PSIBLAST alignment of GI: 254780625 and protein with PDB id: 1l1t
>gi|21730608|pdb|1L1T|A Chain A, Mutm (Fpg) Bound To Abasic-Site Containing Dna Length = 274
>gi|21730611|pdb|1L1Z|A Chain A, Mutm (Fpg) Covalent-Dna Intermediate Length = 274
>gi|21730614|pdb|1L2B|A Chain A, Mutm (Fpg) Dna End-Product Structure Length = 274
>gi|21730618|pdb|1L2C|A Chain A, Mutm (Fpg)-Dna Estranged Thymine Mismatch Recognition Complex Length = 274
Score = 212 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 1 MPELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAK 58
MPELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K
Sbjct: 1 MPELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGK 60
Query: 59 YLLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYND 118
+L L ++I HL M G + + H HV T+ + + Y D
Sbjct: 61 FLKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRD 110
Query: 119 PRRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVA 178
R+FG M + + PPL LGPEP +F+ L + K ++K LL+Q +VA
Sbjct: 111 VRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVA 170
Query: 179 GIGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRD 238
G GNIYV E+L+RA + P R SL + +L +E+ + +A+ GGS++R
Sbjct: 171 GFGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGSTVRT 224
Query: 239 YVHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289
YV+ G G FQ+ VYG+ G PC CG I + V AGR T YC CQ+
Sbjct: 225 YVNTQGEAGTFQHHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 274