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPGL--R 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNA 170 + + RRFG DL + P + F L + + + A Sbjct: 110 LALCFVGIRRFGRWDLGGKWQPGRGPCVLQ-----EYQQFRENVLRNLADKAFDRPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 LL+Q+ GIGN E L+R K+ P K RS+++ + + + + + D Sbjct: 165 LLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQRRPSPELTLSQKIRTKLQNPD 224 >gi|156374930|ref|XP_001629836.1| predicted protein [Nematostella vectensis] gi|156216845|gb|EDO37773.1| predicted protein [Nematostella vectensis] Length = 290 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 94/276 (34%), Gaps = 41/276 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT-DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKY 59 MPE PE+ + + K T I N + H I R K Sbjct: 1 MPEGPELHKAALLVNTMCKGRVFTGKIKKSAANYKNPEVEHNYKEYT----IRAESRGKE 56 Query: 60 LLIELEG--------------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTN 105 + + L G +L I+ GMSG F + +H H+ Sbjct: 57 MAVILSGYPLANDKKRAKKNGDLRILFRFGMSGRFQFGPVD-----EMHKHAHLNFYTKT 111 Query: 106 NTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADN--SFNAIYLTHQ-FHK 162 K + + D RRFG + +T + + GP+P +F L + Sbjct: 112 EKKDKGLVLSFVDVRRFGGWQVKDTWSEDR-------GPDPMFEYQAFRENVLNNLDSSV 164 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQ 222 N L L NQ+ GIGN E ++R+ + P R + + L +E + Sbjct: 165 FNKPLCEVLHNQRYFNGIGNYLRAEIIFRSGIPPFTCARDV-------LESLQVYPEEKK 217 Query: 223 KVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGK 258 D ++ R+ V++ G ++S Y + Sbjct: 218 PCTPDLLELCHLVPREVVNLPGVGYEPSGSYSGYSR 253 >gi|329296052|ref|ZP_08253388.1| endonuclease VIII [Plautia stali symbiont] Length = 108 Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ L M +T++ L+ + A G+ I R K L Sbjct: 1 MPEGPEIRRAADQLAAAMVGKPLTEVWFAFPALK-----TYEPALMGETIDAFETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAK 89 L L++ H + G + + + Sbjct: 56 LTHFSNGLTLYSHNQLYGVWRVVPSGTEP 84 >gi|109085580|ref|XP_001086780.1| PREDICTED: endonuclease VIII-like 2 [Macaca mulatta] Length = 332 Score = 83.0 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 68/229 (29%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 126 DAGRWLRVSFGLFGSVWVNEFSRAKKANK--------RGDWRDPSPRLVLYFGGG---GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 LAFYNCQMSWSSSPVVTPACDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 E L+RA + P L + L+ + + + G Sbjct: 234 KNEVLYRAGIHP------LSLGSALSAPRREALVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 275 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPPGGFQRVTWWCPQCQ 319 >gi|168705539|ref|ZP_02737816.1| Formamidopyrimidine-DNA glycolase [Gemmata obscuriglobus UQM 2246] Length = 100 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPELPEVE + R+L ++ +T + LR + ++AA G ++ V RR K++ Sbjct: 1 MPELPEVETVVRDLRPLLTGRVITAVRRSAFKLRRTWNPAWAAALAGTRVEAVRRRGKWI 60 Query: 61 LIELE 65 L++LE Sbjct: 61 LVDLE 65 >gi|321463206|gb|EFX74223.1| hypothetical protein DAPPUDRAFT_57329 [Daphnia pulex] Length = 294 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 96/292 (32%), Gaps = 64/292 (21%) Query: 1 MPELPEVEIIRRNLMMVMK-----NMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSR 55 MPE PE+ I + MK + + +D P + I Sbjct: 1 MPEGPELHISSLFINDSMKDLIFSGKILKSEVSKNPVVEWDVPLY--------TI-KAES 51 Query: 56 RAKY--LLIE----------LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-S 102 R K L +E LE +SI+ GMSG F + P+H+H+ + Sbjct: 52 RGKEMKLWLEEYSPDKKGRQLEK-ISILFRFGMSGCFKLSTVD-----DIPKHSHLRFLT 105 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-- 160 +T ++ + + D RRFG E + + GP P + Sbjct: 106 ITKDSEIPIQVLNFVDFRRFGRW---EKNADWGSDR----GPCPIT---DYETFRKNIVN 155 Query: 161 -----HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILY 215 K + LLNQK GIGN E L+R+K++P + S++ Sbjct: 156 NLEDPAFKQKAICEVLLNQKFFNGIGNYLRAEILFRSKIAPFDEAYSVLCKWKDSATYPI 215 Query: 216 K-----------LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 K L + +GG D + G F+N Y Sbjct: 216 KSEKVLPIVKDPLYLCHAVCMEVLKLSGGY---DVENGLKDHGAFENWLQCY 264 >gi|115726436|ref|XP_001178097.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115890800|ref|XP_001186438.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 480 Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 86/265 (32%), Gaps = 57/265 (21%) Query: 46 RGKKIIDVSRRAKYLLIEL----------------EGNLSIIVHLGMSGSFIIEHTSC-- 87 G + DV K L + L E ++ I H M GS + +C Sbjct: 26 SGASLEDVRVYGKRLFLHLVHKRVSTAESESEDSDEESVWIRCHFLMWGSVRVNEFNCKS 85 Query: 88 AKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPA 147 +K K P+ + + Y + + +PP + Sbjct: 86 SKTNKFPE-PRLIFYFSKEEFLVFYGGSF---------------QEMNHPPEDESRRDIL 129 Query: 148 DNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 + FN + + LL+QK AG+GNI E L+ P++ L + Sbjct: 130 SDGFNRSRAEDCILG-DLPISFILLDQKKFAGLGNIIKDEVLFSTGTHPMQLGCQLSRAK 188 Query: 208 GTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNC 267 T I+ K++ ++ L ++ SS F + +Y K C Sbjct: 189 ATV--IVEKVVTFTKRWLAWKMEEKPSS------------KFGDWTEIYKKA--MCPK-- 230 Query: 268 GQMIRRIVQA----GRSTFYCTYCQ 288 G + + R T++C CQ Sbjct: 231 GHETTKSMFGPAGMERITYWCPKCQ 255 >gi|126272518|ref|XP_001379906.1| PREDICTED: similar to Nei endonuclease VIII-like 1 (E. coli) [Monodelphis domestica] Length = 420 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 30/239 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + K++ + R S+A R I + R K + Sbjct: 1 MPEGPELYLASCYVNSMCKDLVFAGPVEKSEVSRNPEVPFESSAYR----ISATSRGKEV 56 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L ++ GMSGSF + P+H H+ + + Sbjct: 57 RLTLSPLPKAHPPQEPLDLVFRFGMSGSFQLVPADAL-----PKHAHLRFY--TISPAPR 109 Query: 112 YRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN-SNLKNA 170 + + D RRFG ++ T + P + F L + +K + A Sbjct: 110 QALCFVDVRRFGHWEVQGTWQPGRGPCVLQ-----EYEKFRENVLQNLANKTFDKPICEA 164 Query: 171 LLNQKIVAGIGNIYVCEALWRAKLSPIRKTRS----LIQNNGTPKDILYKLIQEIQKVL 225 LL Q+ GIGN E L+R K+ P K R+ L P+ L K I+ + Sbjct: 165 LLEQRFFNGIGNYLRAEILYRLKIPPFEKARTVLEALKHRRQDPELTLSKKIKAKLENP 223 >gi|61316457|ref|NP_001013021.1| endonuclease 8-like 2 [Bos taurus] gi|56404518|sp|Q6IE77|NEIL2_BOVIN RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|50841453|tpe|CAE48362.1| TPA: NEIL2 protein [Bos taurus] gi|296484952|gb|DAA27067.1| nei like 2 [Bos taurus] Length = 329 Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 68/229 (29%), Gaps = 41/229 (17%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNH-VTISLTNNTNTKKYRVIYNDPRRFGF 124 + V G+ GS + S AK L + + + YN + F Sbjct: 122 AERWLQVSFGLFGSIRVNEFSRAKKANKRGDWRDPVPRLVLHFSGSGFLAFYNCQMTWRF 181 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 V + + F+ + + LL+Q+ +G+GNI Sbjct: 182 SSPVVSPAS-----------DILSEKFHRGQALEAL-GREQPICYTLLDQRYFSGLGNII 229 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L L L+ + D + G Sbjct: 230 KNEALFRAGIHPLSPGSLLGLPR------LEALVDHVVAFSADWLQ-------------G 270 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G + R R T++C CQ Sbjct: 271 KFQGTRQHTQIYQKEQCPA----GHQVVRESLGPPGGFQRLTWWCPQCQ 315 >gi|255535130|ref|YP_003095501.1| Formamidopyrimidine-DNA glycolase [Flavobacteriaceae bacterium 3519-10] gi|255341326|gb|ACU07439.1| Formamidopyrimidine-DNA glycolase [Flavobacteriaceae bacterium 3519-10] Length = 245 Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 57/294 (19%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK-- 58 MPE P + L + + N + + K Sbjct: 1 MPEGPSI----LILKEATQKFIGEKVISATGNAKIAM-----EKLPDLTFEEYRIFGKQS 51 Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118 YL+ G I VHL + GS+ ++ + IK + + + N + +N Sbjct: 52 YLVF---GEAVIRVHLLLFGSYSVD-----EQIKPDRQLRLQLKFPNGD------LYFNS 97 Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-KKNSNLKNALLNQKIV 177 + L+E S+ + + + + + + + + LL+Q I Sbjct: 98 CS----VKLLERSVLREIDWHA----DVLSDDWKPLKARKKLKLQPERMACDVLLDQNIF 149 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 +G+GNI E L+R + P +L P L LI E + Sbjct: 150 SGVGNIIKNEVLFRIGVHPESLVGNL------PPKKLSALIFEARNYSF----------- 192 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMI--RRIVQAGRSTFYCTYCQK 289 D++ +N V+ T + C CG+++ R + R +F+C QK Sbjct: 193 DFLRWKKEYVLKKNWL-VH--TKKTC-PKCGELLTKRHTGLSNRRSFFCEKDQK 242 >gi|297519506|ref|ZP_06937892.1| endonuclease VIII, 5-formyluracil [Escherichia coli OP50] Length = 72 Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ NL +K +TD+ L+ + + G+ + V R K L Sbjct: 1 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLK-----TYQSQLIGQHVTHVETRGKAL 55 Query: 61 LIELEGNLSIIVHLGMS 77 L +L++ H + Sbjct: 56 LTHFSNDLTLYSHNQLY 72 >gi|332244650|ref|XP_003271487.1| PREDICTED: endonuclease 8-like 2 isoform 1 [Nomascus leucogenys] Length = 332 Score = 78.8 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 70/229 (30%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 126 DAGRWLCVSFGLFGSVWVNEFSRAKKANK--------RGDWRDPSPRLVLHFGGG---GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 VAFYNCQMSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 234 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 275 KFEGKPQHTQVYQKEQCPA----GHQVMKEAFGPQNGLQRLTWWCPQCQ 319 >gi|22004057|dbj|BAC06478.1| hypothetical protein [Homo sapiens] Length = 332 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 70/229 (30%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 126 DAGRWLRVSFGLFGSVWVNDFSRAKKANK--------RGDWRDPSPRLVLHFGGG---GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 234 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 275 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 319 >gi|114623546|ref|XP_001141824.1| PREDICTED: endonuclease 8-like 2 isoform 1 [Pan troglodytes] Length = 289 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 71/229 (31%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + ++ GF Sbjct: 65 DAGRWLRVSFGLFGSIWVNDFSRAKKANK--------RGDWRDPSPRLVLHFSGG---GF 113 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 114 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 172 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 173 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 213 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 214 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 258 >gi|114623542|ref|XP_519606.2| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|114623544|ref|XP_001141968.1| PREDICTED: endonuclease 8-like 2 isoform 2 [Pan troglodytes] Length = 350 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 71/229 (31%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + ++ GF Sbjct: 126 DAGRWLRVSFGLFGSIWVNDFSRAKKANK--------RGDWRDPSPRLVLHFSGG---GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 234 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 275 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 319 >gi|126303985|ref|XP_001381635.1| PREDICTED: similar to NEIL2 protein [Monodelphis domestica] Length = 417 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 73/231 (31%), Gaps = 47/231 (20%) Query: 66 