PSIBLAST alignment of GI: 254780625 and protein with PDB id: 3go8
>gi|281307047|pdb|3GO8|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog) Lesion In Ec3-Loop Deletion Complex Length = 257
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 35/290 (12%)
Query: 2 PELPEVEIIRRNLMMVMKNMTVTDICLHRKNLRFD--FPHHFSAATRGKKIIDVSRRAKY 59
PELPEVE IRR L+ ++ T+ D+ + N+ F+A G+ + + RR K+
Sbjct: 1 PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKF 60
Query: 60 LLIELEGNLSIIVHLGMSGSFIIEHTSCAKPIKNPQHNHVTISLTNNTNTKKYRVIYNDP 119
L L ++I HL M G + + H HV T+ + + Y D
Sbjct: 61 LKF-LLDRDALISHLRMEGRYAVASALEPLEP----HTHVVFCFTDGS-----ELRYRDV 110
Query: 120 RRFGFMDLVETSLKYQYPPLRTLGPEPADNSFNAIYLTHQFHKKNSNLKNALLNQKIVAG 179
R+FG M + + PPL LGPEP +F+ L + K ++K LL+ +VAG
Sbjct: 111 RKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAG 170
Query: 180 IGNIYVCEALWRAKLSPIRKTRSLIQNNGTPKDILYKLIQEIQKVLIDAIDAGGSSLRDY 239
GNIYV E+L+RA + P R SL + +L +E+ + +A+ GG+
Sbjct: 171 FGNIYVDESLFRAGILPGRPAASLSSKE------IERLHEEMVATIGEAVMKGGN----- 219
Query: 240 VHIDGSIGYFQNAFSVYGKTGEPCLSNCGQMIRRIVQAGRSTFYCTYCQK 289
+ VYG+ G PC CG I + V AGR T YC CQ+
Sbjct: 220 -----------HHLYVYGRQGNPC-KRCGTPIEKTVVAGRGTHYCPRCQR 257