GNLSIIVHLGMSGSFI---IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRF 122 L + H G+ GS + + A + + + L + K + + + R + Sbjct: 131 SGLWLCFHFGLFGSVRASELSRATKANKRGDWKDPIPRLVL----HFAKGFLAFYNCRIY 186 Query: 123 GFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGN 182 L T + F+ K+ S + LL+Q+ AG+GN Sbjct: 187 --WCLGPTVKPTS---------DILSEEFDRRQALEAL-KQASPVSYTLLDQRYFAGLGN 234 Query: 183 IYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHI 242 I E L+ A++ P+ L N L L+ + + + Sbjct: 235 IIKNEVLYLARIHPLSLGSCLTPLN------LESLLDHVVSFSVGWLQK----------- 277 Query: 243 DGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G + + R T++C +CQ Sbjct: 278 --KLEGKPLHHLIYQKEQCPA----GHQVMKDSFGPPGSFQRLTWWCPHCQ 322 >gi|21450800|ref|NP_659480.1| endonuclease 8-like 2 isoform a [Homo sapiens] gi|209364526|ref|NP_001129218.1| endonuclease 8-like 2 isoform a [Homo sapiens] gi|56404653|sp|Q969S2|NEIL2_HUMAN RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|15530311|gb|AAH13952.1| NEIL2 protein [Homo sapiens] gi|15530332|gb|AAH13964.1| NEIL2 protein [Homo sapiens] gi|16551546|dbj|BAB71120.1| unnamed protein product [Homo sapiens] gi|31415699|gb|AAP45052.1| nei like 2 (E. coli) [Homo sapiens] gi|119586027|gb|EAW65623.1| nei like 2 (E. coli), isoform CRA_a [Homo sapiens] gi|119586029|gb|EAW65625.1| nei like 2 (E. coli), isoform CRA_a [Homo sapiens] gi|190690293|gb|ACE86921.1| nei like 2 (E. coli) protein [synthetic construct] gi|190691667|gb|ACE87608.1| nei like 2 (E. coli) protein [synthetic construct] gi|208966842|dbj|BAG73435.1| nei like 2 [synthetic construct] Length = 332 Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 70/229 (30%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 126 DAGRWLRVSFGLFGSVWVNDFSRAKKANK--------RGDWRDPSPRLVLHFGGG---GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 234 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 275 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 319 >gi|209364528|ref|NP_001129219.1| endonuclease 8-like 2 isoform b [Homo sapiens] gi|21757126|dbj|BAC05030.1| unnamed protein product [Homo sapiens] gi|119586028|gb|EAW65624.1| nei like 2 (E. coli), isoform CRA_b [Homo sapiens] Length = 271 Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 70/229 (30%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 65 DAGRWLRVSFGLFGSVWVNDFSRAKKANK--------RGDWRDPSPRLVLHFGGG---GF 113 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 114 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 172 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 173 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 213 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 214 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 258 >gi|302554566|ref|ZP_07306908.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472184|gb|EFL35277.1| DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 99 Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 8/101 (7%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVWQTARRLHDALAGKVLTRSDLR-------VPRFATADITGRTVLDVTPRGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI 101 L +EG L++ HL M G++ + + + + P H I Sbjct: 54 LTRVEGGLTLHSHLRMDGAWKV-YANGRRWGGGPGHQIRAI 93 >gi|31873592|emb|CAD97774.1| hypothetical protein [Homo sapiens] gi|117645994|emb|CAL38464.1| hypothetical protein [synthetic construct] Length = 316 Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 70/229 (30%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + + GF Sbjct: 110 DAGRWLRVSFGLFGSVWVNDFSRAKKANK--------RGDWRDPSPRLVLHFGGG---GF 158 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 159 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 217 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 218 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 258 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 259 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 303 >gi|197100087|ref|NP_001125714.1| endonuclease 8-like 2 [Pongo abelii] gi|75041891|sp|Q5RAJ7|NEIL2_PONAB RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei-like protein 2 gi|55728950|emb|CAH91213.1| hypothetical protein [Pongo abelii] Length = 332 Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + R++ + GF Sbjct: 126 DAGRWLRVSFGLFGSVWVNEFSRAKQANK----------RGDWRDPSPRLVLHCGGG-GF 174 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 175 LAFYNCQMSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 233 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 234 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY + P G + + R T++C CQ Sbjct: 275 KFQGRPQRTQVYQREQCPA----GHQVMKEAFGPQDGLQRLTWWCPQCQ 319 >gi|114623540|ref|XP_001142056.1| PREDICTED: endonuclease 8-like 2 isoform 3 [Pan troglodytes] Length = 384 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 71/229 (31%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + + ++ GF Sbjct: 160 DAGRWLRVSFGLFGSIWVNDFSRAKKANK--------RGDWRDPSPRLVLHFSGG---GF 208 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + L + P+ T + F+ + + LL+Q+ +G+GNI Sbjct: 209 LAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNII 267 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L + L+ + + + G Sbjct: 268 KNEALYRAGIHPLSLGSVLSASRREV------LVDHVVEFSTAWLQ-------------G 308 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 VY K P G + + R T++C CQ Sbjct: 309 KFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDGLQRLTWWCPQCQ 353 >gi|281347692|gb|EFB23276.1| hypothetical protein PANDA_012894 [Ailuropoda melanoleuca] Length = 323 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 68/228 (29%), Gaps = 40/228 (17%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 + V G+ GS + S AK + + + GF+ Sbjct: 128 AERWLQVSFGLFGSIWVNEFSRAKKANK--------RGDWRDPIPRLVLYFGGG---GFL 176 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + P+ + F+ + + LL+Q+ +G+GNI Sbjct: 177 AFYNCQMSWSSSPVVRPTSDILSEKFDRGQALEAL-GQEQPVCYTLLDQRYFSGLGNIIK 235 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 EAL+RA + P L + L L+ + D + G Sbjct: 236 NEALYRAGIHP------LSLGSLLSPQHLEALVDHAVEFSADWLQ-------------GK 276 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Q +Y K P G + + R T++C CQ Sbjct: 277 FQGKQQHTQIYQKEQCP----GGHRVMKEAFGPPGGFQRLTWWCPQCQ 320 >gi|300867972|ref|ZP_07112611.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] gi|300333993|emb|CBN57789.1| Formamidopyrimidine-DNA glycosylase (fragment) [Oscillatoria sp. PCC 6506] Length = 77 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPELPEVE I R L + + + D+ L F F A +GK I RR K Sbjct: 1 MPELPEVETICRGLNQLTLGLEILGGDVLLENTIASPFFARDFLAGLQGKAIARWHRRGK 60 Query: 59 YLLIELEGN 67 YLL EL Sbjct: 61 YLLAELGSG 69 >gi|41053628|ref|NP_956577.1| endonuclease VIII-like 1 [Danio rerio] gi|29612540|gb|AAH49408.1| Zgc:56361 [Danio rerio] Length = 437 Score = 76.1 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 79/225 (35%), Gaps = 36/225 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + T + + A I R K + Sbjct: 1 MPEGPELHLASLFVNRMCEGVVFTGAVQKSEVNKNPEVPFCCDA----YCIKAQSRGKEV 56 Query: 61 LIELE------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 + L ++++ GMSG F + P+H H+ Sbjct: 57 RLTLTPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSLD-----ELPKHAHLRFY 111 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-H 161 + + + D RRFG + K + P + SF L++ Sbjct: 112 TNETPHWV---LSFEDTRRFGSWQPNGSWQKNRGPCIMF-----EYESFRENVLSNLSDK 163 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + + ALLNQK GIGN E L+R ++ P K R++++ Sbjct: 164 AFDKPICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKARTVLEG 208 >gi|301776577|ref|XP_002923709.1| PREDICTED: endonuclease VIII-like 2-like [Ailuropoda melanoleuca] Length = 376 Score = 76.1 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 68/228 (29%), Gaps = 40/228 (17%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 + V G+ GS + S AK + + + GF+ Sbjct: 128 AERWLQVSFGLFGSIWVNEFSRAKKANK--------RGDWRDPIPRLVLYFGGG---GFL 176 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + P+ + F+ + + LL+Q+ +G+GNI Sbjct: 177 AFYNCQMSWSSSPVVRPTSDILSEKFDRGQALEAL-GQEQPVCYTLLDQRYFSGLGNIIK 235 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 EAL+RA + P L + L L+ + D + G Sbjct: 236 NEALYRAGIHP------LSLGSLLSPQHLEALVDHAVEFSADWLQ-------------GK 276 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Q +Y K P G + + R T++C CQ Sbjct: 277 FQGKQQHTQIYQKEQCP----GGHRVMKEAFGPPGGFQRLTWWCPQCQ 320 >gi|157822593|ref|NP_001100740.1| endonuclease VIII-like 2 [Rattus norvegicus] gi|149030262|gb|EDL85318.1| nei like 2 (E. coli) (predicted) [Rattus norvegicus] Length = 330 Score = 75.7 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 E + V G+ GS + S AK + + ++ GF Sbjct: 123 EAQRWLEVRFGLFGSIWVNDFSRAKKANK--------RGDWIDPVPRLVLHFSGG---GF 171 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + PP+ + F+ + + LL+Q+ +G+GNI Sbjct: 172 LAFYNCQMSWSPPPVIEPTCDILSEKFHRGQALEALS-QAQPVCYTLLDQRYFSGLGNII 230 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA++ P+ L ++ L L+ + + D LRD Sbjct: 231 KNEALYRARIHPLSLGSFLSPSS------LEALVDHVVEFSTDW-------LRDKFQG-- 275 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K E C S G + + R T++C CQ Sbjct: 276 ----KERHTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 316 >gi|260941075|ref|XP_002614704.1| hypothetical protein CLUG_05482 [Clavispora lusitaniae ATCC 42720] gi|238851890|gb|EEQ41354.1| hypothetical protein CLUG_05482 [Clavispora lusitaniae ATCC 42720] Length = 346 Score = 75.7 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 26/157 (16%) Query: 144 PEPADNSFNAIY------LTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 P+P D + + +K LL+Q AG+GN E L+ A++ P Sbjct: 185 PDP-DPDPHGRARLAFPDFAKLVLSRRKPIKALLLDQAFFAGVGNWVSDEILYHAQIHP- 242 Query: 198 RKTRSLIQNNGTPKD-ILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVY 256 + +L ++ P+D L +L + V+ + V ++G++ F + + Sbjct: 243 --SENLAEHISDPEDPRLARLYYSLIYVMEVS-----------VAVEGNVREFPENWLML 289 Query: 257 GKTG----EPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 + G E + G + GR++ + QK Sbjct: 290 HRWGKRRKEKAKTKMGYSVAFETVGGRTSCFVPELQK 326 >gi|124249442|ref|NP_001074345.1| endonuclease VIII-like 1 [Gallus gallus] gi|53130742|emb|CAG31700.1| hypothetical protein RCJMB04_9m20 [Gallus gallus] Length = 363 Score = 75.7 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 76/208 (36%), Gaps = 34/208 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + R S A K+ SR K L Sbjct: 1 MPECPELHLAGRYINETCGGLVFEGGVQRSAVGRGPEVPFSSDA---YKVTAASR-GKEL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + LE + ++ P+H H+ + + + DPR Sbjct: 57 RLTLE-------------------PPAVRGLQPPRHAHLRF---FTRESPPRALCFVDPR 94 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPAD-NSFNAIYLTHQ-FHKKNSNLKNALLNQKIVA 178 RFG L E + P + + +F L++ + + ALLNQK Sbjct: 95 RFGTWRLGEAWQPDRGPCV------LLEYPAFRENVLSNLEDAAFDKPVCEALLNQKYFN 148 Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQN 206 GIGN E L+RAK+ P K R++++ Sbjct: 149 GIGNYLRAEILYRAKIPPFEKARTVLEA 176 >gi|260799977|ref|XP_002594913.1| hypothetical protein BRAFLDRAFT_168572 [Branchiostoma floridae] gi|229280151|gb|EEN50924.1| hypothetical protein BRAFLDRAFT_168572 [Branchiostoma floridae] Length = 199 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 69/230 (30%), Gaps = 43/230 (18%) Query: 65 EGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 E + I H M GS E+ ++ K + + L K+ + + Sbjct: 7 ERSTWIRYHFLMWGSLRANEYKGISRQSKTGKVPVPRLVLHFA---KEEFLAFYGGSMGE 63 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 V++ Q G + SF+ + + LL+Q +G+GNI Sbjct: 64 ----VDSPACDQ-------GTDILTASFDVEKAADAIQ-RAQPVCYTLLDQTCFSGLGNI 111 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E L+ AK+ P++ + L + D Sbjct: 112 IKNEVLYAAKVHPLQPGQLLSRQRALGMVQQALAFSSTWMEHKDEHK------------- 158 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 F+ + +Y K P G R R T +C+ CQ Sbjct: 159 -----FKEHWQIYFKKDCP----LGHKTSRDWFGPEDGLQRVTTWCSTCQ 199 >gi|37681885|gb|AAQ97820.1| nei endonuclease VIII-like 1 [Danio rerio] Length = 438 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 79/225 (35%), Gaps = 36/225 (16%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + T + + A I R K + Sbjct: 1 MPEGPELHLASLFVNRMCEGVVFTGAVEKSEVNKNPEVPFCCDA----YCIKAQSRGKEV 56 Query: 61 LIELE------------------GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 + L ++++ GMSG F + P+H H+ Sbjct: 57 RLTLTPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSVD-----ELPKHAHLRF- 110 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-H 161 T + + D RRFG + K + P + SF L++ Sbjct: 111 --YTNETPHRVLSFEDTRRFGSWQPNGSWQKNRGPCIMF-----EYESFRENVLSNLSDK 163 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + + ALLNQK GIGN E L+R ++ P K R++++ Sbjct: 164 AFDKPICEALLNQKYFNGIGNYLRAEILFRLQIPPFEKARTVLEG 208 >gi|73993762|ref|XP_543204.2| PREDICTED: similar to nei-like 2 [Canis familiaris] Length = 504 Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 42/229 (18%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTI-SLTNNTNTKKYRVIYNDPRRFGF 124 + V G+ GS + S AK I L + + YN + Sbjct: 298 AERWLQVSFGLFGSIWVNEFSRAKKANKRGDWRDPIPRLVLYLSGGSFLAFYNCQMSWRS 357 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 LV+ + + F+ + + LL+Q+ +G+GNI Sbjct: 358 SALVQPTS------------DILSEKFHRGQALEAL-GREQPVCYTLLDQRYFSGLGNII 404 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA + P+ L L L+ + + D + G Sbjct: 405 KNEALYRAGIHPLSLGSLLSPR------HLEALVDHVVEFSADWLQ-------------G 445 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Q +Y K P G + + R T++C CQ Sbjct: 446 KFQGKQQHTQIYQKEQCPF----GHPVMKDAFGPPGGFQRLTWWCPQCQ 490 >gi|149698301|ref|XP_001495938.1| PREDICTED: similar to NEIL2 protein [Equus caballus] Length = 333 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 69/228 (30%), Gaps = 40/228 (17%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 + V G+ GS + S AK + + + GF+ Sbjct: 127 AERWLQVRFGLFGSIWVNEFSRAKKANK--------RGDWRDPVPRLVLHFGGG---GFL 175 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + P+ + F+ + + LL+Q+ +G+GNI Sbjct: 176 AFYNCQMSWSSSPVVRPTSDILSEKFHRGQALEAL-GQEQPVCYTLLDQRYFSGLGNIIK 234 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 EAL+RA + P+ L L L+ + + D + G Sbjct: 235 NEALYRAGIHPLSLGSLLSPPR------LEVLLDHVVEFSADWLQ-------------GK 275 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Q +Y K P G + + R T++C CQ Sbjct: 276 FQGKQQHTQIYQKEQCPA----GHQVMKEAFGPPGGFQRLTWWCPQCQ 319 >gi|158937427|sp|Q5UNW7|YL720_MIMIV RecName: Full=Endonuclease 8-like L720; AltName: Full=Endonuclease VIII-like L720 Length = 274 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 93/289 (32%), Gaps = 46/289 (15%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL--EGNLSIIV- 72 KN + I + I KY+ + L + ++ Sbjct: 15 RHTKNHRIVSIS-------GPSYKRMNVDLIDYIIRKWWFAGKYIYLMLISSNKPTYVIR 67 Query: 73 -HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--VIYNDPRRFGF----M 125 H+ M G ++ + + + I L N+ + YR + DP Sbjct: 68 THMMMHGRILVGNQDSPT-----KRAFMIIQLDNDIVLRWYRSQITLLDPNCLAEIKTNY 122 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-----KKNSNLKNALLNQKIVAGI 180 + T ++ + + ++N F+ + + + LL+Q+ G+ Sbjct: 123 TICTTRQAI-MDSIKLMKYDLSNNRFDYNLFQSHLKNGINIHSSEIITDFLLDQEYFPGV 181 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI EAL+ K+ P++K + + + K I ++ ++G Sbjct: 182 GNILQQEALYDCKILPLKKVQDIDEPMFDCLCNSLKKIIDLLYESYKFRESG-------- 233 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-RIVQAGRSTFYCTYCQ 288 F +Y K+ P IR +I R T +C CQ Sbjct: 234 ------KEFGPILRIYRKSLCPLGHK---TIRKKIGLRNRMTTWCPVCQ 273 >gi|311978129|ref|YP_003987249.1| endonuclease VIII-like protein [Acanthamoeba polyphaga mimivirus] gi|55417330|gb|AAV50980.1| hydrolysis of DNA containing ring-opened N7 methylguanine [Acanthamoeba polyphaga mimivirus] gi|308204565|gb|ADO18366.1| endonuclease VIII-like protein [Acanthamoeba polyphaga mimivirus] Length = 317 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 93/289 (32%), Gaps = 46/289 (15%) Query: 16 MVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIEL--EGNLSIIV- 72 KN + I + I KY+ + L + ++ Sbjct: 58 RHTKNHRIVSIS-------GPSYKRMNVDLIDYIIRKWWFAGKYIYLMLISSNKPTYVIR 110 Query: 73 -HLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR--VIYNDPRRFGF----M 125 H+ M G ++ + + + I L N+ + YR + DP Sbjct: 111 THMMMHGRILVGNQDSPT-----KRAFMIIQLDNDIVLRWYRSQITLLDPNCLAEIKTNY 165 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH-----KKNSNLKNALLNQKIVAGI 180 + T ++ + + ++N F+ + + + LL+Q+ G+ Sbjct: 166 TICTTRQAI-MDSIKLMKYDLSNNRFDYNLFQSHLKNGINIHSSEIITDFLLDQEYFPGV 224 Query: 181 GNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYV 240 GNI EAL+ K+ P++K + + + K I ++ ++G Sbjct: 225 GNILQQEALYDCKILPLKKVQDIDEPMFDCLCNSLKKIIDLLYESYKFRESG-------- 276 Query: 241 HIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIR-RIVQAGRSTFYCTYCQ 288 F +Y K+ P IR +I R T +C CQ Sbjct: 277 ------KEFGPILRIYRKSLCPLGHK---TIRKKIGLRNRMTTWCPVCQ 316 >gi|332244652|ref|XP_003271488.1| PREDICTED: endonuclease 8-like 2 isoform 2 [Nomascus leucogenys] Length = 216 Score = 73.0 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 29/149 (19%) Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + F+ + + LL+Q+ +G+GNI EAL+RA + P+ L Sbjct: 79 DILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLS 137 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL 264 + L+ + + + G VY K P Sbjct: 138 ASRREV------LVDHVVEFSTAWLQ-------------GKFEGKPQHTQVYQKEQCPA- 177 Query: 265 SNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G + + R T++C CQ Sbjct: 178 ---GHQVMKEAFGPQNGLQRLTWWCPQCQ 203 >gi|50745254|ref|XP_420042.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 328 Score = 73.0 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 46/230 (20%) Query: 67 NLSIIVHLGMSGSFI---IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + H G+ GS S A + + + L + +++ + R Sbjct: 122 GSWLRFHFGLFGSIRANEFSRASRANKRGDWKDPAPRLVLYFESG---GFLVFYNCRMHW 178 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 LV + F+ + LL+Q+ +G+GNI Sbjct: 179 CSSLVADPTS-----------DILSAEFHRGQALDALRTS-RPICYTLLDQRYFSGLGNI 226 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E L+ K+ P+ + L Q++ L L+ + + + + Sbjct: 227 IKNEVLYLVKIHPLTQGSLLAQSD------LEHLLDCAIQFTSNWLQS------------ 268 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G ++ + R T++C CQ Sbjct: 269 -KLQGKGLHLQIYQKEQCP----LGHVVMKGALGPPGGWKRLTWWCPQCQ 313 >gi|221115178|ref|XP_002166096.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 307 Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 73/246 (29%), Gaps = 70/246 (28%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPH-HFSAATRGKKIIDVSRRAKY 59 MPE PE + + + L + F I R K Sbjct: 1 MPEGPEHYLASDFINQSCNGKIFSGNVLKSSVTKNPCIELPFKHFL-----ISAESRGKE 55 Query: 60 LLIELE--------------------------------------GNLSIIVHLGMSGSFI 81 L+++L + I+ GMSG+F Sbjct: 56 LMLKLSEFYEKDIKMDLELHNQSIKFEEINVEKQDQSTFQNKILSEVKILFQFGMSGTFT 115 Query: 82 IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRT 141 + P+H+H+ K + + D RRFG + + + + Sbjct: 116 FTSEA-----DIPKHSHLKFYTFEE---PKMVLSFVDIRRFGKWKISDNFSENR------ 161 Query: 142 LGPEPADNSFNAIYLTHQ-----FHKK--NSNLKNALLNQKIVAGIGNIYVCEALWRAKL 194 GP+P L + KK ++ AL +Q GIGN E L+RAK+ Sbjct: 162 -GPDPVRE----YALFRKNIITNLTKKTFQKSICEALHDQTYFNGIGNYLRAEILYRAKI 216 Query: 195 SPIRKT 200 P Sbjct: 217 PPFTLA 222 >gi|326916761|ref|XP_003204673.1| PREDICTED: endonuclease 8-like 2-like [Meleagris gallopavo] Length = 324 Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 72/230 (31%), Gaps = 46/230 (20%) Query: 67 NLSIIVHLGMSGSFI---IEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + H G+ GS S A + + + L + +++ + R Sbjct: 118 GSWLRFHFGLFGSIRANEFSRASRANKRGDWKDPIPRLVLYFESG---GFLVFYNCR--- 171 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 M + + + F+ + + LL+Q+ +G+GNI Sbjct: 172 -MHWCSSPVADPTS-------DILSAEFHRGRALDALRTSH-PICYTLLDQRYFSGLGNI 222 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E L+ K+ P+ + L Q++ L L+ + D + + Sbjct: 223 IKNEVLYLVKIHPLTQGSLLAQSD------LEHLLDCAIQFTSDWLQS------------ 264 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K P G ++ + R T++C CQ Sbjct: 265 -KLQGKGLHLQIYQKEQCP----LGHVVMKGALGPPGGWKRLTWWCPQCQ 309 >gi|239982671|ref|ZP_04705195.1| endonuclease VIII and DNA N-glycosylase with an AP lyase activity [Streptomyces albus J1074] gi|291454520|ref|ZP_06593910.1| endonuclease VIII Nei [Streptomyces albus J1074] gi|291357469|gb|EFE84371.1| endonuclease VIII Nei [Streptomyces albus J1074] Length = 83 Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 7/86 (8%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V L + +T L P + G+ +++V R K+L Sbjct: 1 MPEGDTVHQAAGRLHQALAGQELTVSDLR-------VPRLATVDLTGRTVVEVVARGKHL 53 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTS 86 L LEG L++ HL M GS+ I Sbjct: 54 LTRLEGGLTLHSHLRMDGSWRIFAPG 79 >gi|209364530|ref|NP_001129220.1| endonuclease 8-like 2 isoform c [Homo sapiens] gi|194376764|dbj|BAG57528.1| unnamed protein product [Homo sapiens] Length = 216 Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 29/149 (19%) Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + F+ + + LL+Q+ +G+GNI EAL+RA + P+ L Sbjct: 79 DILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLS 137 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL 264 + L+ + + + G VY K P Sbjct: 138 ASRREV------LVDHVVEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCPA- 177 Query: 265 SNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G + + R T++C CQ Sbjct: 178 ---GHQVMKEAFGPEDGLQRLTWWCPQCQ 203 >gi|47227488|emb|CAG04636.1| unnamed protein product [Tetraodon nigroviridis] Length = 533 Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNN 106 G + V K L + G+ ++ VH GM+GS I + ++ + I LTN+ Sbjct: 63 GYQYTGVDTLGKELFMYF-GSRALRVHFGMNGSMRI--NPAERKDRSSSMPVLEIHLTND 119 Query: 107 TNTKKYRVIYNDPR--RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKN 164 V + D D V+ + G + F+ + Sbjct: 120 ------IVCFFDSTVEARSTEDCVQKVRAME-------GLDVCSQQFSFSRSEEAARSQC 166 Query: 165 -SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN 207 L + L++Q ++ G+GNI EAL+ + L P K L Sbjct: 167 CRMLCDVLMDQAVMPGVGNIIKNEALFDSGLHPAVKVEQLTAEQ 210 >gi|327288078|ref|XP_003228755.1| PREDICTED: endonuclease 8-like 2-like [Anolis carolinensis] Length = 332 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 70/226 (30%), Gaps = 42/226 (18%) Query: 69 SIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDL 127 + G+ GS E K K L N + V YN + Sbjct: 127 WLRFQFGLYGSIRANEFARANKANKRGDWRDPVPRLILNFEGGGFLVFYN-------CRI 179 Query: 128 VETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCE 187 S P L PE F+ K + + LLNQ +G+GN E Sbjct: 180 QPCSSPSNEPSTDILSPE-----FDRGKALEAL-CKPTPVCYTLLNQTYFSGLGNRIKNE 233 Query: 188 ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG 247 AL+ A++ P L + P L L+ + ++ + + VHI Sbjct: 234 ALYLARIHP------LSLGSQLPSCDLESLLDSAVQFSLEWLQSKLQKKSVQVHI----- 282 Query: 248 YFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 Y + P G +++ R T++C CQ Sbjct: 283 --------YMRDKCPA----GHEVKKEALGPPDGLKRLTWWCPQCQ 316 >gi|332862710|ref|XP_003317963.1| PREDICTED: endonuclease 8-like 2 [Pan troglodytes] Length = 234 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 32/192 (16%) Query: 102 SLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 SL + + ++ GF+ L + P+ T + F+ Sbjct: 39 SLWLQDTQVRLVLHFSGG---GFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEAL- 94 Query: 162 KKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEI 221 + + LL+Q+ +G+GNI EAL+RA + P+ L + L+ + Sbjct: 95 GQAQPVCYTLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREV------LVDHV 148 Query: 222 QKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA---- 277 + + G VY K P G + + Sbjct: 149 VEFSTAWLQ-------------GKFQGRPQHTQVYQKEQCPA----GHQVMKEAFGPEDG 191 Query: 278 -GRSTFYCTYCQ 288 R T++C CQ Sbjct: 192 LQRLTWWCPQCQ 203 >gi|296221615|ref|XP_002756814.1| PREDICTED: endonuclease VIII-like 2-like [Callithrix jacchus] Length = 216 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 29/149 (19%) Query: 145 EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLI 204 + F+ + + LL+QK +G+GNI E L+RA + P+ L Sbjct: 79 DILSEKFHRGQALEAL-GQAQPVCYTLLDQKHFSGLGNIIKNEVLYRAGIHPLSLGSVLS 137 Query: 205 QNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCL 264 + L+ + + + D G+ Q+ VY K P Sbjct: 138 ASQR------EALVDGVVEFSAAWLQ------------DKLQGHPQHT-QVYQKEWCPA- 177 Query: 265 SNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G + + R T++C CQ Sbjct: 178 ---GHQLLKEAFGPPGGFQRLTWWCPQCQ 203 >gi|289670026|ref|ZP_06491101.1| formamidopyrimidine-DNA glycosylase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 51 Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 22/51 (43%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKII 51 MPELPEVE R L + + + L R +LR+ P G I Sbjct: 1 MPELPEVETTLRGLSPHLVAQRIHGVILRRPDLRWPIPEQIERLLPGAIIQ 51 >gi|260806535|ref|XP_002598139.1| hypothetical protein BRAFLDRAFT_82922 [Branchiostoma floridae] gi|229283411|gb|EEN54151.1| hypothetical protein BRAFLDRAFT_82922 [Branchiostoma floridae] Length = 894 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 89/286 (31%), Gaps = 58/286 (20%) Query: 17 VMKNMTVTDICLHRKNLRFDFPH------------HFSAATRGKKIIDVSRRAKYLLIEL 64 +K V R R + S G + +V K L + Sbjct: 16 RLKGQRVVQTQWGRNRTRPEGAAKGSGAEQKDTTSEKSDHLVGLPLSNVETLGKELFVYF 75 Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 G+ + VH GM+GS I+ K + ++LT ++ + R Sbjct: 76 -GDFCLRVHFGMNGSVQIKGHRNKAFQKTSEP---VLTLTLTVDSVSFHDCTVQIRSSSD 131 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKK-NSNLKNALLNQKIVAGIGNI 183 +Y ++L + F+ T + L + LL+Q ++ G+GNI Sbjct: 132 CH-------DKYLQFQSL--DICSTHFSLSQATRTVSCHGDRMLCDVLLDQSVLPGVGNI 182 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 E L Q L K+ ++ + G + R Sbjct: 183 IKNEVL---------------QLKEEHVKHLVKMTRDFSMLFYKCRKEGRALSR------ 221 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQ-MIRRIVQAGRSTFYCTYCQ 288 VY + C G+ + R+ + GR T++C CQ Sbjct: 222 --------HCKVYKRQW--CGQCQGRITVCRMGENGRMTYFCEGCQ 257 >gi|10802797|gb|AAG23620.1|AF244671_1 endonuclease VIII [Carboxydothermus hydrogenoformans] Length = 99 Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGS 234 +AG+GN WR P + I L L + ++ + AG Sbjct: 1 AFLAGLGNYLR----WR----PSAVGLTGIIAKDLNAAQLDALAHALLEIPRFSYYAG-- 50 Query: 235 SLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 V + G F V+ + GEPC CG +I + + R ++C CQ Sbjct: 51 ----QVDENKHHGAL-FRFKVFHRDGEPC-ERCGSIIEKTTLSSRPFYWCPGCQ 98 >gi|118130803|ref|NP_963904.2| endonuclease 8-like 2 [Mus musculus] gi|148704121|gb|EDL36068.1| nei like 2 (E. coli) [Mus musculus] Length = 329 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 40/229 (17%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + ++ GF Sbjct: 122 DAQRWLEVRFGLFGSIWVNDFSRAKKANKKG--------DWRDPVPRLVLHFSGG---GF 170 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + PP+ + F+ + + LL+Q+ +G+GNI Sbjct: 171 LVFYNCQMSWSPPPVIEPTCDILSEKFHRGQALEALS-QAQPVCYTLLDQRYFSGLGNII 229 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 EAL+RA++ P+ + L+ + + D LRD Sbjct: 230 KNEALYRARIHPL------SLGSCLSSSSREALVDHVVEFSKDW-------LRDKFQG-- 274 Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K E C S G + + R T++C CQ Sbjct: 275 ----KERHTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 315 >gi|224061749|ref|XP_002195293.1| PREDICTED: nei endonuclease VIII-like 1 [Taeniopygia guttata] Length = 379 Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 71/217 (32%), Gaps = 27/217 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + R + + R S A I R K L Sbjct: 1 MPECPELHLAGRFINGACGALVFAGAVERSAVGRGPEVPFRSEAYS----ISAVARGKEL 56 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPR 120 + L + + P+H H+ + + + DPR Sbjct: 57 RLTLSA--------------LDPAAGPSAQDLLPRHAHLRFLTRE---SPPRALCFVDPR 99 Query: 121 RFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF-HKKNSNLKNALLNQKIVAG 179 RFG L + + P + + +F L + + + LLNQK G Sbjct: 100 RFGSWRLGDAWQPERGPCVVS-----EYQAFRENVLKNLDDRAFDKPICEVLLNQKYFNG 154 Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK 216 IGN E L+R K+ P K R++++ + K Sbjct: 155 IGNYLRAEILYRLKIPPFEKARTVLEALKEQEQERRK 191 >gi|318081945|ref|ZP_07989254.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 70 Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 1 MPELPEVEIIRRNLMMVMKNM---TVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRA 57 MPELPEVE +R L + V + ++ P +A G ++ DV R Sbjct: 1 MPELPEVEALRDFLDDHLVGRIPTRVLPVAVNVLKTYDPPP----SALVGHEVTDVRRYG 56 Query: 58 KYLLIELEGNLSII 71 K+L + +G ++ Sbjct: 57 KFLDVVTDGGPRLV 70 >gi|145628227|ref|ZP_01784028.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] gi|144980002|gb|EDJ89661.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 22.1-21] Length = 63 Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA 43 MPELPEVE + + ++ + I + + LR+ + Sbjct: 1 MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQ 43 >gi|326437772|gb|EGD83342.1| hypothetical protein PTSG_03950 [Salpingoeca sp. ATCC 50818] Length = 311 Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 27/190 (14%) Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 GMSG+F++ + P+H H+ + + + + D RRFG + Sbjct: 100 GMSGNFLLLEPGE----EMPKHAHLRFH-----SPSGHVLYFQDVRRFGCWR---PGGAW 147 Query: 135 QYPPLRTLGP---EPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWR 191 GP + D+ I L + ++NQ G+GN E L R Sbjct: 148 GLDDDTR-GPCIIQELDDVVQKIQLHLPSRAFARPICELMMNQSFFNGMGNYLRAEILHR 206 Query: 192 AKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL-----RDYVHIDGSI 246 AK+ P Q D + + S+ + + Sbjct: 207 AKIHPF------SQARAVLMDAVKRQHDGRPGFFSVCEQVLAESVALLRKHGFADDEERT 260 Query: 247 GYFQNAFSVY 256 F+ Y Sbjct: 261 RVFEEWLQCY 270 >gi|33322852|gb|AAQ07162.1|AF496471_2 formamidopyrimidine-DNA glycosylase [Lactobacillus delbrueckii subsp. lactis] Length = 47 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG 47 MPE+PEVE +RR L ++ T+ + + + P F +G Sbjct: 1 MPEMPEVETVRRTLRPLVVGKTIDHVDIWYXKVITGDPETFKRELKG 47 >gi|56404528|sp|Q6R2P8|NEIL2_MOUSE RecName: Full=Endonuclease 8-like 2; AltName: Full=DNA glycosylase/AP lyase Neil2; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Neil2; AltName: Full=Endonuclease VIII-like 2; AltName: Full=Nei homolog 2; Short=NEH2; AltName: Full=Nei-like protein 2 gi|41057603|gb|AAR98807.1| nei-like 2 [Mus musculus] Length = 329 Score = 65.7 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 42/230 (18%) Query: 65 EGNLSIIVHLGMSGS-FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFG 123 + + V G+ GS ++ + + K K L + + + V YN + Sbjct: 122 DAQRWLEVRFGLFGSXWVNDFSRAKKANKKGDWRDPVPRLVLHFSGGGFLVFYNCQMSWS 181 Query: 124 FMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNI 183 ++E + + F+ + + LL+QK +G+GNI Sbjct: 182 XXPVIEPTC------------DILSEKFHRGQALEALS-QAQPVCYTLLDQKYFSGLGNI 228 Query: 184 YVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHID 243 EAL+RA++ P+ + + ++ + E K + G Sbjct: 229 IKNEALYRARIHPLSLGS---CLSSSSREAFVDHVVEFSKDWLRDKFQG----------- 274 Query: 244 GSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 + +Y K E C S G + + R T++C CQ Sbjct: 275 -----KERHTQIYQK--EQCPS--GHQVMKETFGPPDGLQRLTWWCPQCQ 315 >gi|257482981|ref|ZP_05637022.1| formamidopyrimidine-DNA glycosylase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 36 Score = 65.3 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 253 FSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289 VYG+ G+PC CG +R I R++ YC CQ+ Sbjct: 1 MFVYGRGGQPC-KVCGTTLREIKLGQRASVYCPKCQR 36 >gi|85710814|ref|ZP_01041875.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] gi|85695218|gb|EAQ33155.1| Formamidopyrimidine DNA glycosylase [Idiomarina baltica OS145] Length = 60 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDV 53 MPELPEVE+ R + ++ + + +H LR+ P G +++ V Sbjct: 1 MPELPEVEVSRMGIAPHIEGHKIERVNVHDTRLRWPVPDQ-VHHVEGSRLLRV 52 >gi|255024134|ref|ZP_05296120.1| formamidopyrimidine-DNA glycosylase [Listeria monocytogenes FSL J1-208] Length = 51 Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRF-DFPHHFSAATRGKKI 50 MPE+PEVE +R L ++ + + + + P F G++I Sbjct: 1 MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEI 51 >gi|291385796|ref|XP_002709338.1| PREDICTED: nei like 2 [Oryctolagus cuniculus] Length = 334 Score = 62.6 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 67/228 (29%), Gaps = 40/228 (17%) Query: 66 GNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFM 125 + V G+ GS + S AK + + + GF+ Sbjct: 128 AERWLQVSFGLFGSIWVNEFSRAKKANK--------RGDWRDPAPRLVLYFGGG---GFL 176 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 + + P+ + F+ + + LL+Q+ +G+GNI Sbjct: 177 AFYNCQMSWSSSPVVRPTSDILSEKFHRGQALEAL-GQAQPVCYTLLDQRYFSGLGNIIK 235 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGS 245 E L+RA + L + L L+ + + + D Sbjct: 236 NEVLYRAGVH------PLSLGSLLSPSCLEALVDHVVEFSTHWLQ------------DKL 277 Query: 246 IGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA-----GRSTFYCTYCQ 288 G Q +Y K P G + + R T++C CQ Sbjct: 278 QGR-QQHPQIYQKEQCPA----GHQVLKQELGPPGGFQRLTWWCPQCQ 320 >gi|300871565|ref|YP_003786438.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] gi|300689266|gb|ADK31937.1| formamidopyrimidine D-glycolase [Brachyspira pilosicoli 95/1000] Length = 217 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 27/213 (12%) Query: 1 MPELPEVEIIRRNLMMVMKNMT----VTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRR 56 M ELP NL+ +K + ++ K + +G+KIIDV R Sbjct: 1 MKELP----YLINLINALKGEICYSYINNVVALDKKYK-----ELEE-VKGQKIIDVLRH 50 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIY 116 Y+ + + +++V LG GSF++ + K I L T+ + V+ Sbjct: 51 GGYMHFQFSQD-AMLVDLGSGGSFVLTENNTYKNA--------IIKLE--TDNGNFFVVD 99 Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKI 176 + ++ + Y + +G +P FN + ++ + N I Sbjct: 100 ESKDKDDATHIIP--IWKDYTTMPQVGYDPLTKQFNYNLFCQLLADNATTVEKLIKNPLI 157 Query: 177 VAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGT 209 ++GIG+ Y L RA ++ KT + + Sbjct: 158 ISGIGDTYGDMILKRASITKRTKTTDINKAKAR 190 >gi|225620719|ref|YP_002721977.1| Formamidopyrimidine-D glycolase [Brachyspira hyodysenteriae WA1] gi|225215539|gb|ACN84273.1| Formamidopyrimidine-D glycolase [Brachyspira hyodysenteriae WA1] Length = 218 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 13/163 (7%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTIS 102 G+KIIDV R Y+ + + +++V LG +GSF++ + Sbjct: 37 EDIEGQKIIDVLRYGGYMHFQFSQD-AMLVDLGPNGSFVLTEDDTYENS----------I 85 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 L T+ + V+ + + ++ P +G +P FN Sbjct: 86 LKLETDHGNFFVVDDGKDKNEITKIIPIWKDSTTMP--QIGYDPLTKQFNYNLFCQLLAD 143 Query: 163 KNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ++ ++ + N I++GIGN+Y L +A ++ KT + + Sbjct: 144 NDTTVEKLIKNPLILSGIGNVYGDMILKKASITKKTKTSDVTK 186 >gi|1196953|gb|AAA88630.1| unknown protein [Synechocystis sp.] Length = 85 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 11/94 (11%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQ 135 M+G + + + P+H V + + + + D R FG + L+ + Sbjct: 1 MTGQLLW----TERDQQRPRHTRVVLHFEGG-----WELRFVDTRTFGKVWLLPAIRPWA 51 Query: 136 Y--PPLRTLGPEPADNSFNAIYLTHQFHKKNSNL 167 L LGPEP F A YL + L Sbjct: 52 EVMTGLGQLGPEPFGADFTAEYLYEKLKSSRRPL 85 >gi|160773093|gb|AAI55026.1| LOC100127771 protein [Xenopus (Silurana) tropicalis] Length = 279 Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 66/190 (34%), Gaps = 17/190 (8%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPH---HFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 V K +V + L + P + ++ G V K L + G +I Sbjct: 16 ARVEKGQSV--VELRGSAVSGTPPSSCYNALSSLTGCSYTGVQTLGKELFMYF-GLKAIR 72 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VH GM+GS + + + + + + D R Sbjct: 73 VHFGMNGSIRLNQAVKKGQENSRPMPVAVLEVQLEKDLICFYESTVDVRNVSEC------ 126 Query: 132 LKYQYPPLRTLGPEPADNSFNAIYLTHQFHK-KNSNLKNALLNQKIVAGIGNIYVCEALW 190 + + L L + + F+ + K K L + LL+Q I+ G+GNI EAL+ Sbjct: 127 -QEKIRFLEEL--DVCSSKFSFSRAECEIKKQKARMLCDILLDQMILPGVGNIIKNEALF 183 Query: 191 RAKL-SPIRK 199 + L SP Sbjct: 184 DSGLRSPSSP 193 >gi|296126263|ref|YP_003633515.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Brachyspira murdochii DSM 12563] gi|296018079|gb|ADG71316.1| DNA glycosylase/AP lyase, H2TH DNA-binding protein [Brachyspira murdochii DSM 12563] Length = 217 Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%) Query: 43 AATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFII-EHTSCAKPIKNPQHNHVTI 101 G+KIIDV R Y+ + + +++V LG +GSF++ E + I + +H Sbjct: 37 EDVEGQKIIDVLRYGGYMHFQFSQD-AMLVDLGPNGSFVLTEDDTYDNSIIKLETDHGNF 95 Query: 102 SLTNNT----NTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT 157 + ++ K I+ D +G +P FN Sbjct: 96 FVVDDGKNKEEMTKIIPIWKDSTTMP-----------------QIGYDPLTKQFNYNLFC 138 Query: 158 HQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 ++ ++ + N I++GIGN+Y L +A ++ KT + + Sbjct: 139 QLLADNDTTVEKLIKNPLILSGIGNVYGDMILKKASITKKTKTSEITK 186 >gi|26326951|dbj|BAC27219.1| unnamed protein product [Mus musculus] Length = 211 Score = 60.3 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 23/159 (14%) Query: 47 GKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHV----TIS 102 G V K L + G ++ +H GM GS +I V + Sbjct: 71 GYVYSGVETLGKELFMYF-GPRALRIHFGMKGSILINPREGENRAGASPALAVQLTRDLI 129 Query: 103 LTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHK 162 +++ + + + R +L + F+ + K Sbjct: 130 CFYDSSVELRNSVESQQRVRVMEEL-----------------DICSPKFSFSRAESEVKK 172 Query: 163 K-NSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + + L + LL+Q+++ G+GNI EAL+ + L P K Sbjct: 173 QGDRMLCDVLLDQRVLPGVGNIIKNEALFDSGLHPAVKV 211 >gi|224535569|ref|ZP_03676108.1| hypothetical protein BACCELL_00433 [Bacteroides cellulosilyticus DSM 14838] gi|224522807|gb|EEF91912.1| hypothetical protein BACCELL_00433 [Bacteroides cellulosilyticus DSM 14838] Length = 95 Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF----PHHFSAATRGKKIIDVSRR 56 M ELPEV + + V+ T+T + K +F F P + GK I+ Sbjct: 1 MLELPEVLTLSKQANDVLSGKTITQVFNATKPHKFTFYSGDPLEYGKLLVGKTILLSKGY 60 Query: 57 AKYLLIELEGNLSIIVHLGMSGSFI 81 ++ L GN+ + + G+S + Sbjct: 61 GMFVDFYLSGNVIMNIGDGVSARYY 85 >gi|294663885|ref|ZP_06729325.1| endonuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606343|gb|EFF49554.1| endonuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 134 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 25/147 (17%) Query: 147 ADNSFNAIYLTHQFHKKNSNLKNALLN-QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQ 205 + ++A + + L L Q I AG+GNI E L R ++ P +L Sbjct: 2 MNPLWDAAQARRKLRAAPAMLAADALLDQTIFAGVGNIIKNEVLHRIRVHPESTVGAL-- 59 Query: 206 NNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLS 265 P L +L+ + + D + + V+ +T P Sbjct: 60 ----PARKLGELVTQARDYSFDFY------------TWKKAFVLKKHYQVHTRTRCP--- 100 Query: 266 NCGQMIRRIVQ---AGRSTFYCTYCQK 289 G ++ AGR F+C CQ+ Sbjct: 101 RDGAPLQYRKHLGKAGRRAFFCEVCQR 127 >gi|169838397|ref|ZP_02871585.1| hypothetical protein cdivTM_15076 [candidate division TM7 single-cell isolate TM7a] Length = 47 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD 36 MPELPEVE IRR L ++ + ++ F Sbjct: 1 MPELPEVETIRRGLQDIITGKKIVQSKVYDSPKSFP 36 >gi|2240043|gb|AAB62328.1| putative formamidopyrimidine-DNA glycosylase [Streptococcus thermophilus] Length = 34 Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLR 34 MPELPEVE +RR L ++ T+ + + + Sbjct: 1 MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMI 34 >gi|3978498|gb|AAC83371.1| formamidopyrimidine-DNA glycosylase [Mastigocladus laminosus] Length = 52 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVT--DICLHRKNLRFDFPHHFSAATRGKKI 50 MPELPEVE +RR L + + D+ LHR + F +GK I Sbjct: 1 MPELPEVETVRRGLNQFTCHQKIVGADVLLHRTIAYPHAVNDFVTGIQGKAI 52 >gi|114658200|ref|XP_001143111.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 441 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 20/136 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 58 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 113 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ ++ Sbjct: 114 RLILSPLPGAQPPQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--RR 166 Query: 112 YRVIYNDPRRFGFMDL 127 + + D RRFG DL Sbjct: 167 LALCFVDIRRFGRWDL 182 >gi|93099914|gb|AAI15710.1| Neil2 protein [Mus musculus] Length = 306 Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 15/173 (8%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + ++ GF Sbjct: 122 DAQRWLEVRFGLFGSIWVNDFSRAKKANKKG--------DWRDPVPRLVLHFSGG---GF 170 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + PP+ + F+ + + LL+Q+ +G+GNI Sbjct: 171 LVFYNCQMSWSPPPVIEPTCDILSEKFHRGQALEALS-QAQPVCYTLLDQRYFSGLGNII 229 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 EAL+RA++ P+ + + ++ L + E K + GS +R Sbjct: 230 KNEALYRARIHPLSLGS---CLSSSSREALVDHVVEFSKDWLRDKFQEGSRMR 279 >gi|119619662|gb|EAW99256.1| nei endonuclease VIII-like 1 (E. coli), isoform CRA_b [Homo sapiens] Length = 465 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 20/136 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + R S+A R I S R K L Sbjct: 87 MPEGPELHLASQFVNEACRALVFGGCVEKSSVSRNPEVPFESSAYR----ISASARGKEL 142 Query: 61 LIELEG---------NLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + L L+++ GMSGSF + + P+H H+ + Sbjct: 143 RLILSPLPGAQPQQEPLALVFRFGMSGSFQLVPRE-----ELPRHAHLRFYTAPPG--PR 195 Query: 112 YRVIYNDPRRFGFMDL 127 + + D RRFG DL Sbjct: 196 LALCFVDIRRFGRWDL 211 >gi|239928563|ref|ZP_04685516.1| DNA glycosylase [Streptomyces ghanaensis ATCC 14672] Length = 93 Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%) Query: 245 SIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 + G VYG+ PCL C IR Q GR T++C CQ Sbjct: 29 TTGLSDPDLFVYGRASRPCL-RCRTPIRLADQGDGSRGRPTYWCPVCQ 75 >gi|92110211|gb|AAI15763.1| Neil2 protein [Mus musculus] Length = 277 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 18/166 (10%) Query: 65 EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGF 124 + + V G+ GS + S AK + + ++ GF Sbjct: 122 DAQRWLEVRFGLFGSIWVNDFSRAKKANKKG--------DWRDPVPRLVLHFSGG---GF 170 Query: 125 MDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIY 184 + + + PP+ + F+ + + LL+Q+ +G+GNI Sbjct: 171 LVFYNCQMSWSPPPVIEPTCDILSEKFHRGQALEALS-QAQPVCYTLLDQRYFSGLGNII 229 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAID 230 EAL+RA++ P+ + L+ + + D + Sbjct: 230 KNEALYRARIHPL------SLGSCLSSSSREALVDHVVEFSKDWLR 269 >gi|282875889|ref|ZP_06284756.1| conserved domain protein [Staphylococcus epidermidis SK135] gi|281294914|gb|EFA87441.1| conserved domain protein [Staphylococcus epidermidis SK135] Length = 74 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 11/64 (17%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-----------HRKNLRFDFPHHFSAATRGKK 49 MPELPEVE ++R + +K+ + + ++ F T G Sbjct: 1 MPELPEVEHVKRGIEPFIKSAKIEKVTFAKNVINGKNNNRETIIKGMELDTFKKLTEGYV 60 Query: 50 IIDV 53 I + Sbjct: 61 IKKL 64 >gi|301632943|ref|XP_002945539.1| PREDICTED: endonuclease VIII-like 2-like [Xenopus (Silurana) tropicalis] Length = 287 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 88/319 (27%), Gaps = 75/319 (23%) Query: 1 MPELPEVEIIRRN--LMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAK 58 MPE P +RR L+ + V + K + +GK+ K Sbjct: 1 MPEGP---TVRRFCSLVSPFVSQNVVKVGGSTKKIAL-------QDLQGKQFRYCQVHGK 50 Query: 59 YLLIELEGNLSIIVHLGMSGS----------------FIIEHTSCAKPIKNPQ------- 95 L +E V +SG+ + I + + ++P+ Sbjct: 51 NLYLEFTTKAVENV---LSGTEDAKEHIDQAGDSQKDYSIIQPTSEEHSESPKAANYSEI 107 Query: 96 HNHVTISLTNNTNTKKYRVIYNDPRRFG-FMDLVETSLKYQYPPLRTLGPEPADNSFNAI 154 H + + ++ D + + + + Sbjct: 108 HLSRWLRFHFGLYGSVRSNEFARAKQANKRGDWRDPTPRKTATF--------TSAAQQDT 159 Query: 155 YLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDIL 214 Y F K+ ++ + + GNI E L+ ++ P L + P + L Sbjct: 160 YFVCLFVFVLEINKSPIIINMVKSNSGNIIKNEILFLEQVHP------LCLGSLLPIEKL 213 Query: 215 YKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRI 274 + L+ D + + + ++ Y C G + + Sbjct: 214 HSLVSHTLHFTSDWLSS---------KMKKEALHYHIYMKEY------CDK--GHKVIKE 256 Query: 275 VQA-----GRSTFYCTYCQ 288 R T++C CQ Sbjct: 257 KLGPPYGIKRLTYFCPVCQ 275 >gi|149625701|ref|XP_001521074.1| PREDICTED: similar to NEIL2 protein, partial [Ornithorhynchus anatinus] Length = 191 Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 31/176 (17%) Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLT-HQFHKKNSNLKNALLNQKIV 177 PR G L + PL G E D S + + + + Sbjct: 27 PRGEGAGCLQRDASLEPGRPLGEKGVESPDTSLTPGMAQPQSLEGGEAPVAEVPMAEA-- 84 Query: 178 AGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLR 237 G NI E L+ A + P+ +L + + L L+ + + A G Sbjct: 85 GGHRNIIKNEVLYLAGIHPLSPGSALSP---SSLETLLDLVLQFGGEWLQAKQQG----- 136 Query: 238 DYVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAG-----RSTFYCTYCQ 288 + + +Y + C G + + R T++C CQ Sbjct: 137 -----------KRQPYRIYRRR---CCPE-GHPVTKQSLGPPGRLRRLTWWCPLCQ 177 >gi|325066952|ref|ZP_08125625.1| formamidopyrimidine-DNA glycosylase [Actinomyces oris K20] Length = 163 Score = 50.2 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 13/118 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + + + RF ++ G+ ++ K+L + Sbjct: 1 MPEGHTIHRLAAALDELYGGQSLRVRSPQGRF---ADGASRLDGQVLLGSQAHGKHLFLP 57 Query: 64 L----------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKK 111 + + +HLG+ G++ + + K Sbjct: 58 FGPRADMSLDDDSVTWLRIHLGLYGAWTFDGDREFTAPHAIGAPRRRVGERGEHALKG 115 >gi|47225855|emb|CAF98335.1| unnamed protein product [Tetraodon nigroviridis] Length = 285 Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 19/132 (14%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE PE+ + + + + + T + + A +I SR K + Sbjct: 1 MPEGPELHLASLYVNKMCQGLIFTGAVRKSEVSKAPDVPFTCEA---YRITAASR-GKEV 56 Query: 61 LIEL-------EGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + L + + I+ GMSG F + + P+H+H+ Sbjct: 57 KLTLTPMKSQGDQPMDIVFRFGMSGYFRLTTED-----ELPKHSHLRFYSNEEPCRV--- 108 Query: 114 VIYNDPRRFGFM 125 + + D R FG Sbjct: 109 LSFVDTRSFGSW 120 >gi|239928562|ref|ZP_04685515.1| DNA glycosylase [Streptomyces ghanaensis ATCC 14672] Length = 54 Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE V R L + +T L P + +A G+ ++DV+ R K+L Sbjct: 1 MPEGDTVRQAARRLHDALAGRVLTRSDLR-------VPKYATADLTGRTVLDVTARGKHL 53 Query: 61 L 61 L Sbjct: 54 L 54 >gi|320532215|ref|ZP_08033080.1| formamidopyrimidine-DNA glycosylase protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320135573|gb|EFW27656.1| formamidopyrimidine-DNA glycosylase protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 173 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 20/168 (11%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIE 63 +PE I R + + ++ RF ++ G+ ++ K+L + Sbjct: 1 MPEGHTIHRLAAALDELYGGQNLRACSPQGRF---ADGASRLDGQVLLGSQAHGKHLFLP 57 Query: 64 LEGN----------LSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYR 113 + +HLG+ GS+ + + K Sbjct: 58 FGPRADMSLDDTSVTWLRIHLGLYGSWTFDGDREFTAPHAIGAPRRRVGERGEHALKGGG 117 Query: 114 VIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFH 161 G DL GP+P + + Sbjct: 118 GSALAGLNGG--DLEPGGQDA-----GAHGPDPDEWEPPEPRGAVRLR 158 >gi|114658220|ref|XP_001143944.1| PREDICTED: similar to NEIL1 protein isoform 6 [Pan troglodytes] Length = 288 Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 19/113 (16%) Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK-- 216 + + ALL+Q+ GIGN E L+R K+ P K RS+++ P L Sbjct: 53 KAFDRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPELTLSQ 112 Query: 217 ----------LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIG--YFQNAFSVYG 257 L++ V + + GG + Y G F+ YG Sbjct: 113 KIRTKLQNPDLLELCHSVPKEVVQLGG---KGYGSESGEEDFAAFRAWLRCYG 162 >gi|7272370|gb|AAA18569.2| formamidopyrimidine DNA N-glycosylase [Synechococcus elongatus PCC 6301] Length = 47 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICL-HRKNLRFDFPHHFSAATR 46 MPELPEVE +RR L T + + + P F A + Sbjct: 1 MPELPEVETVRRGLTQQTLQRVCTGGEVLLSRTIATPTPELFLVALQ 47 >gi|291436888|ref|ZP_06576278.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291339783|gb|EFE66739.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 55 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 256 YGKTGEPCLSNCGQMIRRIVQA----GRSTFYCTYCQ 288 YG+ PCL C IR Q GR T++C CQ Sbjct: 2 YGRASRPCL-RCRTPIRLADQGDGSRGRPTYWCPVCQ 37 >gi|74206872|dbj|BAE33246.1| unnamed protein product [Mus musculus] Length = 326 Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 25/158 (15%) Query: 117 NDPRRFGFMDLVETSLKYQYPPLRTLGPEPA--DNSFNAIYLTHQF-HKKNSNLKNALLN 173 D RRFG D ++Q GP F L + + + ALL+ Sbjct: 52 RDIRRFGHWD---PGGEWQPGR----GPCVLLEYERFRENVLRNLSDKAFDRPICEALLD 104 Query: 174 QKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN--NGTPKDILYK------------LIQ 219 Q+ GIGN E L+R K+ P K R++++ P L L++ Sbjct: 105 QRFFNGIGNYLRAEILYRLKIPPFEKARTVLEALQQCRPSPELTLSQKIKAKLQNPDLLE 164 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYG 257 V + + GG + F+ YG Sbjct: 165 LCHLVPKEVVQLGGKGY-GPERGEEDFAAFRAWLRCYG 201 >gi|326926420|ref|XP_003209398.1| PREDICTED: hypothetical protein LOC100547430 [Meleagris gallopavo] Length = 446 Score = 47.2 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 26/46 (56%) Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQN 206 + + ALLNQK GIGN E L+RAK+ P K R++++ Sbjct: 211 KAFDKPICEALLNQKYFNGIGNYLRAEILYRAKIPPFEKARTVLEA 256 >gi|169835969|ref|ZP_02869157.1| hypothetical protein cdivTM_02456 [candidate division TM7 single-cell isolate TM7a] Length = 52 Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 12/20 (60%), Positives = 14/20 (70%) Query: 1 MPELPEVEIIRRNLMMVMKN 20 MPELPEVE IRR L ++ Sbjct: 1 MPELPEVETIRRGLQDIITG 20 >gi|308162915|gb|EFO65282.1| Hypothetical protein GLP15_4339 [Giardia lamblia P15] Length = 472 Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 11/143 (7%) Query: 64 LEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQH------NHVTISLTNNTNTKKYRVIYN 117 L SI++ LG++G +I + + +K+ H + V ++ T +RV Sbjct: 116 LTIPTSIVIGLGLAG-YINTFLTPEEALKSNAHLLFEASDAVLAICSSRPETMYWRV--G 172 Query: 118 DPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV 177 D D V L Y L L P + ++ + + LL+Q++ Sbjct: 173 DFDHARSPDPVTQYLDYVSKILSKLSHIP--IGLDGSFIVQPKSIFSQPICRLLLSQELF 230 Query: 178 AGIGNIYVCEALWRAKLSPIRKT 200 G+GN E + R + P + Sbjct: 231 NGVGNYLRAEVMHRLLIHPFTPS 253 >gi|169840293|ref|ZP_02873481.1| hypothetical protein cdivTM_24685 [candidate division TM7 single-cell isolate TM7a] Length = 66 Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 2 PELPEVEIIRRNLMMVMKNMT 22 PELPEVE IRR L ++ Sbjct: 23 PELPEVETIRRGLQDIITGKK 43 >gi|167946500|ref|ZP_02533574.1| hypothetical protein Epers_08098 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 44 Score = 45.2 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQ 288 F ++ + G C C I +I Q G+ + C CQ Sbjct: 6 RFQLFRREGLACY-RCSSRIIKINQGGQPCYLCPNCQ 41 >gi|255026403|ref|ZP_05298389.1| hypothetical protein LmonocytFSL_08810 [Listeria monocytogenes FSL J2-003] Length = 28 Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTD 25 MPE+PEVE +R L ++ + Sbjct: 1 MPEMPEVENVRATLQELVPGKKIRS 25 >gi|302554565|ref|ZP_07306907.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] gi|302472183|gb|EFL35276.1| endonuclease VIII/DNA glycosylase [Streptomyces viridochromogenes DSM 40736] Length = 51 Score = 44.9 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 5/37 (13%) Query: 256 YGKTGEPCLSNCGQMIRRIVQAG----RSTFYCTYCQ 288 YG+ PCL C +R Q R T++C CQ Sbjct: 2 YGRAPRPCL-RCRTSVRVADQGDGSRERPTYWCPTCQ 37 >gi|297805248|ref|XP_002870508.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316344|gb|EFH46767.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 108 Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 92 KNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSF 151 +++ + L + + D RR + L+ P+ L P Sbjct: 32 WPSKYSKFLVQLDDG-----LELSITDKRRLAKVRLLANPT--SVSPISELHPNALLEPM 84 Query: 152 NAIYLTHQFHKKNSNLKNALLNQ 174 KK +K LL+Q Sbjct: 85 TVEEFAASLAKKKITIKPLLLDQ 107 >gi|327273853|ref|XP_003221694.1| PREDICTED: endonuclease 8-like 3-like [Anolis carolinensis] Length = 426 Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 5/40 (12%) Query: 252 AFSVYGKTGEPCLSNCGQMIRRIVQA--GRSTFYCTYCQK 289 + VY + P CG I R T++C CQK Sbjct: 80 HYKVYKR---PNCGQCGAKITVCRLGENNRMTYFCPQCQK 116 >gi|241765773|ref|ZP_04763716.1| putative DNA-formamidopyrimidine glycosylase [Acidovorax delafieldii 2AN] gi|241364342|gb|EER59481.1| putative DNA-formamidopyrimidine glycosylase [Acidovorax delafieldii 2AN] Length = 155 Score = 43.3 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 10/90 (11%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYL 60 MPE P + II R + + + R G++I+ + K+ Sbjct: 1 MPEGPSL-IIPRGQAAASAGQAIVRVEGNTSIGR--------QRLAGQRIVALRTWGKHF 51 Query: 61 LIELEGNLSIIVHLGMSGSFIIEHTSCAKP 90 L+EL ++ VH + GS+ I P Sbjct: 52 LVELPT-FTLRVHFLLFGSYRINERKDTPP 80 >gi|290791636|gb|EFD95295.1| hypothetical protein GL50803_115464 [Giardia lamblia ATCC 50803] gi|290791718|gb|EFD95377.1| hypothetical protein GL50803_115465 [Giardia lamblia ATCC 50803] Length = 472 Score = 42.9 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 18/36 (50%) Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + LL+Q++ G+GN EA+ R + P + Sbjct: 218 QPICRLLLSQELFNGVGNYLRAEAMHRLLIHPFTPS 253 >gi|253748058|gb|EET02426.1| Hypothetical protein GL50581_309 [Giardia intestinalis ATCC 50581] Length = 411 Score = 42.2 bits (98), Expect = 0.081, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%) Query: 165 SNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKT 200 + LL+Q++ G+GN E + R L P + Sbjct: 158 QPICRLLLSQELFNGVGNYLRAEIMHRLLLHPFTPS 193 >gi|258567828|ref|XP_002584658.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237906104|gb|EEP80505.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 239 Score = 42.2 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 15/36 (41%) Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD 36 MPEL EV I + + V+ + +L F Sbjct: 1 MPELAEVARIVHYIRKELVGKRVSKVIAKHDDLVFG 36 >gi|328465600|gb|EGF36829.1| hypothetical protein LM1816_06750 [Listeria monocytogenes 1816] Length = 22 Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 1 MPELPEVEIIRRNLMMVMKNMT 22 MPE+PEVE +R L ++ Sbjct: 1 MPEMPEVENVRATLQELVPGKK 22 >gi|297283656|ref|XP_001087999.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Macaca mulatta] Length = 1301 Score = 39.8 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 31/126 (24%) Query: 195 SPIRKTRSLIQNNGTPKDILYKLIQEIQK---VLIDAIDAGGSSLRDYVHIDGSIGYFQN 251 P + Q G + L L++ + + D ++ + G+ + Sbjct: 119 DPEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQ 178 Query: 252 AF------SVY-------GKTGEPCL--------------SNCGQMIRRIVQAG-RSTFY 283 F V+ ++G+P L C ++ + QA RS+ Sbjct: 179 EFLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPFPVCSTFVQELFQAQYRSSLT 238 Query: 284 CTYCQK 289 C +CQK Sbjct: 239 CPHCQK 244 >gi|56696790|ref|YP_167151.1| aminotransferase, class V [Ruegeria pomeroyi DSS-3] gi|56678527|gb|AAV95193.1| aminotransferase, class V [Ruegeria pomeroyi DSS-3] Length = 407 Score = 38.7 bits (89), Expect = 0.97, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 18/147 (12%) Query: 93 NPQHNHVTISLTNNTNTKKYRVIY------NDPRRFGFMDLVETSLKYQYPPL------- 139 P H V + + R DL+ PL Sbjct: 261 GPDHAQVAACAGMADYVDQLAAHHGITATDAAGRGAAVHDLMRAHEVTLLQPLLDAVRDR 320 Query: 140 ---RTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSP 196 R +GP+ A+ + L ++ + L I+AG G+ Y AL + P Sbjct: 321 NSVRLIGPDRAEQRAPTVALA--MNRPGEPVAAELAQHGIMAGGGDFYAVRALAAMGVDP 378 Query: 197 IRKTRSLIQNNGTPKDILYKLIQEIQK 223 ++ L + T KD + +LI+ + + Sbjct: 379 VQGVLRLSFTHYTSKDEIAQLIEALDR 405 >gi|134045416|ref|YP_001096902.1| DNA repair helicase RAD3 [Methanococcus maripaludis C5] gi|132663041|gb|ABO34687.1| DNA repair helicase RAD3 [Methanococcus maripaludis C5] Length = 669 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYC----QK 289 + + + CG +I G +TFYC C QK Sbjct: 126 RPNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQK 161 >gi|45358782|ref|NP_988339.1| putative dinG ATP-dependent helicase [Methanococcus maripaludis S2] gi|45047648|emb|CAF30775.1| putative dinG ATP-dependent helicase [Methanococcus maripaludis S2] Length = 669 Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Query: 258 KTGEPCLSNCGQMIRRIVQAGRSTFYCTYC----QK 289 + + + CG +I G +TFYC C QK Sbjct: 126 RPNKKPVCVCGTKKEKIEFDGNTTFYCPLCLCDYQK 161 >gi|311740725|ref|ZP_07714552.1| L-seryl-tRNA selenium transferase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304245|gb|EFQ80321.1| L-seryl-tRNA selenium transferase [Corynebacterium pseudogenitalium ATCC 33035] Length = 438 Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 3/49 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKK 49 LPEVE R+ L + + + + P + K Sbjct: 25 LPEVESARQRLAEHAIRAIIQGVVTQARRGQLPVSDIPAEIAQRLEQKT 73 >gi|121701695|ref|XP_001269112.1| quinate pathway repressor protein QutR, putative [Aspergillus clavatus NRRL 1] gi|119397255|gb|EAW07686.1| quinate pathway repressor protein QutR, putative [Aspergillus clavatus NRRL 1] Length = 916 Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 20/128 (15%) Query: 138 PLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPI 197 P+RTL P+ AD++F + +K + GIGN +R LSP Sbjct: 659 PIRTL-PDGADDAFETSLYFEKSRA--GPIKALHGDNTDWIGIGN------CFRWGLSPA 709 Query: 198 ---RKTRS--LIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNA 252 R + + +I G + +Y +I + + ++ + H Y + Sbjct: 710 NAIRPSSTGLVIGAGGMARAAVYAMIHLGVQNIFVYNRTLANAEKLAHH------YNRQN 763 Query: 253 FSVYGKTG 260 +G++G Sbjct: 764 LQAHGRSG 771 >gi|115379469|ref|ZP_01466566.1| linear gramicidin synthetase subunit D [Stigmatella aurantiaca DW4/3-1] gi|115363520|gb|EAU62658.1| linear gramicidin synthetase subunit D [Stigmatella aurantiaca DW4/3-1] Length = 662 Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 57/198 (28%), Gaps = 22/198 (11%) Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 L +SG + + +H + + + R+ +DL Sbjct: 73 LRLSGQLNVSALERSLGEIVARHEALRTTFAQDEGLPVQRIGEAGAVPLEVVDLSRLESA 132 Query: 134 YQYPPLRTLGPEPADNSFN---AIYLTHQFHKKNSNLKNALLNQKIVAG----------- 179 + L+ LG E A F+ L + K LL + Sbjct: 133 ARGAELQRLGSEEARKPFDLSRGPLLRARLLKLEPTEHVLLLTMHHIVSDAWSVGVCFRE 192 Query: 180 IGNIYVCEALWRAKLSPIRKTR------SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +G +Y +L + SP+ +L Q ++L K + + L Sbjct: 193 LGVLYSAFSLGQP--SPLTPLAVQYVDYTLWQRQWLQGEVLDKQLAYWKTQLAGVEPLDL 250 Query: 234 SSLRDYVHIDGSIGYFQN 251 + R + G+ G Sbjct: 251 KTDRPRGPMQGARGALHR 268 >gi|310822095|ref|YP_003954453.1| grsb-like gramicidin s synthetase 2 [Stigmatella aurantiaca DW4/3-1] gi|309395167|gb|ADO72626.1| GrsB-like Gramicidin S synthetase 2 [Stigmatella aurantiaca DW4/3-1] Length = 2436 Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 57/198 (28%), Gaps = 22/198 (11%) Query: 74 LGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLK 133 L +SG + + +H + + + R+ +DL Sbjct: 73 LRLSGQLNVSALERSLGEIVARHEALRTTFAQDEGLPVQRIGEAGAVPLEVVDLSRLESA 132 Query: 134 YQYPPLRTLGPEPADNSFN---AIYLTHQFHKKNSNLKNALLNQKIVAG----------- 179 + L+ LG E A F+ L + K LL + Sbjct: 133 ARGAELQRLGSEEARKPFDLSRGPLLRARLLKLEPTEHVLLLTMHHIVSDAWSVGVCFRE 192 Query: 180 IGNIYVCEALWRAKLSPIRKTR------SLIQNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 +G +Y +L + SP+ +L Q ++L K + + L Sbjct: 193 LGVLYSAFSLGQP--SPLTPLAVQYVDYTLWQRQWLQGEVLDKQLAYWKTQLAGVEPLDL 250 Query: 234 SSLRDYVHIDGSIGYFQN 251 + R + G+ G Sbjct: 251 KTDRPRGPMQGARGALHR 268 >gi|73663734|ref|YP_302515.1| acyl-CoA dehydrogenase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72496249|dbj|BAE19570.1| putative acyl-CoA dehydrogenase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 402 Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%) Query: 200 TRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAFSVYGKT 259 + L + L +++E + ++ + DY G + YFQN G+ Sbjct: 20 AKDLTEGEVKLLKQLNDMLEEKYRDSVNEHWLNATEPEDYFEELGKLNYFQNPLLFEGRE 79 Query: 260 GE 261 GE Sbjct: 80 GE 81 >gi|296120767|ref|YP_003628545.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] gi|296013107|gb|ADG66346.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] Length = 128 Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 10/85 (11%) Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238 G+G+ E ++ ++ P RK R L + + ++ L +I S LRD Sbjct: 24 GVGDFRAFEICFKLEIDPQRKARELSDDELARISAMLDKDYLVEGSLRRSIQQNISRLRD 83 Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPC 263 G + G PC Sbjct: 84 IQSYRGLR----------HRRGLPC 98 >gi|261367777|ref|ZP_05980660.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] gi|282570575|gb|EFB76110.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] Length = 123 Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 11/90 (12%) Query: 175 KIVAGIGNIYVCEALWRAKLSPIRKTRSLI-QNNGTPKDILYKLIQEIQKVLIDAIDAGG 233 V GIG E L ++P + + L +D + K + I G Sbjct: 20 TYVYGIGQSTADEILAGTGINPDTRVKDLTSDEEAKIRDYIDK----------NNIMVEG 69 Query: 234 SSLRDYVHIDGSIGYFQNAFSVYGKTGEPC 263 R+ + Q V + G PC Sbjct: 70 DLRRNVALDIKRLTEIQCYRGVRHRKGLPC 99 >gi|315506221|ref|YP_004085108.1| atpase aaa-2 domain protein [Micromonospora sp. L5] gi|315412840|gb|ADU10957.1| ATPase AAA-2 domain protein [Micromonospora sp. L5] Length = 849 Score = 37.5 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 54/205 (26%), Gaps = 28/205 (13%) Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 F+ + + + P H + +T ++ + RR L + Sbjct: 15 FLARYFGRGEGGRRPAH---RVDITRLMTADAREMLADAARRAAQKH--SNDLDTDHLLW 69 Query: 140 RTLGPEPADN-----SFNAIYLTHQFHKK---------------NSNLKNALLNQKIVA- 178 L EP + + L + K ALL+ ++ Sbjct: 70 AALQREPLRDLVRRAGADPDALLGALGGRGEGAPRGEVPPNLSLTPAAKRALLDAHQLSR 129 Query: 179 GIG-NIYVCE-ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +G N E L L+P ++ + L E D G +L Sbjct: 130 AMGANYIGPEHILMALPLNPESPAGRMLAAGRIQPESLQAASAERGAANAPRPDRGTPTL 189 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGE 261 Y + V G+ E Sbjct: 190 DQYGQDLTELARMDQIDPVIGRADE 214 >gi|302867374|ref|YP_003836011.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302570233|gb|ADL46435.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029] Length = 849 Score = 37.5 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 54/205 (26%), Gaps = 28/205 (13%) Query: 80 FIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPL 139 F+ + + + P H + +T ++ + RR L + Sbjct: 15 FLARYFGRGEGGRRPAH---RVDITRLMTADAREMLADAARRAAQKH--SNDLDTDHLLW 69 Query: 140 RTLGPEPADN-----SFNAIYLTHQFHKK---------------NSNLKNALLNQKIVA- 178 L EP + + L + K ALL+ ++ Sbjct: 70 AALQREPLRDLVRRAGADPDALLGALGGRGEGAPRGEVPPNLSLTPAAKRALLDAHQLSR 129 Query: 179 GIG-NIYVCE-ALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSL 236 +G N E L L+P ++ + L E D G +L Sbjct: 130 AMGANYIGPEHILMALPLNPESPAGRMLAAGRIQPESLQAASAERGAANAPRPDRGTPTL 189 Query: 237 RDYVHIDGSIGYFQNAFSVYGKTGE 261 Y + V G+ E Sbjct: 190 DQYGQDLTELARMDQIDPVIGRADE 214 >gi|297484112|ref|XP_002694109.1| PREDICTED: hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Bos taurus] gi|296479202|gb|DAA21317.1| hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Bos taurus] Length = 858 Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 21/121 (17%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG----KKIIDVSRRAKYLLIELEGNLSI 70 + + V L +P A G + V R K+ Sbjct: 604 APLPSDFQVLRAKYRESPLISAWPEELIARLAGDIEAAAVRAVRRFGKF----------- 652 Query: 71 IVHLGMSGSF----IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 HL +SG + + + H H+ + + + Sbjct: 653 --HLALSGGSSPVALFQQLATGHYSFPWAHTHLWLVDERCVPLWDPESNFQGLQTHLLQH 710 Query: 127 L 127 + Sbjct: 711 V 711 >gi|302692490|ref|XP_003035924.1| hypothetical protein SCHCODRAFT_105517 [Schizophyllum commune H4-8] gi|300109620|gb|EFJ01022.1| hypothetical protein SCHCODRAFT_105517 [Schizophyllum commune H4-8] Length = 740 Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 14/91 (15%) Query: 176 IVAGIGNIYVCEALWRAKLSPIRKTRSLIQNN-GTPKDILYKLIQEIQKVLIDAIDAGGS 234 + G+G E + A L P +L + D L +LI ++DA + Sbjct: 244 LFPGLGVYTTSEVWFSAGLPP-----NLTEEELCDEPDRLARLISAYYHFVVDAHPRMKA 298 Query: 235 SLRDYVHI--------DGSIGYFQNAFSVYG 257 +R Y+H Y Q VYG Sbjct: 299 FIRPYLHGYLLAVDAKRDRRAYEQGCLRVYG 329 >gi|119908393|ref|XP_615112.3| PREDICTED: hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Bos taurus] Length = 858 Score = 37.2 bits (85), Expect = 2.6, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 21/121 (17%) Query: 15 MMVMKNMTVTDICLHRKNLRFDFPHHFSAATRG----KKIIDVSRRAKYLLIELEGNLSI 70 + + V L +P A G + V R K+ Sbjct: 604 APLPSDFQVLRAKYRESPLISAWPEELIARLAGDIEAAAVRAVRRFGKF----------- 652 Query: 71 IVHLGMSGSF----IIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMD 126 HL +SG + + + H H+ + + + Sbjct: 653 --HLALSGGSSPVALFQQLATGHYSFPWAHTHLWLVDERCVPLWDPESNFQGLQTHLLQH 710 Query: 127 L 127 + Sbjct: 711 V 711 >gi|10640760|emb|CAC12538.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 588 Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 33/193 (17%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 ++I+ + + I + + H +G +I + + +T Sbjct: 64 LRKTISDRRIVGIRQ------INFDRVVEFTFH---TGQKLILELFREGNLIATDGDRIT 114 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L PR++ DL E YQ P +P +S + ++ Sbjct: 115 FVLR--------------PRKWKNRDL-EVGGTYQPPS----SFDP--SSASPEDMSKII 153 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++N+ L + + G E L+RA + R + + +L +L++E Sbjct: 154 SGSSANIVQTLATRLNLGG---ELAEEILYRAGIDKETPARDAAGRSADIRSMLDELLKE 210 Query: 221 IQKVLIDAIDAGG 233 + G Sbjct: 211 SLANRSYYYKSQG 223 >gi|16082623|ref|NP_394872.1| RNA-binding protein snRNP [Thermoplasma acidophilum DSM 1728] Length = 601 Score = 37.2 bits (85), Expect = 2.7, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 33/193 (17%) Query: 41 FSAATRGKKIIDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVT 100 ++I+ + + I + + H +G +I + + +T Sbjct: 77 LRKTISDRRIVGIRQ------INFDRVVEFTFH---TGQKLILELFREGNLIATDGDRIT 127 Query: 101 ISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQF 160 L PR++ DL E YQ P +P +S + ++ Sbjct: 128 FVLR--------------PRKWKNRDL-EVGGTYQPPS----SFDP--SSASPEDMSKII 166 Query: 161 HKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQE 220 ++N+ L + + G E L+RA + R + + +L +L++E Sbjct: 167 SGSSANIVQTLATRLNLGG---ELAEEILYRAGIDKETPARDAAGRSADIRSMLDELLKE 223 Query: 221 IQKVLIDAIDAGG 233 + G Sbjct: 224 SLANRSYYYKSQG 236 >gi|159036740|ref|YP_001535993.1| ribokinase-like domain-containing protein [Salinispora arenicola CNS-205] gi|157915575|gb|ABV97002.1| PfkB domain protein [Salinispora arenicola CNS-205] Length = 296 Score = 37.2 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 26/153 (16%) Query: 3 ELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDFPHHFSA------------ATRGKKI 50 E+P VE + V+ T + L+ R P F+A A G+ Sbjct: 140 EIP-VETVTE--AAVVARAAGTRVVLNAAPARTVPPELFAATDVLVVNESEALAFTGRG- 195 Query: 51 IDVSRRAKYLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTK 110 RA L+EL + LGMSG++ + + V + + + Sbjct: 196 ---EPRA---LLELTPRAVLT--LGMSGAWYGDRDGECVRVPAVPVEAVDSTAAGDAFSA 247 Query: 111 KYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLG 143 V + + R +D V + +R LG Sbjct: 248 ALAVGWGEGRDL--VDAVRWATAAGAACVRRLG 278 >gi|162148842|ref|YP_001603303.1| protease II [Gluconacetobacter diazotrophicus PAl 5] gi|161787419|emb|CAP57014.1| putative protease II [Gluconacetobacter diazotrophicus PAl 5] Length = 695 Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 13/137 (9%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R+L+ + +TD +L + + A +++ ++L E + Sbjct: 316 RDLVPHLPGRYITDCMAFSGHLVWRERRDANTALVVRRVDGTE----HVLSSDEDAYVLS 371 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-----YNDPRRFGFMD 126 SGSF + ++P + ++ T+ +DPR + Sbjct: 372 F----SGSFEYDTRELRYVYQSPTTPRQWYAYDMDSRTRHLLKTQEVPSGHDPRDYRCWR 427 Query: 127 LVETSLKYQYPPLRTLG 143 L T+L P+ LG Sbjct: 428 LTATALDGTQVPITVLG 444 >gi|209545410|ref|YP_002277639.1| oligopeptidase B [Gluconacetobacter diazotrophicus PAl 5] gi|209533087|gb|ACI53024.1| Oligopeptidase B [Gluconacetobacter diazotrophicus PAl 5] Length = 695 Score = 36.8 bits (84), Expect = 3.4, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 13/137 (9%) Query: 12 RNLMMVMKNMTVTDICLHRKNLRFDFPHHFSAATRGKKIIDVSRRAKYLLIELEGNLSII 71 R+L+ + +TD +L + + A +++ ++L E + Sbjct: 316 RDLVPHLPGRYITDCMAFSGHLVWRERRDANTALVVRRVDGTE----HVLSSDEDAYVLS 371 Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVI-----YNDPRRFGFMD 126 SGSF + ++P + ++ T+ +DPR + Sbjct: 372 F----SGSFEYDTRELRYVYQSPTTPRQWYAYDMDSRTRHLLKTQEVPSGHDPRDYRCWR 427 Query: 127 LVETSLKYQYPPLRTLG 143 L T+L P+ LG Sbjct: 428 LTATALDGTQVPITVLG 444 >gi|158312015|ref|YP_001504523.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] gi|158107420|gb|ABW09617.1| formamidopyrimidine-DNA glycosylase [Frankia sp. EAN1pec] Length = 26 Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Query: 256 YGKTGEPCLSNCGQMIRRIVQAGRST 281 +G+ G PC CG +R + A RS Sbjct: 2 HGQAGLPC-PRCGDTVREVSFADRSL 26 >gi|108761573|ref|YP_631522.1| 30S ribosomal protein S13 [Myxococcus xanthus DK 1622] gi|123374507|sp|Q1D751|RS13_MYXXD RecName: Full=30S ribosomal protein S13 gi|108465453|gb|ABF90638.1| ribosomal protein S13 [Myxococcus xanthus DK 1622] Length = 127 Score = 36.8 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 168 KNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYK--------LIQ 219 K A+++ + + GIGN + + A + P +T+ L + + + L + Sbjct: 13 KRAVISLQYIYGIGNKSAQDIIAAAGIDPTTRTKDLTEEQARKIREIIEASYKVEGDLRR 72 Query: 220 EIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQNAF 253 E+ + +D G R H G Q Sbjct: 73 EVTMNIKRLMDLGCY--RGLRHRKGLPVRGQRTH 104 >gi|270308440|ref|YP_003330498.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270154332|gb|ACZ62170.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 556 Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%) Query: 1 MPELPE-VEIIRRNLMMV 17 M ELPE VE + R L Sbjct: 480 MAELPEIVETVARTLEPH 497 >gi|57233947|ref|YP_181982.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|109894986|sp|Q3Z717|SYR_DEHE1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57224395|gb|AAW39452.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 556 Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%) Query: 1 MPELPE-VEIIRRNLMMV 17 M ELPE VE + R L Sbjct: 480 MAELPEIVETVARTLEPH 497 >gi|229488688|ref|ZP_04382554.1| f420-dependent oxidoreductase family protein [Rhodococcus erythropolis SK121] gi|229324192|gb|EEN89947.1| f420-dependent oxidoreductase family protein [Rhodococcus erythropolis SK121] Length = 281 Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 10/126 (7%) Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE---PADNS 150 P+H H+ +S ++ + + +D V LG P ++ Sbjct: 34 PEHTHIPVSRDSDHPGTQSAELPDDRYMRTLDPWVALGTAASVTSTIRLGTSVALPLEH- 92 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + I L + L + ++V G+G + E L + P ++ +L + Sbjct: 93 -DPITLAKTIASLDH-----LSDGRVVFGVGFGWNAEELADHGVPPNKRRTALREYLEAM 146 Query: 211 KDILYK 216 ++ K Sbjct: 147 GELWSK 152 >gi|329849471|ref|ZP_08264317.1| DNA polymerase III, subunits gamma and tau [Asticcacaulis biprosthecum C19] gi|328841382|gb|EGF90952.1| DNA polymerase III, subunits gamma and tau [Asticcacaulis biprosthecum C19] Length = 602 Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 72 VHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETS 131 VH+ +G+F + +P P H + T + R DL Sbjct: 177 VHMLSTGAFNALLKTLEEP---PPHAKFIFATTEIRKVPVTIL-----SRCQRFDLRRVE 228 Query: 132 LKYQYPPLRTL-GPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG-----IGNIYV 185 + P L + G E +A+ L + + + +LL+Q +V G +G V Sbjct: 229 PETLTPHLEKICGLEGVRIDADAVALIARAAEGSVRDSLSLLDQALVQGEAGEIVGAEVV 288 Query: 186 CEALWRA 192 + L A Sbjct: 289 RDMLGLA 295 >gi|255324421|ref|ZP_05365538.1| L-seryl-tRNA selenium transferase [Corynebacterium tuberculostearicum SK141] gi|255298327|gb|EET77627.1| L-seryl-tRNA selenium transferase [Corynebacterium tuberculostearicum SK141] Length = 438 Score = 36.4 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 3/49 (6%) Query: 4 LPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFDF---PHHFSAATRGKK 49 LPEVE R+ L + + + P + K Sbjct: 25 LPEVESARQRLAEHAIRAIIQGAVTQARRGQLPVSDIPAEIAQRLEQKT 73 >gi|226308352|ref|YP_002768312.1| oxidoreductase [Rhodococcus erythropolis PR4] gi|226187469|dbj|BAH35573.1| putative oxidoreductase [Rhodococcus erythropolis PR4] Length = 281 Score = 36.4 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 10/126 (7%) Query: 94 PQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKYQYPPLRTLGPE---PADNS 150 P+H H+ +S ++ + + +D V LG P ++ Sbjct: 34 PEHTHIPVSRDSDHPGTQSAELPDDRYMRTLDPWVALGTAASVTSTIRLGTSVALPLEH- 92 Query: 151 FNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVCEALWRAKLSPIRKTRSLIQNNGTP 210 + I L + L + ++V G+G + E L + P ++ +L + Sbjct: 93 -DPITLAKTIASLDH-----LSDGRVVFGVGFGWNAEELADHGVPPNKRRTALREYLEAM 146 Query: 211 KDILYK 216 ++ K Sbjct: 147 GELWSK 152 >gi|126460501|ref|YP_001056779.1| methenyltetrahydrofolate cyclohydrolase [Pyrobaculum calidifontis JCM 11548] gi|158705765|sp|A3MXE6|FOLD_PYRCJ RecName: Full=Bifunctional protein FolD; Includes: RecName: Full=Methylenetetrahydrofolate dehydrogenase; Includes: RecName: Full=Methenyltetrahydrofolate cyclohydrolase gi|126250222|gb|ABO09313.1| Methenyltetrahydrofolate cyclohydrolase [Pyrobaculum calidifontis JCM 11548] Length = 308 Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 24/152 (15%) Query: 76 MSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND-------PRRFG---FM 125 MSG + K HV + K ++ ND RR+ Sbjct: 1 MSGK------PLHEKTKEWARRHVRLLEEVGVTPKLAVLLLNDDPVELETQRRYVSLKAR 54 Query: 126 DLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYV 185 D+ E + + L + PE S A+YL + ++++ + QK V +V Sbjct: 55 DVREVGGEVEIYELVDVPPE--RRSKEALYLIERLNRRDDVTGILI--QKPVP----PFV 106 Query: 186 CEALWRAKLSPIRKTRSLIQNNGTPKDILYKL 217 E L +LSP + +L N L+ L Sbjct: 107 DEDLLFQRLSPEKDVDALTPENKKRLLALFDL 138 >gi|283778044|ref|YP_003368799.1| excinuclease ABC, A subunit [Pirellula staleyi DSM 6068] gi|283436497|gb|ADB14939.1| excinuclease ABC, A subunit [Pirellula staleyi DSM 6068] Length = 955 Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 17/148 (11%) Query: 144 PEPADNSFNAIYLTHQFHKKNSNLKNALLN----QKIV----AGIG-NIYVCEALWRAKL 194 P+P S A + + NLKN L+ Q +V +G G + + L+ Sbjct: 6 PQPTSRSEQAARVIRIRGARTHNLKNIDLDIPRDQLVVITGKSGSGKSSLAFDTLFAEGQ 65 Query: 195 SPIRKTRSLIQNNGTPKDILYK----LIQEIQKVLIDAIDAGGSSLRDYVHIDGSIGYFQ 250 + SL + L + LI+ +Q + G R V I F Sbjct: 66 R--QYIESLSTYARQFLNQLERPDVDLIEGLQPTICIDQRPGVQGSRSTVATSTEIYDFL 123 Query: 251 NAFSVYGKTGEPCLSNCGQMIRRIVQAG 278 Y + GE C CGQ IR+ Sbjct: 124 RLL--YARLGEICCHGCGQPIRQQSAEQ 149 >gi|294664432|ref|ZP_06729787.1| filamentous hemagglutinin-related protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605801|gb|EFF49097.1| filamentous hemagglutinin-related protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 3403 Score = 36.0 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 15/199 (7%) Query: 75 GMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDPRRFGFMDLVETSLKY 134 G++G F + A N +S+T NT P + V+ L Sbjct: 3012 GLTGQFTNVVSDYAFIDPNVSTTATALSVTFGRNTVGMVDAVTTPNQQSAAAAVD-GLPN 3070 Query: 135 QYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIV-AGIGN---------IY 184 P + + P D + +++ ALL+ + + +GIGN + Sbjct: 3071 TSPIYQAVVRLPDDPEAVRTAFASLSGESHASTATALLDSRFLNSGIGNHLRGDSQDTLV 3130 Query: 185 VCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDYVHIDG 244 +W S + ++ + ++ ++ +D Sbjct: 3131 GDTTVWITGRSLPNRVDGDANAVSVRREDNGVMAGAERRFGERSVVGIAVGNQDIESWSR 3190 Query: 245 SIGYFQN----AFSVYGKT 259 G + VYG+ Sbjct: 3191 EWGDRADVDGTHAGVYGRA 3209 >gi|256390722|ref|YP_003112286.1| DNA protecting protein DprA [Catenulispora acidiphila DSM 44928] gi|256356948|gb|ACU70445.1| DNA protecting protein DprA [Catenulispora acidiphila DSM 44928] Length = 600 Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 3/90 (3%) Query: 127 LVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAGIGNIYVC 186 L+ T L LG + A+ + A + + + +L+ +AG G + Sbjct: 502 LLVTRAAEVVEHLGDLGADLAEPTTTARTSSRRPRDSLDPIAARVLDALPIAGRGTLDTV 561 Query: 187 EALWRAKLSP---IRKTRSLIQNNGTPKDI 213 EA A L P L +D Sbjct: 562 EAALAAGLEPRAVHAALGRLTTAGWVDRDE 591 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.154 0.534 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,716,047,834 Number of Sequences: 14124377 Number of extensions: 243398703 Number of successful extensions: 711619 Number of sequences better than 10.0: 2866 Number of HSP's better than 10.0 without gapping: 4711 Number of HSP's successfully gapped in prelim test: 637 Number of HSP's that attempted gapping in prelim test: 686067 Number of HSP's gapped (non-prelim): 5748 length of query: 289 length of database: 4,842,793,630 effective HSP length: 138 effective length of query: 151 effective length of database: 2,893,629,604 effective search space: 436938070204 effective search space used: 436938070204 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 81 (35.6 bits)